HEADER VIRAL PROTEIN 27-NOV-14 4X35 TITLE A MICRO-PATTERNED SILICON CHIP AS SAMPLE HOLDER FOR MACROMOLECULAR TITLE 2 CRYSTALLOGRAPHY EXPERIMENTS WITH MINIMAL BACKGROUND SCATTERING COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYHEDRIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OPEROPHTERA BRUMATA CYPOVIRUS 18; SOURCE 3 ORGANISM_TAXID: 352244; SOURCE 4 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 5 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 7 EXPRESSION_SYSTEM_CELL: INSECT; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PBACPAK9 KEYWDS VIRAL PROTEIN, MICROCRYSTALS, POLYHEDRA EXPDTA X-RAY DIFFRACTION AUTHOR P.ROEDIG,I.VARTIAINEN,R.DUMAN,S.PANNEERSELVAM,N.STUEBE,O.LORBEER, AUTHOR 2 M.WARMER,G.SUTTON,D.I.STUART,E.WECKERT,C.DAVID,A.WAGNER,A.MEENTS REVDAT 3 23-OCT-24 4X35 1 REMARK REVDAT 2 10-JAN-24 4X35 1 LINK ATOM REVDAT 1 10-JUN-15 4X35 0 JRNL AUTH P.ROEDIG,I.VARTIAINEN,R.DUMAN,S.PANNEERSELVAM,N.STUBE, JRNL AUTH 2 O.LORBEER,M.WARMER,G.SUTTON,D.I.STUART,E.WECKERT,C.DAVID, JRNL AUTH 3 A.WAGNER,A.MEENTS JRNL TITL A MICRO-PATTERNED SILICON CHIP AS SAMPLE HOLDER FOR JRNL TITL 2 MACROMOLECULAR CRYSTALLOGRAPHY EXPERIMENTS WITH MINIMAL JRNL TITL 3 BACKGROUND SCATTERING. JRNL REF SCI REP V. 5 10451 2015 JRNL REFN ESSN 2045-2322 JRNL PMID 26022615 JRNL DOI 10.1038/SREP10451 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.35 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 28126 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.130 REMARK 3 R VALUE (WORKING SET) : 0.127 REMARK 3 FREE R VALUE : 0.170 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.380 REMARK 3 FREE R VALUE TEST SET COUNT : 1794 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.3595 - 3.5267 0.99 2161 151 0.1046 0.1150 REMARK 3 2 3.5267 - 2.7995 0.99 2089 144 0.1090 0.1295 REMARK 3 3 2.7995 - 2.4457 1.00 2110 143 0.1224 0.1810 REMARK 3 4 2.4457 - 2.2222 1.00 2079 139 0.1190 0.1894 REMARK 3 5 2.2222 - 2.0629 1.00 2082 139 0.1154 0.1625 REMARK 3 6 2.0629 - 1.9413 1.00 2074 142 0.1170 0.1491 REMARK 3 7 1.9413 - 1.8441 0.99 2066 141 0.1311 0.1564 REMARK 3 8 1.8441 - 1.7638 0.98 2038 140 0.1373 0.2011 REMARK 3 9 1.7638 - 1.6959 0.97 2047 139 0.1466 0.2036 REMARK 3 10 1.6959 - 1.6374 0.96 1958 131 0.1590 0.2205 REMARK 3 11 1.6374 - 1.5862 0.93 1929 135 0.1612 0.2215 REMARK 3 12 1.5862 - 1.5408 0.90 1874 126 0.1761 0.2743 REMARK 3 13 1.5408 - 1.5003 0.87 1825 124 0.1815 0.2398 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 6.04 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 7.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2166 REMARK 3 ANGLE : 1.164 2961 REMARK 3 CHIRALITY : 0.047 295 REMARK 3 PLANARITY : 0.006 382 REMARK 3 DIHEDRAL : 17.840 802 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4X35 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000204985. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28225 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 80.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.19600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.6900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.47900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.410 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2OH5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS GREW WITHIN INSECT CELL, REMARK 280 INCUBATED AT 301K, PH 7.5, IN CELL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 51.40500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 51.40500 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 51.40500 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 51.40500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 51.40500 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 51.40500 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 51.40500 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 51.40500 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 51.40500 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 51.40500 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 51.40500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 51.40500 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 51.40500 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 51.40500 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 51.40500 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 51.40500 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 51.40500 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 51.40500 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 51.40500 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 51.40500 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 51.40500 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 51.40500 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 51.40500 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 51.40500 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 51.40500 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 51.40500 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 51.40500 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 51.40500 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 51.40500 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 51.40500 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 51.40500 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 51.40500 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 51.40500 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 51.40500 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 51.40500 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 51.40500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 MG MG A 302 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 570 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 579 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 542 O HOH A 542 2875 2.19 REMARK 500 O HOH A 571 O HOH A 571 3856 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 57 -49.60 73.84 REMARK 500 ASP A 78 59.68 39.15 REMARK 500 SER A 131 37.24 71.24 REMARK 500 ASP A 135 -53.95 72.45 REMARK 500 TYR A 224 -72.66 -125.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 96 OE1 REMARK 620 2 GLU A 96 OE2 49.0 REMARK 620 3 GLU A 96 OE1 0.0 49.0 REMARK 620 4 GLU A 96 OE2 49.0 0.0 49.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GTP A 304 O1B REMARK 620 2 GTP A 304 O1A 71.6 REMARK 620 3 GTP A 304 O1G 91.5 100.8 REMARK 620 4 HOH A 410 O 70.7 65.6 160.0 REMARK 620 5 HOH A 551 O 159.7 89.0 98.2 96.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GTP A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 305 DBREF 4X35 A 2 248 UNP Q30C70 Q30C70_9REOV 2 248 SEQADV 4X35 ACE A 1 UNP Q30C70 EXPRESSION TAG SEQRES 1 A 248 ACE ALA ASP VAL ALA GLY THR SER ASN ARG ASP PHE ARG SEQRES 2 A 248 GLY ARG GLU GLN ARG LEU TYR ASN SER GLU GLN TYR ASN SEQRES 3 A 248 TYR ASN ASN SER LEU ASN GLY GLU VAL SER LEU TRP VAL SEQRES 4 A 248 TYR ALA TYR TYR SER ASP GLY SER VAL LEU VAL ARG ASN SEQRES 5 A 248 CYS ASN SER GLN TYR LYS VAL GLY ILE SER GLU CYS PHE SEQRES 6 A 248 LYS SER LEU LYS GLU VAL ARG VAL GLY GLN ASN ASN ASP SEQRES 7 A 248 PRO TYR ASP GLU GLN GLU VAL ASN ASN GLY VAL TYR TYR SEQRES 8 A 248 PRO ASN GLY GLY GLU PRO THR LYS PHE HIS SER ASN ALA SEQRES 9 A 248 LYS PRO ARG ALA ILE GLN ILE ILE PHE SER PRO SER VAL SEQRES 10 A 248 ASN VAL HIS THR ILE LYS MSE ALA LYS GLY ASN SER VAL SEQRES 11 A 248 SER ILE PRO LYS ASP TYR LEU GLN ARG SER HIS PRO TRP SEQRES 12 A 248 GLU ALA THR GLY VAL LYS TYR ARG LYS ILE HIS VAL ASP SEQRES 13 A 248 GLY GLU ILE VAL GLY TYR SER HIS TYR PHE GLU LEU PRO SEQRES 14 A 248 HIS GLU TYR ASN SER ILE SER LEU SER VAL SER GLY VAL SEQRES 15 A 248 HIS LYS ASN PRO SER SER TYR ASN VAL ALA ALA PRO HIS SEQRES 16 A 248 ASN ILE MSE ASP VAL PHE GLN SER CYS ASP LEU ALA LEU SEQRES 17 A 248 LYS PHE SER ASN ARG TYR TRP CYS GLU LEU GLU LEU ILE SEQRES 18 A 248 ASN HIS TYR ILE SER ALA TYR ALA TYR PRO TYR LEU ASP SEQRES 19 A 248 ILE ASN ASN HIS LYS TYR GLY VAL PRO LEU ASN GLY ARG SEQRES 20 A 248 GLN MODRES 4X35 MSE A 124 MET MODIFIED RESIDUE MODRES 4X35 MSE A 198 MET MODIFIED RESIDUE HET ACE A 1 3 HET MSE A 124 8 HET MSE A 198 8 HET CL A 301 1 HET MG A 302 1 HET MG A 303 1 HET GTP A 304 32 HET ATP A 305 31 HETNAM ACE ACETYL GROUP HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 1 ACE C2 H4 O FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 2 CL CL 1- FORMUL 3 MG 2(MG 2+) FORMUL 5 GTP C10 H16 N5 O14 P3 FORMUL 6 ATP C10 H16 N5 O13 P3 FORMUL 7 HOH *216(H2 O) HELIX 1 AA1 ASP A 11 SER A 30 1 20 HELIX 2 AA2 PHE A 65 LYS A 69 5 5 HELIX 3 AA3 ASP A 78 TYR A 91 1 14 HELIX 4 AA4 TYR A 136 SER A 140 5 5 HELIX 5 AA5 THR A 146 TYR A 150 5 5 HELIX 6 AA6 ASN A 196 ALA A 207 1 12 HELIX 7 AA7 CYS A 216 TYR A 224 1 9 SHEET 1 AA1 6 ARG A 151 VAL A 155 0 SHEET 2 AA1 6 GLU A 158 GLU A 167 -1 O SER A 163 N ARG A 151 SHEET 3 AA1 6 ALA A 108 PHE A 113 -1 N ILE A 111 O HIS A 164 SHEET 4 AA1 6 GLU A 34 TYR A 42 -1 N TYR A 40 O GLN A 110 SHEET 5 AA1 6 VAL A 48 GLN A 56 -1 O ARG A 51 N VAL A 39 SHEET 6 AA1 6 LEU A 208 TYR A 214 -1 O PHE A 210 N ASN A 52 SHEET 1 AA2 3 LYS A 58 GLU A 63 0 SHEET 2 AA2 3 SER A 176 HIS A 183 -1 O LEU A 177 N GLU A 63 SHEET 3 AA2 3 VAL A 117 GLY A 127 -1 N ALA A 125 O SER A 178 SHEET 1 AA3 2 TYR A 232 LEU A 233 0 SHEET 2 AA3 2 LYS A 239 TYR A 240 -1 O TYR A 240 N TYR A 232 LINK C ACE A 1 N ALA A 2 1555 1555 1.33 LINK C LYS A 123 N MSE A 124 1555 1555 1.33 LINK C MSE A 124 N ALA A 125 1555 1555 1.33 LINK C ILE A 197 N MSE A 198 1555 1555 1.33 LINK C MSE A 198 N ASP A 199 1555 1555 1.33 LINK OE1 GLU A 96 MG MG A 302 1555 1555 2.84 LINK OE2 GLU A 96 MG MG A 302 1555 1555 2.41 LINK OE1 GLU A 96 MG MG A 302 1555 7674 2.84 LINK OE2 GLU A 96 MG MG A 302 1555 7674 2.41 LINK MG MG A 303 O1B GTP A 304 1555 1555 2.11 LINK MG MG A 303 O1A GTP A 304 1555 1555 2.43 LINK MG MG A 303 O1G GTP A 304 1555 1555 1.97 LINK MG MG A 303 O HOH A 410 1555 1555 2.23 LINK MG MG A 303 O HOH A 551 1555 1555 2.40 SITE 1 AC1 1 LEU A 31 SITE 1 AC2 1 GLU A 96 SITE 1 AC3 3 GTP A 304 HOH A 410 HOH A 551 SITE 1 AC4 11 ARG A 18 HIS A 170 TYR A 172 ASN A 173 SITE 2 AC4 11 LYS A 184 MG A 303 ATP A 305 HOH A 410 SITE 3 AC4 11 HOH A 430 HOH A 494 HOH A 544 SITE 1 AC5 15 LYS A 152 HIS A 154 ASP A 156 GLY A 157 SITE 2 AC5 15 ILE A 159 LYS A 184 GTP A 304 HOH A 415 SITE 3 AC5 15 HOH A 421 HOH A 430 HOH A 442 HOH A 465 SITE 4 AC5 15 HOH A 469 HOH A 470 HOH A 508 CRYST1 102.810 102.810 102.810 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009727 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009727 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009727 0.00000 HETATM 1 C ACE A 1 165.041 86.114 42.061 1.00 8.59 C ANISOU 1 C ACE A 1 947 1236 1082 139 329 -374 C HETATM 2 O ACE A 1 165.371 86.684 43.103 1.00 9.49 O ANISOU 2 O ACE A 1 1009 1289 1307 79 211 -413 O HETATM 3 CH3 ACE A 1 165.867 85.009 41.463 1.00 8.52 C ANISOU 3 CH3 ACE A 1 899 1214 1126 63 274 -371 C