HEADER TRANSPORT PROTEIN 03-NOV-14 4WUT TITLE CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN TITLE 2 (IPR025997) FROM AGROBACTERIUM VITIS (AVI_5133, TARGET EFI-511220) TITLE 3 WITH BOUND D-FUCOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ABC TRANSPORTER SUBSTRATE BINDING PROTEIN (RIBOSE); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ABC TRANSPORTER SOLUTE BINDING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM VITIS; SOURCE 3 ORGANISM_TAXID: 311402; SOURCE 4 STRAIN: S4 / ATCC BAA-846; SOURCE 5 GENE: RBSB, AVI_5133; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS ABC TRANSPORTER SOLUTE BINDING PROTEIN, ENZYME FUNCTION INITIATIVE, KEYWDS 2 EFI, STRUCTURAL GENOMICS, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,N.F.AL OBAIDI,R.TORO,L.L.MORISCO,J.BENACH,S.R.WASSERMAN, AUTHOR 2 J.D.ATTONITO,A.SCOTT GLENN,S.CHAMALA,S.CHOWDHURY,J.LAFLEUR,J.LOVE, AUTHOR 3 R.D.SEIDEL,K.L.WHALEN,J.A.GERLT,S.C.ALMO,ENZYME FUNCTION INITIATIVE AUTHOR 4 (EFI) REVDAT 4 27-DEC-23 4WUT 1 HETSYN REVDAT 3 29-JUL-20 4WUT 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE REVDAT 2 22-NOV-17 4WUT 1 COMPND SOURCE REMARK REVDAT 1 17-DEC-14 4WUT 0 JRNL AUTH M.W.VETTING,N.F.AL OBAIDI,R.TORO,L.L.MORISCO,J.BENACH, JRNL AUTH 2 S.R.WASSERMAN,J.D.ATTONITO,A.SCOTT GLENN,S.CHAMALA, JRNL AUTH 3 S.CHOWDHURY,J.LAFLEUR,J.LOVE,R.D.SEIDEL,K.L.WHALEN, JRNL AUTH 4 J.A.GERLT,S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) JRNL TITL CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING JRNL TITL 2 PROTEIN (IPR025997) FROM AGROBACTERIUM VITIS (AVI_5133, JRNL TITL 3 TARGET EFI-511220) WITH BOUND D-FUCOSE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.540 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 50105 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 2550 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.9334 - 3.9273 0.92 2610 145 0.1662 0.1820 REMARK 3 2 3.9273 - 3.1187 1.00 2704 161 0.1486 0.1852 REMARK 3 3 3.1187 - 2.7249 1.00 2675 152 0.1619 0.1764 REMARK 3 4 2.7249 - 2.4760 1.00 2691 134 0.1498 0.1761 REMARK 3 5 2.4760 - 2.2986 1.00 2699 107 0.1476 0.1737 REMARK 3 6 2.2986 - 2.1631 1.00 2646 146 0.1449 0.1796 REMARK 3 7 2.1631 - 2.0548 1.00 2642 148 0.1510 0.1476 REMARK 3 8 2.0548 - 1.9654 1.00 2658 140 0.1727 0.2001 REMARK 3 9 1.9654 - 1.8898 1.00 2632 140 0.1774 0.1953 REMARK 3 10 1.8898 - 1.8246 1.00 2645 141 0.1803 0.1892 REMARK 3 11 1.8246 - 1.7675 1.00 2606 146 0.2079 0.2044 REMARK 3 12 1.7675 - 1.7170 1.00 2625 144 0.2658 0.3087 REMARK 3 13 1.7170 - 1.6718 1.00 2650 120 0.2931 0.3487 REMARK 3 14 1.6718 - 1.6310 1.00 2630 140 0.3228 0.3590 REMARK 3 15 1.6310 - 1.5940 1.00 2612 136 0.3707 0.3783 REMARK 3 16 1.5940 - 1.5601 1.00 2589 157 0.4291 0.4906 REMARK 3 17 1.5601 - 1.5289 1.00 2599 164 0.5079 0.4282 REMARK 3 18 1.5289 - 1.5000 1.00 2642 129 0.6780 0.6302 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.46 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2228 REMARK 3 ANGLE : 1.262 3035 REMARK 3 CHIRALITY : 0.076 355 REMARK 3 PLANARITY : 0.006 387 REMARK 3 DIHEDRAL : 13.920 830 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4266 42.6180 40.9290 REMARK 3 T TENSOR REMARK 3 T11: 0.1300 T22: 0.1098 REMARK 3 T33: 0.2521 T12: -0.0018 REMARK 3 T13: -0.0216 T23: 0.0723 REMARK 3 L TENSOR REMARK 3 L11: 0.7556 L22: 2.6491 REMARK 3 L33: 1.4133 L12: -0.1564 REMARK 3 L13: -0.7726 L23: 0.3884 REMARK 3 S TENSOR REMARK 3 S11: -0.0043 S12: 0.0866 S13: 0.6116 REMARK 3 S21: -0.0134 S22: -0.0343 S23: -0.3210 REMARK 3 S31: -0.2634 S32: 0.0805 S33: 0.0625 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 52 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8223 43.9369 45.9895 REMARK 3 T TENSOR REMARK 3 T11: 0.2021 T22: 0.1164 REMARK 3 T33: 0.3430 T12: -0.0019 REMARK 3 T13: -0.0261 T23: 0.0393 REMARK 3 L TENSOR REMARK 3 L11: 0.6135 L22: 2.3026 REMARK 3 L33: 0.9287 L12: -1.1586 REMARK 3 L13: 0.0980 L23: -0.4110 REMARK 3 S TENSOR REMARK 3 S11: -0.0116 S12: 0.0134 S13: 0.4437 REMARK 3 S21: 0.1165 S22: -0.0223 S23: 0.0329 REMARK 3 S31: -0.3508 S32: 0.0474 S33: 0.0324 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9734 38.1985 49.4432 REMARK 3 T TENSOR REMARK 3 T11: 0.1126 T22: 0.1011 REMARK 3 T33: 0.1210 T12: 0.0384 REMARK 3 T13: -0.0049 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 1.2086 L22: 1.9972 REMARK 3 L33: 1.7295 L12: -0.0007 REMARK 3 L13: -0.1192 L23: -0.0340 REMARK 3 S TENSOR REMARK 3 S11: -0.0231 S12: -0.0533 S13: 0.2371 REMARK 3 S21: 0.1707 S22: 0.0496 S23: 0.0706 REMARK 3 S31: -0.2431 S32: -0.1622 S33: -0.0138 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 114 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0563 32.8714 38.6794 REMARK 3 T TENSOR REMARK 3 T11: 0.1014 T22: 0.2134 REMARK 3 T33: 0.1964 T12: -0.0006 REMARK 3 T13: -0.0329 T23: 0.0218 REMARK 3 L TENSOR REMARK 3 L11: 2.4239 L22: 2.1899 REMARK 3 L33: 3.0995 L12: -1.9436 REMARK 3 L13: -1.5750 L23: 0.5806 REMARK 3 S TENSOR REMARK 3 S11: -0.0604 S12: 0.1562 S13: -0.4708 REMARK 3 S21: -0.1204 S22: -0.1061 S23: 0.4482 REMARK 3 S31: 0.1915 S32: -0.5448 S33: 0.0859 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 133 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5586 17.4857 27.7343 REMARK 3 T TENSOR REMARK 3 T11: 0.1125 T22: 0.1734 REMARK 3 T33: 0.1106 T12: -0.0282 REMARK 3 T13: -0.0116 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 1.2198 L22: 2.1419 REMARK 3 L33: 2.7419 L12: -0.7614 REMARK 3 L13: -0.4064 L23: 1.0987 REMARK 3 S TENSOR REMARK 3 S11: 0.0288 S12: 0.2715 S13: -0.1182 REMARK 3 S21: -0.1071 S22: -0.0437 S23: 0.0861 REMARK 3 S31: 0.1108 S32: 0.0126 S33: 0.0062 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 164 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4398 17.9422 29.9031 REMARK 3 T TENSOR REMARK 3 T11: 0.0891 T22: 0.1456 REMARK 3 T33: 0.0915 T12: -0.0193 REMARK 3 T13: -0.0034 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 0.6813 L22: 2.8133 REMARK 3 L33: 4.6489 L12: -0.8025 REMARK 3 L13: -0.3502 L23: 2.9844 REMARK 3 S TENSOR REMARK 3 S11: -0.0343 S12: 0.2428 S13: -0.1993 REMARK 3 S21: 0.0482 S22: -0.2051 S23: 0.2773 REMARK 3 S31: 0.1628 S32: -0.4126 S33: 0.1724 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 181 THROUGH 208 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.3743 15.5247 38.1822 REMARK 3 T TENSOR REMARK 3 T11: 0.1000 T22: 0.0797 REMARK 3 T33: 0.0898 T12: 0.0021 REMARK 3 T13: 0.0010 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 1.1247 L22: 0.2504 REMARK 3 L33: 1.2968 L12: -0.4790 REMARK 3 L13: 0.1239 L23: -0.2923 REMARK 3 S TENSOR REMARK 3 S11: -0.0736 S12: 0.0473 S13: 0.0212 REMARK 3 S21: 0.0755 S22: 0.0560 S23: 0.0247 REMARK 3 S31: 0.0620 S32: 0.0415 S33: 0.0282 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 209 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2605 22.6608 30.2771 REMARK 3 T TENSOR REMARK 3 T11: 0.0854 T22: 0.1191 REMARK 3 T33: 0.1215 T12: 0.0022 REMARK 3 T13: 0.0151 T23: 0.0332 REMARK 3 L TENSOR REMARK 3 L11: 1.1976 L22: 1.8641 REMARK 3 L33: 1.0607 L12: -0.9619 REMARK 3 L13: -0.2191 L23: -0.0918 REMARK 3 S TENSOR REMARK 3 S11: 0.0951 S12: 0.2852 S13: 0.2094 REMARK 3 S21: -0.1218 S22: -0.0851 S23: -0.3018 REMARK 3 S31: -0.0174 S32: 0.0661 S33: -0.0010 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 267 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.7167 45.9199 35.0284 REMARK 3 T TENSOR REMARK 3 T11: 0.2090 T22: 0.1727 REMARK 3 T33: 0.2365 T12: 0.0509 REMARK 3 T13: -0.0138 T23: 0.0981 REMARK 3 L TENSOR REMARK 3 L11: 3.1511 L22: 1.2726 REMARK 3 L33: 1.6900 L12: -1.3657 REMARK 3 L13: -1.2967 L23: 0.7668 REMARK 3 S TENSOR REMARK 3 S11: 0.0453 S12: 0.2843 S13: 0.2540 REMARK 3 S21: -0.2462 S22: -0.1330 S23: -0.0800 REMARK 3 S31: -0.0840 S32: -0.1637 S33: 0.0350 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 284 THROUGH 298 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4587 39.3285 29.6858 REMARK 3 T TENSOR REMARK 3 T11: 0.2016 T22: 0.2515 REMARK 3 T33: 0.1538 T12: 0.0599 REMARK 3 T13: -0.0080 T23: 0.0887 REMARK 3 L TENSOR REMARK 3 L11: 3.2058 L22: 1.9393 REMARK 3 L33: 0.3969 L12: -1.4069 REMARK 3 L13: -0.8194 L23: 0.6929 REMARK 3 S TENSOR REMARK 3 S11: -0.0069 S12: 0.0127 S13: 0.1056 REMARK 3 S21: -0.1588 S22: -0.0582 S23: 0.1825 REMARK 3 S31: -0.1898 S32: -0.0078 S33: 0.0442 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 299 THROUGH 313 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.9168 35.2591 21.5186 REMARK 3 T TENSOR REMARK 3 T11: 0.2253 T22: 0.2480 REMARK 3 T33: 0.2076 T12: 0.0710 REMARK 3 T13: 0.0976 T23: 0.1786 REMARK 3 L TENSOR REMARK 3 L11: 0.3520 L22: 1.2528 REMARK 3 L33: 2.0727 L12: -0.0431 REMARK 3 L13: -0.8508 L23: 0.1071 REMARK 3 S TENSOR REMARK 3 S11: 0.1900 S12: 0.2851 S13: 0.0894 REMARK 3 S21: -0.3150 S22: -0.0727 S23: -0.1008 REMARK 3 S31: -0.1156 S32: -0.1607 S33: 0.0603 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WUT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000204544. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.1.27 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50200 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 42.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 12.10 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.10 REMARK 200 R MERGE FOR SHELL (I) : 0.75700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (29.0 MG/ML, 10 MM HEPES PH REMARK 280 7.5, 5 MM DTT, 10 MM D-FUCOSE); RESERVOIR (0.2 M CALCIUM ACETATE REMARK 280 0.1 M MES PH 6.0, 20 %(W/V) PEG 8000 ); CRYOPROTECTION (80% (50%) REMARK 280 PEG 3350, 20% RESERVOIR, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.09400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.21700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.68350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.21700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.09400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.68350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS A MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 SER A 8 REMARK 465 SER A 9 REMARK 465 GLY A 10 REMARK 465 VAL A 11 REMARK 465 ASP A 12 REMARK 465 LEU A 13 REMARK 465 GLY A 14 REMARK 465 THR A 15 REMARK 465 GLU A 16 REMARK 465 ASN A 17 REMARK 465 LEU A 18 REMARK 465 TYR A 19 REMARK 465 PHE A 20 REMARK 465 GLN A 21 REMARK 465 SER A 22 REMARK 465 MSE A 23 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE21 GLN A 146 O HOH A 501 1.54 REMARK 500 O HOH A 802 O HOH A 840 1.95 REMARK 500 O HOH A 596 O HOH A 775 2.10 REMARK 500 O HOH A 798 O HOH A 837 2.15 REMARK 500 O HOH A 725 O HOH A 846 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 62 -178.83 -66.73 REMARK 500 ASP A 114 -53.45 77.20 REMARK 500 TYR A 159 -90.05 -117.96 REMARK 500 ASP A 245 175.46 88.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 768 DISTANCE = 6.59 ANGSTROMS REMARK 525 HOH A 836 DISTANCE = 6.88 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 405 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 92 OD1 REMARK 620 2 ASP A 92 OD2 46.2 REMARK 620 3 ASN A 200 OD1 79.5 124.6 REMARK 620 4 ASP A 204 OD1 84.5 130.4 7.6 REMARK 620 5 ASP A 204 OD2 85.5 131.2 7.3 1.8 REMARK 620 6 HOH A 520 O 86.5 130.9 7.6 8.7 7.0 REMARK 620 7 HOH A 556 O 81.5 126.8 2.6 5.0 4.8 6.7 REMARK 620 8 HOH A 557 O 82.5 126.6 5.3 10.1 9.0 4.3 6.0 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 406 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 178 O REMARK 620 2 SER A 181 O 85.1 REMARK 620 3 HOH A 515 O 161.4 81.9 REMARK 620 4 HOH A 522 O 86.4 80.3 78.3 REMARK 620 5 HOH A 562 O 89.1 76.5 100.6 156.6 REMARK 620 6 HOH A 567 O 79.7 153.0 106.7 76.7 125.0 REMARK 620 7 HOH A 589 O 117.1 141.5 81.2 129.0 73.0 65.4 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-511220 RELATED DB: TARGETTRACK DBREF 4WUT A 24 313 UNP B9K0B2 B9K0B2_AGRVS 24 313 SEQADV 4WUT MSE A 1 UNP B9K0B2 INITIATING METHIONINE SEQADV 4WUT HIS A 2 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT HIS A 3 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT HIS A 4 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT HIS A 5 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT HIS A 6 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT HIS A 7 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT SER A 8 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT SER A 9 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT GLY A 10 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT VAL A 11 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT ASP A 12 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT LEU A 13 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT GLY A 14 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT THR A 15 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT GLU A 16 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT ASN A 17 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT LEU A 18 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT TYR A 19 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT PHE A 20 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT GLN A 21 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT SER A 22 UNP B9K0B2 EXPRESSION TAG SEQADV 4WUT MSE A 23 UNP B9K0B2 EXPRESSION TAG SEQRES 1 A 313 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 313 GLY THR GLU ASN LEU TYR PHE GLN SER MSE GLY GLU ILE SEQRES 3 A 313 ALA VAL ILE VAL LYS THR VAL ASN SER THR PHE TRP GLN SEQRES 4 A 313 ASN VAL GLN LYS GLY ALA ASP ALA ALA ILE GLY LYS GLN SEQRES 5 A 313 LYS ALA HIS THR ILE THR PHE GLN GLY PRO ALA ALA GLU SEQRES 6 A 313 SER ALA ILE ALA ASP GLN VAL ASN MSE VAL GLU ASN ALA SEQRES 7 A 313 VAL ASN ARG LYS VAL ASP ALA ILE LEU LEU ALA PRO SER SEQRES 8 A 313 ASP PRO ASP ALA LEU VAL PRO ALA VAL LYS LYS ALA TRP SEQRES 9 A 313 GLU ALA ARG ILE PRO VAL VAL ILE ILE ASP SER MSE LEU SEQRES 10 A 313 SER LYS ASP ALA GLU LYS TYR TYR GLN ALA PHE LEU ALA SEQRES 11 A 313 THR ASP ASN LYS ALA ALA GLY GLU LEU ALA ALA LYS ALA SEQRES 12 A 313 MSE ILE GLN LYS VAL GLY THR GLU GLY LYS ILE ALA VAL SEQRES 13 A 313 MSE SER TYR VAL ALA GLY ALA GLY SER GLU ILE GLY ARG SEQRES 14 A 313 VAL GLY GLY PHE THR ASP TYR ILE LYS ALA ASN SER LYS SEQRES 15 A 313 LEU GLN ILE VAL GLY PRO TYR TYR SER GLN SER GLN MSE SEQRES 16 A 313 ALA THR ALA LEU ASN GLN THR THR ASP VAL LEU ALA ALA SEQRES 17 A 313 ASN ALA ASP LEU LYS GLY ILE PHE GLY ALA ASN GLU PRO SEQRES 18 A 313 THR ALA ILE GLY MSE GLY ARG ALA ILE LYS GLN ALA GLY SEQRES 19 A 313 LYS ALA GLY LYS LEU VAL ALA ILE GLY PHE ASP GLY ASN SEQRES 20 A 313 GLN ASP LEU GLN GLU PHE VAL LYS ASP GLY THR LEU GLU SEQRES 21 A 313 ALA THR VAL VAL GLN GLY SER TYR GLN MSE GLY GLU LYS SEQRES 22 A 313 GLY VAL ASP THR LEU LEU LYS LEU LEU SER LYS GLU LYS SEQRES 23 A 313 VAL GLU LYS PHE ILE ASP THR GLY VAL VAL VAL VAL THR SEQRES 24 A 313 LYS GLN ASN ILE ASP LYS PRO GLU ALA LYS ASN VAL LEU SEQRES 25 A 313 TYR MODRES 4WUT MSE A 74 MET MODIFIED RESIDUE MODRES 4WUT MSE A 116 MET MODIFIED RESIDUE MODRES 4WUT MSE A 144 MET MODIFIED RESIDUE MODRES 4WUT MSE A 157 MET MODIFIED RESIDUE MODRES 4WUT MSE A 195 MET MODIFIED RESIDUE MODRES 4WUT MSE A 226 MET MODIFIED RESIDUE MODRES 4WUT MSE A 270 MET MODIFIED RESIDUE HET MSE A 74 17 HET MSE A 116 17 HET MSE A 144 17 HET MSE A 157 17 HET MSE A 195 34 HET MSE A 226 17 HET MSE A 270 17 HET CL A 401 1 HET CL A 402 1 HET CL A 403 1 HET FCB A 404 11 HET CA A 405 1 HET CA A 406 1 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM FCB BETA-D-FUCOPYRANOSE HETNAM CA CALCIUM ION HETSYN FCB BETA-D-FUCOSE; 6-DEOXY-BETA-D-GALACTOPYRANOSE; D- HETSYN 2 FCB FUCOSE; FUCOSE FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 2 CL 3(CL 1-) FORMUL 5 FCB C6 H12 O5 FORMUL 6 CA 2(CA 2+) FORMUL 8 HOH *368(H2 O) HELIX 1 AA1 SER A 35 GLY A 50 1 16 HELIX 2 AA2 ALA A 67 ARG A 81 1 15 HELIX 3 AA3 LEU A 96 ALA A 106 1 11 HELIX 4 AA4 SER A 118 TYR A 125 5 8 HELIX 5 AA5 ASP A 132 GLY A 149 1 18 HELIX 6 AA6 ALA A 163 SER A 181 1 19 HELIX 7 AA7 GLN A 194 ASN A 209 1 16 HELIX 8 AA8 ASN A 219 ALA A 233 1 15 HELIX 9 AA9 ASN A 247 ASP A 256 1 10 HELIX 10 AB1 GLY A 266 SER A 283 1 18 HELIX 11 AB2 LYS A 305 ASN A 310 1 6 SHEET 1 AA1 6 THR A 56 GLN A 60 0 SHEET 2 AA1 6 GLU A 25 ILE A 29 1 N VAL A 28 O THR A 58 SHEET 3 AA1 6 ALA A 85 LEU A 88 1 O LEU A 87 N ILE A 29 SHEET 4 AA1 6 VAL A 110 ILE A 113 1 O VAL A 111 N LEU A 88 SHEET 5 AA1 6 ALA A 127 ALA A 130 1 O ALA A 127 N ILE A 112 SHEET 6 AA1 6 PHE A 290 ASP A 292 1 O ILE A 291 N PHE A 128 SHEET 1 AA2 6 GLN A 184 TYR A 190 0 SHEET 2 AA2 6 LYS A 153 SER A 158 1 N SER A 158 O TYR A 189 SHEET 3 AA2 6 GLY A 214 GLY A 217 1 O PHE A 216 N MSE A 157 SHEET 4 AA2 6 VAL A 240 PHE A 244 1 O VAL A 240 N ILE A 215 SHEET 5 AA2 6 ALA A 261 GLN A 265 1 O ALA A 261 N GLY A 243 SHEET 6 AA2 6 VAL A 295 VAL A 298 -1 O VAL A 296 N VAL A 264 LINK C ASN A 73 N MSE A 74 1555 1555 1.33 LINK C MSE A 74 N VAL A 75 1555 1555 1.33 LINK C SER A 115 N MSE A 116 1555 1555 1.32 LINK C MSE A 116 N LEU A 117 1555 1555 1.32 LINK C ALA A 143 N MSE A 144 1555 1555 1.33 LINK C MSE A 144 N ILE A 145 1555 1555 1.33 LINK C VAL A 156 N MSE A 157 1555 1555 1.33 LINK C MSE A 157 N SER A 158 1555 1555 1.34 LINK C GLN A 194 N AMSE A 195 1555 1555 1.32 LINK C GLN A 194 N BMSE A 195 1555 1555 1.34 LINK C AMSE A 195 N ALA A 196 1555 1555 1.33 LINK C BMSE A 195 N ALA A 196 1555 1555 1.33 LINK C GLY A 225 N MSE A 226 1555 1555 1.32 LINK C MSE A 226 N GLY A 227 1555 1555 1.33 LINK C GLN A 269 N MSE A 270 1555 1555 1.33 LINK C MSE A 270 N GLY A 271 1555 1555 1.33 LINK OD1 ASP A 92 CA CA A 405 1555 4456 2.34 LINK OD2 ASP A 92 CA CA A 405 1555 4456 3.05 LINK O LYS A 178 CA CA A 406 1555 1555 2.33 LINK O SER A 181 CA CA A 406 1555 1555 2.51 LINK OD1 ASN A 200 CA CA A 405 1555 1555 2.42 LINK OD1 ASP A 204 CA CA A 405 1555 1555 2.41 LINK OD2 ASP A 204 CA CA A 405 1555 1555 2.48 LINK CA CA A 405 O HOH A 520 1555 4556 2.44 LINK CA CA A 405 O HOH A 556 1555 1555 2.46 LINK CA CA A 405 O HOH A 557 1555 4556 2.46 LINK CA CA A 406 O HOH A 515 1555 3545 2.36 LINK CA CA A 406 O HOH A 522 1555 3545 2.42 LINK CA CA A 406 O HOH A 562 1555 1555 2.37 LINK CA CA A 406 O HOH A 567 1555 1555 2.43 LINK CA CA A 406 O HOH A 589 1555 1555 2.33 CISPEP 1 GLY A 187 PRO A 188 0 1.80 CRYST1 48.188 69.367 92.434 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020752 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014416 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010819 0.00000