HEADER OXIDOREDUCTASE 22-OCT-14 4WQM TITLE STRUCTURE OF THE TOLUENE 4-MONOOXYGENASE NADH OXIDOREDUCTASE T4MOF, TITLE 2 K270S K271S VARIANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLUENE-4-MONOOXYGENASE ELECTRON TRANSFER COMPONENT; COMPND 3 CHAIN: A; COMPND 4 EC: 1.18.1.3; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS MENDOCINA; SOURCE 3 ORGANISM_TAXID: 300; SOURCE 4 GENE: TMOF; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: RILP KEYWDS OXIDOREDUCTASE, IRON-SULFUR, FERREDOXIN-NAD REDUCTASE, ELECTRON- KEYWDS 2 TRANSFER EXPDTA X-RAY DIFFRACTION AUTHOR J.F.ACHESON,B.G.FOX REVDAT 6 27-DEC-23 4WQM 1 LINK REVDAT 5 27-NOV-19 4WQM 1 REMARK REVDAT 4 27-SEP-17 4WQM 1 REMARK REVDAT 3 13-SEP-17 4WQM 1 JRNL REMARK REVDAT 2 07-OCT-15 4WQM 1 JRNL REVDAT 1 09-SEP-15 4WQM 0 JRNL AUTH J.F.ACHESON,H.MOSESON,B.G.FOX JRNL TITL STRUCTURE OF T4MOF, THE TOLUENE 4-MONOOXYGENASE FERREDOXIN JRNL TITL 2 OXIDOREDUCTASE. JRNL REF BIOCHEMISTRY V. 54 5980 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 26309236 JRNL DOI 10.1021/ACS.BIOCHEM.5B00692 REMARK 2 REMARK 2 RESOLUTION. 1.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9-1675 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 43388 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.610 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.1292 - 3.8898 0.98 3072 149 0.1427 0.1742 REMARK 3 2 3.8898 - 3.0888 0.99 3055 148 0.1519 0.1531 REMARK 3 3 3.0888 - 2.6988 0.98 3011 144 0.1596 0.2086 REMARK 3 4 2.6988 - 2.4522 0.98 3016 147 0.1551 0.2140 REMARK 3 5 2.4522 - 2.2765 0.98 2966 143 0.1449 0.1646 REMARK 3 6 2.2765 - 2.1424 0.97 2997 145 0.1328 0.2001 REMARK 3 7 2.1424 - 2.0351 0.97 2943 141 0.1334 0.2157 REMARK 3 8 2.0351 - 1.9466 0.97 2946 143 0.1394 0.2107 REMARK 3 9 1.9466 - 1.8716 0.96 2950 143 0.1428 0.2073 REMARK 3 10 1.8716 - 1.8071 0.96 2944 141 0.1317 0.2045 REMARK 3 11 1.8071 - 1.7506 0.96 2922 142 0.1276 0.1754 REMARK 3 12 1.7506 - 1.7005 0.96 2912 141 0.1269 0.1963 REMARK 3 13 1.7005 - 1.6558 0.95 2897 140 0.1409 0.2153 REMARK 3 14 1.6558 - 1.6154 0.90 2757 133 0.1648 0.2363 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2733 REMARK 3 ANGLE : 1.154 3703 REMARK 3 CHIRALITY : 0.041 408 REMARK 3 PLANARITY : 0.004 469 REMARK 3 DIHEDRAL : 14.793 1020 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WQM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000204336. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43392 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.620 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.62 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.31700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG 3350, 100 MM BIS-TRIS, 200 MM REMARK 280 AMMONIUM ACETATE, 50 MM GUANIDINE-HCL, 5 MM NICL2, PH 5.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 42.16700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.53700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 42.16700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.53700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 642 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 268 OG REMARK 470 GLU A 269 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLN A 224 O HOH A 897 1.91 REMARK 500 O HOH A 610 O HOH A 615 1.93 REMARK 500 O HOH A 889 O HOH A 891 1.93 REMARK 500 O HOH A 882 O HOH A 899 1.96 REMARK 500 O HOH A 542 O HOH A 640 1.97 REMARK 500 O4 BTB A 408 O HOH A 501 2.00 REMARK 500 O HOH A 839 O HOH A 845 2.02 REMARK 500 N SER A 1 O HOH A 502 2.07 REMARK 500 O HOH A 601 O HOH A 603 2.08 REMARK 500 OE2 GLU A 246 O HOH A 503 2.09 REMARK 500 O HOH A 813 O HOH A 819 2.09 REMARK 500 O HOH A 885 O HOH A 887 2.14 REMARK 500 O HOH A 863 O HOH A 870 2.15 REMARK 500 OE2 GLU A 123 O HOH A 835 2.16 REMARK 500 O HOH A 597 O HOH A 646 2.17 REMARK 500 OE1 GLU A 243 O HOH A 884 2.18 REMARK 500 O HOH A 831 O HOH A 880 2.19 REMARK 500 O HOH A 750 O HOH A 895 2.19 REMARK 500 O HOH A 566 O HOH A 582 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 522 O HOH A 522 2356 1.85 REMARK 500 O HOH A 532 O HOH A 533 3555 2.06 REMARK 500 O HOH A 645 O HOH A 657 4346 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 35 -57.49 -136.53 REMARK 500 ASN A 37 27.87 49.68 REMARK 500 TRP A 57 81.13 -154.50 REMARK 500 GLU A 93 63.90 -116.62 REMARK 500 GLU A 142 -2.60 69.69 REMARK 500 ASP A 155 98.09 -162.29 REMARK 500 ALA A 197 -111.11 -146.96 REMARK 500 SER A 268 -8.40 60.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 777 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH A 915 DISTANCE = 6.75 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 404 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 11 NE2 REMARK 620 2 HOH A 644 O 113.3 REMARK 620 3 HOH A 657 O 153.6 72.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 403 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 12 NE2 REMARK 620 2 BTB A 407 O6 99.2 REMARK 620 3 BTB A 407 O8 95.6 114.1 REMARK 620 4 BTB A 407 O1 101.6 83.9 152.8 REMARK 620 5 BTB A 407 O4 92.8 155.5 85.6 72.8 REMARK 620 6 BTB A 407 N 168.5 91.8 83.0 75.9 75.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 401 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 36 SG REMARK 620 2 FES A 401 S1 107.1 REMARK 620 3 FES A 401 S2 117.7 102.7 REMARK 620 4 CYS A 41 SG 105.9 116.6 107.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 401 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 44 SG REMARK 620 2 FES A 401 S1 115.5 REMARK 620 3 FES A 401 S2 111.4 104.4 REMARK 620 4 CYS A 76 SG 102.8 104.6 118.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 409 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 98 NE2 REMARK 620 2 BTB A 406 O1 92.6 REMARK 620 3 BTB A 406 O4 95.9 84.8 REMARK 620 4 BTB A 406 N 174.3 82.3 86.0 REMARK 620 5 BTB A 406 O6 98.0 89.9 165.3 79.7 REMARK 620 6 BTB A 406 O8 99.5 167.9 94.5 85.7 87.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 405 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 278 NE2 REMARK 620 2 BTB A 408 O1 112.9 REMARK 620 3 BTB A 408 O3 84.0 51.9 REMARK 620 4 BTB A 408 N 167.2 79.4 101.9 REMARK 620 5 BTB A 408 O6 90.1 149.3 114.8 77.1 REMARK 620 6 BTB A 408 O8 101.7 91.5 140.9 81.1 103.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FES A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BTB A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BTB A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BTB A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 409 DBREF 4WQM A 2 326 UNP Q03304 TMOF_PSEME 2 326 SEQADV 4WQM SER A 1 UNP Q03304 EXPRESSION TAG SEQADV 4WQM SER A 270 UNP Q03304 LYS 270 ENGINEERED MUTATION SEQADV 4WQM SER A 271 UNP Q03304 LYS 271 ENGINEERED MUTATION SEQRES 1 A 326 SER PHE ASN ILE GLN SER ASP ASP LEU LEU HIS HIS PHE SEQRES 2 A 326 GLU ALA ASP SER ASN ASP THR LEU LEU SER ALA ALA LEU SEQRES 3 A 326 ARG ALA GLU LEU VAL PHE PRO TYR GLU CYS ASN SER GLY SEQRES 4 A 326 GLY CYS GLY ALA CYS LYS ILE GLU LEU LEU GLU GLY GLU SEQRES 5 A 326 VAL SER ASN LEU TRP PRO ASP ALA PRO GLY LEU ALA ALA SEQRES 6 A 326 ARG GLU LEU ARG LYS ASN ARG PHE LEU ALA CYS GLN CYS SEQRES 7 A 326 LYS PRO LEU SER ASP LEU LYS ILE LYS VAL ILE ASN ARG SEQRES 8 A 326 ALA GLU GLY ARG ALA SER HIS PRO PRO LYS ARG PHE SER SEQRES 9 A 326 THR ARG VAL VAL SER LYS ARG PHE LEU SER ASP GLU MET SEQRES 10 A 326 PHE GLU LEU ARG LEU GLU ALA GLU GLN LYS VAL VAL PHE SEQRES 11 A 326 SER PRO GLY GLN TYR PHE MET VAL ASP VAL PRO GLU LEU SEQRES 12 A 326 GLY THR ARG ALA TYR SER ALA ALA ASN PRO VAL ASP GLY SEQRES 13 A 326 ASN THR LEU THR LEU ILE VAL LYS ALA VAL PRO ASN GLY SEQRES 14 A 326 LYS VAL SER CYS ALA LEU ALA ASN GLU THR ILE GLU THR SEQRES 15 A 326 LEU GLN LEU ASP GLY PRO TYR GLY LEU SER VAL LEU LYS SEQRES 16 A 326 THR ALA ASP GLU THR GLN SER VAL PHE ILE ALA GLY GLY SEQRES 17 A 326 SER GLY ILE ALA PRO MET VAL SER MET VAL ASN THR LEU SEQRES 18 A 326 ILE ALA GLN GLY TYR GLU LYS PRO ILE THR VAL PHE TYR SEQRES 19 A 326 GLY SER ARG LEU GLU ALA GLU LEU GLU ALA ALA GLU THR SEQRES 20 A 326 LEU PHE GLY TRP LYS GLU ASN LEU LYS LEU ILE ASN VAL SEQRES 21 A 326 SER SER SER VAL VAL GLY ASN SER GLU SER SER TYR PRO SEQRES 22 A 326 THR GLY TYR VAL HIS GLU ILE ILE PRO GLU TYR MET GLU SEQRES 23 A 326 GLY LEU LEU GLY ALA GLU PHE TYR LEU CYS GLY PRO PRO SEQRES 24 A 326 GLN MET ILE ASN SER VAL GLN LYS LEU LEU MET ILE GLU SEQRES 25 A 326 ASN LYS VAL PRO PHE GLU ALA ILE HIS PHE ASP ARG PHE SEQRES 26 A 326 PHE HET FES A 401 4 HET FAD A 402 53 HET NI A 403 1 HET NI A 404 1 HET NI A 405 1 HET BTB A 406 14 HET BTB A 407 14 HET BTB A 408 14 HET NI A 409 1 HETNAM FES FE2/S2 (INORGANIC) CLUSTER HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM NI NICKEL (II) ION HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETSYN BTB BIS-TRIS BUFFER FORMUL 2 FES FE2 S2 FORMUL 3 FAD C27 H33 N9 O15 P2 FORMUL 4 NI 4(NI 2+) FORMUL 7 BTB 3(C8 H19 N O5) FORMUL 11 HOH *420(H2 O) HELIX 1 AA1 THR A 20 ALA A 28 1 9 HELIX 2 AA2 ALA A 64 LYS A 70 1 7 HELIX 3 AA3 GLY A 169 GLU A 178 1 10 HELIX 4 AA4 GLY A 210 GLN A 224 1 15 HELIX 5 AA5 LEU A 238 PHE A 249 1 12 HELIX 6 AA6 TYR A 276 ILE A 281 1 6 HELIX 7 AA7 PRO A 282 LEU A 289 5 8 HELIX 8 AA8 PRO A 298 ILE A 311 1 14 HELIX 9 AA9 PRO A 316 GLU A 318 5 3 SHEET 1 AA1 5 PHE A 13 ALA A 15 0 SHEET 2 AA1 5 PHE A 2 GLN A 5 -1 N ILE A 4 O PHE A 13 SHEET 3 AA1 5 LEU A 84 VAL A 88 1 O ILE A 86 N GLN A 5 SHEET 4 AA1 5 LYS A 45 GLU A 50 -1 N GLU A 47 O LYS A 87 SHEET 5 AA1 5 ARG A 72 LEU A 74 -1 O PHE A 73 N ILE A 46 SHEET 1 AA2 2 VAL A 53 ASN A 55 0 SHEET 2 AA2 2 CYS A 78 PRO A 80 -1 O LYS A 79 N SER A 54 SHEET 1 AA3 6 GLY A 144 SER A 149 0 SHEET 2 AA3 6 TYR A 135 VAL A 140 -1 N VAL A 138 O ARG A 146 SHEET 3 AA3 6 THR A 182 TYR A 189 -1 O ASP A 186 N MET A 137 SHEET 4 AA3 6 LYS A 101 PHE A 112 -1 N PHE A 103 O LEU A 185 SHEET 5 AA3 6 MET A 117 GLU A 123 -1 O GLU A 119 N ARG A 111 SHEET 6 AA3 6 THR A 158 LYS A 164 -1 O LEU A 159 N LEU A 122 SHEET 1 AA4 5 LEU A 255 SER A 261 0 SHEET 2 AA4 5 ILE A 230 SER A 236 1 N VAL A 232 O ILE A 258 SHEET 3 AA4 5 SER A 202 GLY A 207 1 N PHE A 204 O PHE A 233 SHEET 4 AA4 5 GLU A 292 GLY A 297 1 O TYR A 294 N ILE A 205 SHEET 5 AA4 5 ILE A 320 ARG A 324 1 O HIS A 321 N LEU A 295 LINK NE2 HIS A 11 NI NI A 404 1555 1555 2.39 LINK NE2 HIS A 12 NI NI A 403 1555 1555 2.01 LINK SG CYS A 36 FE1 FES A 401 1555 1555 2.33 LINK SG CYS A 41 FE1 FES A 401 1555 1555 2.31 LINK SG CYS A 44 FE2 FES A 401 1555 1555 2.31 LINK SG CYS A 76 FE2 FES A 401 1555 1555 2.32 LINK NE2 HIS A 98 NI NI A 409 1555 1555 2.06 LINK NE2 HIS A 278 NI NI A 405 1555 1555 2.01 LINK NI NI A 403 O6 BTB A 407 1555 3555 1.91 LINK NI NI A 403 O8 BTB A 407 1555 3555 1.82 LINK NI NI A 403 O1 BTB A 407 1555 3555 2.47 LINK NI NI A 403 O4 BTB A 407 1555 3555 2.44 LINK NI NI A 403 N BTB A 407 1555 3555 2.05 LINK NI NI A 404 O HOH A 644 1555 1555 2.58 LINK NI NI A 404 O HOH A 657 1555 1555 2.30 LINK NI NI A 405 O1 BTB A 408 1555 2355 2.74 LINK NI NI A 405 O3 BTB A 408 1555 2355 2.29 LINK NI NI A 405 N BTB A 408 1555 2355 2.01 LINK NI NI A 405 O6 BTB A 408 1555 2355 2.57 LINK NI NI A 405 O8 BTB A 408 1555 2355 1.75 LINK O1 BTB A 406 NI NI A 409 1555 1555 2.03 LINK O4 BTB A 406 NI NI A 409 1555 1555 2.06 LINK N BTB A 406 NI NI A 409 1555 1555 1.97 LINK O6 BTB A 406 NI NI A 409 1555 1555 2.00 LINK O8 BTB A 406 NI NI A 409 1555 1555 2.02 CISPEP 1 GLY A 187 PRO A 188 0 4.47 SITE 1 AC1 10 TYR A 34 GLU A 35 CYS A 36 ASN A 37 SITE 2 AC1 10 GLY A 39 GLY A 40 CYS A 41 GLY A 42 SITE 3 AC1 10 CYS A 44 CYS A 76 SITE 1 AC2 28 CYS A 36 SER A 38 TRP A 57 TYR A 135 SITE 2 AC2 28 ARG A 146 ALA A 147 TYR A 148 SER A 149 SITE 3 AC2 28 ILE A 162 VAL A 163 LYS A 164 GLY A 169 SITE 4 AC2 28 LYS A 170 VAL A 171 SER A 172 SER A 209 SITE 5 AC2 28 ALA A 212 PHE A 325 HOH A 667 HOH A 668 SITE 6 AC2 28 HOH A 697 HOH A 710 HOH A 747 HOH A 763 SITE 7 AC2 28 HOH A 787 HOH A 907 HOH A 912 HOH A 914 SITE 1 AC3 2 HIS A 12 BTB A 407 SITE 1 AC4 4 HIS A 11 GLU A 29 HOH A 644 HOH A 657 SITE 1 AC5 2 HIS A 278 BTB A 408 SITE 1 AC6 10 SER A 97 HIS A 98 PHE A 130 SER A 131 SITE 2 AC6 10 VAL A 140 PRO A 141 GLU A 142 GLU A 178 SITE 3 AC6 10 NI A 409 HOH A 511 SITE 1 AC7 8 HIS A 12 ASP A 115 NI A 403 HOH A 507 SITE 2 AC7 8 HOH A 509 HOH A 528 HOH A 564 HOH A 590 SITE 1 AC8 10 PRO A 61 GLY A 62 LEU A 63 ALA A 64 SITE 2 AC8 10 HIS A 278 GLU A 279 NI A 405 HOH A 501 SITE 3 AC8 10 HOH A 517 HOH A 539 SITE 1 AC9 3 HIS A 98 GLU A 178 BTB A 406 CRYST1 84.334 69.074 68.224 90.00 116.53 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011858 0.000000 0.005921 0.00000 SCALE2 0.000000 0.014477 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016383 0.00000