HEADER SIGNALING PROTEIN 24-NOV-14 4X1H TITLE OPSIN/G(ALPHA) PEPTIDE COMPLEX STABILIZED BY NONYL-GLUCOSIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RHODOPSIN; COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: C-TERMINAL DERIVED PEPTIDE OF GUANINE NUCLEOTIDE-BINDING COMPND 6 PROTEIN G(T) SUBUNIT ALPHA-1; COMPND 7 CHAIN: C; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 TISSUE: RETINA; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 9 ORGANISM_TAXID: 9913 KEYWDS RHODOPSIN, GPCR, MEMBRANE PROTEIN, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.BLANKENSHIP,D.T.LODOWSKI REVDAT 9 13-NOV-24 4X1H 1 REMARK REVDAT 8 27-SEP-23 4X1H 1 HETSYN LINK REVDAT 7 29-JUL-20 4X1H 1 COMPND REMARK HETNAM LINK REVDAT 7 2 1 SITE ATOM REVDAT 6 11-DEC-19 4X1H 1 REMARK REVDAT 5 22-NOV-17 4X1H 1 REMARK REVDAT 4 06-SEP-17 4X1H 1 JRNL REMARK REVDAT 3 16-DEC-15 4X1H 1 JRNL REVDAT 2 18-NOV-15 4X1H 1 JRNL REVDAT 1 04-NOV-15 4X1H 0 JRNL AUTH E.BLANKENSHIP,A.VAHEDI-FARIDI,D.T.LODOWSKI JRNL TITL THE HIGH-RESOLUTION STRUCTURE OF ACTIVATED OPSIN REVEALS A JRNL TITL 2 CONSERVED SOLVENT NETWORK IN THE TRANSMEMBRANE REGION JRNL TITL 3 ESSENTIAL FOR ACTIVATION. JRNL REF STRUCTURE V. 23 2358 2015 JRNL REFN ISSN 0969-2126 JRNL PMID 26526852 JRNL DOI 10.1016/J.STR.2015.09.015 REMARK 2 REMARK 2 RESOLUTION. 2.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1839) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 3 NUMBER OF REFLECTIONS : 50642 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2554 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.9135 - 5.9952 0.95 2861 146 0.1945 0.1799 REMARK 3 2 5.9952 - 4.7611 0.98 2882 143 0.1877 0.2039 REMARK 3 3 4.7611 - 4.1600 0.99 2884 158 0.1878 0.1870 REMARK 3 4 4.1600 - 3.7799 0.98 2857 155 0.1908 0.1944 REMARK 3 5 3.7799 - 3.5092 0.93 2697 153 0.1941 0.2112 REMARK 3 6 3.5092 - 3.3024 0.96 2766 179 0.2167 0.2288 REMARK 3 7 3.3024 - 3.1371 0.96 2775 142 0.2157 0.2432 REMARK 3 8 3.1371 - 3.0006 0.95 2745 158 0.2213 0.2493 REMARK 3 9 3.0006 - 2.8851 0.94 2703 139 0.2262 0.2713 REMARK 3 10 2.8851 - 2.7856 0.85 2515 125 0.2370 0.2729 REMARK 3 11 2.7856 - 2.6985 0.86 2496 135 0.2629 0.3427 REMARK 3 12 2.6985 - 2.6214 0.89 2613 114 0.2852 0.3164 REMARK 3 13 2.6214 - 2.5524 0.90 2607 121 0.2780 0.2908 REMARK 3 14 2.5524 - 2.4901 0.90 2574 155 0.2815 0.2726 REMARK 3 15 2.4901 - 2.4335 0.90 2603 137 0.3164 0.3474 REMARK 3 16 2.4335 - 2.3817 0.90 2587 146 0.3369 0.3743 REMARK 3 17 2.3817 - 2.3341 0.89 2577 131 0.3386 0.3425 REMARK 3 18 2.3341 - 2.2900 0.81 2346 117 0.3672 0.3405 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.090 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2972 REMARK 3 ANGLE : 0.878 4046 REMARK 3 CHIRALITY : 0.036 465 REMARK 3 PLANARITY : 0.004 488 REMARK 3 DIHEDRAL : 13.420 1082 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7998 -65.4033 -38.4804 REMARK 3 T TENSOR REMARK 3 T11: 0.5952 T22: 0.3035 REMARK 3 T33: 0.9137 T12: -0.0511 REMARK 3 T13: -0.0094 T23: 0.1878 REMARK 3 L TENSOR REMARK 3 L11: 4.3454 L22: 9.4111 REMARK 3 L33: 3.6838 L12: -3.7707 REMARK 3 L13: -1.1687 L23: 5.4167 REMARK 3 S TENSOR REMARK 3 S11: -0.0899 S12: 0.1805 S13: -0.1110 REMARK 3 S21: 0.4486 S22: 0.1161 S23: 1.1012 REMARK 3 S31: 0.6999 S32: -0.2875 S33: -0.0174 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 17 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7868 -38.1699 -40.1027 REMARK 3 T TENSOR REMARK 3 T11: 0.3487 T22: 0.2448 REMARK 3 T33: 0.6120 T12: 0.0085 REMARK 3 T13: 0.0516 T23: 0.0714 REMARK 3 L TENSOR REMARK 3 L11: 1.3209 L22: 2.3769 REMARK 3 L33: 1.2240 L12: -0.8568 REMARK 3 L13: -0.0239 L23: 0.1424 REMARK 3 S TENSOR REMARK 3 S11: -0.0543 S12: -0.0749 S13: -0.0358 REMARK 3 S21: 0.2766 S22: 0.0101 S23: -0.3866 REMARK 3 S31: 0.0365 S32: -0.0135 S33: 0.0254 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 141 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5914 -25.9207 -24.6398 REMARK 3 T TENSOR REMARK 3 T11: 0.6098 T22: 0.3557 REMARK 3 T33: 0.4004 T12: 0.0961 REMARK 3 T13: 0.1178 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 5.8354 L22: 2.7707 REMARK 3 L33: 4.3955 L12: 0.4622 REMARK 3 L13: 0.6078 L23: 0.1150 REMARK 3 S TENSOR REMARK 3 S11: -0.3995 S12: -0.6658 S13: 0.4105 REMARK 3 S21: 0.7293 S22: 0.1418 S23: 0.6164 REMARK 3 S31: -0.5508 S32: -0.2201 S33: 0.2163 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 169 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7642 -51.7568 -31.3877 REMARK 3 T TENSOR REMARK 3 T11: 0.6307 T22: 0.3554 REMARK 3 T33: 0.7749 T12: 0.1155 REMARK 3 T13: 0.1258 T23: 0.1674 REMARK 3 L TENSOR REMARK 3 L11: 2.9529 L22: 3.2721 REMARK 3 L33: 2.6611 L12: -1.8031 REMARK 3 L13: -2.2404 L23: 2.8112 REMARK 3 S TENSOR REMARK 3 S11: -0.6457 S12: -0.1799 S13: -0.5955 REMARK 3 S21: 0.6260 S22: 0.2994 S23: 0.2285 REMARK 3 S31: 0.3123 S32: -0.2001 S33: 0.2338 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 186 THROUGH 212 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2418 -52.5469 -29.1612 REMARK 3 T TENSOR REMARK 3 T11: 0.7197 T22: 0.4380 REMARK 3 T33: 0.8706 T12: 0.0188 REMARK 3 T13: 0.2001 T23: 0.1965 REMARK 3 L TENSOR REMARK 3 L11: 3.8289 L22: 0.4076 REMARK 3 L33: 2.8306 L12: -0.9699 REMARK 3 L13: -1.2147 L23: 0.8776 REMARK 3 S TENSOR REMARK 3 S11: -0.2181 S12: -0.3094 S13: -0.9232 REMARK 3 S21: 0.3426 S22: 0.1043 S23: 0.0796 REMARK 3 S31: 0.8015 S32: -0.1626 S33: -0.0413 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 213 THROUGH 240 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.5810 -25.4130 -36.9252 REMARK 3 T TENSOR REMARK 3 T11: 0.3819 T22: 0.4732 REMARK 3 T33: 0.7845 T12: 0.0600 REMARK 3 T13: 0.1538 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 3.9705 L22: 7.7854 REMARK 3 L33: 6.3582 L12: -4.3828 REMARK 3 L13: 3.3223 L23: -5.8634 REMARK 3 S TENSOR REMARK 3 S11: -0.3453 S12: -0.3235 S13: 0.4224 REMARK 3 S21: 0.4063 S22: 0.3585 S23: 0.7425 REMARK 3 S31: -0.3517 S32: -0.7067 S33: -0.0694 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 241 THROUGH 277 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2040 -35.4983 -42.5854 REMARK 3 T TENSOR REMARK 3 T11: 0.3277 T22: 0.3766 REMARK 3 T33: 0.6612 T12: -0.0022 REMARK 3 T13: 0.1161 T23: -0.0394 REMARK 3 L TENSOR REMARK 3 L11: 5.7948 L22: 6.4099 REMARK 3 L33: 2.9001 L12: -5.0213 REMARK 3 L13: 1.2670 L23: -1.1336 REMARK 3 S TENSOR REMARK 3 S11: -0.1855 S12: -0.1389 S13: 0.0704 REMARK 3 S21: 0.0477 S22: 0.1240 S23: -0.2363 REMARK 3 S31: 0.1319 S32: -0.3690 S33: 0.0838 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 278 THROUGH 306 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7290 -46.3657 -43.7458 REMARK 3 T TENSOR REMARK 3 T11: 0.7080 T22: 0.3519 REMARK 3 T33: 1.1024 T12: 0.0391 REMARK 3 T13: 0.1933 T23: 0.0452 REMARK 3 L TENSOR REMARK 3 L11: 0.7960 L22: 0.2944 REMARK 3 L33: 2.5966 L12: 0.3129 REMARK 3 L13: 1.2797 L23: 0.2059 REMARK 3 S TENSOR REMARK 3 S11: -0.0355 S12: -0.1077 S13: -1.1566 REMARK 3 S21: 0.8417 S22: 0.0154 S23: 0.3736 REMARK 3 S31: 1.0210 S32: 0.0694 S33: -0.1585 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 307 THROUGH 326 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.6797 -16.9530 -48.2677 REMARK 3 T TENSOR REMARK 3 T11: 0.5237 T22: 0.3421 REMARK 3 T33: 0.8125 T12: 0.0914 REMARK 3 T13: 0.0550 T23: 0.0746 REMARK 3 L TENSOR REMARK 3 L11: 5.7608 L22: 8.9413 REMARK 3 L33: 9.0282 L12: 6.3862 REMARK 3 L13: -4.4993 L23: -2.4053 REMARK 3 S TENSOR REMARK 3 S11: 0.1532 S12: 0.0768 S13: 0.1745 REMARK 3 S21: -0.0388 S22: 0.1251 S23: 0.0566 REMARK 3 S31: -0.3562 S32: 0.0972 S33: -0.3973 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 340 THROUGH 350 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6051 -14.9053 -38.9274 REMARK 3 T TENSOR REMARK 3 T11: 0.6174 T22: 0.5003 REMARK 3 T33: 0.8582 T12: 0.1955 REMARK 3 T13: 0.1419 T23: 0.1375 REMARK 3 L TENSOR REMARK 3 L11: 9.9619 L22: 4.1923 REMARK 3 L33: 2.9687 L12: -2.9519 REMARK 3 L13: 4.9010 L23: -0.0929 REMARK 3 S TENSOR REMARK 3 S11: -0.2639 S12: 0.3075 S13: 0.8262 REMARK 3 S21: 0.9278 S22: 0.2487 S23: 0.9118 REMARK 3 S31: -1.4576 S32: -0.7778 S33: 0.1742 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4X1H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000204877. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920 REMARK 200 MONOCHROMATOR : CRYO-COOLED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS, AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57205 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.230 REMARK 200 RESOLUTION RANGE LOW (A) : 39.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.02600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 56.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.85000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3CAP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.1M AMMONIUM SULFATE, 100MM CITRATE, REMARK 280 PH 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 121.06800 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 69.89864 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 36.57367 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 121.06800 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 69.89864 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 36.57367 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 121.06800 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 69.89864 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 36.57367 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 121.06800 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 69.89864 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 36.57367 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 121.06800 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 69.89864 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 36.57367 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 121.06800 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 69.89864 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 36.57367 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 139.79728 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 73.14733 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 139.79728 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 73.14733 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 139.79728 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 73.14733 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 139.79728 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 73.14733 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 139.79728 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 73.14733 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 139.79728 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 73.14733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 THE C-TERMINAL DERIVED PEPTIDE OF GUANINE NUCLEOTIDE-BINDING REMARK 400 PROTEIN G(T) IS DERIVED FROM 340-350 POSITIONS IN THE TRANSDUCIN REMARK 400 ALPHA SUBUNIT UTILIZING A PHAGE DISPLAY LIBRARY DERIVED FROM THE C REMARK 400 TERMINAL REGION OF TRANSDUCIN (ARIS, L, ET AL 2001) WITH SEQUENCE " REMARK 400 IKENLKDCGLF". THE CONSTRUCT IN THIS STRUCTURE HAS THE FOLLOWING REMARK 400 SEQUENCE: "VLEDLKSCGLF." HENCE THERE ARE THE FOLLOWING MUTATIONS REMARK 400 I340V, K341L, N342D, AND D346S. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 327 REMARK 465 LEU A 328 REMARK 465 GLY A 329 REMARK 465 ASP A 330 REMARK 465 ASP A 331 REMARK 465 GLU A 332 REMARK 465 ALA A 333 REMARK 465 SER A 334 REMARK 465 THR A 335 REMARK 465 THR A 336 REMARK 465 VAL A 337 REMARK 465 SER A 338 REMARK 465 LYS A 339 REMARK 465 THR A 340 REMARK 465 GLU A 341 REMARK 465 THR A 342 REMARK 465 SER A 343 REMARK 465 GLN A 344 REMARK 465 VAL A 345 REMARK 465 ALA A 346 REMARK 465 PRO A 347 REMARK 465 ALA A 348 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 2 -12.33 72.81 REMARK 500 GLN A 28 43.13 -102.49 REMARK 500 SER A 176 -160.66 62.22 REMARK 500 PHE A 212 -56.53 -139.53 REMARK 500 GLN A 237 54.07 -149.30 REMARK 500 HIS A 278 67.05 -111.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PLM A 1322 DBREF 4X1H A 1 348 UNP P02699 OPSD_BOVIN 1 348 DBREF 4X1H C 340 350 PDB 4X1H 4X1H 340 350 SEQRES 1 A 348 MET ASN GLY THR GLU GLY PRO ASN PHE TYR VAL PRO PHE SEQRES 2 A 348 SER ASN LYS THR GLY VAL VAL ARG SER PRO PHE GLU ALA SEQRES 3 A 348 PRO GLN TYR TYR LEU ALA GLU PRO TRP GLN PHE SER MET SEQRES 4 A 348 LEU ALA ALA TYR MET PHE LEU LEU ILE MET LEU GLY PHE SEQRES 5 A 348 PRO ILE ASN PHE LEU THR LEU TYR VAL THR VAL GLN HIS SEQRES 6 A 348 LYS LYS LEU ARG THR PRO LEU ASN TYR ILE LEU LEU ASN SEQRES 7 A 348 LEU ALA VAL ALA ASP LEU PHE MET VAL PHE GLY GLY PHE SEQRES 8 A 348 THR THR THR LEU TYR THR SER LEU HIS GLY TYR PHE VAL SEQRES 9 A 348 PHE GLY PRO THR GLY CYS ASN LEU GLU GLY PHE PHE ALA SEQRES 10 A 348 THR LEU GLY GLY GLU ILE ALA LEU TRP SER LEU VAL VAL SEQRES 11 A 348 LEU ALA ILE GLU ARG TYR VAL VAL VAL CYS LYS PRO MET SEQRES 12 A 348 SER ASN PHE ARG PHE GLY GLU ASN HIS ALA ILE MET GLY SEQRES 13 A 348 VAL ALA PHE THR TRP VAL MET ALA LEU ALA CYS ALA ALA SEQRES 14 A 348 PRO PRO LEU VAL GLY TRP SER ARG TYR ILE PRO GLU GLY SEQRES 15 A 348 MET GLN CYS SER CYS GLY ILE ASP TYR TYR THR PRO HIS SEQRES 16 A 348 GLU GLU THR ASN ASN GLU SER PHE VAL ILE TYR MET PHE SEQRES 17 A 348 VAL VAL HIS PHE ILE ILE PRO LEU ILE VAL ILE PHE PHE SEQRES 18 A 348 CYS TYR GLY GLN LEU VAL PHE THR VAL LYS GLU ALA ALA SEQRES 19 A 348 ALA GLN GLN GLN GLU SER ALA THR THR GLN LYS ALA GLU SEQRES 20 A 348 LYS GLU VAL THR ARG MET VAL ILE ILE MET VAL ILE ALA SEQRES 21 A 348 PHE LEU ILE CYS TRP LEU PRO TYR ALA GLY VAL ALA PHE SEQRES 22 A 348 TYR ILE PHE THR HIS GLN GLY SER ASP PHE GLY PRO ILE SEQRES 23 A 348 PHE MET THR ILE PRO ALA PHE PHE ALA LYS THR SER ALA SEQRES 24 A 348 VAL TYR ASN PRO VAL ILE TYR ILE MET MET ASN LYS GLN SEQRES 25 A 348 PHE ARG ASN CYS MET VAL THR THR LEU CYS CYS GLY LYS SEQRES 26 A 348 ASN PRO LEU GLY ASP ASP GLU ALA SER THR THR VAL SER SEQRES 27 A 348 LYS THR GLU THR SER GLN VAL ALA PRO ALA SEQRES 1 C 11 VAL LEU GLU ASP LEU LYS SER CYS GLY LEU PHE HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET BMA B 4 11 HET NAG D 1 14 HET NAG D 2 14 HET BNG A 407 21 HET BNG A 410 21 HET PLM A1322 7 HET PLM A1323 17 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM BNG NONYL BETA-D-GLUCOPYRANOSIDE HETNAM PLM PALMITIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN BNG BETA-NONYLGLUCOSIDE; NONYL BETA-D-GLUCOSIDE; NONYL D- HETSYN 2 BNG GLUCOSIDE; NONYL GLUCOSIDE FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 3 BMA 2(C6 H12 O6) FORMUL 5 BNG 2(C15 H30 O6) FORMUL 7 PLM 2(C16 H32 O2) FORMUL 9 HOH *65(H2 O) HELIX 1 AA1 GLU A 33 HIS A 65 1 33 HELIX 2 AA2 LYS A 66 ARG A 69 5 4 HELIX 3 AA3 THR A 70 LEU A 72 5 3 HELIX 4 AA4 ASN A 73 GLY A 90 1 18 HELIX 5 AA5 GLY A 90 LEU A 99 1 10 HELIX 6 AA6 PHE A 105 LYS A 141 1 37 HELIX 7 AA7 GLY A 149 ALA A 169 1 21 HELIX 8 AA8 PRO A 170 VAL A 173 5 4 HELIX 9 AA9 HIS A 195 THR A 198 5 4 HELIX 10 AB1 ASN A 199 HIS A 211 1 13 HELIX 11 AB2 PHE A 212 GLN A 236 1 25 HELIX 12 AB3 SER A 240 HIS A 278 1 39 HELIX 13 AB4 GLY A 284 THR A 297 1 14 HELIX 14 AB5 THR A 297 ILE A 307 1 11 HELIX 15 AB6 ASN A 310 CYS A 322 1 13 HELIX 16 AB7 LEU C 341 CYS C 347 1 7 SHEET 1 AA1 2 THR A 4 GLY A 6 0 SHEET 2 AA1 2 PHE A 9 VAL A 11 -1 O VAL A 11 N THR A 4 SHEET 1 AA2 2 TYR A 178 GLU A 181 0 SHEET 2 AA2 2 SER A 186 ILE A 189 -1 O SER A 186 N GLU A 181 SSBOND 1 CYS A 110 CYS A 187 1555 1555 2.04 LINK ND2 ASN A 2 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 15 C1 NAG B 1 1555 1555 1.44 LINK SG CYS A 322 C1 PLM A1322 1555 1555 1.77 LINK SG CYS A 323 C1 PLM A1323 1555 1555 1.77 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.46 LINK O2 BMA B 3 C1 BMA B 4 1555 1555 1.47 LINK O3 NAG D 1 C1 NAG D 2 1555 1555 1.44 CRYST1 242.136 242.136 109.721 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004130 0.002384 0.000000 0.00000 SCALE2 0.000000 0.004769 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009114 0.00000