HEADER HYDROLASE 30-OCT-14 4WTY TITLE STRUCTURE OF THE PTP-LIKE MYO-INOSITOL PHOSPHATASE FROM SELENOMONAS TITLE 2 RUMINANTIUM IN COMPLEX WITH MYO-INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYO-INOSITOL PHOSPHOHYDROLASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 28-346; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SELENOMONAS RUMINANTIUM; SOURCE 3 ORGANISM_TAXID: 971; SOURCE 4 GENE: PHYA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.M.BRUDER,S.C.MOSIMANN REVDAT 4 27-SEP-23 4WTY 1 REMARK REVDAT 3 08-JAN-20 4WTY 1 REMARK REVDAT 2 13-SEP-17 4WTY 1 REMARK REVDAT 1 04-NOV-15 4WTY 0 JRNL AUTH L.M.BRUDER,S.C.MOSIMANN JRNL TITL STRUCTURE OF THE PTP-LIKE PHYTASE FROM SELENOMONAS JRNL TITL 2 RUMINANTIUM IN COMPLEX WITH JRNL TITL 3 MYO-INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.J.GRUNINGER,S.DOBING,A.D.SMITH,L.M.BRUDER,L.B.SELINGER, REMARK 1 AUTH 2 H.J.WIEDEN,S.C.MOSIMANN REMARK 1 TITL SUBSTRATE BINDING IN PROTEIN-TYROSINE PHOSPHATASE-LIKE REMARK 1 TITL 2 INOSITOL POLYPHOSPHATASES. REMARK 1 REF J. BIOL. CHEM. 9722 2012 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 22139834 REMARK 1 DOI 10.1074/JBC.M111.309872 REMARK 1 REFERENCE 2 REMARK 1 AUTH R.J.GRUNINGER,L.B.SELINGER,S.C.MOSIMANN REMARK 1 TITL EFFECT OF IONIC STRENGTH AND OXIDATION ON THE P-LOOP REMARK 1 TITL 2 CONFORMATION OF THE PROTEIN TYROSINE PHOSPHATASE-LIKE REMARK 1 TITL 3 PHYTASE, PHYASR. REMARK 1 REF FEBS J. 3783 2008 REMARK 1 REFN ISSN 1742-464X REMARK 1 PMID 18573100 REMARK 1 DOI 10.1111/J.1742-4658.2008.06524.X REMARK 1 REFERENCE 3 REMARK 1 AUTH A.A.PUHL,R.J.GRUNINGER,R.GREINER,T.W.JANZEN,S.C.MOSIMANN, REMARK 1 AUTH 2 L.B.SELINGER REMARK 1 TITL KINETIC AND STRUCTURAL ANALYSIS OF A BACTERIAL PROTEIN REMARK 1 TITL 2 TYROSINE PHOSPHATASE-LIKE MYO-INOSITOL POLYPHOSPHATASE. REMARK 1 REF PROTEIN SCI. 1368 2007 REMARK 1 REFN ISSN 0961-8368 REMARK 1 PMID 17567745 REMARK 1 DOI 10.1110/PS.062738307 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 55187 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1797 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4021 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.2240 REMARK 3 BIN FREE R VALUE SET COUNT : 148 REMARK 3 BIN FREE R VALUE : 0.2060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5114 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 93 REMARK 3 SOLVENT ATOMS : 663 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.12000 REMARK 3 B22 (A**2) : -1.00000 REMARK 3 B33 (A**2) : 0.87000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.38000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.144 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.122 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.097 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.800 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5408 ; 0.005 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5005 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7335 ; 1.067 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11505 ; 0.586 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 636 ; 5.129 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 275 ;31.244 ;22.655 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 885 ;12.855 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 51 ;16.148 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 747 ; 0.057 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6071 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1344 ; 0.000 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2535 ; 2.680 ; 2.290 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2534 ; 2.670 ; 2.288 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3174 ; 3.896 ; 3.416 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3175 ; 3.898 ; 3.418 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2873 ; 4.305 ; 2.868 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2873 ; 4.297 ; 2.869 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4162 ; 6.652 ; 4.079 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 29344 ; 9.755 ;23.561 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 29003 ; 9.713 ;23.433 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4WTY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000204245. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56995 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 43.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.13500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.48100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3MMJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, SODIUM CHLORIDE, SODIUM REMARK 280 ACETATE, BETA-MERCAPTO ETHANOL,, PH 4.8, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 69.07500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 5 REMARK 465 GLY A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 HIS A 12 REMARK 465 HIS A 13 REMARK 465 HIS A 14 REMARK 465 SER A 15 REMARK 465 SER A 16 REMARK 465 GLY A 17 REMARK 465 LEU A 18 REMARK 465 VAL A 19 REMARK 465 PRO A 20 REMARK 465 ARG A 21 REMARK 465 GLY A 22 REMARK 465 SER A 23 REMARK 465 HIS A 24 REMARK 465 MET A 25 REMARK 465 ALA A 26 REMARK 465 SER A 27 REMARK 465 ALA A 28 REMARK 465 LYS A 29 REMARK 465 ALA A 30 REMARK 465 PRO A 31 REMARK 465 GLU A 32 REMARK 465 MET B 5 REMARK 465 GLY B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 HIS B 11 REMARK 465 HIS B 12 REMARK 465 HIS B 13 REMARK 465 HIS B 14 REMARK 465 SER B 15 REMARK 465 SER B 16 REMARK 465 GLY B 17 REMARK 465 LEU B 18 REMARK 465 VAL B 19 REMARK 465 PRO B 20 REMARK 465 ARG B 21 REMARK 465 GLY B 22 REMARK 465 SER B 23 REMARK 465 HIS B 24 REMARK 465 MET B 25 REMARK 465 ALA B 26 REMARK 465 SER B 27 REMARK 465 ALA B 28 REMARK 465 LYS B 29 REMARK 465 ALA B 30 REMARK 465 PRO B 31 REMARK 465 GLU B 32 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 677 O HOH B 763 2.17 REMARK 500 O HOH A 516 O HOH A 695 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 54 -10.74 -143.09 REMARK 500 HIS A 224 -13.09 85.60 REMARK 500 SER A 252 -153.77 -134.96 REMARK 500 VAL A 256 -84.80 -115.60 REMARK 500 PRO A 295 98.11 -69.89 REMARK 500 PHE B 54 -7.21 -142.93 REMARK 500 HIS B 224 -11.09 80.35 REMARK 500 SER B 252 -146.11 -133.19 REMARK 500 VAL B 256 -81.72 -116.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4IP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4IP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3MMJ RELATED DB: PDB REMARK 900 3MMJ CONTAINS THE SAME PROTEIN IN COMPLEX WITH ANOTHER SUBSTRATE DBREF 4WTY A 28 346 UNP Q7WUJ1 Q7WUJ1_SELRU 28 346 DBREF 4WTY B 28 346 UNP Q7WUJ1 Q7WUJ1_SELRU 28 346 SEQADV 4WTY MET A 5 UNP Q7WUJ1 INITIATING METHIONINE SEQADV 4WTY GLY A 6 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY SER A 7 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY SER A 8 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY HIS A 9 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY HIS A 10 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY HIS A 11 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY HIS A 12 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY HIS A 13 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY HIS A 14 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY SER A 15 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY SER A 16 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY GLY A 17 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY LEU A 18 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY VAL A 19 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY PRO A 20 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY ARG A 21 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY GLY A 22 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY SER A 23 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY HIS A 24 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY MET A 25 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY ALA A 26 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY SER A 27 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY SER A 252 UNP Q7WUJ1 CYS 252 ENGINEERED MUTATION SEQADV 4WTY MET B 5 UNP Q7WUJ1 INITIATING METHIONINE SEQADV 4WTY GLY B 6 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY SER B 7 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY SER B 8 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY HIS B 9 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY HIS B 10 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY HIS B 11 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY HIS B 12 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY HIS B 13 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY HIS B 14 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY SER B 15 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY SER B 16 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY GLY B 17 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY LEU B 18 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY VAL B 19 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY PRO B 20 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY ARG B 21 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY GLY B 22 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY SER B 23 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY HIS B 24 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY MET B 25 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY ALA B 26 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY SER B 27 UNP Q7WUJ1 EXPRESSION TAG SEQADV 4WTY SER B 252 UNP Q7WUJ1 CYS 252 ENGINEERED MUTATION SEQRES 1 A 342 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 342 LEU VAL PRO ARG GLY SER HIS MET ALA SER ALA LYS ALA SEQRES 3 A 342 PRO GLU GLN THR VAL THR GLU PRO VAL GLY SER TYR ALA SEQRES 4 A 342 ARG ALA GLU ARG PRO GLN ASP PHE GLU GLY PHE VAL TRP SEQRES 5 A 342 ARG LEU ASP ASN ASP GLY LYS GLU ALA LEU PRO ARG ASN SEQRES 6 A 342 PHE ARG THR SER ALA ASP ALA LEU ARG ALA PRO GLU LYS SEQRES 7 A 342 LYS PHE HIS LEU ASP ALA ALA TYR VAL PRO SER ARG GLU SEQRES 8 A 342 GLY MET ASP ALA LEU HIS ILE SER GLY SER SER ALA PHE SEQRES 9 A 342 THR PRO ALA GLN LEU LYS ASN VAL ALA ALA LYS LEU ARG SEQRES 10 A 342 GLU LYS THR ALA GLY PRO ILE TYR ASP VAL ASP LEU ARG SEQRES 11 A 342 GLN GLU SER HIS GLY TYR LEU ASP GLY ILE PRO VAL SER SEQRES 12 A 342 TRP TYR GLY GLU ARG ASP TRP ALA ASN LEU GLY LYS SER SEQRES 13 A 342 GLN HIS GLU ALA LEU ALA ASP GLU ARG HIS ARG LEU HIS SEQRES 14 A 342 ALA ALA LEU HIS LYS THR VAL TYR ILE ALA PRO LEU GLY SEQRES 15 A 342 LYS HIS LYS LEU PRO GLU GLY GLY GLU VAL ARG ARG VAL SEQRES 16 A 342 GLN LYS VAL GLN THR GLU GLN GLU VAL ALA GLU ALA ALA SEQRES 17 A 342 GLY MET ARG TYR PHE ARG ILE ALA ALA THR ASP HIS VAL SEQRES 18 A 342 TRP PRO THR PRO GLU ASN ILE ASP ARG PHE LEU ALA PHE SEQRES 19 A 342 TYR ARG THR LEU PRO GLN ASP ALA TRP LEU HIS PHE HIS SEQRES 20 A 342 SER GLU ALA GLY VAL GLY ARG THR THR ALA PHE MET VAL SEQRES 21 A 342 MET THR ASP MET LEU LYS ASN PRO SER VAL SER LEU LYS SEQRES 22 A 342 ASP ILE LEU TYR ARG GLN HIS GLU ILE GLY GLY PHE TYR SEQRES 23 A 342 TYR GLY GLU PHE PRO ILE LYS THR LYS ASP LYS ASP SER SEQRES 24 A 342 TRP LYS THR LYS TYR TYR ARG GLU LYS ILE VAL MET ILE SEQRES 25 A 342 GLU GLN PHE TYR ARG TYR VAL GLN GLU ASN ARG ALA ASP SEQRES 26 A 342 GLY TYR GLN THR PRO TRP SER VAL TRP LEU LYS SER HIS SEQRES 27 A 342 PRO ALA LYS ALA SEQRES 1 B 342 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 342 LEU VAL PRO ARG GLY SER HIS MET ALA SER ALA LYS ALA SEQRES 3 B 342 PRO GLU GLN THR VAL THR GLU PRO VAL GLY SER TYR ALA SEQRES 4 B 342 ARG ALA GLU ARG PRO GLN ASP PHE GLU GLY PHE VAL TRP SEQRES 5 B 342 ARG LEU ASP ASN ASP GLY LYS GLU ALA LEU PRO ARG ASN SEQRES 6 B 342 PHE ARG THR SER ALA ASP ALA LEU ARG ALA PRO GLU LYS SEQRES 7 B 342 LYS PHE HIS LEU ASP ALA ALA TYR VAL PRO SER ARG GLU SEQRES 8 B 342 GLY MET ASP ALA LEU HIS ILE SER GLY SER SER ALA PHE SEQRES 9 B 342 THR PRO ALA GLN LEU LYS ASN VAL ALA ALA LYS LEU ARG SEQRES 10 B 342 GLU LYS THR ALA GLY PRO ILE TYR ASP VAL ASP LEU ARG SEQRES 11 B 342 GLN GLU SER HIS GLY TYR LEU ASP GLY ILE PRO VAL SER SEQRES 12 B 342 TRP TYR GLY GLU ARG ASP TRP ALA ASN LEU GLY LYS SER SEQRES 13 B 342 GLN HIS GLU ALA LEU ALA ASP GLU ARG HIS ARG LEU HIS SEQRES 14 B 342 ALA ALA LEU HIS LYS THR VAL TYR ILE ALA PRO LEU GLY SEQRES 15 B 342 LYS HIS LYS LEU PRO GLU GLY GLY GLU VAL ARG ARG VAL SEQRES 16 B 342 GLN LYS VAL GLN THR GLU GLN GLU VAL ALA GLU ALA ALA SEQRES 17 B 342 GLY MET ARG TYR PHE ARG ILE ALA ALA THR ASP HIS VAL SEQRES 18 B 342 TRP PRO THR PRO GLU ASN ILE ASP ARG PHE LEU ALA PHE SEQRES 19 B 342 TYR ARG THR LEU PRO GLN ASP ALA TRP LEU HIS PHE HIS SEQRES 20 B 342 SER GLU ALA GLY VAL GLY ARG THR THR ALA PHE MET VAL SEQRES 21 B 342 MET THR ASP MET LEU LYS ASN PRO SER VAL SER LEU LYS SEQRES 22 B 342 ASP ILE LEU TYR ARG GLN HIS GLU ILE GLY GLY PHE TYR SEQRES 23 B 342 TYR GLY GLU PHE PRO ILE LYS THR LYS ASP LYS ASP SER SEQRES 24 B 342 TRP LYS THR LYS TYR TYR ARG GLU LYS ILE VAL MET ILE SEQRES 25 B 342 GLU GLN PHE TYR ARG TYR VAL GLN GLU ASN ARG ALA ASP SEQRES 26 B 342 GLY TYR GLN THR PRO TRP SER VAL TRP LEU LYS SER HIS SEQRES 27 B 342 PRO ALA LYS ALA HET 4IP A 401 28 HET GOL A 402 6 HET GOL A 403 6 HET GOL A 404 6 HET CL A 405 1 HET 4IP B 401 28 HET GOL B 402 6 HET GOL B 403 6 HET GOL B 404 6 HETNAM 4IP INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 4IP 2(C6 H16 O18 P4) FORMUL 4 GOL 6(C3 H8 O3) FORMUL 7 CL CL 1- FORMUL 12 HOH *663(H2 O) HELIX 1 AA1 SER A 41 GLU A 46 5 6 HELIX 2 AA2 ARG A 47 PHE A 51 5 5 HELIX 3 AA3 GLU A 81 HIS A 85 5 5 HELIX 4 AA4 GLY A 96 HIS A 101 1 6 HELIX 5 AA5 THR A 109 GLU A 122 1 14 HELIX 6 AA6 ARG A 152 TRP A 154 5 3 HELIX 7 AA7 SER A 160 LEU A 176 1 17 HELIX 8 AA8 GLY A 186 LEU A 190 5 5 HELIX 9 AA9 THR A 204 ALA A 212 1 9 HELIX 10 AB1 THR A 228 LEU A 242 1 15 HELIX 11 AB2 VAL A 256 ASN A 271 1 16 HELIX 12 AB3 SER A 275 ILE A 286 1 12 HELIX 13 AB4 LYS A 299 TRP A 304 5 6 HELIX 14 AB5 LYS A 305 ARG A 327 1 23 HELIX 15 AB6 PRO A 334 HIS A 342 1 9 HELIX 16 AB7 SER B 41 GLU B 46 5 6 HELIX 17 AB8 ARG B 47 PHE B 51 5 5 HELIX 18 AB9 GLU B 81 HIS B 85 5 5 HELIX 19 AC1 GLY B 96 HIS B 101 1 6 HELIX 20 AC2 THR B 109 GLU B 122 1 14 HELIX 21 AC3 ARG B 152 TRP B 154 5 3 HELIX 22 AC4 SER B 160 LEU B 176 1 17 HELIX 23 AC5 GLY B 186 LEU B 190 5 5 HELIX 24 AC6 THR B 204 ALA B 212 1 9 HELIX 25 AC7 THR B 228 LEU B 242 1 15 HELIX 26 AC8 VAL B 256 ASN B 271 1 16 HELIX 27 AC9 SER B 275 ILE B 286 1 12 HELIX 28 AD1 LYS B 299 TRP B 304 5 6 HELIX 29 AD2 LYS B 305 ARG B 327 1 23 HELIX 30 AD3 PRO B 334 HIS B 342 1 9 SHEET 1 AA1 6 GLU A 195 ARG A 198 0 SHEET 2 AA1 6 THR A 179 ALA A 183 -1 N VAL A 180 O ARG A 197 SHEET 3 AA1 6 GLY A 53 LEU A 58 1 N TRP A 56 O ALA A 183 SHEET 4 AA1 6 ILE A 144 GLY A 150 -1 O SER A 147 N ARG A 57 SHEET 5 AA1 6 HIS A 138 LEU A 141 -1 N GLY A 139 O VAL A 146 SHEET 6 AA1 6 VAL A 202 GLN A 203 -1 O GLN A 203 N TYR A 140 SHEET 1 AA2 5 ARG A 71 THR A 72 0 SHEET 2 AA2 5 ILE A 102 SER A 105 -1 O GLY A 104 N ARG A 71 SHEET 3 AA2 5 TRP A 247 HIS A 251 1 O PHE A 250 N SER A 103 SHEET 4 AA2 5 ILE A 128 ARG A 134 1 N TYR A 129 O TRP A 247 SHEET 5 AA2 5 ARG A 215 ALA A 221 1 O ARG A 215 N ASP A 130 SHEET 1 AA3 6 GLU B 195 ARG B 198 0 SHEET 2 AA3 6 THR B 179 ALA B 183 -1 N VAL B 180 O ARG B 197 SHEET 3 AA3 6 GLY B 53 LEU B 58 1 N LEU B 58 O ALA B 183 SHEET 4 AA3 6 ILE B 144 GLY B 150 -1 O SER B 147 N ARG B 57 SHEET 5 AA3 6 HIS B 138 LEU B 141 -1 N GLY B 139 O VAL B 146 SHEET 6 AA3 6 VAL B 202 GLN B 203 -1 O GLN B 203 N TYR B 140 SHEET 1 AA4 5 ARG B 71 THR B 72 0 SHEET 2 AA4 5 ILE B 102 SER B 105 -1 O GLY B 104 N ARG B 71 SHEET 3 AA4 5 TRP B 247 HIS B 251 1 O PHE B 250 N SER B 103 SHEET 4 AA4 5 ILE B 128 ARG B 134 1 N TYR B 129 O TRP B 247 SHEET 5 AA4 5 ARG B 215 ALA B 221 1 O ARG B 215 N ASP B 130 SITE 1 AC1 18 ARG A 57 LYS A 189 ASP A 223 HIS A 224 SITE 2 AC1 18 SER A 252 GLU A 253 ALA A 254 GLY A 255 SITE 3 AC1 18 VAL A 256 GLY A 257 ARG A 258 LYS A 305 SITE 4 AC1 18 TYR A 309 HOH A 510 HOH A 516 HOH A 546 SITE 5 AC1 18 HOH A 562 HOH A 692 SITE 1 AC2 9 GLN A 33 TYR A 239 PRO A 243 GLN A 244 SITE 2 AC2 9 ALA A 246 LYS A 270 HOH A 534 HOH A 566 SITE 3 AC2 9 HOH A 612 SITE 1 AC3 4 ASP A 59 ASN A 60 ASP A 61 ARG A 68 SITE 1 AC4 5 ARG A 169 HIS A 173 VAL A 202 GLU A 207 SITE 2 AC4 5 HOH A 506 SITE 1 AC5 2 GLN A 161 HOH A 807 SITE 1 AC6 20 ARG B 57 LYS B 189 ASP B 223 HIS B 224 SITE 2 AC6 20 SER B 252 GLU B 253 ALA B 254 GLY B 255 SITE 3 AC6 20 VAL B 256 GLY B 257 ARG B 258 LYS B 305 SITE 4 AC6 20 TYR B 309 HOH B 501 HOH B 504 HOH B 531 SITE 5 AC6 20 HOH B 534 HOH B 602 HOH B 623 HOH B 646 SITE 1 AC7 9 GLN B 33 TYR B 239 PRO B 243 GLN B 244 SITE 2 AC7 9 ALA B 246 LYS B 270 HOH B 525 HOH B 533 SITE 3 AC7 9 HOH B 575 SITE 1 AC8 5 ASP B 59 ASN B 60 ASP B 61 ARG B 68 SITE 2 AC8 5 SER B 106 SITE 1 AC9 4 ARG B 169 VAL B 202 GLU B 207 HOH B 545 CRYST1 45.830 138.150 80.580 90.00 102.30 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021820 0.000000 0.004757 0.00000 SCALE2 0.000000 0.007239 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012702 0.00000