HEADER HYDROLASE 28-NOV-14 4X36 TITLE CRYSTAL STRUCTURE OF THE AUTOLYSIN LYTA FROM STREPTOCOCCUS PNEUMONIAE TITLE 2 TIGR4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AUTOLYSIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CELL WALL HYDROLASE,MUCOPEPTIDE AMINOHYDROLASE,MUREIN COMPND 5 HYDROLASE,N-ACETYLMURAMOYL-L-ALANINE AMIDASE; COMPND 6 EC: 3.5.1.28; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE TIGR4; SOURCE 3 ORGANISM_TAXID: 170187; SOURCE 4 GENE: LYTA, SP_1937; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS AUTOLYSIN, AMIDASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR W.CHENG,Q.LI,C.Z.ZHOU,Y.X.CHEN REVDAT 2 24-JUN-15 4X36 1 JRNL REVDAT 1 27-MAY-15 4X36 0 JRNL AUTH Q.LI,W.CHENG,C.MORLOT,X.H.BAI,Y.L.JIANG,W.WANG,D.I.ROPER, JRNL AUTH 2 T.VERNET,Y.H.DONG,Y.CHEN,C.Z.ZHOU JRNL TITL FULL-LENGTH STRUCTURE OF THE MAJOR AUTOLYSIN LYTA. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 71 1373 2015 JRNL REFN ESSN 1399-0047 JRNL PMID 26057677 JRNL DOI 10.1107/S1399004715007403 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 36808 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1841 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.6431 - 4.5252 0.99 3721 177 0.1727 0.2055 REMARK 3 2 4.5252 - 3.5922 1.00 3524 207 0.1434 0.1463 REMARK 3 3 3.5922 - 3.1382 1.00 3517 188 0.1776 0.2008 REMARK 3 4 3.1382 - 2.8513 1.00 3511 178 0.1767 0.1927 REMARK 3 5 2.8513 - 2.6470 1.00 3484 171 0.2062 0.2396 REMARK 3 6 2.6470 - 2.4909 1.00 3436 205 0.2175 0.2443 REMARK 3 7 2.4909 - 2.3662 1.00 3463 187 0.2118 0.2528 REMARK 3 8 2.3662 - 2.2632 1.00 3437 177 0.2363 0.2685 REMARK 3 9 2.2632 - 2.1761 1.00 3448 171 0.2367 0.2637 REMARK 3 10 2.1761 - 2.1010 1.00 3426 180 0.2497 0.2645 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 38.53 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.610 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.29940 REMARK 3 B22 (A**2) : 5.29940 REMARK 3 B33 (A**2) : -10.59880 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2753 REMARK 3 ANGLE : 1.084 3732 REMARK 3 CHIRALITY : 0.076 358 REMARK 3 PLANARITY : 0.005 472 REMARK 3 DIHEDRAL : 13.082 982 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4X36 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000204973. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI(LLL) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36872 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 9.300 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.40 REMARK 200 R MERGE FOR SHELL (I) : 0.46900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PROPANE PH 7.0, 1.3 M REMARK 280 AMMONIUM TARTRATE DIBASIC, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.78850 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 50.64100 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 50.64100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 89.68275 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 50.64100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 50.64100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 29.89425 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 50.64100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.64100 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 89.68275 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 50.64100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.64100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 29.89425 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.78850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -119.57700 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 265 -118.66 50.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 407 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 26 ND1 REMARK 620 2 HIS A 133 ND1 97.1 REMARK 620 3 ASP A 149 OD2 107.2 115.3 REMARK 620 4 HOH A 563 O 108.4 118.9 108.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CHT A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CHT A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CHT A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CHT A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CHT A 412 DBREF 4X36 A 1 318 UNP P06653 ALYS_STRPN 1 318 SEQRES 1 A 318 MSE GLU ILE ASN VAL SER LYS LEU ARG THR ASP LEU PRO SEQRES 2 A 318 GLN VAL GLY VAL GLN PRO TYR ARG GLN VAL HIS ALA HIS SEQRES 3 A 318 SER THR GLY ASN PRO HIS SER THR VAL GLN ASN GLU ALA SEQRES 4 A 318 ASP TYR HIS TRP ARG LYS ASP PRO GLU LEU GLY PHE PHE SEQRES 5 A 318 SER HIS ILE VAL GLY ASN GLY CYS ILE MSE GLN VAL GLY SEQRES 6 A 318 PRO VAL ASP ASN GLY ALA TRP ASP VAL GLY GLY GLY TRP SEQRES 7 A 318 ASN ALA GLU THR TYR ALA ALA VAL GLU LEU ILE GLU SER SEQRES 8 A 318 HIS SER THR LYS GLU GLU PHE MSE THR ASP TYR ARG LEU SEQRES 9 A 318 TYR ILE GLU LEU LEU ARG ASN LEU ALA ASP GLU ALA GLY SEQRES 10 A 318 LEU PRO LYS THR LEU ASP THR GLY SER LEU ALA GLY ILE SEQRES 11 A 318 LYS THR HIS GLU TYR CYS THR ASN ASN GLN PRO ASN ASN SEQRES 12 A 318 HIS SER ASP HIS VAL ASP PRO TYR PRO TYR LEU ALA LYS SEQRES 13 A 318 TRP GLY ILE SER ARG GLU GLN PHE LYS HIS ASP ILE GLU SEQRES 14 A 318 ASN GLY LEU THR ILE GLU THR GLY TRP GLN LYS ASN ASP SEQRES 15 A 318 THR GLY TYR TRP TYR VAL HIS SER ASP GLY SER TYR PRO SEQRES 16 A 318 LYS ASP LYS PHE GLU LYS ILE ASN GLY THR TRP TYR TYR SEQRES 17 A 318 PHE ASP SER SER GLY TYR MSE LEU ALA ASP ARG TRP ARG SEQRES 18 A 318 LYS HIS THR ASP GLY ASN TRP TYR TRP PHE ASP ASN SER SEQRES 19 A 318 GLY GLU MSE ALA THR GLY TRP LYS LYS ILE ALA ASP LYS SEQRES 20 A 318 TRP TYR TYR PHE ASN GLU GLU GLY ALA MSE LYS THR GLY SEQRES 21 A 318 TRP VAL LYS TYR LYS ASP THR TRP TYR TYR LEU ASP ALA SEQRES 22 A 318 LYS GLU GLY ALA MSE VAL SER ASN ALA PHE ILE GLN SER SEQRES 23 A 318 ALA ASP GLY THR GLY TRP TYR TYR LEU LYS PRO ASP GLY SEQRES 24 A 318 THR LEU ALA ASP LYS PRO GLU PHE THR VAL GLU PRO ASP SEQRES 25 A 318 GLY LEU ILE THR VAL LYS MODRES 4X36 MSE A 1 MODIFIED RESIDUE MODRES 4X36 MSE A 62 MET MODIFIED RESIDUE MODRES 4X36 MSE A 99 MET MODIFIED RESIDUE MODRES 4X36 MSE A 215 MET MODIFIED RESIDUE MODRES 4X36 MSE A 237 MET MODIFIED RESIDUE MODRES 4X36 MSE A 257 MET MODIFIED RESIDUE MODRES 4X36 MSE A 278 MET MODIFIED RESIDUE HET MSE A 1 8 HET MSE A 62 8 HET MSE A 99 8 HET MSE A 215 8 HET MSE A 237 8 HET MSE A 257 8 HET MSE A 278 8 HET GOL A 401 6 HET GOL A 402 6 HET GOL A 403 6 HET GOL A 404 6 HET GOL A 405 6 HET GOL A 406 6 HET ZN A 407 1 HET CHT A 408 7 HET CHT A 409 7 HET CHT A 410 7 HET CHT A 411 7 HET CHT A 412 7 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETNAM ZN ZINC ION HETNAM CHT CHOLINE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 2 GOL 6(C3 H8 O3) FORMUL 8 ZN ZN 2+ FORMUL 9 CHT 5(C5 H14 N O 1+) FORMUL 14 HOH *241(H2 O) HELIX 1 AA1 THR A 34 LYS A 45 1 12 HELIX 2 AA2 ASP A 46 GLY A 50 5 5 HELIX 3 AA3 GLY A 76 ALA A 80 5 5 HELIX 4 AA4 THR A 94 ALA A 116 1 23 HELIX 5 AA5 HIS A 133 GLN A 140 1 8 HELIX 6 AA6 PRO A 150 TRP A 157 1 8 HELIX 7 AA7 SER A 160 GLY A 171 1 12 SHEET 1 AA1 5 CYS A 60 GLN A 63 0 SHEET 2 AA1 5 HIS A 54 GLY A 57 -1 N ILE A 55 O MSE A 62 SHEET 3 AA1 5 THR A 82 LEU A 88 1 O GLU A 87 N VAL A 56 SHEET 4 AA1 5 GLN A 22 SER A 27 1 N GLN A 22 O TYR A 83 SHEET 5 AA1 5 GLY A 129 THR A 132 1 O LYS A 131 N VAL A 23 SHEET 1 AA2 2 GLY A 177 LYS A 180 0 SHEET 2 AA2 2 TYR A 185 VAL A 188 -1 O VAL A 188 N GLY A 177 SHEET 1 AA3 2 LYS A 198 ILE A 202 0 SHEET 2 AA3 2 THR A 205 PHE A 209 -1 O THR A 205 N ILE A 202 SHEET 1 AA4 2 ARG A 219 LYS A 222 0 SHEET 2 AA4 2 TRP A 228 PHE A 231 -1 O PHE A 231 N ARG A 219 SHEET 1 AA5 2 GLY A 240 ILE A 244 0 SHEET 2 AA5 2 LYS A 247 PHE A 251 -1 O LYS A 247 N ILE A 244 SHEET 1 AA6 2 GLY A 260 TYR A 264 0 SHEET 2 AA6 2 THR A 267 LEU A 271 -1 O THR A 267 N TYR A 264 SHEET 1 AA7 2 ALA A 282 GLN A 285 0 SHEET 2 AA7 2 TRP A 292 LEU A 295 -1 O TYR A 293 N ILE A 284 SHEET 1 AA8 2 PHE A 307 VAL A 309 0 SHEET 2 AA8 2 ILE A 315 VAL A 317 -1 O THR A 316 N THR A 308 LINK C MSE A 1 N GLU A 2 1555 1555 1.33 LINK ND1 HIS A 26 ZN ZN A 407 1555 1555 2.17 LINK C ILE A 61 N MSE A 62 1555 1555 1.33 LINK C MSE A 62 N GLN A 63 1555 1555 1.33 LINK C PHE A 98 N MSE A 99 1555 1555 1.33 LINK C MSE A 99 N THR A 100 1555 1555 1.33 LINK ND1 HIS A 133 ZN ZN A 407 1555 1555 2.11 LINK OD2 ASP A 149 ZN ZN A 407 1555 1555 2.03 LINK C TYR A 214 N MSE A 215 1555 1555 1.33 LINK C MSE A 215 N LEU A 216 1555 1555 1.33 LINK C GLU A 236 N MSE A 237 1555 1555 1.33 LINK C MSE A 237 N ALA A 238 1555 1555 1.33 LINK C ALA A 256 N MSE A 257 1555 1555 1.33 LINK C MSE A 257 N LYS A 258 1555 1555 1.33 LINK C ALA A 277 N MSE A 278 1555 1555 1.33 LINK C MSE A 278 N VAL A 279 1555 1555 1.32 LINK ZN ZN A 407 O HOH A 563 1555 1555 2.12 CISPEP 1 GLN A 18 PRO A 19 0 -0.88 CISPEP 2 ASP A 149 PRO A 150 0 3.72 CISPEP 3 ASP A 312 GLY A 313 0 -8.62 SITE 1 AC1 7 ASN A 111 GLU A 115 TRP A 157 HOH A 515 SITE 2 AC1 7 HOH A 517 HOH A 534 HOH A 545 SITE 1 AC2 3 ASN A 30 GLU A 38 TYR A 41 SITE 1 AC3 8 GLN A 18 ASP A 68 GLY A 192 TYR A 194 SITE 2 AC3 8 HOH A 501 HOH A 516 HOH A 535 HOH A 541 SITE 1 AC4 5 ARG A 9 THR A 10 ASP A 11 TRP A 43 SITE 2 AC4 5 HOH A 510 SITE 1 AC5 3 GLY A 77 ASN A 79 GOL A 406 SITE 1 AC6 3 GLU A 48 GOL A 405 HOH A 574 SITE 1 AC7 4 HIS A 26 HIS A 133 ASP A 149 HOH A 563 SITE 1 AC8 3 TRP A 220 TRP A 228 GLU A 275 SITE 1 AC9 5 TRP A 248 TYR A 264 TYR A 269 HOH A 540 SITE 2 AC9 5 HOH A 551 SITE 1 AD1 3 TRP A 261 TRP A 268 ASP A 312 SITE 1 AD2 5 PHE A 199 TRP A 206 GLU A 254 HOH A 716 SITE 2 AD2 5 HOH A 720 SITE 1 AD3 4 TRP A 186 TYR A 194 SER A 212 TYR A 214 CRYST1 101.282 101.282 119.577 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009873 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009873 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008363 0.00000 HETATM 1 N MSE A 1 -44.964 -4.177 -7.266 1.00 40.22 N HETATM 2 CA MSE A 1 -45.008 -3.307 -8.444 1.00 44.87 C HETATM 3 C MSE A 1 -45.649 -1.979 -8.075 1.00 43.01 C HETATM 4 O MSE A 1 -46.500 -1.929 -7.185 1.00 42.64 O HETATM 5 CB MSE A 1 -45.829 -3.955 -9.559 1.00 42.09 C HETATM 6 CG MSE A 1 -45.414 -5.376 -9.912 1.00 40.85 C HETATM 7 SE MSE A 1 -46.393 -5.979 -11.481 0.61 39.35 SE HETATM 8 CE MSE A 1 -45.499 -4.912 -12.821 1.00 33.48 C