data_4X2Z # _entry.id 4X2Z # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4X2Z WWPDB D_1000204976 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4X2Z _pdbx_database_status.recvd_initial_deposition_date 2014-11-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kong, L.' 1 'Shaw, N.' 2 'Yan, L.' 3 'Lou, Z.' 4 'Rao, Z.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Biol.Chem. _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 290 _citation.language ? _citation.page_first 7160 _citation.page_last 7168 _citation.title 'Structural View and Substrate Specificity of Papain-like Protease from Avian Infectious Bronchitis Virus.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.M114.628636 _citation.pdbx_database_id_PubMed 25609249 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kong, L.' 1 primary 'Shaw, N.' 2 primary 'Yan, L.' 3 primary 'Lou, Z.' 4 primary 'Rao, Z.' 5 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 4X2Z _cell.details ? _cell.formula_units_Z ? _cell.length_a 71.312 _cell.length_a_esd ? _cell.length_b 95.123 _cell.length_b_esd ? _cell.length_c 118.358 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4X2Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nonstructural protein 3' 36053.652 1 3.4.22.- ? 'UNP RESIDUES 1174-1483' ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 water nat water 18.015 128 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'papain-like proteinase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GPLGSTCKQKTIYLTEDGVKYRSIVLKPGDSLGQFGQVYAKNKIVFTADDVEDKEILYVPTTDKSILEYYGLDAQKYVIY LQTLAQKWNVQYRDNFLILEWRDGNCWISSAIVLLQAAKIRFKGFLTEAWAKLLGGDPTDFVAWCYASCTAKVGDFSDAN WLLANLAEHFDADYTNAFLKKRVSCNCGIKSYELRGLEACIQPVRATNLLHFKTQYSNCPTCGANNTDEVIEASLPYLLL FATDGPATVDCDEDAVGTVVFVGSTNSGHCYTQAAGQAFDNLAKDRKFGKKSPYITA(MSE)YTRFAFKNETSLPVAKQL ERPHRD ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSTCKQKTIYLTEDGVKYRSIVLKPGDSLGQFGQVYAKNKIVFTADDVEDKEILYVPTTDKSILEYYGLDAQKYVIY LQTLAQKWNVQYRDNFLILEWRDGNCWISSAIVLLQAAKIRFKGFLTEAWAKLLGGDPTDFVAWCYASCTAKVGDFSDAN WLLANLAEHFDADYTNAFLKKRVSCNCGIKSYELRGLEACIQPVRATNLLHFKTQYSNCPTCGANNTDEVIEASLPYLLL FATDGPATVDCDEDAVGTVVFVGSTNSGHCYTQAAGQAFDNLAKDRKFGKKSPYITAMYTRFAFKNETSLPVAKQLERPH RD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 THR n 1 7 CYS n 1 8 LYS n 1 9 GLN n 1 10 LYS n 1 11 THR n 1 12 ILE n 1 13 TYR n 1 14 LEU n 1 15 THR n 1 16 GLU n 1 17 ASP n 1 18 GLY n 1 19 VAL n 1 20 LYS n 1 21 TYR n 1 22 ARG n 1 23 SER n 1 24 ILE n 1 25 VAL n 1 26 LEU n 1 27 LYS n 1 28 PRO n 1 29 GLY n 1 30 ASP n 1 31 SER n 1 32 LEU n 1 33 GLY n 1 34 GLN n 1 35 PHE n 1 36 GLY n 1 37 GLN n 1 38 VAL n 1 39 TYR n 1 40 ALA n 1 41 LYS n 1 42 ASN n 1 43 LYS n 1 44 ILE n 1 45 VAL n 1 46 PHE n 1 47 THR n 1 48 ALA n 1 49 ASP n 1 50 ASP n 1 51 VAL n 1 52 GLU n 1 53 ASP n 1 54 LYS n 1 55 GLU n 1 56 ILE n 1 57 LEU n 1 58 TYR n 1 59 VAL n 1 60 PRO n 1 61 THR n 1 62 THR n 1 63 ASP n 1 64 LYS n 1 65 SER n 1 66 ILE n 1 67 LEU n 1 68 GLU n 1 69 TYR n 1 70 TYR n 1 71 GLY n 1 72 LEU n 1 73 ASP n 1 74 ALA n 1 75 GLN n 1 76 LYS n 1 77 TYR n 1 78 VAL n 1 79 ILE n 1 80 TYR n 1 81 LEU n 1 82 GLN n 1 83 THR n 1 84 LEU n 1 85 ALA n 1 86 GLN n 1 87 LYS n 1 88 TRP n 1 89 ASN n 1 90 VAL n 1 91 GLN n 1 92 TYR n 1 93 ARG n 1 94 ASP n 1 95 ASN n 1 96 PHE n 1 97 LEU n 1 98 ILE n 1 99 LEU n 1 100 GLU n 1 101 TRP n 1 102 ARG n 1 103 ASP n 1 104 GLY n 1 105 ASN n 1 106 CYS n 1 107 TRP n 1 108 ILE n 1 109 SER n 1 110 SER n 1 111 ALA n 1 112 ILE n 1 113 VAL n 1 114 LEU n 1 115 LEU n 1 116 GLN n 1 117 ALA n 1 118 ALA n 1 119 LYS n 1 120 ILE n 1 121 ARG n 1 122 PHE n 1 123 LYS n 1 124 GLY n 1 125 PHE n 1 126 LEU n 1 127 THR n 1 128 GLU n 1 129 ALA n 1 130 TRP n 1 131 ALA n 1 132 LYS n 1 133 LEU n 1 134 LEU n 1 135 GLY n 1 136 GLY n 1 137 ASP n 1 138 PRO n 1 139 THR n 1 140 ASP n 1 141 PHE n 1 142 VAL n 1 143 ALA n 1 144 TRP n 1 145 CYS n 1 146 TYR n 1 147 ALA n 1 148 SER n 1 149 CYS n 1 150 THR n 1 151 ALA n 1 152 LYS n 1 153 VAL n 1 154 GLY n 1 155 ASP n 1 156 PHE n 1 157 SER n 1 158 ASP n 1 159 ALA n 1 160 ASN n 1 161 TRP n 1 162 LEU n 1 163 LEU n 1 164 ALA n 1 165 ASN n 1 166 LEU n 1 167 ALA n 1 168 GLU n 1 169 HIS n 1 170 PHE n 1 171 ASP n 1 172 ALA n 1 173 ASP n 1 174 TYR n 1 175 THR n 1 176 ASN n 1 177 ALA n 1 178 PHE n 1 179 LEU n 1 180 LYS n 1 181 LYS n 1 182 ARG n 1 183 VAL n 1 184 SER n 1 185 CYS n 1 186 ASN n 1 187 CYS n 1 188 GLY n 1 189 ILE n 1 190 LYS n 1 191 SER n 1 192 TYR n 1 193 GLU n 1 194 LEU n 1 195 ARG n 1 196 GLY n 1 197 LEU n 1 198 GLU n 1 199 ALA n 1 200 CYS n 1 201 ILE n 1 202 GLN n 1 203 PRO n 1 204 VAL n 1 205 ARG n 1 206 ALA n 1 207 THR n 1 208 ASN n 1 209 LEU n 1 210 LEU n 1 211 HIS n 1 212 PHE n 1 213 LYS n 1 214 THR n 1 215 GLN n 1 216 TYR n 1 217 SER n 1 218 ASN n 1 219 CYS n 1 220 PRO n 1 221 THR n 1 222 CYS n 1 223 GLY n 1 224 ALA n 1 225 ASN n 1 226 ASN n 1 227 THR n 1 228 ASP n 1 229 GLU n 1 230 VAL n 1 231 ILE n 1 232 GLU n 1 233 ALA n 1 234 SER n 1 235 LEU n 1 236 PRO n 1 237 TYR n 1 238 LEU n 1 239 LEU n 1 240 LEU n 1 241 PHE n 1 242 ALA n 1 243 THR n 1 244 ASP n 1 245 GLY n 1 246 PRO n 1 247 ALA n 1 248 THR n 1 249 VAL n 1 250 ASP n 1 251 CYS n 1 252 ASP n 1 253 GLU n 1 254 ASP n 1 255 ALA n 1 256 VAL n 1 257 GLY n 1 258 THR n 1 259 VAL n 1 260 VAL n 1 261 PHE n 1 262 VAL n 1 263 GLY n 1 264 SER n 1 265 THR n 1 266 ASN n 1 267 SER n 1 268 GLY n 1 269 HIS n 1 270 CYS n 1 271 TYR n 1 272 THR n 1 273 GLN n 1 274 ALA n 1 275 ALA n 1 276 GLY n 1 277 GLN n 1 278 ALA n 1 279 PHE n 1 280 ASP n 1 281 ASN n 1 282 LEU n 1 283 ALA n 1 284 LYS n 1 285 ASP n 1 286 ARG n 1 287 LYS n 1 288 PHE n 1 289 GLY n 1 290 LYS n 1 291 LYS n 1 292 SER n 1 293 PRO n 1 294 TYR n 1 295 ILE n 1 296 THR n 1 297 ALA n 1 298 MSE n 1 299 TYR n 1 300 THR n 1 301 ARG n 1 302 PHE n 1 303 ALA n 1 304 PHE n 1 305 LYS n 1 306 ASN n 1 307 GLU n 1 308 THR n 1 309 SER n 1 310 LEU n 1 311 PRO n 1 312 VAL n 1 313 ALA n 1 314 LYS n 1 315 GLN n 1 316 LEU n 1 317 GLU n 1 318 ARG n 1 319 PRO n 1 320 HIS n 1 321 ARG n 1 322 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 322 _entity_src_gen.gene_src_common_name IBV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'rep, 1a-1b' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain Beaudette _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Avian infectious bronchitis virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11122 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code R1AB_IBVB _struct_ref.pdbx_db_accession P0C6Y1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TCKQKTIYLTEDGVKYRSIVLKPGDSLGQFGQVYAKNKIVFTADDVEDKEILYVPTTDKSILEYYGLDAQKYVIYLQTLA QKWNVQYRDNFLILEWRDGNCWISSAIVLLQAAKIRFKGFLTEAWAKLLGGDPTDFVAWCYASCTAKVGDFSDANWLLAN LAEHFDADYTNAFLKKRVSCNCGIKSYELRGLEACIQPVRATNLLHFKTQYSNCPTCGANNTDEVIEASLPYLLLFATDG PATVDCDEDAVGTVVFVGSTNSGHCYTQAAGQAFDNLAKDRKFGKKSPYITAMYTRFAFKNETSLPVAKQ ; _struct_ref.pdbx_align_begin 1174 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4X2Z _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 315 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0C6Y1 _struct_ref_seq.db_align_beg 1174 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1483 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 310 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4X2Z GLY A 1 ? UNP P0C6Y1 ? ? 'expression tag' -4 1 1 4X2Z PRO A 2 ? UNP P0C6Y1 ? ? 'expression tag' -3 2 1 4X2Z LEU A 3 ? UNP P0C6Y1 ? ? 'expression tag' -2 3 1 4X2Z GLY A 4 ? UNP P0C6Y1 ? ? 'expression tag' -1 4 1 4X2Z SER A 5 ? UNP P0C6Y1 ? ? 'expression tag' 0 5 1 4X2Z LEU A 316 ? UNP P0C6Y1 ? ? 'expression tag' 311 6 1 4X2Z GLU A 317 ? UNP P0C6Y1 ? ? 'expression tag' 312 7 1 4X2Z ARG A 318 ? UNP P0C6Y1 ? ? 'expression tag' 313 8 1 4X2Z PRO A 319 ? UNP P0C6Y1 ? ? 'expression tag' 314 9 1 4X2Z HIS A 320 ? UNP P0C6Y1 ? ? 'expression tag' 315 10 1 4X2Z ARG A 321 ? UNP P0C6Y1 ? ? 'expression tag' 316 11 1 4X2Z ASP A 322 ? UNP P0C6Y1 ? ? 'expression tag' 317 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4X2Z _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.95 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 58.36 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M BIS-TRIS (pH 6.0), 18% Polyethylene glycol monomethyl ether 5000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-10-09 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.987 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.987 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4X2Z _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.00 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 27773 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 26 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.75 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 12.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4X2Z _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.150 _refine.ls_d_res_low 37.072 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 22247 _refine.ls_number_reflns_R_free 1124 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.95 _refine.ls_percent_reflns_R_free 5.05 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1771 _refine.ls_R_factor_R_free 0.2156 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1750 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.30 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.22 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2375 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 128 _refine_hist.number_atoms_total 2504 _refine_hist.d_res_high 2.150 _refine_hist.d_res_low 37.072 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 2430 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.027 ? 3300 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 13.801 ? 860 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.041 ? 365 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 421 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.1500 2.2479 . . 126 2576 100.00 . . . 0.2650 . 0.1992 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2479 2.3663 . . 117 2635 100.00 . . . 0.2459 . 0.1940 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3663 2.5146 . . 132 2614 100.00 . . . 0.2667 . 0.2054 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5146 2.7087 . . 150 2621 100.00 . . . 0.2837 . 0.2034 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7087 2.9811 . . 166 2620 100.00 . . . 0.2558 . 0.2102 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9811 3.4123 . . 136 2616 100.00 . . . 0.2264 . 0.2006 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4123 4.2981 . . 152 2659 100.00 . . . 0.1898 . 0.1526 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.2981 37.0780 . . 145 2782 100.00 . . . 0.1719 . 0.1433 . . . . . . . . . . # _struct.entry_id 4X2Z _struct.title 'Structural view and substrate specificity of papain-like protease from Avian Infectious Bronchitis Virus' _struct.pdbx_descriptor 'papain-like proteinase' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4X2Z _struct_keywords.text 'PLpro, de-ubiquitination, IBV, Coronavirus, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 31 ? GLY A 36 ? SER A 26 GLY A 31 5 ? 6 HELX_P HELX_P2 AA2 THR A 47 ? VAL A 51 ? THR A 42 VAL A 46 5 ? 5 HELX_P HELX_P3 AA3 ASP A 63 ? GLY A 71 ? ASP A 58 GLY A 66 1 ? 9 HELX_P HELX_P4 AA4 ASP A 73 ? LEU A 84 ? ASP A 68 LEU A 79 1 ? 12 HELX_P HELX_P5 AA5 ASN A 105 ? ALA A 118 ? ASN A 100 ALA A 113 1 ? 14 HELX_P HELX_P6 AA6 GLY A 124 ? GLY A 135 ? GLY A 119 GLY A 130 1 ? 12 HELX_P HELX_P7 AA7 PRO A 138 ? CYS A 149 ? PRO A 133 CYS A 144 1 ? 12 HELX_P HELX_P8 AA8 ASP A 158 ? GLU A 168 ? ASP A 153 GLU A 163 1 ? 11 HELX_P HELX_P9 AA9 GLY A 196 ? CYS A 200 ? GLY A 191 CYS A 195 1 ? 5 HELX_P HELX_P10 AB1 ASN A 208 ? LYS A 213 ? ASN A 203 LYS A 208 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A CYS 185 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 180 A ZN 400 1_555 ? ? ? ? ? ? ? 2.419 ? metalc2 metalc ? ? A CYS 187 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 182 A ZN 400 1_555 ? ? ? ? ? ? ? 2.280 ? metalc3 metalc ? ? A CYS 219 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 214 A ZN 400 1_555 ? ? ? ? ? ? ? 2.446 ? metalc4 metalc ? ? A CYS 222 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 217 A ZN 400 1_555 ? ? ? ? ? ? ? 2.287 ? covale1 covale both ? A ALA 297 C ? ? ? 1_555 A MSE 298 N ? ? A ALA 292 A MSE 293 1_555 ? ? ? ? ? ? ? 1.331 ? covale2 covale both ? A MSE 298 C ? ? ? 1_555 A TYR 299 N ? ? A MSE 293 A TYR 294 1_555 ? ? ? ? ? ? ? 1.329 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id THR _struct_mon_prot_cis.label_seq_id 308 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id THR _struct_mon_prot_cis.auth_seq_id 303 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 309 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 304 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.87 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 2 ? AA3 ? 7 ? AA4 ? 4 ? AA5 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA3 6 7 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 22 ? LEU A 26 ? ARG A 17 LEU A 21 AA1 2 LYS A 10 ? THR A 15 ? LYS A 5 THR A 10 AA1 3 ILE A 56 ? TYR A 58 ? ILE A 51 TYR A 53 AA2 1 VAL A 90 ? ARG A 93 ? VAL A 85 ARG A 88 AA2 2 PHE A 96 ? LEU A 99 ? PHE A 91 LEU A 94 AA3 1 GLN A 277 ? PHE A 279 ? GLN A 272 PHE A 274 AA3 2 GLY A 268 ? ALA A 274 ? GLY A 263 ALA A 269 AA3 3 GLY A 257 ? GLY A 263 ? GLY A 252 GLY A 258 AA3 4 LYS A 291 ? LYS A 305 ? LYS A 286 LYS A 300 AA3 5 ASN A 225 ? ALA A 242 ? ASN A 220 ALA A 237 AA3 6 PHE A 178 ? CYS A 185 ? PHE A 173 CYS A 180 AA3 7 GLY A 188 ? ARG A 195 ? GLY A 183 ARG A 190 AA4 1 ALA A 247 ? ASP A 250 ? ALA A 242 ASP A 245 AA4 2 LYS A 291 ? LYS A 305 ? LYS A 286 LYS A 300 AA4 3 ASN A 225 ? ALA A 242 ? ASN A 220 ALA A 237 AA4 4 ILE A 201 ? VAL A 204 ? ILE A 196 VAL A 199 AA5 1 THR A 214 ? ASN A 218 ? THR A 209 ASN A 213 AA5 2 ASN A 225 ? ALA A 242 ? ASN A 220 ALA A 237 AA5 3 PHE A 178 ? CYS A 185 ? PHE A 173 CYS A 180 AA5 4 GLY A 188 ? ARG A 195 ? GLY A 183 ARG A 190 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU A 26 ? O LEU A 21 N LYS A 10 ? N LYS A 5 AA1 2 3 N TYR A 13 ? N TYR A 8 O LEU A 57 ? O LEU A 52 AA2 1 2 N GLN A 91 ? N GLN A 86 O ILE A 98 ? O ILE A 93 AA3 1 2 O PHE A 279 ? O PHE A 274 N THR A 272 ? N THR A 267 AA3 2 3 O TYR A 271 ? O TYR A 266 N VAL A 260 ? N VAL A 255 AA3 3 4 N GLY A 257 ? N GLY A 252 O MSE A 298 ? O MSE A 293 AA3 4 5 O PHE A 302 ? O PHE A 297 N LEU A 235 ? N LEU A 230 AA3 5 6 O GLU A 232 ? O GLU A 227 N LYS A 180 ? N LYS A 175 AA3 6 7 N VAL A 183 ? N VAL A 178 O LYS A 190 ? O LYS A 185 AA4 1 2 N ALA A 247 ? N ALA A 242 O TYR A 294 ? O TYR A 289 AA4 2 3 O PHE A 302 ? O PHE A 297 N LEU A 235 ? N LEU A 230 AA4 3 4 O LEU A 239 ? O LEU A 234 N GLN A 202 ? N GLN A 197 AA5 1 2 N GLN A 215 ? N GLN A 210 O ASP A 228 ? O ASP A 223 AA5 2 3 O GLU A 232 ? O GLU A 227 N LYS A 180 ? N LYS A 175 AA5 3 4 N VAL A 183 ? N VAL A 178 O LYS A 190 ? O LYS A 185 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id ZN _struct_site.pdbx_auth_seq_id 400 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'binding site for residue ZN A 400' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 185 ? CYS A 180 . ? 1_555 ? 2 AC1 4 CYS A 187 ? CYS A 182 . ? 1_555 ? 3 AC1 4 CYS A 219 ? CYS A 214 . ? 1_555 ? 4 AC1 4 CYS A 222 ? CYS A 217 . ? 1_555 ? # _atom_sites.entry_id 4X2Z _atom_sites.fract_transf_matrix[1][1] 0.014023 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010513 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008449 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -4 ? ? ? A . n A 1 2 PRO 2 -3 ? ? ? A . n A 1 3 LEU 3 -2 ? ? ? A . n A 1 4 GLY 4 -1 ? ? ? A . n A 1 5 SER 5 0 ? ? ? A . n A 1 6 THR 6 1 ? ? ? A . n A 1 7 CYS 7 2 ? ? ? A . n A 1 8 LYS 8 3 ? ? ? A . n A 1 9 GLN 9 4 4 GLN GLN A . n A 1 10 LYS 10 5 5 LYS LYS A . n A 1 11 THR 11 6 6 THR THR A . n A 1 12 ILE 12 7 7 ILE ILE A . n A 1 13 TYR 13 8 8 TYR TYR A . n A 1 14 LEU 14 9 9 LEU LEU A . n A 1 15 THR 15 10 10 THR THR A . n A 1 16 GLU 16 11 11 GLU GLU A . n A 1 17 ASP 17 12 12 ASP ASP A . n A 1 18 GLY 18 13 13 GLY GLY A . n A 1 19 VAL 19 14 14 VAL VAL A . n A 1 20 LYS 20 15 15 LYS LYS A . n A 1 21 TYR 21 16 16 TYR TYR A . n A 1 22 ARG 22 17 17 ARG ARG A . n A 1 23 SER 23 18 18 SER SER A . n A 1 24 ILE 24 19 19 ILE ILE A . n A 1 25 VAL 25 20 20 VAL VAL A . n A 1 26 LEU 26 21 21 LEU LEU A . n A 1 27 LYS 27 22 22 LYS LYS A . n A 1 28 PRO 28 23 23 PRO PRO A . n A 1 29 GLY 29 24 24 GLY GLY A . n A 1 30 ASP 30 25 25 ASP ASP A . n A 1 31 SER 31 26 26 SER SER A . n A 1 32 LEU 32 27 27 LEU LEU A . n A 1 33 GLY 33 28 28 GLY GLY A . n A 1 34 GLN 34 29 29 GLN GLN A . n A 1 35 PHE 35 30 30 PHE PHE A . n A 1 36 GLY 36 31 31 GLY GLY A . n A 1 37 GLN 37 32 32 GLN GLN A . n A 1 38 VAL 38 33 33 VAL VAL A . n A 1 39 TYR 39 34 34 TYR TYR A . n A 1 40 ALA 40 35 35 ALA ALA A . n A 1 41 LYS 41 36 36 LYS LYS A . n A 1 42 ASN 42 37 37 ASN ASN A . n A 1 43 LYS 43 38 38 LYS LYS A . n A 1 44 ILE 44 39 39 ILE ILE A . n A 1 45 VAL 45 40 40 VAL VAL A . n A 1 46 PHE 46 41 41 PHE PHE A . n A 1 47 THR 47 42 42 THR THR A . n A 1 48 ALA 48 43 43 ALA ALA A . n A 1 49 ASP 49 44 44 ASP ASP A . n A 1 50 ASP 50 45 45 ASP ASP A . n A 1 51 VAL 51 46 46 VAL VAL A . n A 1 52 GLU 52 47 47 GLU GLU A . n A 1 53 ASP 53 48 48 ASP ASP A . n A 1 54 LYS 54 49 49 LYS LYS A . n A 1 55 GLU 55 50 50 GLU GLU A . n A 1 56 ILE 56 51 51 ILE ILE A . n A 1 57 LEU 57 52 52 LEU LEU A . n A 1 58 TYR 58 53 53 TYR TYR A . n A 1 59 VAL 59 54 54 VAL VAL A . n A 1 60 PRO 60 55 55 PRO PRO A . n A 1 61 THR 61 56 56 THR THR A . n A 1 62 THR 62 57 57 THR THR A . n A 1 63 ASP 63 58 58 ASP ASP A . n A 1 64 LYS 64 59 59 LYS LYS A . n A 1 65 SER 65 60 60 SER SER A . n A 1 66 ILE 66 61 61 ILE ILE A . n A 1 67 LEU 67 62 62 LEU LEU A . n A 1 68 GLU 68 63 63 GLU GLU A . n A 1 69 TYR 69 64 64 TYR TYR A . n A 1 70 TYR 70 65 65 TYR TYR A . n A 1 71 GLY 71 66 66 GLY GLY A . n A 1 72 LEU 72 67 67 LEU LEU A . n A 1 73 ASP 73 68 68 ASP ASP A . n A 1 74 ALA 74 69 69 ALA ALA A . n A 1 75 GLN 75 70 70 GLN GLN A . n A 1 76 LYS 76 71 71 LYS LYS A . n A 1 77 TYR 77 72 72 TYR TYR A . n A 1 78 VAL 78 73 73 VAL VAL A . n A 1 79 ILE 79 74 74 ILE ILE A . n A 1 80 TYR 80 75 75 TYR TYR A . n A 1 81 LEU 81 76 76 LEU LEU A . n A 1 82 GLN 82 77 77 GLN GLN A . n A 1 83 THR 83 78 78 THR THR A . n A 1 84 LEU 84 79 79 LEU LEU A . n A 1 85 ALA 85 80 80 ALA ALA A . n A 1 86 GLN 86 81 81 GLN GLN A . n A 1 87 LYS 87 82 82 LYS LYS A . n A 1 88 TRP 88 83 83 TRP TRP A . n A 1 89 ASN 89 84 84 ASN ASN A . n A 1 90 VAL 90 85 85 VAL VAL A . n A 1 91 GLN 91 86 86 GLN GLN A . n A 1 92 TYR 92 87 87 TYR TYR A . n A 1 93 ARG 93 88 88 ARG ARG A . n A 1 94 ASP 94 89 89 ASP ASP A . n A 1 95 ASN 95 90 90 ASN ASN A . n A 1 96 PHE 96 91 91 PHE PHE A . n A 1 97 LEU 97 92 92 LEU LEU A . n A 1 98 ILE 98 93 93 ILE ILE A . n A 1 99 LEU 99 94 94 LEU LEU A . n A 1 100 GLU 100 95 95 GLU GLU A . n A 1 101 TRP 101 96 96 TRP TRP A . n A 1 102 ARG 102 97 97 ARG ARG A . n A 1 103 ASP 103 98 98 ASP ASP A . n A 1 104 GLY 104 99 99 GLY GLY A . n A 1 105 ASN 105 100 100 ASN ASN A . n A 1 106 CYS 106 101 101 CYS CYS A . n A 1 107 TRP 107 102 102 TRP TRP A . n A 1 108 ILE 108 103 103 ILE ILE A . n A 1 109 SER 109 104 104 SER SER A . n A 1 110 SER 110 105 105 SER SER A . n A 1 111 ALA 111 106 106 ALA ALA A . n A 1 112 ILE 112 107 107 ILE ILE A . n A 1 113 VAL 113 108 108 VAL VAL A . n A 1 114 LEU 114 109 109 LEU LEU A . n A 1 115 LEU 115 110 110 LEU LEU A . n A 1 116 GLN 116 111 111 GLN GLN A . n A 1 117 ALA 117 112 112 ALA ALA A . n A 1 118 ALA 118 113 113 ALA ALA A . n A 1 119 LYS 119 114 114 LYS LYS A . n A 1 120 ILE 120 115 115 ILE ILE A . n A 1 121 ARG 121 116 116 ARG ARG A . n A 1 122 PHE 122 117 117 PHE PHE A . n A 1 123 LYS 123 118 118 LYS LYS A . n A 1 124 GLY 124 119 119 GLY GLY A . n A 1 125 PHE 125 120 120 PHE PHE A . n A 1 126 LEU 126 121 121 LEU LEU A . n A 1 127 THR 127 122 122 THR THR A . n A 1 128 GLU 128 123 123 GLU GLU A . n A 1 129 ALA 129 124 124 ALA ALA A . n A 1 130 TRP 130 125 125 TRP TRP A . n A 1 131 ALA 131 126 126 ALA ALA A . n A 1 132 LYS 132 127 127 LYS LYS A . n A 1 133 LEU 133 128 128 LEU LEU A . n A 1 134 LEU 134 129 129 LEU LEU A . n A 1 135 GLY 135 130 130 GLY GLY A . n A 1 136 GLY 136 131 131 GLY GLY A . n A 1 137 ASP 137 132 132 ASP ASP A . n A 1 138 PRO 138 133 133 PRO PRO A . n A 1 139 THR 139 134 134 THR THR A . n A 1 140 ASP 140 135 135 ASP ASP A . n A 1 141 PHE 141 136 136 PHE PHE A . n A 1 142 VAL 142 137 137 VAL VAL A . n A 1 143 ALA 143 138 138 ALA ALA A . n A 1 144 TRP 144 139 139 TRP TRP A . n A 1 145 CYS 145 140 140 CYS CYS A . n A 1 146 TYR 146 141 141 TYR TYR A . n A 1 147 ALA 147 142 142 ALA ALA A . n A 1 148 SER 148 143 143 SER SER A . n A 1 149 CYS 149 144 144 CYS CYS A . n A 1 150 THR 150 145 145 THR THR A . n A 1 151 ALA 151 146 146 ALA ALA A . n A 1 152 LYS 152 147 147 LYS LYS A . n A 1 153 VAL 153 148 148 VAL VAL A . n A 1 154 GLY 154 149 149 GLY GLY A . n A 1 155 ASP 155 150 150 ASP ASP A . n A 1 156 PHE 156 151 151 PHE PHE A . n A 1 157 SER 157 152 152 SER SER A . n A 1 158 ASP 158 153 153 ASP ASP A . n A 1 159 ALA 159 154 154 ALA ALA A . n A 1 160 ASN 160 155 155 ASN ASN A . n A 1 161 TRP 161 156 156 TRP TRP A . n A 1 162 LEU 162 157 157 LEU LEU A . n A 1 163 LEU 163 158 158 LEU LEU A . n A 1 164 ALA 164 159 159 ALA ALA A . n A 1 165 ASN 165 160 160 ASN ASN A . n A 1 166 LEU 166 161 161 LEU LEU A . n A 1 167 ALA 167 162 162 ALA ALA A . n A 1 168 GLU 168 163 163 GLU GLU A . n A 1 169 HIS 169 164 164 HIS HIS A . n A 1 170 PHE 170 165 165 PHE PHE A . n A 1 171 ASP 171 166 166 ASP ASP A . n A 1 172 ALA 172 167 167 ALA ALA A . n A 1 173 ASP 173 168 168 ASP ASP A . n A 1 174 TYR 174 169 169 TYR TYR A . n A 1 175 THR 175 170 170 THR THR A . n A 1 176 ASN 176 171 171 ASN ASN A . n A 1 177 ALA 177 172 172 ALA ALA A . n A 1 178 PHE 178 173 173 PHE PHE A . n A 1 179 LEU 179 174 174 LEU LEU A . n A 1 180 LYS 180 175 175 LYS LYS A . n A 1 181 LYS 181 176 176 LYS LYS A . n A 1 182 ARG 182 177 177 ARG ARG A . n A 1 183 VAL 183 178 178 VAL VAL A . n A 1 184 SER 184 179 179 SER SER A . n A 1 185 CYS 185 180 180 CYS CYS A . n A 1 186 ASN 186 181 181 ASN ASN A . n A 1 187 CYS 187 182 182 CYS CYS A . n A 1 188 GLY 188 183 183 GLY GLY A . n A 1 189 ILE 189 184 184 ILE ILE A . n A 1 190 LYS 190 185 185 LYS LYS A . n A 1 191 SER 191 186 186 SER SER A . n A 1 192 TYR 192 187 187 TYR TYR A . n A 1 193 GLU 193 188 188 GLU GLU A . n A 1 194 LEU 194 189 189 LEU LEU A . n A 1 195 ARG 195 190 190 ARG ARG A . n A 1 196 GLY 196 191 191 GLY GLY A . n A 1 197 LEU 197 192 192 LEU LEU A . n A 1 198 GLU 198 193 193 GLU GLU A . n A 1 199 ALA 199 194 194 ALA ALA A . n A 1 200 CYS 200 195 195 CYS CYS A . n A 1 201 ILE 201 196 196 ILE ILE A . n A 1 202 GLN 202 197 197 GLN GLN A . n A 1 203 PRO 203 198 198 PRO PRO A . n A 1 204 VAL 204 199 199 VAL VAL A . n A 1 205 ARG 205 200 200 ARG ARG A . n A 1 206 ALA 206 201 201 ALA ALA A . n A 1 207 THR 207 202 202 THR THR A . n A 1 208 ASN 208 203 203 ASN ASN A . n A 1 209 LEU 209 204 204 LEU LEU A . n A 1 210 LEU 210 205 205 LEU LEU A . n A 1 211 HIS 211 206 206 HIS HIS A . n A 1 212 PHE 212 207 207 PHE PHE A . n A 1 213 LYS 213 208 208 LYS LYS A . n A 1 214 THR 214 209 209 THR THR A . n A 1 215 GLN 215 210 210 GLN GLN A . n A 1 216 TYR 216 211 211 TYR TYR A . n A 1 217 SER 217 212 212 SER SER A . n A 1 218 ASN 218 213 213 ASN ASN A . n A 1 219 CYS 219 214 214 CYS CYS A . n A 1 220 PRO 220 215 215 PRO PRO A . n A 1 221 THR 221 216 216 THR THR A . n A 1 222 CYS 222 217 217 CYS CYS A . n A 1 223 GLY 223 218 218 GLY GLY A . n A 1 224 ALA 224 219 219 ALA ALA A . n A 1 225 ASN 225 220 220 ASN ASN A . n A 1 226 ASN 226 221 221 ASN ASN A . n A 1 227 THR 227 222 222 THR THR A . n A 1 228 ASP 228 223 223 ASP ASP A . n A 1 229 GLU 229 224 224 GLU GLU A . n A 1 230 VAL 230 225 225 VAL VAL A . n A 1 231 ILE 231 226 226 ILE ILE A . n A 1 232 GLU 232 227 227 GLU GLU A . n A 1 233 ALA 233 228 228 ALA ALA A . n A 1 234 SER 234 229 229 SER SER A . n A 1 235 LEU 235 230 230 LEU LEU A . n A 1 236 PRO 236 231 231 PRO PRO A . n A 1 237 TYR 237 232 232 TYR TYR A . n A 1 238 LEU 238 233 233 LEU LEU A . n A 1 239 LEU 239 234 234 LEU LEU A . n A 1 240 LEU 240 235 235 LEU LEU A . n A 1 241 PHE 241 236 236 PHE PHE A . n A 1 242 ALA 242 237 237 ALA ALA A . n A 1 243 THR 243 238 238 THR THR A . n A 1 244 ASP 244 239 239 ASP ASP A . n A 1 245 GLY 245 240 240 GLY GLY A . n A 1 246 PRO 246 241 241 PRO PRO A . n A 1 247 ALA 247 242 242 ALA ALA A . n A 1 248 THR 248 243 243 THR THR A . n A 1 249 VAL 249 244 244 VAL VAL A . n A 1 250 ASP 250 245 245 ASP ASP A . n A 1 251 CYS 251 246 246 CYS CYS A . n A 1 252 ASP 252 247 247 ASP ASP A . n A 1 253 GLU 253 248 248 GLU GLU A . n A 1 254 ASP 254 249 249 ASP ASP A . n A 1 255 ALA 255 250 250 ALA ALA A . n A 1 256 VAL 256 251 251 VAL VAL A . n A 1 257 GLY 257 252 252 GLY GLY A . n A 1 258 THR 258 253 253 THR THR A . n A 1 259 VAL 259 254 254 VAL VAL A . n A 1 260 VAL 260 255 255 VAL VAL A . n A 1 261 PHE 261 256 256 PHE PHE A . n A 1 262 VAL 262 257 257 VAL VAL A . n A 1 263 GLY 263 258 258 GLY GLY A . n A 1 264 SER 264 259 259 SER SER A . n A 1 265 THR 265 260 260 THR THR A . n A 1 266 ASN 266 261 261 ASN ASN A . n A 1 267 SER 267 262 262 SER SER A . n A 1 268 GLY 268 263 263 GLY GLY A . n A 1 269 HIS 269 264 264 HIS HIS A . n A 1 270 CYS 270 265 265 CYS CYS A . n A 1 271 TYR 271 266 266 TYR TYR A . n A 1 272 THR 272 267 267 THR THR A . n A 1 273 GLN 273 268 268 GLN GLN A . n A 1 274 ALA 274 269 269 ALA ALA A . n A 1 275 ALA 275 270 270 ALA ALA A . n A 1 276 GLY 276 271 271 GLY GLY A . n A 1 277 GLN 277 272 272 GLN GLN A . n A 1 278 ALA 278 273 273 ALA ALA A . n A 1 279 PHE 279 274 274 PHE PHE A . n A 1 280 ASP 280 275 275 ASP ASP A . n A 1 281 ASN 281 276 276 ASN ASN A . n A 1 282 LEU 282 277 277 LEU LEU A . n A 1 283 ALA 283 278 278 ALA ALA A . n A 1 284 LYS 284 279 279 LYS LYS A . n A 1 285 ASP 285 280 280 ASP ASP A . n A 1 286 ARG 286 281 281 ARG ARG A . n A 1 287 LYS 287 282 282 LYS LYS A . n A 1 288 PHE 288 283 283 PHE PHE A . n A 1 289 GLY 289 284 284 GLY GLY A . n A 1 290 LYS 290 285 285 LYS LYS A . n A 1 291 LYS 291 286 286 LYS LYS A . n A 1 292 SER 292 287 287 SER SER A . n A 1 293 PRO 293 288 288 PRO PRO A . n A 1 294 TYR 294 289 289 TYR TYR A . n A 1 295 ILE 295 290 290 ILE ILE A . n A 1 296 THR 296 291 291 THR THR A . n A 1 297 ALA 297 292 292 ALA ALA A . n A 1 298 MSE 298 293 293 MSE MSE A . n A 1 299 TYR 299 294 294 TYR TYR A . n A 1 300 THR 300 295 295 THR THR A . n A 1 301 ARG 301 296 296 ARG ARG A . n A 1 302 PHE 302 297 297 PHE PHE A . n A 1 303 ALA 303 298 298 ALA ALA A . n A 1 304 PHE 304 299 299 PHE PHE A . n A 1 305 LYS 305 300 300 LYS LYS A . n A 1 306 ASN 306 301 301 ASN ASN A . n A 1 307 GLU 307 302 302 GLU GLU A . n A 1 308 THR 308 303 303 THR THR A . n A 1 309 SER 309 304 304 SER SER A . n A 1 310 LEU 310 305 ? ? ? A . n A 1 311 PRO 311 306 ? ? ? A . n A 1 312 VAL 312 307 ? ? ? A . n A 1 313 ALA 313 308 ? ? ? A . n A 1 314 LYS 314 309 ? ? ? A . n A 1 315 GLN 315 310 ? ? ? A . n A 1 316 LEU 316 311 ? ? ? A . n A 1 317 GLU 317 312 ? ? ? A . n A 1 318 ARG 318 313 ? ? ? A . n A 1 319 PRO 319 314 ? ? ? A . n A 1 320 HIS 320 315 ? ? ? A . n A 1 321 ARG 321 316 ? ? ? A . n A 1 322 ASP 322 317 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 400 400 ZN ZN A . C 3 HOH 1 501 46 HOH HOH A . C 3 HOH 2 502 4 HOH HOH A . C 3 HOH 3 503 29 HOH HOH A . C 3 HOH 4 504 27 HOH HOH A . C 3 HOH 5 505 115 HOH HOH A . C 3 HOH 6 506 41 HOH HOH A . C 3 HOH 7 507 25 HOH HOH A . C 3 HOH 8 508 59 HOH HOH A . C 3 HOH 9 509 116 HOH HOH A . C 3 HOH 10 510 15 HOH HOH A . C 3 HOH 11 511 86 HOH HOH A . C 3 HOH 12 512 62 HOH HOH A . C 3 HOH 13 513 17 HOH HOH A . C 3 HOH 14 514 68 HOH HOH A . C 3 HOH 15 515 32 HOH HOH A . C 3 HOH 16 516 1 HOH HOH A . C 3 HOH 17 517 8 HOH HOH A . C 3 HOH 18 518 69 HOH HOH A . C 3 HOH 19 519 51 HOH HOH A . C 3 HOH 20 520 6 HOH HOH A . C 3 HOH 21 521 20 HOH HOH A . C 3 HOH 22 522 128 HOH HOH A . C 3 HOH 23 523 7 HOH HOH A . C 3 HOH 24 524 12 HOH HOH A . C 3 HOH 25 525 49 HOH HOH A . C 3 HOH 26 526 57 HOH HOH A . C 3 HOH 27 527 52 HOH HOH A . C 3 HOH 28 528 53 HOH HOH A . C 3 HOH 29 529 61 HOH HOH A . C 3 HOH 30 530 89 HOH HOH A . C 3 HOH 31 531 75 HOH HOH A . C 3 HOH 32 532 23 HOH HOH A . C 3 HOH 33 533 82 HOH HOH A . C 3 HOH 34 534 38 HOH HOH A . C 3 HOH 35 535 24 HOH HOH A . C 3 HOH 36 536 111 HOH HOH A . C 3 HOH 37 537 5 HOH HOH A . C 3 HOH 38 538 106 HOH HOH A . C 3 HOH 39 539 9 HOH HOH A . C 3 HOH 40 540 58 HOH HOH A . C 3 HOH 41 541 39 HOH HOH A . C 3 HOH 42 542 98 HOH HOH A . C 3 HOH 43 543 90 HOH HOH A . C 3 HOH 44 544 66 HOH HOH A . C 3 HOH 45 545 72 HOH HOH A . C 3 HOH 46 546 35 HOH HOH A . C 3 HOH 47 547 78 HOH HOH A . C 3 HOH 48 548 50 HOH HOH A . C 3 HOH 49 549 22 HOH HOH A . C 3 HOH 50 550 95 HOH HOH A . C 3 HOH 51 551 21 HOH HOH A . C 3 HOH 52 552 88 HOH HOH A . C 3 HOH 53 553 2 HOH HOH A . C 3 HOH 54 554 107 HOH HOH A . C 3 HOH 55 555 103 HOH HOH A . C 3 HOH 56 556 3 HOH HOH A . C 3 HOH 57 557 92 HOH HOH A . C 3 HOH 58 558 44 HOH HOH A . C 3 HOH 59 559 30 HOH HOH A . C 3 HOH 60 560 99 HOH HOH A . C 3 HOH 61 561 45 HOH HOH A . C 3 HOH 62 562 123 HOH HOH A . C 3 HOH 63 563 11 HOH HOH A . C 3 HOH 64 564 18 HOH HOH A . C 3 HOH 65 565 26 HOH HOH A . C 3 HOH 66 566 102 HOH HOH A . C 3 HOH 67 567 54 HOH HOH A . C 3 HOH 68 568 108 HOH HOH A . C 3 HOH 69 569 67 HOH HOH A . C 3 HOH 70 570 14 HOH HOH A . C 3 HOH 71 571 60 HOH HOH A . C 3 HOH 72 572 96 HOH HOH A . C 3 HOH 73 573 28 HOH HOH A . C 3 HOH 74 574 85 HOH HOH A . C 3 HOH 75 575 114 HOH HOH A . C 3 HOH 76 576 10 HOH HOH A . C 3 HOH 77 577 91 HOH HOH A . C 3 HOH 78 578 70 HOH HOH A . C 3 HOH 79 579 63 HOH HOH A . C 3 HOH 80 580 19 HOH HOH A . C 3 HOH 81 581 76 HOH HOH A . C 3 HOH 82 582 74 HOH HOH A . C 3 HOH 83 583 65 HOH HOH A . C 3 HOH 84 584 43 HOH HOH A . C 3 HOH 85 585 119 HOH HOH A . C 3 HOH 86 586 113 HOH HOH A . C 3 HOH 87 587 31 HOH HOH A . C 3 HOH 88 588 48 HOH HOH A . C 3 HOH 89 589 83 HOH HOH A . C 3 HOH 90 590 42 HOH HOH A . C 3 HOH 91 591 71 HOH HOH A . C 3 HOH 92 592 93 HOH HOH A . C 3 HOH 93 593 16 HOH HOH A . C 3 HOH 94 594 37 HOH HOH A . C 3 HOH 95 595 55 HOH HOH A . C 3 HOH 96 596 125 HOH HOH A . C 3 HOH 97 597 13 HOH HOH A . C 3 HOH 98 598 81 HOH HOH A . C 3 HOH 99 599 34 HOH HOH A . C 3 HOH 100 600 36 HOH HOH A . C 3 HOH 101 601 33 HOH HOH A . C 3 HOH 102 602 117 HOH HOH A . C 3 HOH 103 603 121 HOH HOH A . C 3 HOH 104 604 56 HOH HOH A . C 3 HOH 105 605 118 HOH HOH A . C 3 HOH 106 606 105 HOH HOH A . C 3 HOH 107 607 124 HOH HOH A . C 3 HOH 108 608 100 HOH HOH A . C 3 HOH 109 609 87 HOH HOH A . C 3 HOH 110 610 126 HOH HOH A . C 3 HOH 111 611 110 HOH HOH A . C 3 HOH 112 612 127 HOH HOH A . C 3 HOH 113 613 112 HOH HOH A . C 3 HOH 114 614 101 HOH HOH A . C 3 HOH 115 615 47 HOH HOH A . C 3 HOH 116 616 120 HOH HOH A . C 3 HOH 117 617 97 HOH HOH A . C 3 HOH 118 618 64 HOH HOH A . C 3 HOH 119 619 77 HOH HOH A . C 3 HOH 120 620 94 HOH HOH A . C 3 HOH 121 621 40 HOH HOH A . C 3 HOH 122 622 73 HOH HOH A . C 3 HOH 123 623 80 HOH HOH A . C 3 HOH 124 624 104 HOH HOH A . C 3 HOH 125 625 109 HOH HOH A . C 3 HOH 126 626 79 HOH HOH A . C 3 HOH 127 627 84 HOH HOH A . C 3 HOH 128 628 122 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 298 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 293 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 185 ? A CYS 180 ? 1_555 ZN ? B ZN . ? A ZN 400 ? 1_555 SG ? A CYS 187 ? A CYS 182 ? 1_555 108.0 ? 2 SG ? A CYS 185 ? A CYS 180 ? 1_555 ZN ? B ZN . ? A ZN 400 ? 1_555 SG ? A CYS 219 ? A CYS 214 ? 1_555 108.1 ? 3 SG ? A CYS 187 ? A CYS 182 ? 1_555 ZN ? B ZN . ? A ZN 400 ? 1_555 SG ? A CYS 219 ? A CYS 214 ? 1_555 108.9 ? 4 SG ? A CYS 185 ? A CYS 180 ? 1_555 ZN ? B ZN . ? A ZN 400 ? 1_555 SG ? A CYS 222 ? A CYS 217 ? 1_555 110.6 ? 5 SG ? A CYS 187 ? A CYS 182 ? 1_555 ZN ? B ZN . ? A ZN 400 ? 1_555 SG ? A CYS 222 ? A CYS 217 ? 1_555 115.7 ? 6 SG ? A CYS 219 ? A CYS 214 ? 1_555 ZN ? B ZN . ? A ZN 400 ? 1_555 SG ? A CYS 222 ? A CYS 217 ? 1_555 105.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-01-28 2 'Structure model' 1 1 2015-04-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Derived calculations' # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version '(phenix.refine: 1.9_1692)' _software.pdbx_ordinal 1 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A ASN 261 ? ? CA A ASN 261 ? ? C A ASN 261 ? ? 128.00 111.00 17.00 2.70 N 2 1 N A SER 262 ? ? CA A SER 262 ? ? CB A SER 262 ? ? 121.42 110.50 10.92 1.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 89 ? ? 50.41 -120.85 2 1 CYS A 180 ? ? -161.59 -163.50 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -4 ? A GLY 1 2 1 Y 1 A PRO -3 ? A PRO 2 3 1 Y 1 A LEU -2 ? A LEU 3 4 1 Y 1 A GLY -1 ? A GLY 4 5 1 Y 1 A SER 0 ? A SER 5 6 1 Y 1 A THR 1 ? A THR 6 7 1 Y 1 A CYS 2 ? A CYS 7 8 1 Y 1 A LYS 3 ? A LYS 8 9 1 Y 1 A LEU 305 ? A LEU 310 10 1 Y 1 A PRO 306 ? A PRO 311 11 1 Y 1 A VAL 307 ? A VAL 312 12 1 Y 1 A ALA 308 ? A ALA 313 13 1 Y 1 A LYS 309 ? A LYS 314 14 1 Y 1 A GLN 310 ? A GLN 315 15 1 Y 1 A LEU 311 ? A LEU 316 16 1 Y 1 A GLU 312 ? A GLU 317 17 1 Y 1 A ARG 313 ? A ARG 318 18 1 Y 1 A PRO 314 ? A PRO 319 19 1 Y 1 A HIS 315 ? A HIS 320 20 1 Y 1 A ARG 316 ? A ARG 321 21 1 Y 1 A ASP 317 ? A ASP 322 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Major Project (973 Program)' China '2014CB542800 and 2013CB911100' 1 'National Natural Science Foundation of China' China '81330036 and 81322023' 2 'Tsinghua University Initiative Scientific Research Program' China 20141080146 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 water HOH #