HEADER OXIDOREDUCTASE 19-NOV-14 4WZC TITLE UNDERSTANDING EXTRADIOL DIOXYGENASE MECHANISM IN NAD+ BIOSYNTHESIS BY TITLE 2 VIEWING CATALYTIC INTERMEDIATES - 2,3-CIS-4,5-TRANS ACMS BOUND TO TITLE 3 I142A MUTANT HAO CAVEAT 4WZC RESIDUE A ALA 142 AND RESIDUE A VAL 143 ARE NOT PROPERLY CAVEAT 2 4WZC LINKED: DISTANCE BETWEEN C AND N IS 1.05. COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-HYDROXYANTHRANILATE 3,4-DIOXYGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 3-HYDROXYANTHRANILATE OXYGENASE,3-HAO,3-HYDROXYANTHRANILIC COMPND 5 ACID DIOXYGENASE,HAD; COMPND 6 EC: 1.13.11.6; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RALSTONIA METALLIDURANS; SOURCE 3 ORGANISM_TAXID: 266264; SOURCE 4 STRAIN: CH34 / ATCC 43123 / DSM 2839; SOURCE 5 GENE: NBAC, RMET_5193; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BI-CUPIN IRON-BINDING, DIOXYGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR F.LIU,A.LIU REVDAT 4 27-SEP-23 4WZC 1 REMARK REVDAT 3 09-AUG-17 4WZC 1 REMARK REVDAT 2 19-APR-17 4WZC 1 HET HETNAM LINK SITE REVDAT 2 2 1 ATOM REVDAT 1 10-FEB-16 4WZC 0 JRNL AUTH F.LIU,A.LIU JRNL TITL PROBING EXTRADIOL DIOXYGENASE MECHANISM IN NAD+ BIOSYNTHESIS JRNL TITL 2 BY VIEWING REACTION CYCLE INTERMEDIATES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.7 REMARK 3 NUMBER OF REFLECTIONS : 18518 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 947 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.0533 - 3.5232 0.99 3098 155 0.1949 0.2423 REMARK 3 2 3.5232 - 2.7969 0.99 2870 148 0.2121 0.2710 REMARK 3 3 2.7969 - 2.4434 1.00 2830 154 0.2174 0.2525 REMARK 3 4 2.4434 - 2.2201 1.00 2818 153 0.2023 0.2859 REMARK 3 5 2.2201 - 2.0610 0.94 2622 148 0.2114 0.2688 REMARK 3 6 2.0610 - 1.9395 0.72 1973 109 0.2168 0.2731 REMARK 3 7 1.9395 - 1.8423 0.49 1360 80 0.2263 0.2964 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.023 1475 REMARK 3 ANGLE : 1.656 2015 REMARK 3 CHIRALITY : 0.084 201 REMARK 3 PLANARITY : 0.008 269 REMARK 3 DIHEDRAL : 12.670 538 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WZC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000204409. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 191 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21142 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.840 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.9 REMARK 200 DATA REDUNDANCY : 17.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 56.4700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 4R52 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, PH 9.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 153.73667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 76.86833 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 115.30250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 38.43417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 192.17083 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 153.73667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 76.86833 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 38.43417 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 115.30250 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 192.17083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 75 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 126 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 FE FE2 A 201 O 1UC A 203 1.66 REMARK 500 O HOH A 331 O HOH A 394 2.07 REMARK 500 N 1UC A 203 O HOH A 357 2.10 REMARK 500 O HOH A 323 O HOH A 352 2.13 REMARK 500 O HOH A 339 O HOH A 374 2.14 REMARK 500 O HOH A 367 O HOH A 381 2.14 REMARK 500 O HOH A 313 O HOH A 326 2.16 REMARK 500 OE1 GLU A 110 N 1UC A 203 2.19 REMARK 500 O HOH A 336 O HOH A 372 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ALA A 142 C VAL A 143 N -0.281 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 141 CA - C - N ANGL. DEV. = -15.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 21 31.81 -97.13 REMARK 500 HIS A 92 -3.59 73.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 51 ND1 REMARK 620 2 GLU A 57 OE1 144.2 REMARK 620 3 GLU A 57 OE2 91.9 52.5 REMARK 620 4 HIS A 95 NE2 108.5 84.6 100.2 REMARK 620 5 1UC A 203 O3 117.1 96.5 147.1 85.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 202 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 125 SG REMARK 620 2 CYS A 128 SG 119.2 REMARK 620 3 CYS A 162 SG 114.6 95.1 REMARK 620 4 CYS A 165 SG 99.9 116.8 112.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE2 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE2 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1UC A 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4R52 RELATED DB: PDB REMARK 900 PRODUCT BOUND FORM OF ENZYME 4R52 DBREF 4WZC A 1 174 UNP Q1LCS4 3HAO_RALME 1 174 SEQADV 4WZC HIS A -2 UNP Q1LCS4 EXPRESSION TAG SEQADV 4WZC HIS A -1 UNP Q1LCS4 EXPRESSION TAG SEQADV 4WZC HIS A 0 UNP Q1LCS4 EXPRESSION TAG SEQADV 4WZC ALA A 142 UNP Q1LCS4 ILE 142 ENGINEERED MUTATION SEQRES 1 A 177 HIS HIS HIS MET LEU THR TYR GLY ALA PRO PHE ASN PHE SEQRES 2 A 177 PRO ARG TRP ILE ASP GLU HIS ALA HIS LEU LEU LYS PRO SEQRES 3 A 177 PRO VAL GLY ASN ARG GLN VAL TRP GLN ASP SER ASP PHE SEQRES 4 A 177 ILE VAL THR VAL VAL GLY GLY PRO ASN HIS ARG THR ASP SEQRES 5 A 177 TYR HIS ASP ASP PRO LEU GLU GLU PHE PHE TYR GLN LEU SEQRES 6 A 177 ARG GLY ASN ALA TYR LEU ASN LEU TRP VAL ASP GLY ARG SEQRES 7 A 177 ARG GLU ARG ALA ASP LEU LYS GLU GLY ASP ILE PHE LEU SEQRES 8 A 177 LEU PRO PRO HIS VAL ARG HIS SER PRO GLN ARG PRO GLU SEQRES 9 A 177 ALA GLY SER ALA CYS LEU VAL ILE GLU ARG GLN ARG PRO SEQRES 10 A 177 ALA GLY MET LEU ASP GLY PHE GLU TRP TYR CYS ASP ALA SEQRES 11 A 177 CYS GLY HIS LEU VAL HIS ARG VAL GLU VAL GLN LEU LYS SEQRES 12 A 177 SER ALA VAL THR ASP LEU PRO PRO LEU PHE GLU SER PHE SEQRES 13 A 177 TYR ALA SER GLU ASP LYS ARG ARG CYS PRO HIS CYS GLY SEQRES 14 A 177 GLN VAL HIS PRO GLY ARG ALA ALA HET FE2 A 201 1 HET FE2 A 202 1 HET 1UC A 203 13 HETNAM FE2 FE (II) ION HETNAM 1UC (2E)-2-AMINO-3-[(1E)-3-OXOPROP-1-EN-1-YL]BUT-2-ENEDIOIC HETNAM 2 1UC ACID FORMUL 2 FE2 2(FE 2+) FORMUL 4 1UC C7 H7 N O5 FORMUL 5 HOH *98(H2 O) HELIX 1 AA1 ASN A 9 HIS A 17 1 9 HELIX 2 AA2 ALA A 18 LEU A 21 5 4 HELIX 3 AA3 SER A 141 LEU A 146 1 6 HELIX 4 AA4 LEU A 146 SER A 156 1 11 SHEET 1 AA1 5 ASN A 27 GLN A 29 0 SHEET 2 AA1 5 PHE A 36 VAL A 41 -1 O VAL A 40 N ARG A 28 SHEET 3 AA1 5 ALA A 105 ARG A 111 -1 O GLU A 110 N ILE A 37 SHEET 4 AA1 5 GLU A 57 ARG A 63 -1 N TYR A 60 O LEU A 107 SHEET 5 AA1 5 ILE A 86 LEU A 89 -1 O LEU A 89 N GLU A 57 SHEET 1 AA2 3 TYR A 50 ASP A 52 0 SHEET 2 AA2 3 ASP A 119 TYR A 124 -1 O GLU A 122 N TYR A 50 SHEET 3 AA2 3 LEU A 131 VAL A 137 -1 O VAL A 137 N ASP A 119 SHEET 1 AA3 3 ARG A 75 LEU A 81 0 SHEET 2 AA3 3 ALA A 66 VAL A 72 -1 N LEU A 70 O GLU A 77 SHEET 3 AA3 3 HIS A 95 GLN A 98 -1 O GLN A 98 N TYR A 67 LINK ND1 HIS A 51 FE FE2 A 201 1555 1555 2.22 LINK OE1 GLU A 57 FE FE2 A 201 1555 1555 2.62 LINK OE2 GLU A 57 FE FE2 A 201 1555 1555 2.16 LINK NE2 HIS A 95 FE FE2 A 201 1555 1555 2.04 LINK SG CYS A 125 FE FE2 A 202 1555 1555 2.29 LINK SG CYS A 128 FE FE2 A 202 1555 1555 2.17 LINK SG CYS A 162 FE FE2 A 202 1555 1555 2.33 LINK SG CYS A 165 FE FE2 A 202 1555 1555 2.35 LINK FE FE2 A 201 O3 1UC A 203 1555 1555 2.06 CISPEP 1 PRO A 23 PRO A 24 0 3.37 CISPEP 2 GLY A 43 PRO A 44 0 -2.51 SITE 1 AC1 4 HIS A 51 GLU A 57 HIS A 95 1UC A 203 SITE 1 AC2 4 CYS A 125 CYS A 128 CYS A 162 CYS A 165 SITE 1 AC3 11 ARG A 47 HIS A 51 GLU A 57 HIS A 95 SITE 2 AC3 11 PRO A 97 ARG A 99 GLU A 110 FE2 A 201 SITE 3 AC3 11 HOH A 342 HOH A 357 HOH A 365 CRYST1 58.282 58.282 230.605 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017158 0.009906 0.000000 0.00000 SCALE2 0.000000 0.019812 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004336 0.00000