HEADER OXIDOREDUCTASE 17-OCT-14 4WPD TITLE X-RAY CRYSTAL STRUCTURE OF CYP119 COMPLEXED WITH 4-(4-FLOUROPHENYL)- TITLE 2 1H-IMIDAZOLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME P450 119; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PEROXIDASE; COMPND 5 EC: 1.14.-.-,1.11.1.7; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS ACIDOCALDARIUS; SOURCE 3 ORGANISM_TAXID: 330779; SOURCE 4 STRAIN: ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770; SOURCE 5 GENE: CYP119, SACI_2081; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: DH5 ALPHA; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PCWORI KEYWDS CYTOCHROME P450, 4-(4-FLOUROPHENYL)-1H-IMIDAZOLE LIGAND BOUND, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.MADRONA REVDAT 4 27-DEC-23 4WPD 1 REMARK LINK REVDAT 3 25-DEC-19 4WPD 1 REMARK REVDAT 2 20-SEP-17 4WPD 1 SOURCE REMARK REVDAT 1 18-FEB-15 4WPD 0 JRNL AUTH D.BASUDHAR,Y.MADRONA,S.KANDEL,J.N.LAMPE, JRNL AUTH 2 P.ORTIZ DE MONTELLANO JRNL TITL TWO DIMENTIONAL NMR AND X-RAY ANALYSIS OF CYP119 LIGAND JRNL TITL 2 DEPENDENT CONFORMATIONAL DYNAMICS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.900 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 54418 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.680 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.4261 - 5.9955 0.99 3689 139 0.1559 0.1582 REMARK 3 2 5.9955 - 4.7621 0.98 3657 138 0.1497 0.1869 REMARK 3 3 4.7621 - 4.1611 0.98 3682 145 0.1305 0.1424 REMARK 3 4 4.1611 - 3.7811 0.98 3680 142 0.1267 0.1504 REMARK 3 5 3.7811 - 3.5103 0.98 3707 134 0.1319 0.1557 REMARK 3 6 3.5103 - 3.3035 0.98 3657 142 0.1477 0.1945 REMARK 3 7 3.3035 - 3.1382 0.98 3647 144 0.1554 0.2097 REMARK 3 8 3.1382 - 3.0016 0.98 3668 141 0.1629 0.1801 REMARK 3 9 3.0016 - 2.8861 0.98 3659 141 0.1578 0.2529 REMARK 3 10 2.8861 - 2.7866 0.98 3722 137 0.1640 0.2320 REMARK 3 11 2.7866 - 2.6995 0.98 3633 138 0.1595 0.2061 REMARK 3 12 2.6995 - 2.6223 0.98 3703 142 0.1535 0.2402 REMARK 3 13 2.6223 - 2.5533 0.98 3657 138 0.1600 0.2466 REMARK 3 14 2.5533 - 2.4910 0.97 3673 145 0.1570 0.1785 REMARK 3 15 2.4910 - 2.4344 0.98 3638 135 0.1588 0.2177 REMARK 3 16 2.4344 - 2.3826 0.98 3655 142 0.1562 0.1942 REMARK 3 17 2.3826 - 2.3350 0.97 3609 142 0.1615 0.1913 REMARK 3 18 2.3350 - 2.2909 0.97 3682 141 0.1685 0.2429 REMARK 3 19 2.2909 - 2.2500 0.98 3652 143 0.1701 0.2574 REMARK 3 20 2.2500 - 2.2119 0.97 3622 142 0.1773 0.2045 REMARK 3 21 2.2119 - 2.1762 0.98 3629 138 0.1816 0.2612 REMARK 3 22 2.1762 - 2.1427 0.97 3657 140 0.1762 0.2135 REMARK 3 23 2.1427 - 2.1112 0.97 3641 137 0.1826 0.2657 REMARK 3 24 2.1112 - 2.0815 0.97 3681 139 0.1873 0.2009 REMARK 3 25 2.0815 - 2.0534 0.97 3622 137 0.1933 0.2764 REMARK 3 26 2.0534 - 2.0267 0.98 3603 139 0.1952 0.2192 REMARK 3 27 2.0267 - 2.0010 0.92 3447 130 0.2037 0.2493 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.820 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.037 6340 REMARK 3 ANGLE : 1.036 8600 REMARK 3 CHIRALITY : 0.042 929 REMARK 3 PLANARITY : 0.005 1094 REMARK 3 DIHEDRAL : 13.452 2407 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WPD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000203790. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5-5.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.127 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54418 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 38.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.42200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: WELL SOLUTION CONTAINED: 2% PEG 8K, REMARK 280 400 MM MGCL2 AND 100 MM LICL2 ADDITIVE CONTAINED: 1.4 AMMONIUM REMARK 280 SULFATE, 80 MM SODIUM ACETATE, PH 4.5, 20 MM SODIUM ACETATE PH REMARK 280 5.6, 20% GLYCEROL, AND 200 MM NACL, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.40050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.35750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.72900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.35750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.40050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.72900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 368 REMARK 465 GLU B 368 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 108 NH2 ARG B 337 2.03 REMARK 500 O HOH A 839 O HOH B 892 2.06 REMARK 500 O HOH A 815 O HOH A 820 2.09 REMARK 500 NH1 ARG A 113 O TYR B 16 2.09 REMARK 500 O HOH B 845 O HOH B 850 2.10 REMARK 500 O HOH B 685 O HOH B 764 2.12 REMARK 500 O HOH A 704 O HOH A 783 2.12 REMARK 500 O HOH B 861 O HOH B 863 2.14 REMARK 500 O HOH A 696 O HOH A 788 2.15 REMARK 500 O HOH A 783 O HOH A 807 2.17 REMARK 500 O HOH B 573 O HOH B 753 2.17 REMARK 500 O HOH B 780 O HOH B 802 2.17 REMARK 500 O HOH A 750 O HOH A 818 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 577 O HOH B 521 4545 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 19 -53.00 -125.64 REMARK 500 THR A 70 51.25 -115.26 REMARK 500 GLU A 114 124.71 -170.50 REMARK 500 LEU A 121 -55.38 -123.51 REMARK 500 ASN B 19 -47.02 -133.27 REMARK 500 THR B 70 51.43 -111.73 REMARK 500 GLU B 114 129.18 -175.82 REMARK 500 LEU B 121 -56.77 -122.35 REMARK 500 ILE B 161 95.59 54.67 REMARK 500 LEU B 164 -74.76 -89.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 863 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH B 734 DISTANCE = 6.70 ANGSTROMS REMARK 525 HOH B 875 DISTANCE = 7.06 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 402 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 317 SG REMARK 620 2 HEM A 402 NA 95.4 REMARK 620 3 HEM A 402 NB 86.6 89.8 REMARK 620 4 HEM A 402 NC 82.3 177.7 90.5 REMARK 620 5 HEM A 402 ND 91.4 89.1 177.7 90.5 REMARK 620 6 3SQ A 401 N1 173.6 90.3 90.6 92.0 91.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 317 SG REMARK 620 2 HEM B 401 NA 97.2 REMARK 620 3 HEM B 401 NB 88.7 87.1 REMARK 620 4 HEM B 401 NC 84.1 178.1 91.5 REMARK 620 5 HEM B 401 ND 93.1 91.8 178.0 89.6 REMARK 620 6 3SQ B 402 N1 176.4 86.0 89.8 92.7 88.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3SQ A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3SQ B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4TT5 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH 4-(4-BROMOPHENYL)-1H-IMIDAZOLE REMARK 900 RELATED ID: 4TUV RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH 4-(4-CHLOROPHENYL)-1H-IMIDAZOLE DBREF 4WPD A 1 368 UNP Q55080 CP119_SULAC 1 368 DBREF 4WPD B 1 368 UNP Q55080 CP119_SULAC 1 368 SEQRES 1 A 368 MET TYR ASP TRP PHE SER GLU MET ARG LYS LYS ASP PRO SEQRES 2 A 368 VAL TYR TYR ASP GLY ASN ILE TRP GLN VAL PHE SER TYR SEQRES 3 A 368 ARG TYR THR LYS GLU VAL LEU ASN ASN PHE SER LYS PHE SEQRES 4 A 368 SER SER ASP LEU THR GLY TYR HIS GLU ARG LEU GLU ASP SEQRES 5 A 368 LEU ARG ASN GLY LYS ILE ARG PHE ASP ILE PRO THR ARG SEQRES 6 A 368 TYR THR MET LEU THR SER ASP PRO PRO LEU HIS ASP GLU SEQRES 7 A 368 LEU ARG SER MET SER ALA ASP ILE PHE SER PRO GLN LYS SEQRES 8 A 368 LEU GLN THR LEU GLU THR PHE ILE ARG GLU THR THR ARG SEQRES 9 A 368 SER LEU LEU ASP SER ILE ASP PRO ARG GLU ASP ASP ILE SEQRES 10 A 368 VAL LYS LYS LEU ALA VAL PRO LEU PRO ILE ILE VAL ILE SEQRES 11 A 368 SER LYS ILE LEU GLY LEU PRO ILE GLU ASP LYS GLU LYS SEQRES 12 A 368 PHE LYS GLU TRP SER ASP LEU VAL ALA PHE ARG LEU GLY SEQRES 13 A 368 LYS PRO GLY GLU ILE PHE GLU LEU GLY LYS LYS TYR LEU SEQRES 14 A 368 GLU LEU ILE GLY TYR VAL LYS ASP HIS LEU ASN SER GLY SEQRES 15 A 368 THR GLU VAL VAL SER ARG VAL VAL ASN SER ASN LEU SER SEQRES 16 A 368 ASP ILE GLU LYS LEU GLY TYR ILE ILE LEU LEU LEU ILE SEQRES 17 A 368 ALA GLY ASN GLU THR THR THR ASN LEU ILE SER ASN SER SEQRES 18 A 368 VAL ILE ASP PHE THR ARG PHE ASN LEU TRP GLN ARG ILE SEQRES 19 A 368 ARG GLU GLU ASN LEU TYR LEU LYS ALA ILE GLU GLU ALA SEQRES 20 A 368 LEU ARG TYR SER PRO PRO VAL MET ARG THR VAL ARG LYS SEQRES 21 A 368 THR LYS GLU ARG VAL LYS LEU GLY ASP GLN THR ILE GLU SEQRES 22 A 368 GLU GLY GLU TYR VAL ARG VAL TRP ILE ALA SER ALA ASN SEQRES 23 A 368 ARG ASP GLU GLU VAL PHE HIS ASP GLY GLU LYS PHE ILE SEQRES 24 A 368 PRO ASP ARG ASN PRO ASN PRO HIS LEU SER PHE GLY SER SEQRES 25 A 368 GLY ILE HIS LEU CYS LEU GLY ALA PRO LEU ALA ARG LEU SEQRES 26 A 368 GLU ALA ARG ILE ALA ILE GLU GLU PHE SER LYS ARG PHE SEQRES 27 A 368 ARG HIS ILE GLU ILE LEU ASP THR GLU LYS VAL PRO ASN SEQRES 28 A 368 GLU VAL LEU ASN GLY TYR LYS ARG LEU VAL VAL ARG LEU SEQRES 29 A 368 LYS SER ASN GLU SEQRES 1 B 368 MET TYR ASP TRP PHE SER GLU MET ARG LYS LYS ASP PRO SEQRES 2 B 368 VAL TYR TYR ASP GLY ASN ILE TRP GLN VAL PHE SER TYR SEQRES 3 B 368 ARG TYR THR LYS GLU VAL LEU ASN ASN PHE SER LYS PHE SEQRES 4 B 368 SER SER ASP LEU THR GLY TYR HIS GLU ARG LEU GLU ASP SEQRES 5 B 368 LEU ARG ASN GLY LYS ILE ARG PHE ASP ILE PRO THR ARG SEQRES 6 B 368 TYR THR MET LEU THR SER ASP PRO PRO LEU HIS ASP GLU SEQRES 7 B 368 LEU ARG SER MET SER ALA ASP ILE PHE SER PRO GLN LYS SEQRES 8 B 368 LEU GLN THR LEU GLU THR PHE ILE ARG GLU THR THR ARG SEQRES 9 B 368 SER LEU LEU ASP SER ILE ASP PRO ARG GLU ASP ASP ILE SEQRES 10 B 368 VAL LYS LYS LEU ALA VAL PRO LEU PRO ILE ILE VAL ILE SEQRES 11 B 368 SER LYS ILE LEU GLY LEU PRO ILE GLU ASP LYS GLU LYS SEQRES 12 B 368 PHE LYS GLU TRP SER ASP LEU VAL ALA PHE ARG LEU GLY SEQRES 13 B 368 LYS PRO GLY GLU ILE PHE GLU LEU GLY LYS LYS TYR LEU SEQRES 14 B 368 GLU LEU ILE GLY TYR VAL LYS ASP HIS LEU ASN SER GLY SEQRES 15 B 368 THR GLU VAL VAL SER ARG VAL VAL ASN SER ASN LEU SER SEQRES 16 B 368 ASP ILE GLU LYS LEU GLY TYR ILE ILE LEU LEU LEU ILE SEQRES 17 B 368 ALA GLY ASN GLU THR THR THR ASN LEU ILE SER ASN SER SEQRES 18 B 368 VAL ILE ASP PHE THR ARG PHE ASN LEU TRP GLN ARG ILE SEQRES 19 B 368 ARG GLU GLU ASN LEU TYR LEU LYS ALA ILE GLU GLU ALA SEQRES 20 B 368 LEU ARG TYR SER PRO PRO VAL MET ARG THR VAL ARG LYS SEQRES 21 B 368 THR LYS GLU ARG VAL LYS LEU GLY ASP GLN THR ILE GLU SEQRES 22 B 368 GLU GLY GLU TYR VAL ARG VAL TRP ILE ALA SER ALA ASN SEQRES 23 B 368 ARG ASP GLU GLU VAL PHE HIS ASP GLY GLU LYS PHE ILE SEQRES 24 B 368 PRO ASP ARG ASN PRO ASN PRO HIS LEU SER PHE GLY SER SEQRES 25 B 368 GLY ILE HIS LEU CYS LEU GLY ALA PRO LEU ALA ARG LEU SEQRES 26 B 368 GLU ALA ARG ILE ALA ILE GLU GLU PHE SER LYS ARG PHE SEQRES 27 B 368 ARG HIS ILE GLU ILE LEU ASP THR GLU LYS VAL PRO ASN SEQRES 28 B 368 GLU VAL LEU ASN GLY TYR LYS ARG LEU VAL VAL ARG LEU SEQRES 29 B 368 LYS SER ASN GLU HET 3SQ A 401 12 HET HEM A 402 43 HET HEM B 401 43 HET 3SQ B 402 12 HETNAM 3SQ 4-(4-FLUOROPHENYL)-1H-IMIDAZOLE HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 3 3SQ 2(C9 H7 F N2) FORMUL 4 HEM 2(C34 H32 FE N4 O4) FORMUL 7 HOH *783(H2 O) HELIX 1 AA1 PHE A 5 ASP A 12 1 8 HELIX 2 AA2 SER A 25 ASN A 35 1 11 HELIX 3 AA3 GLY A 45 ASN A 55 1 11 HELIX 4 AA4 ILE A 62 TYR A 66 5 5 HELIX 5 AA5 THR A 67 SER A 71 5 5 HELIX 6 AA6 PRO A 74 MET A 82 1 9 HELIX 7 AA7 SER A 88 ASP A 108 1 21 HELIX 8 AA8 ILE A 117 LEU A 121 1 5 HELIX 9 AA9 VAL A 123 GLY A 135 1 13 HELIX 10 AB1 ASP A 140 GLY A 156 1 17 HELIX 11 AB2 GLY A 165 LEU A 179 1 15 HELIX 12 AB3 ASN A 180 GLY A 182 5 3 HELIX 13 AB4 THR A 183 SER A 192 1 10 HELIX 14 AB5 SER A 195 ILE A 208 1 14 HELIX 15 AB6 GLY A 210 PHE A 228 1 19 HELIX 16 AB7 LEU A 230 GLU A 237 1 8 HELIX 17 AB8 LEU A 239 SER A 251 1 13 HELIX 18 AB9 TRP A 281 ASN A 286 1 6 HELIX 19 AC1 GLY A 319 PHE A 338 1 20 HELIX 20 AC2 PHE B 5 ASP B 12 1 8 HELIX 21 AC3 SER B 25 ASN B 35 1 11 HELIX 22 AC4 GLY B 45 ASN B 55 1 11 HELIX 23 AC5 ILE B 62 TYR B 66 5 5 HELIX 24 AC6 THR B 67 SER B 71 5 5 HELIX 25 AC7 PRO B 74 MET B 82 1 9 HELIX 26 AC8 SER B 88 SER B 109 1 22 HELIX 27 AC9 ILE B 117 LEU B 121 1 5 HELIX 28 AD1 VAL B 123 GLY B 135 1 13 HELIX 29 AD2 ASP B 140 GLY B 156 1 17 HELIX 30 AD3 GLY B 165 LEU B 179 1 15 HELIX 31 AD4 THR B 183 ASN B 191 1 9 HELIX 32 AD5 SER B 195 ALA B 209 1 15 HELIX 33 AD6 GLY B 210 PHE B 228 1 19 HELIX 34 AD7 LEU B 230 GLU B 237 1 8 HELIX 35 AD8 LEU B 239 SER B 251 1 13 HELIX 36 AD9 TRP B 281 ASN B 286 1 6 HELIX 37 AE1 GLY B 319 ARG B 337 1 19 SHEET 1 AA1 5 VAL A 14 TYR A 16 0 SHEET 2 AA1 5 TRP A 21 VAL A 23 -1 O GLN A 22 N TYR A 15 SHEET 3 AA1 5 TYR A 277 VAL A 280 1 O ARG A 279 N TRP A 21 SHEET 4 AA1 5 THR A 257 THR A 261 -1 N THR A 257 O VAL A 280 SHEET 5 AA1 5 PHE A 39 SER A 40 -1 N SER A 40 O LYS A 260 SHEET 1 AA2 3 ASP A 115 ASP A 116 0 SHEET 2 AA2 3 TYR A 357 LYS A 365 -1 O VAL A 362 N ASP A 115 SHEET 3 AA2 3 ARG A 339 LYS A 348 -1 N LEU A 344 O VAL A 361 SHEET 1 AA3 2 VAL A 265 LEU A 267 0 SHEET 2 AA3 2 GLN A 270 ILE A 272 -1 O ILE A 272 N VAL A 265 SHEET 1 AA4 5 VAL B 14 TYR B 16 0 SHEET 2 AA4 5 TRP B 21 VAL B 23 -1 O GLN B 22 N TYR B 15 SHEET 3 AA4 5 TYR B 277 VAL B 280 1 O ARG B 279 N TRP B 21 SHEET 4 AA4 5 THR B 257 THR B 261 -1 N THR B 257 O VAL B 280 SHEET 5 AA4 5 PHE B 39 SER B 40 -1 N SER B 40 O LYS B 260 SHEET 1 AA5 3 ASP B 115 ASP B 116 0 SHEET 2 AA5 3 TYR B 357 SER B 366 -1 O VAL B 362 N ASP B 115 SHEET 3 AA5 3 PHE B 338 LYS B 348 -1 N LEU B 344 O VAL B 361 SHEET 1 AA6 2 VAL B 265 LEU B 267 0 SHEET 2 AA6 2 GLN B 270 ILE B 272 -1 O ILE B 272 N VAL B 265 LINK SG CYS A 317 FE HEM A 402 1555 1555 2.30 LINK N1 3SQ A 401 FE HEM A 402 1555 1555 1.95 LINK SG CYS B 317 FE HEM B 401 1555 1555 2.29 LINK FE HEM B 401 N1 3SQ B 402 1555 1555 1.98 CISPEP 1 PRO A 73 PRO A 74 0 0.20 CISPEP 2 ASN A 303 PRO A 304 0 1.83 CISPEP 3 PRO B 73 PRO B 74 0 1.93 CISPEP 4 ASN B 303 PRO B 304 0 0.74 SITE 1 AC1 7 ALA A 152 LEU A 155 GLY A 156 ALA A 209 SITE 2 AC1 7 VAL A 353 LEU A 354 HEM A 402 SITE 1 AC2 25 MET A 68 LEU A 69 HIS A 76 ARG A 80 SITE 2 AC2 25 PHE A 87 LEU A 205 LEU A 206 GLY A 210 SITE 3 AC2 25 THR A 213 THR A 214 LEU A 217 THR A 257 SITE 4 AC2 25 ARG A 259 SER A 309 PHE A 310 GLY A 311 SITE 5 AC2 25 ILE A 314 HIS A 315 CYS A 317 GLY A 319 SITE 6 AC2 25 ALA A 323 3SQ A 401 HOH A 595 HOH A 598 SITE 7 AC2 25 HOH A 706 SITE 1 AC3 25 MET B 68 LEU B 69 HIS B 76 ARG B 80 SITE 2 AC3 25 PHE B 87 LEU B 205 LEU B 206 GLY B 210 SITE 3 AC3 25 THR B 213 THR B 214 LEU B 217 THR B 257 SITE 4 AC3 25 ARG B 259 SER B 309 PHE B 310 GLY B 311 SITE 5 AC3 25 ILE B 314 HIS B 315 CYS B 317 GLY B 319 SITE 6 AC3 25 ALA B 323 3SQ B 402 HOH B 604 HOH B 614 SITE 7 AC3 25 HOH B 724 SITE 1 AC4 7 ALA B 152 LEU B 155 GLY B 156 ALA B 209 SITE 2 AC4 7 VAL B 353 LEU B 354 HEM B 401 CRYST1 78.801 95.458 106.715 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012690 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010476 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009371 0.00000