HEADER TRANSPORT PROTEIN 27-NOV-14 4X30 TITLE CRYSTAL STRUCTURE OF HUMAN THYROXINE-BINDING GLOBULIN COMPLEXED WITH TITLE 2 THYROINE AT 1.55 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: THYROXINE-BINDING GLOBULIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SERPIN A7,T4-BINDING GLOBULIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SERPINA7, TBG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSUMO3 KEYWDS TBG, THYROXINE-BINDING GLOBULIN, SERPIN, THYROXINE, CATION PI KEYWDS 2 INTERACTION, HORMONE RELEASE, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.QI REVDAT 4 15-NOV-23 4X30 1 ATOM REVDAT 3 08-NOV-23 4X30 1 REMARK REVDAT 2 18-OCT-17 4X30 1 JRNL REMARK REVDAT 1 02-DEC-15 4X30 0 JRNL AUTH X.QI,A.ZHOU JRNL TITL CRYSTAL STRUCTURE OF HUMAN THYROXINE-BINDING GLOBULIN JRNL TITL 2 COMPLEXED WITH THYROINE AT 1.55 ANGSTROM RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 60985 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3260 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4468 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.3210 REMARK 3 BIN FREE R VALUE SET COUNT : 272 REMARK 3 BIN FREE R VALUE : 0.3540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2935 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 365 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.53000 REMARK 3 B22 (A**2) : 0.53000 REMARK 3 B33 (A**2) : -1.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.078 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.077 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.054 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.058 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3148 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3023 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4277 ; 1.307 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6987 ; 0.713 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 396 ; 5.890 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 134 ;37.680 ;25.522 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 564 ;12.854 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;16.578 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 490 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3571 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 706 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1548 ; 0.972 ; 1.591 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1547 ; 0.967 ; 1.589 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1953 ; 1.636 ; 2.379 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1954 ; 1.637 ; 2.381 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1600 ; 1.310 ; 1.772 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1600 ; 1.308 ; 1.772 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2324 ; 2.114 ; 2.592 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3813 ; 5.271 ;14.203 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3814 ; 5.271 ;14.206 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 17 A 394 REMARK 3 ORIGIN FOR THE GROUP (A): -5.1688 21.6870 -25.3023 REMARK 3 T TENSOR REMARK 3 T11: 0.0255 T22: 0.0114 REMARK 3 T33: 0.0133 T12: -0.0004 REMARK 3 T13: -0.0102 T23: 0.0015 REMARK 3 L TENSOR REMARK 3 L11: 0.0767 L22: 0.3752 REMARK 3 L33: 0.7969 L12: -0.1165 REMARK 3 L13: 0.0948 L23: -0.4285 REMARK 3 S TENSOR REMARK 3 S11: 0.0095 S12: 0.0213 S13: 0.0036 REMARK 3 S21: 0.0449 S22: -0.0323 S23: -0.0425 REMARK 3 S31: -0.0720 S32: 0.0401 S33: 0.0228 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4X30 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000204958. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97930 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SCALA REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64376 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 34.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.73000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2CEO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, (NH4)2SO4, NACL, TRIS-HCL, PH REMARK 280 7.4, EVAPORATION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 101.35500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.73000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.73000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 152.03250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.73000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.73000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 50.67750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.73000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.73000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 152.03250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.73000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.73000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 50.67750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 101.35500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 600 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 622 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 SER A 2 REMARK 465 PRO A 3 REMARK 465 GLU A 4 REMARK 465 GLY A 5 REMARK 465 LYS A 6 REMARK 465 VAL A 7 REMARK 465 THR A 8 REMARK 465 ALA A 9 REMARK 465 CYS A 10 REMARK 465 HIS A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 465 GLN A 14 REMARK 465 PRO A 15 REMARK 465 ASN A 16 REMARK 465 SER A 353 REMARK 465 ASP A 354 REMARK 465 GLN A 355 REMARK 465 PRO A 356 REMARK 465 GLU A 357 REMARK 465 ASN A 358 REMARK 465 ALA A 395 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 47 116.55 -161.96 REMARK 500 CYS A 66 -140.38 58.14 REMARK 500 ASN A 244 -36.42 65.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 406 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 351 OE1 REMARK 620 2 HOH A 747 O 97.3 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue T44 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 406 DBREF 4X30 A 1 395 UNP P05543 THBG_HUMAN 21 415 SEQRES 1 A 395 ALA SER PRO GLU GLY LYS VAL THR ALA CYS HIS SER SER SEQRES 2 A 395 GLN PRO ASN ALA THR LEU TYR LYS MET SER SER ILE ASN SEQRES 3 A 395 ALA ASP PHE ALA PHE ASN LEU TYR ARG ARG PHE THR VAL SEQRES 4 A 395 GLU THR PRO ASP LYS ASN ILE PHE PHE SER PRO VAL SER SEQRES 5 A 395 ILE SER ALA ALA LEU VAL MET LEU SER PHE GLY ALA CYS SEQRES 6 A 395 CYS SER THR GLN THR GLU ILE VAL GLU THR LEU GLY PHE SEQRES 7 A 395 ASN LEU THR ASP THR PRO MET VAL GLU ILE GLN HIS GLY SEQRES 8 A 395 PHE GLN HIS LEU ILE CYS SER LEU ASN PHE PRO LYS LYS SEQRES 9 A 395 GLU LEU GLU LEU GLN ILE GLY ASN ALA LEU PHE ILE GLY SEQRES 10 A 395 LYS HIS LEU LYS PRO LEU ALA LYS PHE LEU ASN ASP VAL SEQRES 11 A 395 LYS THR LEU TYR GLU THR GLU VAL PHE SER THR ASP PHE SEQRES 12 A 395 SER ASN ILE SER ALA ALA LYS GLN GLU ILE ASN SER HIS SEQRES 13 A 395 VAL GLU MET GLN THR LYS GLY LYS VAL VAL GLY LEU ILE SEQRES 14 A 395 GLN ASP LEU LYS PRO ASN THR ILE MET VAL LEU VAL ASN SEQRES 15 A 395 TYR ILE HIS PHE LYS ALA GLN TRP ALA ASN PRO PHE ASP SEQRES 16 A 395 PRO SER LYS THR GLU ASP SER SER SER PHE LEU ILE ASP SEQRES 17 A 395 LYS THR THR THR VAL GLN VAL PRO MET MET HIS GLN MET SEQRES 18 A 395 GLU GLN TYR TYR HIS LEU VAL ASP MET GLU LEU ASN CYS SEQRES 19 A 395 THR VAL LEU GLN MET ASP TYR SER LYS ASN ALA LEU ALA SEQRES 20 A 395 LEU PHE VAL LEU PRO LYS GLU GLY GLN MET GLU SER VAL SEQRES 21 A 395 GLU ALA ALA MET SER SER LYS THR LEU LYS LYS TRP ASN SEQRES 22 A 395 ARG LEU LEU GLN LYS GLY TRP VAL ASP LEU PHE VAL PRO SEQRES 23 A 395 LYS PHE SER ILE SER ALA THR TYR ASP LEU GLY ALA THR SEQRES 24 A 395 LEU LEU LYS MET GLY ILE GLN HIS ALA TYR SER GLU ASN SEQRES 25 A 395 ALA ASP PHE SER GLY LEU THR GLU ASP ASN GLY LEU LYS SEQRES 26 A 395 LEU SER ASN ALA ALA HIS LYS ALA VAL LEU HIS ILE GLY SEQRES 27 A 395 GLU LYS GLY THR GLU ALA ALA ALA VAL PRO GLU VAL GLU SEQRES 28 A 395 LEU SER ASP GLN PRO GLU ASN THR PHE LEU HIS PRO ILE SEQRES 29 A 395 ILE GLN ILE ASP ARG SER PHE MET LEU LEU ILE LEU GLU SEQRES 30 A 395 ARG SER THR ARG SER ILE LEU PHE LEU GLY LYS VAL VAL SEQRES 31 A 395 ASN PRO THR GLU ALA HET T44 A 401 24 HET GOL A 402 6 HET GOL A 403 6 HET F A 404 1 HET EDO A 405 4 HET NA A 406 1 HETNAM T44 3,5,3',5'-TETRAIODO-L-THYRONINE HETNAM GOL GLYCEROL HETNAM F FLUORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 T44 C15 H11 I4 N O4 FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 F F 1- FORMUL 6 EDO C2 H6 O2 FORMUL 7 NA NA 1+ FORMUL 8 HOH *365(H2 O) HELIX 1 AA1 ALA A 17 THR A 41 1 25 HELIX 2 AA2 SER A 49 GLY A 63 1 15 HELIX 3 AA3 CYS A 65 LEU A 76 1 12 HELIX 4 AA4 PRO A 84 PHE A 101 1 18 HELIX 5 AA5 LEU A 123 GLU A 135 1 13 HELIX 6 AA6 ASN A 145 THR A 161 1 17 HELIX 7 AA7 ASP A 195 THR A 199 5 5 HELIX 8 AA8 GLN A 256 MET A 264 1 9 HELIX 9 AA9 SER A 265 LEU A 276 1 12 HELIX 10 AB1 LEU A 296 GLY A 304 1 9 HELIX 11 AB2 GLN A 306 SER A 310 5 5 HELIX 12 AB3 PRO A 348 LEU A 352 5 5 SHEET 1 AA1 7 ILE A 46 PHE A 48 0 SHEET 2 AA1 7 SER A 382 VAL A 389 -1 O LEU A 386 N PHE A 48 SHEET 3 AA1 7 PHE A 371 GLU A 377 -1 N PHE A 371 O VAL A 389 SHEET 4 AA1 7 ALA A 245 PRO A 252 -1 N VAL A 250 O MET A 372 SHEET 5 AA1 7 CYS A 234 ASP A 240 -1 N THR A 235 O LEU A 251 SHEET 6 AA1 7 THR A 212 ASP A 229 -1 N ASP A 229 O CYS A 234 SHEET 7 AA1 7 GLU A 200 LEU A 206 -1 N GLU A 200 O MET A 217 SHEET 1 AA2 8 ILE A 46 PHE A 48 0 SHEET 2 AA2 8 SER A 382 VAL A 389 -1 O LEU A 386 N PHE A 48 SHEET 3 AA2 8 PHE A 371 GLU A 377 -1 N PHE A 371 O VAL A 389 SHEET 4 AA2 8 ALA A 245 PRO A 252 -1 N VAL A 250 O MET A 372 SHEET 5 AA2 8 CYS A 234 ASP A 240 -1 N THR A 235 O LEU A 251 SHEET 6 AA2 8 THR A 212 ASP A 229 -1 N ASP A 229 O CYS A 234 SHEET 7 AA2 8 GLN A 277 PRO A 286 -1 O VAL A 285 N MET A 218 SHEET 8 AA2 8 ILE A 364 GLN A 366 1 O ILE A 365 N PHE A 284 SHEET 1 AA3 5 GLU A 137 THR A 141 0 SHEET 2 AA3 5 LEU A 106 GLY A 117 1 N ILE A 116 O PHE A 139 SHEET 3 AA3 5 MET A 178 ALA A 188 -1 O HIS A 185 N GLN A 109 SHEET 4 AA3 5 ASN A 328 ILE A 337 1 O ALA A 330 N LEU A 180 SHEET 5 AA3 5 PHE A 288 ASP A 295 -1 N TYR A 294 O HIS A 331 LINK OE1 GLU A 351 NA NA A 406 1555 1555 2.88 LINK NA NA A 406 O HOH A 747 1555 1555 2.43 SITE 1 AC1 13 SER A 23 GLU A 137 PHE A 139 LEU A 269 SITE 2 AC1 13 LYS A 270 ASN A 273 LEU A 376 GLU A 377 SITE 3 AC1 13 ARG A 378 HOH A 501 HOH A 554 HOH A 594 SITE 4 AC1 13 HOH A 635 SITE 1 AC2 8 LEU A 206 ILE A 207 ASP A 208 GLU A 254 SITE 2 AC2 8 ARG A 369 SER A 370 HOH A 820 HOH A 853 SITE 1 AC3 8 ASP A 28 PHE A 29 ASN A 32 THR A 75 SITE 2 AC3 8 GLY A 77 MET A 303 HOH A 654 HOH A 724 SITE 1 AC4 4 ALA A 191 GLU A 351 NA A 406 HOH A 776 SITE 1 AC5 3 ARG A 36 HOH A 657 HOH A 724 SITE 1 AC6 4 ALA A 191 GLU A 351 F A 404 HOH A 747 CRYST1 65.460 65.460 202.710 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015277 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015277 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004933 0.00000