HEADER HYDROLASE 24-OCT-14 4WRK TITLE THE 3D STRUCTURE OF D95N MUTANT DUTPASE FROM PHAGE PHI11 OF S. AUREUS TITLE 2 REVEALS THE MOLECULAR DETAILS FOR THE COORDINATION OF A STRUCTURAL TITLE 3 MG(II) ION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DUTPASE; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 OTHER_DETAILS: D95N MUTANT DUTPASE FROM PHAGE PHI11 OF S.AUREUS SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS PHAGE PHI11; SOURCE 3 ORGANISM_TAXID: 12360; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS MAGNESIUM COORDINATION MUTANT, HYDROLASE, JELLY-ROLL EXPDTA X-RAY DIFFRACTION AUTHOR A.A.BENDES,I.LEVELES,B.G.VERTESSY REVDAT 2 10-JAN-24 4WRK 1 LINK SITE ATOM REVDAT 1 23-DEC-15 4WRK 0 JRNL AUTH A.A.BENDES,I.LEVELES,B.G.VERTESSY JRNL TITL THE 3D STRUCTURE OF D95N MUTANT DUTPASE FROM PHAGE PHI11 OF JRNL TITL 2 S. AUREUS REVEALS THE MOLECULAR DETAILS FOR THE COORDINATION JRNL TITL 3 OF A STRUCTURAL MG(II) ION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 22581 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1136 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.5730 - 5.7567 0.98 2800 151 0.1885 0.2085 REMARK 3 2 5.7567 - 4.5886 0.99 2715 141 0.1768 0.2644 REMARK 3 3 4.5886 - 4.0143 1.00 2672 140 0.1730 0.2068 REMARK 3 4 4.0143 - 3.6499 1.00 2663 149 0.2039 0.2651 REMARK 3 5 3.6499 - 3.3897 1.00 2661 134 0.2276 0.2732 REMARK 3 6 3.3897 - 3.1907 1.00 2638 133 0.2449 0.2790 REMARK 3 7 3.1907 - 3.0316 1.00 2663 127 0.2820 0.3570 REMARK 3 8 3.0316 - 2.9000 1.00 2633 161 0.2980 0.3598 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.610 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 7167 REMARK 3 ANGLE : 0.932 9802 REMARK 3 CHIRALITY : 0.038 1159 REMARK 3 PLANARITY : 0.005 1250 REMARK 3 DIHEDRAL : 11.718 2493 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.6115 -28.5201 -32.1269 REMARK 3 T TENSOR REMARK 3 T11: 0.1765 T22: 0.1929 REMARK 3 T33: 0.2321 T12: -0.0061 REMARK 3 T13: 0.0191 T23: 0.0479 REMARK 3 L TENSOR REMARK 3 L11: 0.5661 L22: 0.8521 REMARK 3 L33: 1.0757 L12: -0.5667 REMARK 3 L13: 0.0118 L23: 0.5395 REMARK 3 S TENSOR REMARK 3 S11: -0.0878 S12: 0.1804 S13: 0.3129 REMARK 3 S21: -0.0307 S22: 0.1065 S23: -0.0697 REMARK 3 S31: 0.1685 S32: -0.0490 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 95 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.7472 -21.6103 -20.1355 REMARK 3 T TENSOR REMARK 3 T11: 0.1808 T22: 0.3464 REMARK 3 T33: 0.4709 T12: 0.0613 REMARK 3 T13: 0.0254 T23: 0.0178 REMARK 3 L TENSOR REMARK 3 L11: 0.0018 L22: 0.0242 REMARK 3 L33: -0.0312 L12: -0.2644 REMARK 3 L13: -0.2911 L23: 0.0215 REMARK 3 S TENSOR REMARK 3 S11: 0.8503 S12: -0.6421 S13: 0.4977 REMARK 3 S21: 0.0487 S22: -0.5655 S23: 0.1695 REMARK 3 S31: -0.2879 S32: 0.2360 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 130 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0280 -36.8085 -26.4966 REMARK 3 T TENSOR REMARK 3 T11: 0.2033 T22: 0.2744 REMARK 3 T33: 0.1902 T12: 0.0669 REMARK 3 T13: -0.0391 T23: 0.0666 REMARK 3 L TENSOR REMARK 3 L11: 0.2158 L22: 0.3185 REMARK 3 L33: 0.0928 L12: 0.6476 REMARK 3 L13: 0.0528 L23: -0.4701 REMARK 3 S TENSOR REMARK 3 S11: -0.1424 S12: 0.1984 S13: -0.2168 REMARK 3 S21: -0.1292 S22: 0.2244 S23: -0.1342 REMARK 3 S31: -0.0850 S32: 0.0274 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7292 -19.1794 -14.2698 REMARK 3 T TENSOR REMARK 3 T11: 0.2357 T22: 0.1840 REMARK 3 T33: 0.2301 T12: 0.0154 REMARK 3 T13: 0.0118 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 0.6402 L22: 0.8159 REMARK 3 L33: 1.3022 L12: 0.2403 REMARK 3 L13: -0.4068 L23: 0.4035 REMARK 3 S TENSOR REMARK 3 S11: 0.0208 S12: -0.0699 S13: 0.1652 REMARK 3 S21: 0.0822 S22: 0.0336 S23: 0.1008 REMARK 3 S31: 0.0424 S32: 0.2499 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 95 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3260 -23.1096 3.9527 REMARK 3 T TENSOR REMARK 3 T11: 0.2257 T22: 0.2855 REMARK 3 T33: 0.2837 T12: 0.0345 REMARK 3 T13: 0.0735 T23: -0.0760 REMARK 3 L TENSOR REMARK 3 L11: 0.2358 L22: 0.3050 REMARK 3 L33: 0.5655 L12: -0.7180 REMARK 3 L13: 0.1050 L23: 0.4203 REMARK 3 S TENSOR REMARK 3 S11: -0.0766 S12: -0.2409 S13: -0.3467 REMARK 3 S21: -0.1434 S22: -0.1508 S23: -0.1664 REMARK 3 S31: -0.0995 S32: 0.3059 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 130 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4320 -27.3124 -30.8466 REMARK 3 T TENSOR REMARK 3 T11: 0.2505 T22: 0.3056 REMARK 3 T33: 0.2198 T12: -0.0664 REMARK 3 T13: 0.0441 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: -0.0066 L22: 0.4713 REMARK 3 L33: 0.0719 L12: -0.5604 REMARK 3 L13: 0.5784 L23: -0.0799 REMARK 3 S TENSOR REMARK 3 S11: 0.0308 S12: 0.2152 S13: 0.0108 REMARK 3 S21: 0.0593 S22: 0.1170 S23: 0.0942 REMARK 3 S31: 0.2226 S32: 0.2202 S33: 0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 3 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.7586 -43.2889 -16.9908 REMARK 3 T TENSOR REMARK 3 T11: 0.2132 T22: 0.2401 REMARK 3 T33: 0.2202 T12: 0.0141 REMARK 3 T13: 0.0001 T23: -0.0000 REMARK 3 L TENSOR REMARK 3 L11: 1.4125 L22: -0.1441 REMARK 3 L33: -0.1851 L12: 0.0113 REMARK 3 L13: 0.1094 L23: 0.3162 REMARK 3 S TENSOR REMARK 3 S11: -0.0504 S12: 0.0431 S13: 0.0121 REMARK 3 S21: -0.1081 S22: 0.1049 S23: -0.0903 REMARK 3 S31: 0.1216 S32: -0.0568 S33: -0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 95 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.8460 -48.3681 -9.0607 REMARK 3 T TENSOR REMARK 3 T11: 0.3318 T22: 0.3853 REMARK 3 T33: 0.2516 T12: -0.0716 REMARK 3 T13: 0.0312 T23: 0.0536 REMARK 3 L TENSOR REMARK 3 L11: -0.0421 L22: 0.2962 REMARK 3 L33: 0.3507 L12: 0.4686 REMARK 3 L13: -0.1414 L23: -0.2799 REMARK 3 S TENSOR REMARK 3 S11: 0.1911 S12: 0.2173 S13: 0.0594 REMARK 3 S21: -0.0439 S22: 0.0835 S23: 0.0881 REMARK 3 S31: 0.0993 S32: -0.4099 S33: -0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 130 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.3998 -26.4612 -21.6598 REMARK 3 T TENSOR REMARK 3 T11: 0.1319 T22: 0.1266 REMARK 3 T33: 0.2243 T12: 0.0212 REMARK 3 T13: -0.0085 T23: -0.0326 REMARK 3 L TENSOR REMARK 3 L11: 0.3919 L22: 0.0110 REMARK 3 L33: 0.9081 L12: -0.2471 REMARK 3 L13: 0.1762 L23: 0.3096 REMARK 3 S TENSOR REMARK 3 S11: -0.1607 S12: 0.0077 S13: -0.0418 REMARK 3 S21: -0.2007 S22: 0.1233 S23: -0.0908 REMARK 3 S31: -0.0331 S32: 0.0503 S33: -0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 3 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.2717 -9.3241 -54.7581 REMARK 3 T TENSOR REMARK 3 T11: 0.2312 T22: 0.2082 REMARK 3 T33: 0.1823 T12: -0.0402 REMARK 3 T13: 0.0461 T23: 0.0105 REMARK 3 L TENSOR REMARK 3 L11: 1.1389 L22: 1.0684 REMARK 3 L33: 1.5108 L12: -0.2850 REMARK 3 L13: -0.4613 L23: -0.1521 REMARK 3 S TENSOR REMARK 3 S11: -0.1195 S12: -0.0706 S13: -0.1973 REMARK 3 S21: 0.0463 S22: -0.1007 S23: -0.0431 REMARK 3 S31: 0.1609 S32: -0.2136 S33: -0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 95 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.7551 12.3526 -48.0077 REMARK 3 T TENSOR REMARK 3 T11: 0.4042 T22: 0.3604 REMARK 3 T33: 0.3776 T12: 0.0522 REMARK 3 T13: -0.0135 T23: -0.0607 REMARK 3 L TENSOR REMARK 3 L11: 0.0135 L22: 0.2775 REMARK 3 L33: 0.1668 L12: 0.0113 REMARK 3 L13: -0.2631 L23: 0.2615 REMARK 3 S TENSOR REMARK 3 S11: 0.0102 S12: 0.1337 S13: -0.1516 REMARK 3 S21: 0.1043 S22: 0.0022 S23: 0.0677 REMARK 3 S31: 0.0188 S32: 0.0318 S33: 0.0000 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 126 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.4889 -13.1289 -58.4600 REMARK 3 T TENSOR REMARK 3 T11: -0.3014 T22: -0.3932 REMARK 3 T33: 0.0206 T12: 0.3235 REMARK 3 T13: 0.1910 T23: -0.3510 REMARK 3 L TENSOR REMARK 3 L11: 0.2920 L22: -0.0396 REMARK 3 L33: 1.0369 L12: 0.2801 REMARK 3 L13: 0.4524 L23: 0.0808 REMARK 3 S TENSOR REMARK 3 S11: 0.0908 S12: 1.1960 S13: 0.2647 REMARK 3 S21: -0.5964 S22: 0.3349 S23: 0.2379 REMARK 3 S31: 1.5498 S32: -1.5241 S33: 0.0000 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 3 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.9542 1.5908 -72.0971 REMARK 3 T TENSOR REMARK 3 T11: 0.2305 T22: 0.2145 REMARK 3 T33: 0.1699 T12: 0.0231 REMARK 3 T13: -0.0181 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 1.0530 L22: 0.7242 REMARK 3 L33: 0.9268 L12: 0.5854 REMARK 3 L13: 0.6336 L23: 0.4689 REMARK 3 S TENSOR REMARK 3 S11: -0.0943 S12: 0.2128 S13: 0.0077 REMARK 3 S21: -0.0620 S22: 0.0675 S23: -0.0581 REMARK 3 S31: 0.0130 S32: 0.0775 S33: -0.0000 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 95 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.0562 19.6408 -62.0356 REMARK 3 T TENSOR REMARK 3 T11: 0.0958 T22: -0.6078 REMARK 3 T33: 0.5683 T12: -0.3476 REMARK 3 T13: -0.0279 T23: -0.0167 REMARK 3 L TENSOR REMARK 3 L11: 0.2791 L22: 0.4176 REMARK 3 L33: 0.0585 L12: -0.0204 REMARK 3 L13: 0.2864 L23: 0.0170 REMARK 3 S TENSOR REMARK 3 S11: -0.3254 S12: 0.5332 S13: 0.9385 REMARK 3 S21: 0.2925 S22: 0.1410 S23: -0.5702 REMARK 3 S31: 0.7607 S32: 0.9614 S33: 0.0000 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 130 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.6791 -12.0960 -64.5232 REMARK 3 T TENSOR REMARK 3 T11: 0.3585 T22: -0.0277 REMARK 3 T33: 0.2343 T12: -0.1080 REMARK 3 T13: -0.0200 T23: -0.1424 REMARK 3 L TENSOR REMARK 3 L11: 0.2805 L22: 0.2564 REMARK 3 L33: 0.4919 L12: -0.4383 REMARK 3 L13: 0.4653 L23: 0.5759 REMARK 3 S TENSOR REMARK 3 S11: 0.1229 S12: 0.0907 S13: -0.0967 REMARK 3 S21: -0.5311 S22: -0.5017 S23: -0.1468 REMARK 3 S31: 0.5647 S32: 0.6186 S33: -0.0000 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 2 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.8115 -10.3967 -54.3088 REMARK 3 T TENSOR REMARK 3 T11: 0.2367 T22: 0.1243 REMARK 3 T33: 0.1524 T12: -0.0125 REMARK 3 T13: -0.0126 T23: -0.0116 REMARK 3 L TENSOR REMARK 3 L11: 1.2192 L22: 0.9623 REMARK 3 L33: 1.4659 L12: -0.5897 REMARK 3 L13: 0.0999 L23: -0.2491 REMARK 3 S TENSOR REMARK 3 S11: 0.0941 S12: 0.0586 S13: 0.0274 REMARK 3 S21: 0.1011 S22: -0.0175 S23: -0.0778 REMARK 3 S31: 0.1902 S32: -0.0389 S33: 0.0000 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 95 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.7849 3.1308 -36.7113 REMARK 3 T TENSOR REMARK 3 T11: 0.4014 T22: 0.2413 REMARK 3 T33: 0.2533 T12: -0.0417 REMARK 3 T13: -0.0642 T23: -0.0126 REMARK 3 L TENSOR REMARK 3 L11: 0.0758 L22: 0.3156 REMARK 3 L33: 0.2411 L12: 0.2160 REMARK 3 L13: 0.2363 L23: 0.1946 REMARK 3 S TENSOR REMARK 3 S11: 0.1506 S12: -0.2926 S13: 0.0157 REMARK 3 S21: -0.2921 S22: -0.3625 S23: -0.1086 REMARK 3 S31: 0.2050 S32: -0.1323 S33: -0.0000 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 130 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.1027 -9.5946 -69.8486 REMARK 3 T TENSOR REMARK 3 T11: 0.2956 T22: 0.1735 REMARK 3 T33: 0.2206 T12: -0.0059 REMARK 3 T13: 0.0215 T23: -0.0258 REMARK 3 L TENSOR REMARK 3 L11: 0.7306 L22: 0.6836 REMARK 3 L33: 0.3772 L12: 0.2308 REMARK 3 L13: -1.1010 L23: 0.3030 REMARK 3 S TENSOR REMARK 3 S11: -0.1150 S12: 0.1973 S13: -0.1639 REMARK 3 S21: -0.0740 S22: 0.1242 S23: 0.0802 REMARK 3 S31: 0.1871 S32: -0.0805 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WRK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000203772. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : CONFOCAL COLLIMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22585 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 19.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.100 REMARK 200 R MERGE (I) : 0.20800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.35800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4GV8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE, 15 - 41.5% MPD, REMARK 280 0.02M CALCIUM CHLORIDE, PH 4.6, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.52500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 54.21000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 54.21000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 125.28750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 54.21000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 54.21000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 41.76250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 54.21000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.21000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 125.28750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 54.21000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.21000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 41.76250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 83.52500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -87.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 160 REMARK 465 GLU A 161 REMARK 465 LYS A 162 REMARK 465 GLY A 163 REMARK 465 PHE A 164 REMARK 465 GLY A 165 REMARK 465 SER A 166 REMARK 465 SER A 167 REMARK 465 GLY A 168 REMARK 465 VAL A 169 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 SER B 157 REMARK 465 GLU B 158 REMARK 465 ARG B 159 REMARK 465 GLY B 160 REMARK 465 GLU B 161 REMARK 465 LYS B 162 REMARK 465 GLY B 163 REMARK 465 GLY B 165 REMARK 465 SER B 166 REMARK 465 SER B 167 REMARK 465 GLY B 168 REMARK 465 VAL B 169 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 VAL C 156 REMARK 465 SER C 157 REMARK 465 GLU C 158 REMARK 465 ARG C 159 REMARK 465 GLY C 160 REMARK 465 GLU C 161 REMARK 465 LYS C 162 REMARK 465 GLY C 163 REMARK 465 PHE C 164 REMARK 465 GLY C 165 REMARK 465 SER C 166 REMARK 465 SER C 167 REMARK 465 GLY C 168 REMARK 465 VAL C 169 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 VAL D 156 REMARK 465 SER D 157 REMARK 465 GLU D 158 REMARK 465 ARG D 159 REMARK 465 GLY D 160 REMARK 465 GLU D 161 REMARK 465 LYS D 162 REMARK 465 GLY D 163 REMARK 465 PHE D 164 REMARK 465 GLY D 165 REMARK 465 SER D 166 REMARK 465 SER D 167 REMARK 465 GLY D 168 REMARK 465 VAL D 169 REMARK 465 MET E 1 REMARK 465 THR E 2 REMARK 465 SER E 155 REMARK 465 VAL E 156 REMARK 465 SER E 157 REMARK 465 GLU E 158 REMARK 465 ARG E 159 REMARK 465 GLY E 160 REMARK 465 GLU E 161 REMARK 465 LYS E 162 REMARK 465 GLY E 163 REMARK 465 GLY E 165 REMARK 465 SER E 166 REMARK 465 SER E 167 REMARK 465 GLY E 168 REMARK 465 VAL E 169 REMARK 465 MET F 1 REMARK 465 VAL F 156 REMARK 465 SER F 157 REMARK 465 GLU F 158 REMARK 465 ARG F 159 REMARK 465 GLY F 160 REMARK 465 GLU F 161 REMARK 465 LYS F 162 REMARK 465 GLY F 163 REMARK 465 GLY F 165 REMARK 465 SER F 166 REMARK 465 SER F 167 REMARK 465 GLY F 168 REMARK 465 VAL F 169 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 3 CG OD1 ND2 REMARK 470 GLU A 12 CG CD OE1 OE2 REMARK 470 ASN A 20 OD1 ND2 REMARK 470 LYS A 22 CG CD CE NZ REMARK 470 LYS A 46 CE NZ REMARK 470 LYS A 70 NZ REMARK 470 LYS A 79 CD CE NZ REMARK 470 SER A 99 OG REMARK 470 ASN A 100 CG OD1 ND2 REMARK 470 TYR A 102 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 THR A 104 OG1 CG2 REMARK 470 LYS A 111 CE NZ REMARK 470 LEU A 116 CG CD1 CD2 REMARK 470 LYS A 148 CG CD CE NZ REMARK 470 GLU A 151 CG CD OE1 OE2 REMARK 470 ARG A 159 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 12 CG CD OE1 OE2 REMARK 470 ASN B 20 CG OD1 ND2 REMARK 470 LYS B 22 CG CD CE NZ REMARK 470 LYS B 46 CD CE NZ REMARK 470 LYS B 70 CE NZ REMARK 470 LYS B 79 NZ REMARK 470 ASN B 100 CG OD1 ND2 REMARK 470 LEU B 116 CG CD1 CD2 REMARK 470 ASP B 118 CG OD1 OD2 REMARK 470 LYS B 148 CG CD CE NZ REMARK 470 GLU B 151 CG CD OE1 OE2 REMARK 470 GLU B 154 CG CD OE1 OE2 REMARK 470 SER B 155 OG REMARK 470 VAL B 156 CG1 CG2 REMARK 470 GLU C 12 CG CD OE1 OE2 REMARK 470 HIS C 21 CG ND1 CD2 CE1 NE2 REMARK 470 LYS C 22 CG CD CE NZ REMARK 470 THR C 23 OG1 CG2 REMARK 470 LYS C 46 CD CE NZ REMARK 470 GLU C 55 CG CD OE1 OE2 REMARK 470 LYS C 70 NZ REMARK 470 SER C 99 OG REMARK 470 ASN C 100 CG OD1 ND2 REMARK 470 LYS C 111 CG CD CE NZ REMARK 470 LEU C 116 CG CD1 CD2 REMARK 470 GLU C 146 CG CD OE1 OE2 REMARK 470 LYS C 148 CG CD CE NZ REMARK 470 GLU D 12 CG CD OE1 OE2 REMARK 470 LYS D 22 CG CD CE NZ REMARK 470 THR D 23 OG1 CG2 REMARK 470 VAL D 36 CG1 CG2 REMARK 470 GLU D 55 CG CD OE1 OE2 REMARK 470 LYS D 70 NZ REMARK 470 LYS D 79 NZ REMARK 470 ILE D 97 CG1 CG2 CD1 REMARK 470 SER D 99 OG REMARK 470 ASN D 100 CG OD1 ND2 REMARK 470 TYR D 102 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 THR D 104 OG1 CG2 REMARK 470 LYS D 111 CG CD CE NZ REMARK 470 LEU D 116 CG CD1 CD2 REMARK 470 LYS D 148 CG CD CE NZ REMARK 470 GLU D 151 CG CD OE1 OE2 REMARK 470 GLU D 152 CG CD OE1 OE2 REMARK 470 GLU D 154 CG CD OE1 OE2 REMARK 470 SER D 155 OG REMARK 470 ASN E 20 CG OD1 ND2 REMARK 470 LYS E 22 CG CD CE NZ REMARK 470 LYS E 46 CD CE NZ REMARK 470 GLU E 55 CG CD OE1 OE2 REMARK 470 LYS E 70 NZ REMARK 470 SER E 99 OG REMARK 470 ASN E 100 CG OD1 ND2 REMARK 470 LYS E 111 CE NZ REMARK 470 LEU E 116 CG CD1 CD2 REMARK 470 GLU E 146 CG CD OE1 OE2 REMARK 470 LYS E 148 CG CD CE NZ REMARK 470 GLU E 151 CG CD OE1 OE2 REMARK 470 GLU E 152 CG CD OE1 OE2 REMARK 470 GLU E 154 CG CD OE1 OE2 REMARK 470 GLU F 12 CG CD OE1 OE2 REMARK 470 ASN F 20 CG OD1 ND2 REMARK 470 HIS F 21 CG ND1 CD2 CE1 NE2 REMARK 470 LYS F 22 CG CD CE NZ REMARK 470 LYS F 46 CD CE NZ REMARK 470 LYS F 70 NZ REMARK 470 SER F 99 OG REMARK 470 ASN F 100 CG OD1 ND2 REMARK 470 TYR F 102 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS F 111 CG CD CE NZ REMARK 470 LYS F 148 CG CD CE NZ REMARK 470 GLU F 152 CG CD OE1 OE2 REMARK 470 GLU F 154 CG CD OE1 OE2 REMARK 470 SER F 155 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 3 18.22 56.95 REMARK 500 LYS A 22 -8.62 -51.76 REMARK 500 ASN A 100 -122.75 54.84 REMARK 500 LYS B 22 -7.86 -57.87 REMARK 500 LYS C 22 -9.84 72.07 REMARK 500 ALA E 98 -16.03 -49.87 REMARK 500 SER E 99 -10.68 71.52 REMARK 500 ASN F 20 -118.93 54.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DUP A 201 O1A REMARK 620 2 DUP A 201 O1B 75.5 REMARK 620 3 DUP A 201 O2G 86.0 84.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DUP B 201 O2A REMARK 620 2 DUP B 201 O1B 82.5 REMARK 620 3 HOH B 301 O 145.7 103.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DUP C 201 O1A REMARK 620 2 DUP C 201 O1B 79.9 REMARK 620 3 DUP C 201 O3G 83.6 70.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DUP D 201 O1A REMARK 620 2 DUP D 201 O1B 69.0 REMARK 620 3 DUP D 201 O1G 76.8 79.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DUP D 202 O2A REMARK 620 2 DUP D 202 O1B 66.0 REMARK 620 3 DUP D 202 O2G 75.5 67.8 REMARK 620 4 HOH F 309 O 87.3 76.8 144.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DUP F 201 O1A REMARK 620 2 DUP F 201 O1B 73.9 REMARK 620 3 DUP F 201 O3G 66.9 75.4 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DUP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DUP B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DUP C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DUP D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DUP D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DUP F 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GV8 RELATED DB: PDB REMARK 900 WILD TYPE PHI11 DUTPASE DBREF 4WRK A 1 169 UNP Q8SDV3 Q8SDV3_BPPHA 1 169 DBREF 4WRK B 1 169 UNP Q8SDV3 Q8SDV3_BPPHA 1 169 DBREF 4WRK C 1 169 UNP Q8SDV3 Q8SDV3_BPPHA 1 169 DBREF 4WRK D 1 169 UNP Q8SDV3 Q8SDV3_BPPHA 1 169 DBREF 4WRK E 1 169 UNP Q8SDV3 Q8SDV3_BPPHA 1 169 DBREF 4WRK F 1 169 UNP Q8SDV3 Q8SDV3_BPPHA 1 169 SEQADV 4WRK ASN A 95 UNP Q8SDV3 ASP 95 ENGINEERED MUTATION SEQADV 4WRK ASN B 95 UNP Q8SDV3 ASP 95 ENGINEERED MUTATION SEQADV 4WRK ASN C 95 UNP Q8SDV3 ASP 95 ENGINEERED MUTATION SEQADV 4WRK ASN D 95 UNP Q8SDV3 ASP 95 ENGINEERED MUTATION SEQADV 4WRK ASN E 95 UNP Q8SDV3 ASP 95 ENGINEERED MUTATION SEQADV 4WRK ASN F 95 UNP Q8SDV3 ASP 95 ENGINEERED MUTATION SEQRES 1 A 169 MET THR ASN THR LEU GLN VAL ARG LEU LEU SER GLU ASN SEQRES 2 A 169 ALA ARG MET PRO GLU ARG ASN HIS LYS THR ASP ALA GLY SEQRES 3 A 169 TYR ASP ILE PHE SER ALA GLU THR VAL VAL LEU GLU PRO SEQRES 4 A 169 GLN GLU LYS ALA VAL ILE LYS THR ASP VAL ALA VAL SER SEQRES 5 A 169 ILE PRO GLU GLY TYR VAL GLY LEU LEU THR SER ARG SER SEQRES 6 A 169 GLY VAL SER SER LYS THR HIS LEU VAL ILE GLU THR GLY SEQRES 7 A 169 LYS ILE ASP ALA GLY TYR HIS GLY ASN LEU GLY ILE ASN SEQRES 8 A 169 ILE LYS ASN ASN ALA ILE ALA SER ASN GLY TYR ILE THR SEQRES 9 A 169 PRO GLY VAL PHE ASP ILE LYS GLY GLU ILE ASP LEU SER SEQRES 10 A 169 ASP ALA ILE ARG GLN TYR GLY THR TYR GLN ILE ASN GLU SEQRES 11 A 169 GLY ASP LYS LEU ALA GLN LEU VAL ILE VAL PRO ILE TRP SEQRES 12 A 169 THR PRO GLU LEU LYS GLN VAL GLU GLU PHE GLU SER VAL SEQRES 13 A 169 SER GLU ARG GLY GLU LYS GLY PHE GLY SER SER GLY VAL SEQRES 1 B 169 MET THR ASN THR LEU GLN VAL ARG LEU LEU SER GLU ASN SEQRES 2 B 169 ALA ARG MET PRO GLU ARG ASN HIS LYS THR ASP ALA GLY SEQRES 3 B 169 TYR ASP ILE PHE SER ALA GLU THR VAL VAL LEU GLU PRO SEQRES 4 B 169 GLN GLU LYS ALA VAL ILE LYS THR ASP VAL ALA VAL SER SEQRES 5 B 169 ILE PRO GLU GLY TYR VAL GLY LEU LEU THR SER ARG SER SEQRES 6 B 169 GLY VAL SER SER LYS THR HIS LEU VAL ILE GLU THR GLY SEQRES 7 B 169 LYS ILE ASP ALA GLY TYR HIS GLY ASN LEU GLY ILE ASN SEQRES 8 B 169 ILE LYS ASN ASN ALA ILE ALA SER ASN GLY TYR ILE THR SEQRES 9 B 169 PRO GLY VAL PHE ASP ILE LYS GLY GLU ILE ASP LEU SER SEQRES 10 B 169 ASP ALA ILE ARG GLN TYR GLY THR TYR GLN ILE ASN GLU SEQRES 11 B 169 GLY ASP LYS LEU ALA GLN LEU VAL ILE VAL PRO ILE TRP SEQRES 12 B 169 THR PRO GLU LEU LYS GLN VAL GLU GLU PHE GLU SER VAL SEQRES 13 B 169 SER GLU ARG GLY GLU LYS GLY PHE GLY SER SER GLY VAL SEQRES 1 C 169 MET THR ASN THR LEU GLN VAL ARG LEU LEU SER GLU ASN SEQRES 2 C 169 ALA ARG MET PRO GLU ARG ASN HIS LYS THR ASP ALA GLY SEQRES 3 C 169 TYR ASP ILE PHE SER ALA GLU THR VAL VAL LEU GLU PRO SEQRES 4 C 169 GLN GLU LYS ALA VAL ILE LYS THR ASP VAL ALA VAL SER SEQRES 5 C 169 ILE PRO GLU GLY TYR VAL GLY LEU LEU THR SER ARG SER SEQRES 6 C 169 GLY VAL SER SER LYS THR HIS LEU VAL ILE GLU THR GLY SEQRES 7 C 169 LYS ILE ASP ALA GLY TYR HIS GLY ASN LEU GLY ILE ASN SEQRES 8 C 169 ILE LYS ASN ASN ALA ILE ALA SER ASN GLY TYR ILE THR SEQRES 9 C 169 PRO GLY VAL PHE ASP ILE LYS GLY GLU ILE ASP LEU SER SEQRES 10 C 169 ASP ALA ILE ARG GLN TYR GLY THR TYR GLN ILE ASN GLU SEQRES 11 C 169 GLY ASP LYS LEU ALA GLN LEU VAL ILE VAL PRO ILE TRP SEQRES 12 C 169 THR PRO GLU LEU LYS GLN VAL GLU GLU PHE GLU SER VAL SEQRES 13 C 169 SER GLU ARG GLY GLU LYS GLY PHE GLY SER SER GLY VAL SEQRES 1 D 169 MET THR ASN THR LEU GLN VAL ARG LEU LEU SER GLU ASN SEQRES 2 D 169 ALA ARG MET PRO GLU ARG ASN HIS LYS THR ASP ALA GLY SEQRES 3 D 169 TYR ASP ILE PHE SER ALA GLU THR VAL VAL LEU GLU PRO SEQRES 4 D 169 GLN GLU LYS ALA VAL ILE LYS THR ASP VAL ALA VAL SER SEQRES 5 D 169 ILE PRO GLU GLY TYR VAL GLY LEU LEU THR SER ARG SER SEQRES 6 D 169 GLY VAL SER SER LYS THR HIS LEU VAL ILE GLU THR GLY SEQRES 7 D 169 LYS ILE ASP ALA GLY TYR HIS GLY ASN LEU GLY ILE ASN SEQRES 8 D 169 ILE LYS ASN ASN ALA ILE ALA SER ASN GLY TYR ILE THR SEQRES 9 D 169 PRO GLY VAL PHE ASP ILE LYS GLY GLU ILE ASP LEU SER SEQRES 10 D 169 ASP ALA ILE ARG GLN TYR GLY THR TYR GLN ILE ASN GLU SEQRES 11 D 169 GLY ASP LYS LEU ALA GLN LEU VAL ILE VAL PRO ILE TRP SEQRES 12 D 169 THR PRO GLU LEU LYS GLN VAL GLU GLU PHE GLU SER VAL SEQRES 13 D 169 SER GLU ARG GLY GLU LYS GLY PHE GLY SER SER GLY VAL SEQRES 1 E 169 MET THR ASN THR LEU GLN VAL ARG LEU LEU SER GLU ASN SEQRES 2 E 169 ALA ARG MET PRO GLU ARG ASN HIS LYS THR ASP ALA GLY SEQRES 3 E 169 TYR ASP ILE PHE SER ALA GLU THR VAL VAL LEU GLU PRO SEQRES 4 E 169 GLN GLU LYS ALA VAL ILE LYS THR ASP VAL ALA VAL SER SEQRES 5 E 169 ILE PRO GLU GLY TYR VAL GLY LEU LEU THR SER ARG SER SEQRES 6 E 169 GLY VAL SER SER LYS THR HIS LEU VAL ILE GLU THR GLY SEQRES 7 E 169 LYS ILE ASP ALA GLY TYR HIS GLY ASN LEU GLY ILE ASN SEQRES 8 E 169 ILE LYS ASN ASN ALA ILE ALA SER ASN GLY TYR ILE THR SEQRES 9 E 169 PRO GLY VAL PHE ASP ILE LYS GLY GLU ILE ASP LEU SER SEQRES 10 E 169 ASP ALA ILE ARG GLN TYR GLY THR TYR GLN ILE ASN GLU SEQRES 11 E 169 GLY ASP LYS LEU ALA GLN LEU VAL ILE VAL PRO ILE TRP SEQRES 12 E 169 THR PRO GLU LEU LYS GLN VAL GLU GLU PHE GLU SER VAL SEQRES 13 E 169 SER GLU ARG GLY GLU LYS GLY PHE GLY SER SER GLY VAL SEQRES 1 F 169 MET THR ASN THR LEU GLN VAL ARG LEU LEU SER GLU ASN SEQRES 2 F 169 ALA ARG MET PRO GLU ARG ASN HIS LYS THR ASP ALA GLY SEQRES 3 F 169 TYR ASP ILE PHE SER ALA GLU THR VAL VAL LEU GLU PRO SEQRES 4 F 169 GLN GLU LYS ALA VAL ILE LYS THR ASP VAL ALA VAL SER SEQRES 5 F 169 ILE PRO GLU GLY TYR VAL GLY LEU LEU THR SER ARG SER SEQRES 6 F 169 GLY VAL SER SER LYS THR HIS LEU VAL ILE GLU THR GLY SEQRES 7 F 169 LYS ILE ASP ALA GLY TYR HIS GLY ASN LEU GLY ILE ASN SEQRES 8 F 169 ILE LYS ASN ASN ALA ILE ALA SER ASN GLY TYR ILE THR SEQRES 9 F 169 PRO GLY VAL PHE ASP ILE LYS GLY GLU ILE ASP LEU SER SEQRES 10 F 169 ASP ALA ILE ARG GLN TYR GLY THR TYR GLN ILE ASN GLU SEQRES 11 F 169 GLY ASP LYS LEU ALA GLN LEU VAL ILE VAL PRO ILE TRP SEQRES 12 F 169 THR PRO GLU LEU LYS GLN VAL GLU GLU PHE GLU SER VAL SEQRES 13 F 169 SER GLU ARG GLY GLU LYS GLY PHE GLY SER SER GLY VAL HET DUP A 201 28 HET MG A 202 1 HET DUP B 201 28 HET MG B 202 1 HET DUP C 201 28 HET MG C 202 1 HET DUP D 201 28 HET DUP D 202 28 HET MG D 203 1 HET MG E 201 1 HET DUP F 201 28 HET MG F 202 1 HETNAM DUP 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 7 DUP 6(C9 H16 N3 O13 P3) FORMUL 8 MG 6(MG 2+) FORMUL 19 HOH *101(H2 O) HELIX 1 AA1 ARG A 64 THR A 71 1 8 HELIX 2 AA2 ARG B 64 THR B 71 1 8 HELIX 3 AA3 ARG C 64 THR C 71 1 8 HELIX 4 AA4 ARG D 64 THR D 71 1 8 HELIX 5 AA5 ARG E 64 THR E 71 1 8 HELIX 6 AA6 ALA E 98 GLY E 101 5 4 HELIX 7 AA7 ARG F 64 THR F 71 1 8 SHEET 1 AA1 3 VAL A 49 VAL A 51 0 SHEET 2 AA1 3 THR A 4 LEU A 9 -1 N ARG A 8 O ALA A 50 SHEET 3 AA1 3 GLU B 146 GLN B 149 1 O GLU B 146 N LEU A 5 SHEET 1 AA2 4 TYR A 27 PHE A 30 0 SHEET 2 AA2 4 LYS A 133 PRO A 141 -1 O ALA A 135 N ILE A 29 SHEET 3 AA2 4 TYR A 57 SER A 63 -1 N THR A 62 O GLN A 136 SHEET 4 AA2 4 GLY A 78 ILE A 80 -1 O ILE A 80 N GLY A 59 SHEET 1 AA3 2 VAL A 35 LEU A 37 0 SHEET 2 AA3 2 TYR A 126 ILE A 128 -1 O TYR A 126 N LEU A 37 SHEET 1 AA4 3 LYS A 42 LYS A 46 0 SHEET 2 AA4 3 GLY A 89 ASN A 94 -1 O ILE A 90 N ILE A 45 SHEET 3 AA4 3 LEU A 73 ILE A 75 -1 N VAL A 74 O LYS A 93 SHEET 1 AA5 2 ILE A 103 PHE A 108 0 SHEET 2 AA5 2 ILE A 114 GLN A 122 -1 O ASP A 115 N VAL A 107 SHEET 1 AA6 3 GLU A 146 GLN A 149 0 SHEET 2 AA6 3 THR C 4 LEU C 9 1 O LEU C 5 N GLU A 146 SHEET 3 AA6 3 VAL C 49 SER C 52 -1 O ALA C 50 N ARG C 8 SHEET 1 AA7 3 VAL B 49 SER B 52 0 SHEET 2 AA7 3 THR B 4 LEU B 9 -1 N ARG B 8 O ALA B 50 SHEET 3 AA7 3 GLU C 146 VAL C 150 1 O GLU C 146 N LEU B 5 SHEET 1 AA8 4 TYR B 27 PHE B 30 0 SHEET 2 AA8 4 LYS B 133 PRO B 141 -1 O ALA B 135 N ILE B 29 SHEET 3 AA8 4 TYR B 57 SER B 63 -1 N THR B 62 O GLN B 136 SHEET 4 AA8 4 GLY B 78 ILE B 80 -1 O GLY B 78 N LEU B 61 SHEET 1 AA9 2 VAL B 35 LEU B 37 0 SHEET 2 AA9 2 TYR B 126 ILE B 128 -1 O TYR B 126 N LEU B 37 SHEET 1 AB1 3 LYS B 42 LYS B 46 0 SHEET 2 AB1 3 GLY B 89 ASN B 94 -1 O ILE B 90 N ILE B 45 SHEET 3 AB1 3 LEU B 73 ILE B 75 -1 N VAL B 74 O LYS B 93 SHEET 1 AB2 2 ILE B 103 PHE B 108 0 SHEET 2 AB2 2 ILE B 114 GLN B 122 -1 O ASP B 115 N VAL B 107 SHEET 1 AB3 4 GLY C 26 PHE C 30 0 SHEET 2 AB3 4 LYS C 133 PRO C 141 -1 O ALA C 135 N ILE C 29 SHEET 3 AB3 4 TYR C 57 SER C 63 -1 N THR C 62 O GLN C 136 SHEET 4 AB3 4 GLY C 78 ILE C 80 -1 O GLY C 78 N LEU C 61 SHEET 1 AB4 2 VAL C 35 LEU C 37 0 SHEET 2 AB4 2 TYR C 126 ILE C 128 -1 O TYR C 126 N LEU C 37 SHEET 1 AB5 3 LYS C 42 LYS C 46 0 SHEET 2 AB5 3 GLY C 89 ASN C 94 -1 O ILE C 92 N ALA C 43 SHEET 3 AB5 3 LEU C 73 ILE C 75 -1 N VAL C 74 O LYS C 93 SHEET 1 AB6 2 ILE C 103 PHE C 108 0 SHEET 2 AB6 2 ILE C 114 GLN C 122 -1 O ARG C 121 N THR C 104 SHEET 1 AB7 3 VAL D 49 SER D 52 0 SHEET 2 AB7 3 THR D 4 LEU D 9 -1 N ARG D 8 O ALA D 50 SHEET 3 AB7 3 GLU E 146 GLN E 149 1 O GLU E 146 N LEU D 5 SHEET 1 AB8 4 TYR D 27 PHE D 30 0 SHEET 2 AB8 4 LYS D 133 PRO D 141 -1 O ALA D 135 N ILE D 29 SHEET 3 AB8 4 TYR D 57 THR D 62 -1 N THR D 62 O GLN D 136 SHEET 4 AB8 4 GLY D 78 ILE D 80 -1 O ILE D 80 N GLY D 59 SHEET 1 AB9 2 VAL D 35 LEU D 37 0 SHEET 2 AB9 2 TYR D 126 ILE D 128 -1 O TYR D 126 N LEU D 37 SHEET 1 AC1 3 LYS D 42 LYS D 46 0 SHEET 2 AC1 3 GLY D 89 ASN D 94 -1 O ILE D 92 N ALA D 43 SHEET 3 AC1 3 LEU D 73 ILE D 75 -1 N VAL D 74 O LYS D 93 SHEET 1 AC2 2 ILE D 103 PHE D 108 0 SHEET 2 AC2 2 ILE D 114 GLN D 122 -1 O ASP D 115 N VAL D 107 SHEET 1 AC3 3 GLU D 146 GLN D 149 0 SHEET 2 AC3 3 THR F 4 LEU F 9 1 O LEU F 5 N GLU D 146 SHEET 3 AC3 3 VAL F 49 SER F 52 -1 O ALA F 50 N ARG F 8 SHEET 1 AC4 3 VAL E 49 SER E 52 0 SHEET 2 AC4 3 THR E 4 LEU E 9 -1 N ARG E 8 O ALA E 50 SHEET 3 AC4 3 GLU F 146 GLN F 149 1 O LYS F 148 N VAL E 7 SHEET 1 AC5 4 TYR E 27 PHE E 30 0 SHEET 2 AC5 4 LYS E 133 PRO E 141 -1 O ALA E 135 N ILE E 29 SHEET 3 AC5 4 TYR E 57 SER E 63 -1 N THR E 62 O GLN E 136 SHEET 4 AC5 4 GLY E 78 ILE E 80 -1 O ILE E 80 N GLY E 59 SHEET 1 AC6 2 VAL E 35 LEU E 37 0 SHEET 2 AC6 2 TYR E 126 ILE E 128 -1 O ILE E 128 N VAL E 35 SHEET 1 AC7 3 LYS E 42 LYS E 46 0 SHEET 2 AC7 3 GLY E 89 ASN E 94 -1 O ILE E 92 N ALA E 43 SHEET 3 AC7 3 LEU E 73 ILE E 75 -1 N VAL E 74 O LYS E 93 SHEET 1 AC8 2 ILE E 103 PHE E 108 0 SHEET 2 AC8 2 ILE E 114 GLN E 122 -1 O ASP E 115 N VAL E 107 SHEET 1 AC9 4 TYR F 27 PHE F 30 0 SHEET 2 AC9 4 LYS F 133 PRO F 141 -1 O ALA F 135 N ILE F 29 SHEET 3 AC9 4 TYR F 57 THR F 62 -1 N THR F 62 O GLN F 136 SHEET 4 AC9 4 GLY F 78 ILE F 80 -1 O GLY F 78 N LEU F 61 SHEET 1 AD1 2 VAL F 35 LEU F 37 0 SHEET 2 AD1 2 TYR F 126 ILE F 128 -1 O TYR F 126 N LEU F 37 SHEET 1 AD2 3 LYS F 42 LYS F 46 0 SHEET 2 AD2 3 GLY F 89 ASN F 94 -1 O ILE F 92 N ALA F 43 SHEET 3 AD2 3 LEU F 73 ILE F 75 -1 N VAL F 74 O LYS F 93 SHEET 1 AD3 2 ILE F 103 PHE F 108 0 SHEET 2 AD3 2 ILE F 114 GLN F 122 -1 O ASP F 115 N VAL F 107 LINK O1A DUP A 201 MG MG A 202 1555 1555 2.25 LINK O1B DUP A 201 MG MG A 202 1555 1555 2.12 LINK O2G DUP A 201 MG MG A 202 1555 1555 2.25 LINK O2A DUP B 201 MG MG B 202 1555 1555 1.84 LINK O1B DUP B 201 MG MG B 202 1555 1555 2.60 LINK MG MG B 202 O HOH B 301 1555 1555 1.87 LINK O1A DUP C 201 MG MG C 202 1555 1555 1.99 LINK O1B DUP C 201 MG MG C 202 1555 1555 2.44 LINK O3G DUP C 201 MG MG C 202 1555 1555 2.25 LINK O1A DUP D 201 MG MG D 203 1555 1555 2.70 LINK O1B DUP D 201 MG MG D 203 1555 1555 2.16 LINK O1G DUP D 201 MG MG D 203 1555 1555 2.25 LINK O2A DUP D 202 MG MG F 202 1555 1555 2.47 LINK O1B DUP D 202 MG MG F 202 1555 1555 2.54 LINK O2G DUP D 202 MG MG F 202 1555 1555 2.36 LINK MG MG E 201 O1A DUP F 201 1555 1555 2.52 LINK MG MG E 201 O1B DUP F 201 1555 1555 2.39 LINK MG MG E 201 O3G DUP F 201 1555 1555 2.58 LINK MG MG F 202 O HOH F 309 1555 1555 2.28 SITE 1 AC1 10 ARG A 64 SER A 65 GLY A 66 MG A 202 SITE 2 AC1 10 GLY B 78 LYS B 79 ILE B 80 ASP B 81 SITE 3 AC1 10 TYR B 84 GLY B 89 SITE 1 AC2 1 DUP A 201 SITE 1 AC3 12 ARG B 64 SER B 65 GLY B 66 GLN B 136 SITE 2 AC3 12 MG B 202 HOH B 302 GLY C 78 LYS C 79 SITE 3 AC3 12 ASP C 81 TYR C 84 GLY C 89 HOH C 307 SITE 1 AC4 2 DUP B 201 HOH B 301 SITE 1 AC5 11 LYS A 79 ILE A 80 ASP A 81 TYR A 84 SITE 2 AC5 11 GLY A 89 PHE B 164 ARG C 64 SER C 65 SITE 3 AC5 11 GLY C 66 GLN C 136 MG C 202 SITE 1 AC6 2 ASP C 28 DUP C 201 SITE 1 AC7 13 ARG D 64 SER D 65 GLY D 66 GLN D 136 SITE 2 AC7 13 MG D 203 HOH D 302 GLY E 78 LYS E 79 SITE 3 AC7 13 ILE E 80 ASP E 81 TYR E 84 GLY E 89 SITE 4 AC7 13 PHE F 164 SITE 1 AC8 13 GLY D 78 LYS D 79 ILE D 80 ASP D 81 SITE 2 AC8 13 TYR D 84 GLY D 89 PHE E 164 ARG F 64 SITE 3 AC8 13 SER F 65 GLY F 66 GLN F 136 MG F 202 SITE 4 AC8 13 HOH F 309 SITE 1 AC9 3 ASP D 28 GLN D 136 DUP D 201 SITE 1 AD1 1 DUP F 201 SITE 1 AD2 12 ARG E 64 SER E 65 GLY E 66 GLN E 136 SITE 2 AD2 12 MG E 201 GLY F 78 LYS F 79 ILE F 80 SITE 3 AD2 12 ASP F 81 TYR F 84 GLY F 89 HOH F 305 SITE 1 AD3 2 DUP D 202 HOH F 309 CRYST1 108.420 108.420 167.050 90.00 90.00 90.00 P 43 21 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009223 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009223 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005986 0.00000