data_4WUL # _entry.id 4WUL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4WUL pdb_00004wul 10.2210/pdb4wul/pdb WWPDB D_1000204532 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 4WUH PDB . unspecified 4WU4 PDB . unspecified 4WT0 PDB . unspecified 4WSZ PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4WUL _pdbx_database_status.recvd_initial_deposition_date 2014-11-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Davlieva, M.' 1 'Shamoo, Y.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 43 _citation.language ? _citation.page_first 4758 _citation.page_last 4773 _citation.title ;A variable DNA recognition site organization establishes the LiaR-mediated cell envelope stress response of enterococci to daptomycin. ; _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkv321 _citation.pdbx_database_id_PubMed 25897118 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Davlieva, M.' 1 ? primary 'Shi, Y.' 2 ? primary 'Leonard, P.G.' 3 ? primary 'Johnson, T.A.' 4 ? primary 'Zianni, M.R.' 5 ? primary 'Arias, C.A.' 6 ? primary 'Ladbury, J.E.' 7 ? primary 'Shamoo, Y.' 8 ? # _cell.length_a 113.585 _cell.length_b 113.585 _cell.length_c 48.225 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.length_a_esd 0.0 _cell.length_b_esd 0.0 _cell.length_c_esd 0.0 _cell.angle_alpha_esd 0.0 _cell.angle_beta_esd 0.0 _cell.angle_gamma_esd 0.0 _cell.entry_id 4WUL _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WUL _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Response regulator receiver domain protein' 7710.860 2 ? ? 'DNA binding domain' ? 2 polymer syn 'DNA (26-MER)' 8003.219 1 ? ? ? ? 3 polymer syn 'DNA (26-MER)' 7967.162 1 ? ? ? ? 4 water nat water 18.015 98 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no MVLHEDLTNREHEILMLIAQGKSNQEIADELFITLKTVKTHVSNILAKLDVDNRTQAAIYAFQHGLAK MVLHEDLTNREHEILMLIAQGKSNQEIADELFITLKTVKTHVSNILAKLDVDNRTQAAIYAFQHGLAK A,B ? 2 polydeoxyribonucleotide no no ;(DA)(DC)(DT)(DA)(DG)(DT)(DC)(DC)(DT)(DT)(DA)(DC)(DT)(DA)(DA)(DT)(DG)(DA)(DG)(DA) (DA)(DG)(DA)(DA)(DA)(DT) ; ACTAGTCCTTACTAATGAGAAGAAAT H ? 3 polydeoxyribonucleotide no no ;(DA)(DT)(DT)(DT)(DC)(DT)(DT)(DC)(DT)(DC)(DA)(DT)(DT)(DA)(DG)(DT)(DA)(DA)(DG)(DG) (DA)(DC)(DT)(DA)(DG)(DT) ; ATTTCTTCTCATTAGTAAGGACTAGT C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 LEU n 1 4 HIS n 1 5 GLU n 1 6 ASP n 1 7 LEU n 1 8 THR n 1 9 ASN n 1 10 ARG n 1 11 GLU n 1 12 HIS n 1 13 GLU n 1 14 ILE n 1 15 LEU n 1 16 MET n 1 17 LEU n 1 18 ILE n 1 19 ALA n 1 20 GLN n 1 21 GLY n 1 22 LYS n 1 23 SER n 1 24 ASN n 1 25 GLN n 1 26 GLU n 1 27 ILE n 1 28 ALA n 1 29 ASP n 1 30 GLU n 1 31 LEU n 1 32 PHE n 1 33 ILE n 1 34 THR n 1 35 LEU n 1 36 LYS n 1 37 THR n 1 38 VAL n 1 39 LYS n 1 40 THR n 1 41 HIS n 1 42 VAL n 1 43 SER n 1 44 ASN n 1 45 ILE n 1 46 LEU n 1 47 ALA n 1 48 LYS n 1 49 LEU n 1 50 ASP n 1 51 VAL n 1 52 ASP n 1 53 ASN n 1 54 ARG n 1 55 THR n 1 56 GLN n 1 57 ALA n 1 58 ALA n 1 59 ILE n 1 60 TYR n 1 61 ALA n 1 62 PHE n 1 63 GLN n 1 64 HIS n 1 65 GLY n 1 66 LEU n 1 67 ALA n 1 68 LYS n 2 1 DA n 2 2 DC n 2 3 DT n 2 4 DA n 2 5 DG n 2 6 DT n 2 7 DC n 2 8 DC n 2 9 DT n 2 10 DT n 2 11 DA n 2 12 DC n 2 13 DT n 2 14 DA n 2 15 DA n 2 16 DT n 2 17 DG n 2 18 DA n 2 19 DG n 2 20 DA n 2 21 DA n 2 22 DG n 2 23 DA n 2 24 DA n 2 25 DA n 2 26 DT n 3 1 DA n 3 2 DT n 3 3 DT n 3 4 DT n 3 5 DC n 3 6 DT n 3 7 DT n 3 8 DC n 3 9 DT n 3 10 DC n 3 11 DA n 3 12 DT n 3 13 DT n 3 14 DA n 3 15 DG n 3 16 DT n 3 17 DA n 3 18 DA n 3 19 DG n 3 20 DG n 3 21 DA n 3 22 DC n 3 23 DT n 3 24 DA n 3 25 DG n 3 26 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 68 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name ? _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pETDuet _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 26 'Enterococcus faecalis S613' ? 699185 ? 3 1 sample 1 26 'Enterococcus faecalis S613' ? 699185 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP R3G073_ENTFL R3G073 ? 1 VLHEDLTNREHEILMLIAQGKSNQEIADELFITLKTVKTHVSNILAKLDVDDRTQAAIYAFQHGLAK 144 2 PDB 4WUL 4WUL ? 2 ? 1 3 PDB 4WUL 4WUL ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4WUL A 2 ? 68 ? R3G073 144 ? 210 ? 140 206 2 1 4WUL B 2 ? 68 ? R3G073 144 ? 210 ? 140 206 3 2 4WUL H 1 ? 26 ? 4WUL -124 ? -99 ? -124 -99 4 3 4WUL C 1 ? 26 ? 4WUL -99 ? -124 ? -99 -124 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4WUL MET A 1 ? UNP R3G073 ? ? 'initiating methionine' 139 1 1 4WUL ASN A 53 ? UNP R3G073 ASP 195 conflict 191 2 2 4WUL MET B 1 ? UNP R3G073 ? ? 'initiating methionine' 139 3 2 4WUL ASN B 53 ? UNP R3G073 ASP 195 conflict 191 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4WUL _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.93 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 57.99 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 283 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.08 M KCl, 0.02 M BaCl2, 0.04 M Sodium cacodylate (pH 6.0), 43% MPD, 0.012 M Spermine tetrachloride, 0.01 M Proline, 0.01 M Strontium chloride ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details 'Bimorph K-B pair' _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-12-01 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator Kohzu _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97872 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-D' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97872 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-D _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4WUL _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.4 _reflns.d_resolution_low 30.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs ? _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.percent_possible_obs 100.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 22.5 _reflns.pdbx_Rmerge_I_obs 0.101 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.101 _reflns.pdbx_netI_over_av_sigmaI 33.670 _reflns.pdbx_netI_over_sigmaI 33 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.4 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 9.333 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.733 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 22.3 _reflns_shell.pdbx_Rsym_value 0.733 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 162.900 _refine.B_iso_mean 46.9647 _refine.B_iso_min 10.700 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4WUL _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.4 _refine.ls_d_res_low 29.4450 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 13364 _refine.ls_number_reflns_R_free 1334 _refine.ls_number_reflns_R_work 12030 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.7200 _refine.ls_percent_reflns_R_free 9.9800 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2240 _refine.ls_R_factor_R_free 0.2755 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2185 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4WTO _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.1300 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3400 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.4 _refine_hist.d_res_low 29.4450 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 98 _refine_hist.number_atoms_total 2188 _refine_hist.pdbx_number_residues_total 181 _refine_hist.pdbx_B_iso_mean_solvent 38.51 _refine_hist.pdbx_number_atoms_protein 1024 _refine_hist.pdbx_number_atoms_nucleic_acid 1066 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 2229 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.686 ? 3233 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.026 ? 378 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.002 ? 231 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 25.205 ? 890 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error 'X-RAY DIFFRACTION' 2.4417 2.5289 1308 . 135 1173 98.0000 . . . 0.3240 . 0.2600 . . . . . . 10 . 'X-RAY DIFFRACTION' 2.5289 2.6301 1311 . 131 1180 100.0000 . . . 0.2789 . 0.2535 . . . . . . 10 . 'X-RAY DIFFRACTION' 2.6301 2.7497 1317 . 130 1187 100.0000 . . . 0.3256 . 0.2481 . . . . . . 10 . 'X-RAY DIFFRACTION' 2.7497 2.8946 1336 . 133 1203 100.0000 . . . 0.3045 . 0.2809 . . . . . . 10 . 'X-RAY DIFFRACTION' 2.8946 3.0758 1339 . 133 1206 100.0000 . . . 0.3531 . 0.2742 . . . . . . 10 . 'X-RAY DIFFRACTION' 3.0758 3.3130 1324 . 128 1196 100.0000 . . . 0.3323 . 0.2121 . . . . . . 10 . 'X-RAY DIFFRACTION' 3.3130 3.6458 1340 . 134 1206 100.0000 . . . 0.2654 . 0.2038 . . . . . . 10 . 'X-RAY DIFFRACTION' 3.6458 4.1721 1336 . 131 1205 100.0000 . . . 0.2914 . 0.1880 . . . . . . 10 . 'X-RAY DIFFRACTION' 4.1721 5.2515 1356 . 134 1222 100.0000 . . . 0.2149 . 0.1959 . . . . . . 10 . 'X-RAY DIFFRACTION' 5.2515 29.4468 1397 . 145 1252 100.0000 . . . 0.2286 . 0.2081 . . . . . . 10 . # _struct.entry_id 4WUL _struct.title 'Crystal structure of E. faecalis DNA binding domain LiaRD191N complexed with 26bp DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4WUL _struct_keywords.text 'helix-turn-helix, response regulator, enterococci, DNA binding domain, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 8 ? ALA A 19 ? THR A 146 ALA A 157 1 ? 12 HELX_P HELX_P2 AA2 SER A 23 ? PHE A 32 ? SER A 161 PHE A 170 1 ? 10 HELX_P HELX_P3 AA3 THR A 34 ? ASP A 50 ? THR A 172 ASP A 188 1 ? 17 HELX_P HELX_P4 AA4 ASN A 53 ? HIS A 64 ? ASN A 191 HIS A 202 1 ? 12 HELX_P HELX_P5 AA5 THR B 8 ? ALA B 19 ? THR B 146 ALA B 157 1 ? 12 HELX_P HELX_P6 AA6 SER B 23 ? PHE B 32 ? SER B 161 PHE B 170 1 ? 10 HELX_P HELX_P7 AA7 THR B 34 ? ASP B 50 ? THR B 172 ASP B 188 1 ? 17 HELX_P HELX_P8 AA8 ASN B 53 ? HIS B 64 ? ASN B 191 HIS B 202 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 25 N1 ? ? H DC -123 C DG -123 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 25 O6 ? ? H DC -123 C DG -123 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 25 N2 ? ? H DC -123 C DG -123 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 24 N1 ? ? H DT -122 C DA -122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 24 N6 ? ? H DT -122 C DA -122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 23 N3 ? ? H DA -121 C DT -121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 23 O4 ? ? H DA -121 C DT -121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 22 N3 ? ? H DG -120 C DC -120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 22 O2 ? ? H DG -120 C DC -120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 22 N4 ? ? H DG -120 C DC -120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 21 N1 ? ? H DT -119 C DA -119 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog12 hydrog ? ? C DC 7 N3 ? ? ? 1_555 D DG 20 N1 ? ? H DC -118 C DG -118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DC 7 N4 ? ? ? 1_555 D DG 20 O6 ? ? H DC -118 C DG -118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DC 7 O2 ? ? ? 1_555 D DG 20 N2 ? ? H DC -118 C DG -118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 19 N1 ? ? H DC -117 C DG -117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 19 O6 ? ? H DC -117 C DG -117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 19 N2 ? ? H DC -117 C DG -117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 9 N3 ? ? ? 1_555 D DA 18 N1 ? ? H DT -116 C DA -116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DT 9 O4 ? ? ? 1_555 D DA 18 N6 ? ? H DT -116 C DA -116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DT 10 N3 ? ? ? 1_555 D DA 17 N1 ? ? H DT -115 C DA -115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DT 10 O4 ? ? ? 1_555 D DA 17 N6 ? ? H DT -115 C DA -115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DA 11 N1 ? ? ? 1_555 D DT 16 N3 ? ? H DA -114 C DT -114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DA 11 N6 ? ? ? 1_555 D DT 16 O4 ? ? H DA -114 C DT -114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DC 12 N3 ? ? ? 1_555 D DG 15 N1 ? ? H DC -113 C DG -113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DC 12 N4 ? ? ? 1_555 D DG 15 O6 ? ? H DC -113 C DG -113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 12 O2 ? ? ? 1_555 D DG 15 N2 ? ? H DC -113 C DG -113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DT 13 N3 ? ? ? 1_555 D DA 14 N1 ? ? H DT -112 C DA -112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DT 13 O4 ? ? ? 1_555 D DA 14 N6 ? ? H DT -112 C DA -112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DA 14 N1 ? ? ? 1_555 D DT 13 N3 ? ? H DA -111 C DT -111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DA 14 N6 ? ? ? 1_555 D DT 13 O4 ? ? H DA -111 C DT -111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DA 15 N1 ? ? ? 1_555 D DT 12 N3 ? ? H DA -110 C DT -110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DA 15 N6 ? ? ? 1_555 D DT 12 O4 ? ? H DA -110 C DT -110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DT 16 N3 ? ? ? 1_555 D DA 11 N1 ? ? H DT -109 C DA -109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DT 16 O4 ? ? ? 1_555 D DA 11 N6 ? ? H DT -109 C DA -109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 17 N1 ? ? ? 1_555 D DC 10 N3 ? ? H DG -108 C DC -108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 17 N2 ? ? ? 1_555 D DC 10 O2 ? ? H DG -108 C DC -108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DG 17 O6 ? ? ? 1_555 D DC 10 N4 ? ? H DG -108 C DC -108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DA 18 N1 ? ? ? 1_555 D DT 9 N3 ? ? H DA -107 C DT -107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DA 18 N6 ? ? ? 1_555 D DT 9 O4 ? ? H DA -107 C DT -107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DG 19 N1 ? ? ? 1_555 D DC 8 N3 ? ? H DG -106 C DC -106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DG 19 N2 ? ? ? 1_555 D DC 8 O2 ? ? H DG -106 C DC -106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DG 19 O6 ? ? ? 1_555 D DC 8 N4 ? ? H DG -106 C DC -106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DA 20 N1 ? ? ? 1_555 D DT 7 N3 ? ? H DA -105 C DT -105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DA 20 N6 ? ? ? 1_555 D DT 7 O4 ? ? H DA -105 C DT -105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DA 21 N1 ? ? ? 1_555 D DT 6 N3 ? ? H DA -104 C DT -104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DA 21 N6 ? ? ? 1_555 D DT 6 O4 ? ? H DA -104 C DT -104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DG 22 N1 ? ? ? 1_555 D DC 5 N3 ? ? H DG -103 C DC -103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DG 22 N2 ? ? ? 1_555 D DC 5 O2 ? ? H DG -103 C DC -103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DG 22 O6 ? ? ? 1_555 D DC 5 N4 ? ? H DG -103 C DC -103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C DA 23 N1 ? ? ? 1_555 D DT 4 N3 ? ? H DA -102 C DT -102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C DA 23 N6 ? ? ? 1_555 D DT 4 O4 ? ? H DA -102 C DT -102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C DA 24 N1 ? ? ? 1_555 D DT 3 N3 ? ? H DA -101 C DT -101 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog53 hydrog ? ? C DA 24 N6 ? ? ? 1_555 D DT 2 O4 ? ? H DA -101 C DT -100 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog54 hydrog ? ? C DT 26 O4 ? ? ? 1_555 D DA 1 N6 ? ? H DT -99 C DA -99 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id HIS _struct_mon_prot_cis.label_seq_id 4 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id HIS _struct_mon_prot_cis.auth_seq_id 142 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 GLU _struct_mon_prot_cis.pdbx_label_seq_id_2 5 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLU _struct_mon_prot_cis.pdbx_auth_seq_id_2 143 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.91 # _atom_sites.entry_id 4WUL _atom_sites.fract_transf_matrix[1][1] 0.008804 _atom_sites.fract_transf_matrix[1][2] 0.005083 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010166 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020736 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_ _database_PDB_caveat.text ;Residue H DA -101 and Residue H DA -100 are not properly linked: distance between O3' and P is 8.98 A ; # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 139 ? ? ? A . n A 1 2 VAL 2 140 ? ? ? A . n A 1 3 LEU 3 141 141 LEU LEU A . n A 1 4 HIS 4 142 142 HIS HIS A . n A 1 5 GLU 5 143 143 GLU GLU A . n A 1 6 ASP 6 144 144 ASP ASP A . n A 1 7 LEU 7 145 145 LEU LEU A . n A 1 8 THR 8 146 146 THR THR A . n A 1 9 ASN 9 147 147 ASN ASN A . n A 1 10 ARG 10 148 148 ARG ARG A . n A 1 11 GLU 11 149 149 GLU GLU A . n A 1 12 HIS 12 150 150 HIS HIS A . n A 1 13 GLU 13 151 151 GLU GLU A . n A 1 14 ILE 14 152 152 ILE ILE A . n A 1 15 LEU 15 153 153 LEU LEU A . n A 1 16 MET 16 154 154 MET MET A . n A 1 17 LEU 17 155 155 LEU LEU A . n A 1 18 ILE 18 156 156 ILE ILE A . n A 1 19 ALA 19 157 157 ALA ALA A . n A 1 20 GLN 20 158 158 GLN GLN A . n A 1 21 GLY 21 159 159 GLY GLY A . n A 1 22 LYS 22 160 160 LYS LYS A . n A 1 23 SER 23 161 161 SER SER A . n A 1 24 ASN 24 162 162 ASN ASN A . n A 1 25 GLN 25 163 163 GLN GLN A . n A 1 26 GLU 26 164 164 GLU GLU A . n A 1 27 ILE 27 165 165 ILE ILE A . n A 1 28 ALA 28 166 166 ALA ALA A . n A 1 29 ASP 29 167 167 ASP ASP A . n A 1 30 GLU 30 168 168 GLU GLU A . n A 1 31 LEU 31 169 169 LEU LEU A . n A 1 32 PHE 32 170 170 PHE PHE A . n A 1 33 ILE 33 171 171 ILE ILE A . n A 1 34 THR 34 172 172 THR THR A . n A 1 35 LEU 35 173 173 LEU LEU A . n A 1 36 LYS 36 174 174 LYS LYS A . n A 1 37 THR 37 175 175 THR THR A . n A 1 38 VAL 38 176 176 VAL VAL A . n A 1 39 LYS 39 177 177 LYS LYS A . n A 1 40 THR 40 178 178 THR THR A . n A 1 41 HIS 41 179 179 HIS HIS A . n A 1 42 VAL 42 180 180 VAL VAL A . n A 1 43 SER 43 181 181 SER SER A . n A 1 44 ASN 44 182 182 ASN ASN A . n A 1 45 ILE 45 183 183 ILE ILE A . n A 1 46 LEU 46 184 184 LEU LEU A . n A 1 47 ALA 47 185 185 ALA ALA A . n A 1 48 LYS 48 186 186 LYS LYS A . n A 1 49 LEU 49 187 187 LEU LEU A . n A 1 50 ASP 50 188 188 ASP ASP A . n A 1 51 VAL 51 189 189 VAL VAL A . n A 1 52 ASP 52 190 190 ASP ASP A . n A 1 53 ASN 53 191 191 ASN ASN A . n A 1 54 ARG 54 192 192 ARG ARG A . n A 1 55 THR 55 193 193 THR THR A . n A 1 56 GLN 56 194 194 GLN GLN A . n A 1 57 ALA 57 195 195 ALA ALA A . n A 1 58 ALA 58 196 196 ALA ALA A . n A 1 59 ILE 59 197 197 ILE ILE A . n A 1 60 TYR 60 198 198 TYR TYR A . n A 1 61 ALA 61 199 199 ALA ALA A . n A 1 62 PHE 62 200 200 PHE PHE A . n A 1 63 GLN 63 201 201 GLN GLN A . n A 1 64 HIS 64 202 202 HIS HIS A . n A 1 65 GLY 65 203 203 GLY GLY A . n A 1 66 LEU 66 204 204 LEU LEU A . n A 1 67 ALA 67 205 205 ALA ALA A . n A 1 68 LYS 68 206 ? ? ? A . n B 1 1 MET 1 139 ? ? ? B . n B 1 2 VAL 2 140 ? ? ? B . n B 1 3 LEU 3 141 ? ? ? B . n B 1 4 HIS 4 142 142 HIS HIS B . n B 1 5 GLU 5 143 143 GLU GLU B . n B 1 6 ASP 6 144 144 ASP ASP B . n B 1 7 LEU 7 145 145 LEU LEU B . n B 1 8 THR 8 146 146 THR THR B . n B 1 9 ASN 9 147 147 ASN ASN B . n B 1 10 ARG 10 148 148 ARG ARG B . n B 1 11 GLU 11 149 149 GLU GLU B . n B 1 12 HIS 12 150 150 HIS HIS B . n B 1 13 GLU 13 151 151 GLU GLU B . n B 1 14 ILE 14 152 152 ILE ILE B . n B 1 15 LEU 15 153 153 LEU LEU B . n B 1 16 MET 16 154 154 MET MET B . n B 1 17 LEU 17 155 155 LEU LEU B . n B 1 18 ILE 18 156 156 ILE ILE B . n B 1 19 ALA 19 157 157 ALA ALA B . n B 1 20 GLN 20 158 158 GLN GLN B . n B 1 21 GLY 21 159 159 GLY GLY B . n B 1 22 LYS 22 160 160 LYS LYS B . n B 1 23 SER 23 161 161 SER SER B . n B 1 24 ASN 24 162 162 ASN ASN B . n B 1 25 GLN 25 163 163 GLN GLN B . n B 1 26 GLU 26 164 164 GLU GLU B . n B 1 27 ILE 27 165 165 ILE ILE B . n B 1 28 ALA 28 166 166 ALA ALA B . n B 1 29 ASP 29 167 167 ASP ASP B . n B 1 30 GLU 30 168 168 GLU GLU B . n B 1 31 LEU 31 169 169 LEU LEU B . n B 1 32 PHE 32 170 170 PHE PHE B . n B 1 33 ILE 33 171 171 ILE ILE B . n B 1 34 THR 34 172 172 THR THR B . n B 1 35 LEU 35 173 173 LEU LEU B . n B 1 36 LYS 36 174 174 LYS LYS B . n B 1 37 THR 37 175 175 THR THR B . n B 1 38 VAL 38 176 176 VAL VAL B . n B 1 39 LYS 39 177 177 LYS LYS B . n B 1 40 THR 40 178 178 THR THR B . n B 1 41 HIS 41 179 179 HIS HIS B . n B 1 42 VAL 42 180 180 VAL VAL B . n B 1 43 SER 43 181 181 SER SER B . n B 1 44 ASN 44 182 182 ASN ASN B . n B 1 45 ILE 45 183 183 ILE ILE B . n B 1 46 LEU 46 184 184 LEU LEU B . n B 1 47 ALA 47 185 185 ALA ALA B . n B 1 48 LYS 48 186 186 LYS LYS B . n B 1 49 LEU 49 187 187 LEU LEU B . n B 1 50 ASP 50 188 188 ASP ASP B . n B 1 51 VAL 51 189 189 VAL VAL B . n B 1 52 ASP 52 190 190 ASP ASP B . n B 1 53 ASN 53 191 191 ASN ASN B . n B 1 54 ARG 54 192 192 ARG ARG B . n B 1 55 THR 55 193 193 THR THR B . n B 1 56 GLN 56 194 194 GLN GLN B . n B 1 57 ALA 57 195 195 ALA ALA B . n B 1 58 ALA 58 196 196 ALA ALA B . n B 1 59 ILE 59 197 197 ILE ILE B . n B 1 60 TYR 60 198 198 TYR TYR B . n B 1 61 ALA 61 199 199 ALA ALA B . n B 1 62 PHE 62 200 200 PHE PHE B . n B 1 63 GLN 63 201 201 GLN GLN B . n B 1 64 HIS 64 202 202 HIS HIS B . n B 1 65 GLY 65 203 203 GLY GLY B . n B 1 66 LEU 66 204 204 LEU LEU B . n B 1 67 ALA 67 205 205 ALA ALA B . n B 1 68 LYS 68 206 ? ? ? B . n C 2 1 DA 1 -124 -124 DA DA H . n C 2 2 DC 2 -123 -123 DC DC H . n C 2 3 DT 3 -122 -122 DT DT H . n C 2 4 DA 4 -121 -121 DA DA H . n C 2 5 DG 5 -120 -120 DG DG H . n C 2 6 DT 6 -119 -119 DT DT H . n C 2 7 DC 7 -118 -118 DC DC H . n C 2 8 DC 8 -117 -117 DC DC H . n C 2 9 DT 9 -116 -116 DT DT H . n C 2 10 DT 10 -115 -115 DT DT H . n C 2 11 DA 11 -114 -114 DA DA H . n C 2 12 DC 12 -113 -113 DC DC H . n C 2 13 DT 13 -112 -112 DT DT H . n C 2 14 DA 14 -111 -111 DA DA H . n C 2 15 DA 15 -110 -110 DA DA H . n C 2 16 DT 16 -109 -109 DT DT H . n C 2 17 DG 17 -108 -108 DG DG H . n C 2 18 DA 18 -107 -107 DA DA H . n C 2 19 DG 19 -106 -106 DG DG H . n C 2 20 DA 20 -105 -105 DA DA H . n C 2 21 DA 21 -104 -104 DA DA H . n C 2 22 DG 22 -103 -103 DG DG H . n C 2 23 DA 23 -102 -102 DA DA H . n C 2 24 DA 24 -101 -101 DA DA H . n C 2 25 DA 25 -100 -100 DA DA H . n C 2 26 DT 26 -99 -99 DT DT H . n D 3 1 DA 1 -99 -99 DA DA C . n D 3 2 DT 2 -100 -100 DT DT C . n D 3 3 DT 3 -101 -101 DT DT C . n D 3 4 DT 4 -102 -102 DT DT C . n D 3 5 DC 5 -103 -103 DC DC C . n D 3 6 DT 6 -104 -104 DT DT C . n D 3 7 DT 7 -105 -105 DT DT C . n D 3 8 DC 8 -106 -106 DC DC C . n D 3 9 DT 9 -107 -107 DT DT C . n D 3 10 DC 10 -108 -108 DC DC C . n D 3 11 DA 11 -109 -109 DA DA C . n D 3 12 DT 12 -110 -110 DT DT C . n D 3 13 DT 13 -111 -111 DT DT C . n D 3 14 DA 14 -112 -112 DA DA C . n D 3 15 DG 15 -113 -113 DG DG C . n D 3 16 DT 16 -114 -114 DT DT C . n D 3 17 DA 17 -115 -115 DA DA C . n D 3 18 DA 18 -116 -116 DA DA C . n D 3 19 DG 19 -117 -117 DG DG C . n D 3 20 DG 20 -118 -118 DG DG C . n D 3 21 DA 21 -119 -119 DA DA C . n D 3 22 DC 22 -120 -120 DC DC C . n D 3 23 DT 23 -121 -121 DT DT C . n D 3 24 DA 24 -122 -122 DA DA C . n D 3 25 DG 25 -123 -123 DG DG C . n D 3 26 DT 26 -124 -124 DT DT C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 301 98 HOH HOH A . E 4 HOH 2 302 14 HOH HOH A . E 4 HOH 3 303 16 HOH HOH A . E 4 HOH 4 304 19 HOH HOH A . E 4 HOH 5 305 42 HOH HOH A . E 4 HOH 6 306 46 HOH HOH A . E 4 HOH 7 307 58 HOH HOH A . E 4 HOH 8 308 66 HOH HOH A . E 4 HOH 9 309 72 HOH HOH A . E 4 HOH 10 310 83 HOH HOH A . E 4 HOH 11 311 84 HOH HOH A . E 4 HOH 12 312 85 HOH HOH A . E 4 HOH 13 313 86 HOH HOH A . E 4 HOH 14 314 93 HOH HOH A . E 4 HOH 15 315 94 HOH HOH A . F 4 HOH 1 301 59 HOH HOH B . F 4 HOH 2 302 5 HOH HOH B . F 4 HOH 3 303 13 HOH HOH B . F 4 HOH 4 304 17 HOH HOH B . F 4 HOH 5 305 20 HOH HOH B . F 4 HOH 6 306 29 HOH HOH B . F 4 HOH 7 307 30 HOH HOH B . F 4 HOH 8 308 44 HOH HOH B . F 4 HOH 9 309 64 HOH HOH B . F 4 HOH 10 310 71 HOH HOH B . F 4 HOH 11 311 78 HOH HOH B . F 4 HOH 12 312 79 HOH HOH B . F 4 HOH 13 313 80 HOH HOH B . F 4 HOH 14 314 92 HOH HOH B . G 4 HOH 1 101 56 HOH HOH H . G 4 HOH 2 102 49 HOH HOH H . G 4 HOH 3 103 11 HOH HOH H . G 4 HOH 4 104 47 HOH HOH H . G 4 HOH 5 105 63 HOH HOH H . G 4 HOH 6 106 53 HOH HOH H . G 4 HOH 7 107 1 HOH HOH H . G 4 HOH 8 108 3 HOH HOH H . G 4 HOH 9 109 7 HOH HOH H . G 4 HOH 10 110 8 HOH HOH H . G 4 HOH 11 111 9 HOH HOH H . G 4 HOH 12 112 18 HOH HOH H . G 4 HOH 13 113 23 HOH HOH H . G 4 HOH 14 114 24 HOH HOH H . G 4 HOH 15 115 26 HOH HOH H . G 4 HOH 16 116 27 HOH HOH H . G 4 HOH 17 117 28 HOH HOH H . G 4 HOH 18 118 32 HOH HOH H . G 4 HOH 19 119 34 HOH HOH H . G 4 HOH 20 120 35 HOH HOH H . G 4 HOH 21 121 37 HOH HOH H . G 4 HOH 22 122 39 HOH HOH H . G 4 HOH 23 123 55 HOH HOH H . G 4 HOH 24 124 60 HOH HOH H . G 4 HOH 25 125 65 HOH HOH H . G 4 HOH 26 126 69 HOH HOH H . G 4 HOH 27 127 73 HOH HOH H . G 4 HOH 28 128 87 HOH HOH H . G 4 HOH 29 129 89 HOH HOH H . G 4 HOH 30 130 91 HOH HOH H . G 4 HOH 31 131 95 HOH HOH H . G 4 HOH 32 132 96 HOH HOH H . G 4 HOH 33 133 97 HOH HOH H . H 4 HOH 1 101 90 HOH HOH C . H 4 HOH 2 102 74 HOH HOH C . H 4 HOH 3 103 75 HOH HOH C . H 4 HOH 4 104 2 HOH HOH C . H 4 HOH 5 105 4 HOH HOH C . H 4 HOH 6 106 6 HOH HOH C . H 4 HOH 7 107 10 HOH HOH C . H 4 HOH 8 108 12 HOH HOH C . H 4 HOH 9 109 15 HOH HOH C . H 4 HOH 10 110 21 HOH HOH C . H 4 HOH 11 111 22 HOH HOH C . H 4 HOH 12 112 25 HOH HOH C . H 4 HOH 13 113 31 HOH HOH C . H 4 HOH 14 114 33 HOH HOH C . H 4 HOH 15 115 36 HOH HOH C . H 4 HOH 16 116 38 HOH HOH C . H 4 HOH 17 117 40 HOH HOH C . H 4 HOH 18 118 41 HOH HOH C . H 4 HOH 19 119 43 HOH HOH C . H 4 HOH 20 120 45 HOH HOH C . H 4 HOH 21 121 48 HOH HOH C . H 4 HOH 22 122 50 HOH HOH C . H 4 HOH 23 123 51 HOH HOH C . H 4 HOH 24 124 52 HOH HOH C . H 4 HOH 25 125 54 HOH HOH C . H 4 HOH 26 126 57 HOH HOH C . H 4 HOH 27 127 61 HOH HOH C . H 4 HOH 28 128 62 HOH HOH C . H 4 HOH 29 129 67 HOH HOH C . H 4 HOH 30 130 68 HOH HOH C . H 4 HOH 31 131 70 HOH HOH C . H 4 HOH 32 132 76 HOH HOH C . H 4 HOH 33 133 77 HOH HOH C . H 4 HOH 34 134 81 HOH HOH C . H 4 HOH 35 135 82 HOH HOH C . H 4 HOH 36 136 88 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-05-06 2 'Structure model' 1 1 2015-06-03 3 'Structure model' 1 2 2015-08-26 4 'Structure model' 1 3 2017-09-20 5 'Structure model' 1 4 2019-12-11 6 'Structure model' 1 5 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Experimental preparation' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Author supporting evidence' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_audit_support 2 4 'Structure model' pdbx_struct_oper_list 3 4 'Structure model' software 4 5 'Structure model' pdbx_audit_support 5 6 'Structure model' chem_comp_atom 6 6 'Structure model' chem_comp_bond 7 6 'Structure model' database_2 8 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_audit_support.funding_organization' 2 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 3 5 'Structure model' '_pdbx_audit_support.funding_organization' 4 6 'Structure model' '_database_2.pdbx_DOI' 5 6 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 3.3254 _pdbx_refine_tls.origin_y 42.4077 _pdbx_refine_tls.origin_z -9.1498 _pdbx_refine_tls.T[1][1] 0.1416 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] 0.0183 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] 0.2302 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.2190 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.0329 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.2422 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 0.0366 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -0.0069 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] 0.0216 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 0.0445 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] -0.0204 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 0.0717 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] 0.1086 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.0188 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.0214 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] 0.0013 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.0990 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.0034 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.0215 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] 0.0085 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.1602 _pdbx_refine_tls.S[3][3]_esd ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 141 ? ? A 205 ? all 2 'X-RAY DIFFRACTION' 1 ? ? B 142 ? ? B 205 ? all 3 'X-RAY DIFFRACTION' 1 ? ? H -124 ? ? H -99 ? all 4 'X-RAY DIFFRACTION' 1 ? ? C -99 ? ? C -124 ? all 5 'X-RAY DIFFRACTION' 1 ? ? S 1 ? ? S 98 ? all # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 306 ? ? O B HOH 307 ? ? 1.90 2 1 O H HOH 114 ? ? O H HOH 125 ? ? 2.02 3 1 O A HOH 307 ? ? O H HOH 106 ? ? 2.06 4 1 O A HOH 308 ? ? O A HOH 309 ? ? 2.08 5 1 OP2 H DG -103 ? ? O H HOH 133 ? ? 2.11 6 1 N7 H DA -102 ? ? O H HOH 128 ? ? 2.12 7 1 OP2 C DT -124 ? ? O C HOH 101 ? ? 2.13 8 1 O H HOH 118 ? ? O H HOH 120 ? ? 2.14 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" H DT -116 ? ? "C1'" H DT -116 ? ? N1 H DT -116 ? ? 110.22 108.30 1.92 0.30 N 2 1 "O4'" C DT -124 ? ? "C1'" C DT -124 ? ? N1 C DT -124 ? ? 110.12 108.30 1.82 0.30 N # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 "O3'" _pdbx_validate_polymer_linkage.auth_asym_id_1 H _pdbx_validate_polymer_linkage.auth_comp_id_1 DA _pdbx_validate_polymer_linkage.auth_seq_id_1 -101 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 P _pdbx_validate_polymer_linkage.auth_asym_id_2 H _pdbx_validate_polymer_linkage.auth_comp_id_2 DA _pdbx_validate_polymer_linkage.auth_seq_id_2 -100 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 8.98 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 139 ? A MET 1 2 1 Y 1 A VAL 140 ? A VAL 2 3 1 Y 1 A LYS 206 ? A LYS 68 4 1 Y 1 B MET 139 ? B MET 1 5 1 Y 1 B VAL 140 ? B VAL 2 6 1 Y 1 B LEU 141 ? B LEU 3 7 1 Y 1 B LYS 206 ? B LYS 68 # _cell_measurement.reflns_used 280748 _cell_measurement.entry_id 4WUL # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 HOH O O N N 287 HOH H1 H N N 288 HOH H2 H N N 289 ILE N N N N 290 ILE CA C N S 291 ILE C C N N 292 ILE O O N N 293 ILE CB C N S 294 ILE CG1 C N N 295 ILE CG2 C N N 296 ILE CD1 C N N 297 ILE OXT O N N 298 ILE H H N N 299 ILE H2 H N N 300 ILE HA H N N 301 ILE HB H N N 302 ILE HG12 H N N 303 ILE HG13 H N N 304 ILE HG21 H N N 305 ILE HG22 H N N 306 ILE HG23 H N N 307 ILE HD11 H N N 308 ILE HD12 H N N 309 ILE HD13 H N N 310 ILE HXT H N N 311 LEU N N N N 312 LEU CA C N S 313 LEU C C N N 314 LEU O O N N 315 LEU CB C N N 316 LEU CG C N N 317 LEU CD1 C N N 318 LEU CD2 C N N 319 LEU OXT O N N 320 LEU H H N N 321 LEU H2 H N N 322 LEU HA H N N 323 LEU HB2 H N N 324 LEU HB3 H N N 325 LEU HG H N N 326 LEU HD11 H N N 327 LEU HD12 H N N 328 LEU HD13 H N N 329 LEU HD21 H N N 330 LEU HD22 H N N 331 LEU HD23 H N N 332 LEU HXT H N N 333 LYS N N N N 334 LYS CA C N S 335 LYS C C N N 336 LYS O O N N 337 LYS CB C N N 338 LYS CG C N N 339 LYS CD C N N 340 LYS CE C N N 341 LYS NZ N N N 342 LYS OXT O N N 343 LYS H H N N 344 LYS H2 H N N 345 LYS HA H N N 346 LYS HB2 H N N 347 LYS HB3 H N N 348 LYS HG2 H N N 349 LYS HG3 H N N 350 LYS HD2 H N N 351 LYS HD3 H N N 352 LYS HE2 H N N 353 LYS HE3 H N N 354 LYS HZ1 H N N 355 LYS HZ2 H N N 356 LYS HZ3 H N N 357 LYS HXT H N N 358 MET N N N N 359 MET CA C N S 360 MET C C N N 361 MET O O N N 362 MET CB C N N 363 MET CG C N N 364 MET SD S N N 365 MET CE C N N 366 MET OXT O N N 367 MET H H N N 368 MET H2 H N N 369 MET HA H N N 370 MET HB2 H N N 371 MET HB3 H N N 372 MET HG2 H N N 373 MET HG3 H N N 374 MET HE1 H N N 375 MET HE2 H N N 376 MET HE3 H N N 377 MET HXT H N N 378 PHE N N N N 379 PHE CA C N S 380 PHE C C N N 381 PHE O O N N 382 PHE CB C N N 383 PHE CG C Y N 384 PHE CD1 C Y N 385 PHE CD2 C Y N 386 PHE CE1 C Y N 387 PHE CE2 C Y N 388 PHE CZ C Y N 389 PHE OXT O N N 390 PHE H H N N 391 PHE H2 H N N 392 PHE HA H N N 393 PHE HB2 H N N 394 PHE HB3 H N N 395 PHE HD1 H N N 396 PHE HD2 H N N 397 PHE HE1 H N N 398 PHE HE2 H N N 399 PHE HZ H N N 400 PHE HXT H N N 401 SER N N N N 402 SER CA C N S 403 SER C C N N 404 SER O O N N 405 SER CB C N N 406 SER OG O N N 407 SER OXT O N N 408 SER H H N N 409 SER H2 H N N 410 SER HA H N N 411 SER HB2 H N N 412 SER HB3 H N N 413 SER HG H N N 414 SER HXT H N N 415 THR N N N N 416 THR CA C N S 417 THR C C N N 418 THR O O N N 419 THR CB C N R 420 THR OG1 O N N 421 THR CG2 C N N 422 THR OXT O N N 423 THR H H N N 424 THR H2 H N N 425 THR HA H N N 426 THR HB H N N 427 THR HG1 H N N 428 THR HG21 H N N 429 THR HG22 H N N 430 THR HG23 H N N 431 THR HXT H N N 432 TYR N N N N 433 TYR CA C N S 434 TYR C C N N 435 TYR O O N N 436 TYR CB C N N 437 TYR CG C Y N 438 TYR CD1 C Y N 439 TYR CD2 C Y N 440 TYR CE1 C Y N 441 TYR CE2 C Y N 442 TYR CZ C Y N 443 TYR OH O N N 444 TYR OXT O N N 445 TYR H H N N 446 TYR H2 H N N 447 TYR HA H N N 448 TYR HB2 H N N 449 TYR HB3 H N N 450 TYR HD1 H N N 451 TYR HD2 H N N 452 TYR HE1 H N N 453 TYR HE2 H N N 454 TYR HH H N N 455 TYR HXT H N N 456 VAL N N N N 457 VAL CA C N S 458 VAL C C N N 459 VAL O O N N 460 VAL CB C N N 461 VAL CG1 C N N 462 VAL CG2 C N N 463 VAL OXT O N N 464 VAL H H N N 465 VAL H2 H N N 466 VAL HA H N N 467 VAL HB H N N 468 VAL HG11 H N N 469 VAL HG12 H N N 470 VAL HG13 H N N 471 VAL HG21 H N N 472 VAL HG22 H N N 473 VAL HG23 H N N 474 VAL HXT H N N 475 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 MET N CA sing N N 354 MET N H sing N N 355 MET N H2 sing N N 356 MET CA C sing N N 357 MET CA CB sing N N 358 MET CA HA sing N N 359 MET C O doub N N 360 MET C OXT sing N N 361 MET CB CG sing N N 362 MET CB HB2 sing N N 363 MET CB HB3 sing N N 364 MET CG SD sing N N 365 MET CG HG2 sing N N 366 MET CG HG3 sing N N 367 MET SD CE sing N N 368 MET CE HE1 sing N N 369 MET CE HE2 sing N N 370 MET CE HE3 sing N N 371 MET OXT HXT sing N N 372 PHE N CA sing N N 373 PHE N H sing N N 374 PHE N H2 sing N N 375 PHE CA C sing N N 376 PHE CA CB sing N N 377 PHE CA HA sing N N 378 PHE C O doub N N 379 PHE C OXT sing N N 380 PHE CB CG sing N N 381 PHE CB HB2 sing N N 382 PHE CB HB3 sing N N 383 PHE CG CD1 doub Y N 384 PHE CG CD2 sing Y N 385 PHE CD1 CE1 sing Y N 386 PHE CD1 HD1 sing N N 387 PHE CD2 CE2 doub Y N 388 PHE CD2 HD2 sing N N 389 PHE CE1 CZ doub Y N 390 PHE CE1 HE1 sing N N 391 PHE CE2 CZ sing Y N 392 PHE CE2 HE2 sing N N 393 PHE CZ HZ sing N N 394 PHE OXT HXT sing N N 395 SER N CA sing N N 396 SER N H sing N N 397 SER N H2 sing N N 398 SER CA C sing N N 399 SER CA CB sing N N 400 SER CA HA sing N N 401 SER C O doub N N 402 SER C OXT sing N N 403 SER CB OG sing N N 404 SER CB HB2 sing N N 405 SER CB HB3 sing N N 406 SER OG HG sing N N 407 SER OXT HXT sing N N 408 THR N CA sing N N 409 THR N H sing N N 410 THR N H2 sing N N 411 THR CA C sing N N 412 THR CA CB sing N N 413 THR CA HA sing N N 414 THR C O doub N N 415 THR C OXT sing N N 416 THR CB OG1 sing N N 417 THR CB CG2 sing N N 418 THR CB HB sing N N 419 THR OG1 HG1 sing N N 420 THR CG2 HG21 sing N N 421 THR CG2 HG22 sing N N 422 THR CG2 HG23 sing N N 423 THR OXT HXT sing N N 424 TYR N CA sing N N 425 TYR N H sing N N 426 TYR N H2 sing N N 427 TYR CA C sing N N 428 TYR CA CB sing N N 429 TYR CA HA sing N N 430 TYR C O doub N N 431 TYR C OXT sing N N 432 TYR CB CG sing N N 433 TYR CB HB2 sing N N 434 TYR CB HB3 sing N N 435 TYR CG CD1 doub Y N 436 TYR CG CD2 sing Y N 437 TYR CD1 CE1 sing Y N 438 TYR CD1 HD1 sing N N 439 TYR CD2 CE2 doub Y N 440 TYR CD2 HD2 sing N N 441 TYR CE1 CZ doub Y N 442 TYR CE1 HE1 sing N N 443 TYR CE2 CZ sing Y N 444 TYR CE2 HE2 sing N N 445 TYR CZ OH sing N N 446 TYR OH HH sing N N 447 TYR OXT HXT sing N N 448 VAL N CA sing N N 449 VAL N H sing N N 450 VAL N H2 sing N N 451 VAL CA C sing N N 452 VAL CA CB sing N N 453 VAL CA HA sing N N 454 VAL C O doub N N 455 VAL C OXT sing N N 456 VAL CB CG1 sing N N 457 VAL CB CG2 sing N N 458 VAL CB HB sing N N 459 VAL CG1 HG11 sing N N 460 VAL CG1 HG12 sing N N 461 VAL CG1 HG13 sing N N 462 VAL CG2 HG21 sing N N 463 VAL CG2 HG22 sing N N 464 VAL CG2 HG23 sing N N 465 VAL OXT HXT sing N N 466 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4WUL 'double helix' 4WUL 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DC 2 1_555 D DG 25 1_555 0.352 -0.135 0.171 8.101 -11.749 0.360 1 H_DC-123:DG-123_C H -123 ? C -123 ? 19 1 1 C DT 3 1_555 D DA 24 1_555 -0.158 -0.119 0.186 -3.027 -9.939 11.789 2 H_DT-122:DA-122_C H -122 ? C -122 ? 20 1 1 C DA 4 1_555 D DT 23 1_555 0.044 -0.602 -0.213 0.205 -6.051 -2.696 3 H_DA-121:DT-121_C H -121 ? C -121 ? 20 1 1 C DG 5 1_555 D DC 22 1_555 -0.191 -0.392 0.234 -7.077 -20.317 3.866 4 H_DG-120:DC-120_C H -120 ? C -120 ? 19 1 1 C DT 6 1_555 D DA 21 1_555 0.309 0.577 -0.112 0.186 -5.566 13.767 5 H_DT-119:DA-119_C H -119 ? C -119 ? ? ? 1 C DC 7 1_555 D DG 20 1_555 0.228 -0.303 -0.197 5.570 -15.382 6.158 6 H_DC-118:DG-118_C H -118 ? C -118 ? 19 1 1 C DC 8 1_555 D DG 19 1_555 -0.101 -0.049 0.138 2.965 -13.090 11.512 7 H_DC-117:DG-117_C H -117 ? C -117 ? 19 1 1 C DT 9 1_555 D DA 18 1_555 -0.282 -0.504 -0.067 9.847 -12.171 -4.636 8 H_DT-116:DA-116_C H -116 ? C -116 ? 20 1 1 C DT 10 1_555 D DA 17 1_555 -0.221 -0.126 -0.034 8.619 -10.008 1.913 9 H_DT-115:DA-115_C H -115 ? C -115 ? 20 1 1 C DA 11 1_555 D DT 16 1_555 0.142 -0.107 0.021 -5.502 -9.572 4.326 10 H_DA-114:DT-114_C H -114 ? C -114 ? 20 1 1 C DC 12 1_555 D DG 15 1_555 -0.660 -0.217 0.417 -6.930 -11.108 3.060 11 H_DC-113:DG-113_C H -113 ? C -113 ? 19 1 1 C DT 13 1_555 D DA 14 1_555 -1.397 -0.177 0.191 0.663 -6.207 4.545 12 H_DT-112:DA-112_C H -112 ? C -112 ? 20 1 1 C DA 14 1_555 D DT 13 1_555 -0.475 -0.368 -0.111 -4.278 -16.618 4.838 13 H_DA-111:DT-111_C H -111 ? C -111 ? 20 1 1 C DA 15 1_555 D DT 12 1_555 0.471 -0.077 0.267 6.944 -7.141 3.331 14 H_DA-110:DT-110_C H -110 ? C -110 ? 20 1 1 C DT 16 1_555 D DA 11 1_555 0.117 -0.464 0.317 11.504 -16.458 0.566 15 H_DT-109:DA-109_C H -109 ? C -109 ? 20 1 1 C DG 17 1_555 D DC 10 1_555 -0.018 -0.639 -0.598 -8.907 -8.152 -2.302 16 H_DG-108:DC-108_C H -108 ? C -108 ? 19 1 1 C DA 18 1_555 D DT 9 1_555 -0.108 -0.052 0.026 4.877 -14.923 13.204 17 H_DA-107:DT-107_C H -107 ? C -107 ? 20 1 1 C DG 19 1_555 D DC 8 1_555 0.168 -0.269 -0.174 -10.395 -12.239 -0.534 18 H_DG-106:DC-106_C H -106 ? C -106 ? 19 1 1 C DA 20 1_555 D DT 7 1_555 0.937 -0.378 0.216 -8.189 -10.448 -0.635 19 H_DA-105:DT-105_C H -105 ? C -105 ? 20 1 1 C DA 21 1_555 D DT 6 1_555 0.379 -0.504 0.156 -3.004 -10.740 0.449 20 H_DA-104:DT-104_C H -104 ? C -104 ? 20 1 1 C DG 22 1_555 D DC 5 1_555 0.225 -0.423 0.447 -2.462 -11.875 1.072 21 H_DG-103:DC-103_C H -103 ? C -103 ? 19 1 1 C DA 23 1_555 D DT 4 1_555 0.373 -0.232 0.358 0.532 -19.418 1.275 22 H_DA-102:DT-102_C H -102 ? C -102 ? 20 1 1 C DA 24 1_555 D DT 3 1_555 1.189 0.076 -0.061 -11.893 -23.346 6.661 23 H_DA-101:DT-101_C H -101 ? C -101 ? ? ? 1 C DT 26 1_555 D DA 1 1_555 1.092 1.483 -0.481 -10.105 -16.773 -100.142 24 H_DT-99:DA-99_C H -99 ? C -99 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DC 2 1_555 D DG 25 1_555 C DT 3 1_555 D DA 24 1_555 1.671 -0.403 3.498 4.610 -4.031 33.843 0.018 -2.028 3.709 -6.855 -7.839 34.377 1 HH_DC-123DT-122:DA-122DG-123_CC H -123 ? C -123 ? H -122 ? C -122 ? 1 C DT 3 1_555 D DA 24 1_555 C DA 4 1_555 D DT 23 1_555 -0.745 -1.008 3.250 4.881 12.007 25.703 -4.486 2.498 2.375 25.061 -10.188 28.737 2 HH_DT-122DA-121:DT-121DA-122_CC H -122 ? C -122 ? H -121 ? C -121 ? 1 C DA 4 1_555 D DT 23 1_555 C DG 5 1_555 D DC 22 1_555 0.455 -1.072 3.506 -6.856 6.760 31.329 -3.097 -2.020 3.050 12.162 12.336 32.740 3 HH_DA-121DG-120:DC-120DT-121_CC H -121 ? C -121 ? H -120 ? C -120 ? 1 C DG 5 1_555 D DC 22 1_555 C DT 6 1_555 D DA 21 1_555 -0.658 -0.884 3.090 4.358 5.596 28.546 -2.829 2.143 2.742 11.134 -8.670 29.396 4 HH_DG-120DT-119:DA-119DC-120_CC H -120 ? C -120 ? H -119 ? C -119 ? 1 C DT 6 1_555 D DA 21 1_555 C DC 7 1_555 D DG 20 1_555 -0.432 -0.110 3.200 2.561 4.365 29.689 -1.078 1.340 3.105 8.441 -4.953 30.107 5 HH_DT-119DC-118:DG-118DA-119_CC H -119 ? C -119 ? H -118 ? C -118 ? 1 C DC 7 1_555 D DG 20 1_555 C DC 8 1_555 D DG 19 1_555 1.111 -0.475 3.351 0.096 6.432 31.802 -1.995 -1.973 3.199 11.590 -0.173 32.430 6 HH_DC-118DC-117:DG-117DG-118_CC H -118 ? C -118 ? H -117 ? C -117 ? 1 C DC 8 1_555 D DG 19 1_555 C DT 9 1_555 D DA 18 1_555 -0.436 -0.681 3.088 2.266 2.197 27.732 -1.899 1.407 2.982 4.564 -4.708 27.907 7 HH_DC-117DT-116:DA-116DG-117_CC H -117 ? C -117 ? H -116 ? C -116 ? 1 C DT 9 1_555 D DA 18 1_555 C DT 10 1_555 D DA 17 1_555 0.384 -0.703 3.382 0.965 -4.872 33.808 -0.387 -0.493 3.456 -8.322 -1.649 34.161 8 HH_DT-116DT-115:DA-115DA-116_CC H -116 ? C -116 ? H -115 ? C -115 ? 1 C DT 10 1_555 D DA 17 1_555 C DA 11 1_555 D DT 16 1_555 0.069 -0.489 3.695 -0.687 -3.174 41.214 -0.306 -0.181 3.720 -4.500 0.974 41.336 9 HH_DT-115DA-114:DT-114DA-115_CC H -115 ? C -115 ? H -114 ? C -114 ? 1 C DA 11 1_555 D DT 16 1_555 C DC 12 1_555 D DG 15 1_555 0.224 -1.115 3.372 -3.853 -6.436 28.538 -0.729 -1.313 3.475 -12.780 7.651 29.488 10 HH_DA-114DC-113:DG-113DT-114_CC H -114 ? C -114 ? H -113 ? C -113 ? 1 C DC 12 1_555 D DG 15 1_555 C DT 13 1_555 D DA 14 1_555 -0.102 -0.876 3.103 -0.556 -0.085 27.955 -1.793 0.086 3.107 -0.175 1.150 27.961 11 HH_DC-113DT-112:DA-112DG-113_CC H -113 ? C -113 ? H -112 ? C -112 ? 1 C DT 13 1_555 D DA 14 1_555 C DA 14 1_555 D DT 13 1_555 -0.634 -0.488 3.423 1.366 4.510 34.817 -1.506 1.262 3.309 7.494 -2.270 35.125 12 HH_DT-112DA-111:DT-111DA-112_CC H -112 ? C -112 ? H -111 ? C -111 ? 1 C DA 14 1_555 D DT 13 1_555 C DA 15 1_555 D DT 12 1_555 0.117 -0.068 3.128 -3.951 5.527 33.055 -0.973 -0.813 3.043 9.588 6.853 33.727 13 HH_DA-111DA-110:DT-110DT-111_CC H -111 ? C -111 ? H -110 ? C -110 ? 1 C DA 15 1_555 D DT 12 1_555 C DT 16 1_555 D DA 11 1_555 0.941 -1.101 3.138 -1.525 3.322 26.042 -3.250 -2.450 2.918 7.326 3.363 26.293 14 HH_DA-110DT-109:DA-109DT-110_CC H -110 ? C -110 ? H -109 ? C -109 ? 1 C DT 16 1_555 D DA 11 1_555 C DG 17 1_555 D DC 10 1_555 -0.517 -1.231 3.780 8.436 11.181 30.598 -4.101 2.382 2.926 19.929 -15.037 33.582 15 HH_DT-109DG-108:DC-108DA-109_CC H -109 ? C -109 ? H -108 ? C -108 ? 1 C DG 17 1_555 D DC 10 1_555 C DA 18 1_555 D DT 9 1_555 0.701 -0.537 3.054 -6.555 9.391 25.071 -3.155 -2.888 2.442 20.333 14.194 27.525 16 HH_DG-108DA-107:DT-107DC-108_CC H -108 ? C -108 ? H -107 ? C -107 ? 1 C DA 18 1_555 D DT 9 1_555 C DG 19 1_555 D DC 8 1_555 -1.680 -0.235 3.594 -4.272 0.773 37.890 -0.470 1.963 3.749 1.185 6.553 38.129 17 HH_DA-107DG-106:DC-106DT-107_CC H -107 ? C -107 ? H -106 ? C -106 ? 1 C DG 19 1_555 D DC 8 1_555 C DA 20 1_555 D DT 7 1_555 -0.498 -0.207 3.348 -3.844 1.964 37.510 -0.581 0.259 3.366 3.042 5.954 37.749 18 HH_DG-106DA-105:DT-105DC-106_CC H -106 ? C -106 ? H -105 ? C -105 ? 1 C DA 20 1_555 D DT 7 1_555 C DA 21 1_555 D DT 6 1_555 -0.534 -0.429 3.114 -0.607 0.864 27.233 -1.117 0.989 3.110 1.834 1.288 27.253 19 HH_DA-105DA-104:DT-104DT-105_CC H -105 ? C -105 ? H -104 ? C -104 ? 1 C DA 21 1_555 D DT 6 1_555 C DG 22 1_555 D DC 5 1_555 -0.402 -0.232 3.269 -4.228 3.602 34.010 -0.954 0.019 3.253 6.108 7.169 34.448 20 HH_DA-104DG-103:DC-103DT-104_CC H -104 ? C -104 ? H -103 ? C -103 ? 1 C DG 22 1_555 D DC 5 1_555 C DA 23 1_555 D DT 4 1_555 -0.086 -0.357 3.184 2.031 8.791 31.646 -2.074 0.485 2.970 15.725 -3.633 32.875 21 HH_DG-103DA-102:DT-102DC-103_CC H -103 ? C -103 ? H -102 ? C -102 ? 1 C DA 23 1_555 D DT 4 1_555 C DA 24 1_555 D DT 3 1_555 -0.329 -0.118 3.586 2.236 5.957 45.512 -0.714 0.633 3.525 7.655 -2.874 45.931 22 HH_DA-102DA-101:DT-101DT-102_CC H -102 ? C -102 ? H -101 ? C -101 ? 1 C DA 24 1_555 D DT 3 1_555 C DT 26 1_555 D DA 1 1_555 -0.934 0.857 6.104 4.016 -9.817 34.731 3.879 2.524 5.529 -15.991 -6.542 36.267 23 HH_DA-101DT-99:DA-99DT-101_CC H -101 ? C -101 ? H -99 ? C -99 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number R01AI080714 _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4WTO _pdbx_initial_refinement_model.details ? #