HEADER TRANSFERASE/TRANSFERASE INHIBITOR 09-DEC-14 4X7O TITLE CO-CRYSTAL STRUCTURE OF PERK BOUND TO 1-[5-(4-AMINO-2,7-DIMETHYL-7H- TITLE 2 PYRROLO[2,3-D]PYRIMIDIN-5-YL)-2,3-DIHYDRO-1H-INDOL-1-YL]-2-[3-FLUORO- TITLE 3 5-(TRIFLUOROMETHYL)PHENYL]ETHANONE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE 3, COMPND 3 EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE 3; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: PRKR-LIKE ENDOPLASMIC RETICULUM KINASE,PANCREATIC EIF2-ALPHA COMPND 6 KINASE,HSPEK; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EIF2AK3, PEK, PERK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CATALYTIC DOMAIN, TRANSFERASE-TRANSFERASE INHIBITOR, COMPLEX, KEYWDS 2 TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR P.L.SHAFFER,A.M.LONG,H.CHEN REVDAT 3 27-SEP-23 4X7O 1 SOURCE JRNL REMARK REVDAT 2 25-FEB-15 4X7O 1 JRNL REVDAT 1 28-JAN-15 4X7O 0 JRNL AUTH A.L.SMITH,K.L.ANDREWS,H.BECKMANN,S.F.BELLON,P.J.BELTRAN, JRNL AUTH 2 S.BOOKER,H.CHEN,Y.A.CHUNG,N.D.D'ANGELO,J.DAO, JRNL AUTH 3 K.R.DELLAMAGGIORE,P.JAECKEL,R.KENDALL,K.LABITZKE,A.M.LONG, JRNL AUTH 4 S.MATERNA-REICHELT,P.MITCHELL,M.H.NORMAN,D.POWERS,M.ROSE, JRNL AUTH 5 P.L.SHAFFER,M.M.WU,J.R.LIPFORD JRNL TITL DISCOVERY OF 1H-PYRAZOL-3(2H)-ONES AS POTENT AND SELECTIVE JRNL TITL 2 INHIBITORS OF PROTEIN KINASE R-LIKE ENDOPLASMIC RETICULUM JRNL TITL 3 KINASE (PERK). JRNL REF J.MED.CHEM. V. 58 1426 2015 JRNL REFN ISSN 0022-2623 JRNL PMID 25587754 JRNL DOI 10.1021/JM5017494 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 773 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 965 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.50 REMARK 3 BIN R VALUE (WORKING SET) : 0.3570 REMARK 3 BIN FREE R VALUE SET COUNT : 49 REMARK 3 BIN FREE R VALUE : 0.3610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2015 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 23 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 93.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.34000 REMARK 3 B22 (A**2) : -6.34000 REMARK 3 B33 (A**2) : 9.51000 REMARK 3 B12 (A**2) : -3.17000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.308 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.231 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.204 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.021 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2104 ; 0.006 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2848 ; 1.031 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 243 ; 4.807 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 101 ;33.348 ;23.564 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 373 ;15.270 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;15.800 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 307 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1591 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 585 A 889 REMARK 3 ORIGIN FOR THE GROUP (A): -43.8016 57.0751 -9.4896 REMARK 3 T TENSOR REMARK 3 T11: 0.1062 T22: 0.3034 REMARK 3 T33: 0.4408 T12: -0.1095 REMARK 3 T13: 0.0775 T23: -0.0365 REMARK 3 L TENSOR REMARK 3 L11: 5.8665 L22: 3.8161 REMARK 3 L33: 4.6379 L12: 0.0627 REMARK 3 L13: 0.0505 L23: -0.1676 REMARK 3 S TENSOR REMARK 3 S11: 0.1738 S12: 0.0002 S13: 0.6916 REMARK 3 S21: 0.2279 S22: -0.2065 S23: 0.7786 REMARK 3 S31: -0.2954 S32: -0.3867 S33: 0.0327 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 890 A 1081 REMARK 3 ORIGIN FOR THE GROUP (A): -42.6558 28.8062 -9.9113 REMARK 3 T TENSOR REMARK 3 T11: 0.4138 T22: 0.2260 REMARK 3 T33: 0.2518 T12: -0.1045 REMARK 3 T13: 0.0138 T23: -0.0958 REMARK 3 L TENSOR REMARK 3 L11: 3.8121 L22: 7.7150 REMARK 3 L33: 1.5781 L12: 3.0060 REMARK 3 L13: -0.2135 L23: -0.5249 REMARK 3 S TENSOR REMARK 3 S11: 0.0151 S12: 0.3866 S13: -0.6652 REMARK 3 S21: 0.0433 S22: 0.0794 S23: -0.3577 REMARK 3 S31: 0.5945 S32: 0.1398 S33: -0.0944 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4X7O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000205220. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-APR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15481 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 8.600 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.67700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4X7J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15M NACL, 0.1M MES PH 6.5, 12% PEG REMARK 280 -3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.80200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 19.40100 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 19.40100 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 38.80200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1203 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 573 REMARK 465 SER A 574 REMARK 465 SER A 575 REMARK 465 SER A 576 REMARK 465 TRP A 577 REMARK 465 ASN A 578 REMARK 465 ASP A 579 REMARK 465 ILE A 580 REMARK 465 LYS A 581 REMARK 465 ASN A 582 REMARK 465 SER A 583 REMARK 465 GLY A 584 REMARK 465 GLY A 603 REMARK 465 PHE A 604 REMARK 465 GLU A 869 REMARK 465 LYS A 870 REMARK 465 TRP A 871 REMARK 465 GLN A 872 REMARK 465 GLU A 873 REMARK 465 LYS A 874 REMARK 465 LEU A 875 REMARK 465 GLN A 876 REMARK 465 PRO A 877 REMARK 465 SER A 878 REMARK 465 SER A 879 REMARK 465 PRO A 880 REMARK 465 LEU A 958 REMARK 465 VAL A 959 REMARK 465 THR A 960 REMARK 465 ALA A 961 REMARK 465 MET A 962 REMARK 465 ASP A 963 REMARK 465 GLN A 964 REMARK 465 ASP A 965 REMARK 465 GLU A 966 REMARK 465 GLU A 967 REMARK 465 GLU A 968 REMARK 465 GLN A 969 REMARK 465 THR A 970 REMARK 465 VAL A 971 REMARK 465 LEU A 972 REMARK 465 THR A 973 REMARK 465 PRO A 974 REMARK 465 MET A 975 REMARK 465 PRO A 976 REMARK 465 ALA A 977 REMARK 465 TYR A 978 REMARK 465 ALA A 979 REMARK 465 ARG A 980 REMARK 465 HIS A 981 REMARK 465 THR A 982 REMARK 465 GLY A 983 REMARK 465 GLN A 984 REMARK 465 VAL A 985 REMARK 465 GLY A 986 REMARK 465 GLY A 998 REMARK 465 ASN A 999 REMARK 465 SER A 1000 REMARK 465 PHE A 1082 REMARK 465 PRO A 1083 REMARK 465 GLY A 1084 REMARK 465 LYS A 1085 REMARK 465 THR A 1086 REMARK 465 VAL A 1087 REMARK 465 LEU A 1088 REMARK 465 ARG A 1089 REMARK 465 GLN A 1090 REMARK 465 ARG A 1091 REMARK 465 SER A 1092 REMARK 465 ARG A 1093 REMARK 465 SER A 1094 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 629 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 635 CG CD CE NZ REMARK 470 LYS A 893 CG CD CE NZ REMARK 470 GLU A 894 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 655 -63.32 -122.78 REMARK 500 ARG A 909 68.19 -105.35 REMARK 500 ASN A 937 33.15 -149.04 REMARK 500 LYS A 939 143.24 -177.14 REMARK 500 SER A1002 -169.72 -102.09 REMARK 500 GLU A1073 23.47 -75.61 REMARK 500 PHE A1077 55.04 -97.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3Z6 A 1101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4X7J RELATED DB: PDB REMARK 900 RELATED ID: 4X7H RELATED DB: PDB REMARK 900 RELATED ID: 4X7K RELATED DB: PDB REMARK 900 RELATED ID: 4X7L RELATED DB: PDB REMARK 900 RELATED ID: 4X7N RELATED DB: PDB DBREF 4X7O A 575 874 UNP Q9NZJ5 E2AK3_HUMAN 575 669 DBREF 4X7O A 875 1094 UNP Q9NZJ5 E2AK3_HUMAN 875 1094 SEQADV 4X7O GLY A 573 UNP Q9NZJ5 EXPRESSION TAG SEQADV 4X7O SER A 574 UNP Q9NZJ5 EXPRESSION TAG SEQADV 4X7O ASN A 937 UNP Q9NZJ5 ASP 937 ENGINEERED MUTATION SEQRES 1 A 317 GLY SER SER SER TRP ASN ASP ILE LYS ASN SER GLY TYR SEQRES 2 A 317 ILE SER ARG TYR LEU THR ASP PHE GLU PRO ILE GLN CYS SEQRES 3 A 317 LEU GLY ARG GLY GLY PHE GLY VAL VAL PHE GLU ALA LYS SEQRES 4 A 317 ASN LYS VAL ASP ASP CYS ASN TYR ALA ILE LYS ARG ILE SEQRES 5 A 317 ARG LEU PRO ASN ARG GLU LEU ALA ARG GLU LYS VAL MET SEQRES 6 A 317 ARG GLU VAL LYS ALA LEU ALA LYS LEU GLU HIS PRO GLY SEQRES 7 A 317 ILE VAL ARG TYR PHE ASN ALA TRP LEU GLU ALA PRO PRO SEQRES 8 A 317 GLU LYS TRP GLN GLU LYS LEU GLN PRO SER SER PRO LYS SEQRES 9 A 317 VAL TYR LEU TYR ILE GLN MET GLN LEU CYS ARG LYS GLU SEQRES 10 A 317 ASN LEU LYS ASP TRP MET ASN GLY ARG CYS THR ILE GLU SEQRES 11 A 317 GLU ARG GLU ARG SER VAL CYS LEU HIS ILE PHE LEU GLN SEQRES 12 A 317 ILE ALA GLU ALA VAL GLU PHE LEU HIS SER LYS GLY LEU SEQRES 13 A 317 MET HIS ARG ASN LEU LYS PRO SER ASN ILE PHE PHE THR SEQRES 14 A 317 MET ASP ASP VAL VAL LYS VAL GLY ASP PHE GLY LEU VAL SEQRES 15 A 317 THR ALA MET ASP GLN ASP GLU GLU GLU GLN THR VAL LEU SEQRES 16 A 317 THR PRO MET PRO ALA TYR ALA ARG HIS THR GLY GLN VAL SEQRES 17 A 317 GLY THR LYS LEU TYR MET SER PRO GLU GLN ILE HIS GLY SEQRES 18 A 317 ASN SER TYR SER HIS LYS VAL ASP ILE PHE SER LEU GLY SEQRES 19 A 317 LEU ILE LEU PHE GLU LEU LEU TYR PRO PHE SER THR GLN SEQRES 20 A 317 MET GLU ARG VAL ARG THR LEU THR ASP VAL ARG ASN LEU SEQRES 21 A 317 LYS PHE PRO PRO LEU PHE THR GLN LYS TYR PRO CYS GLU SEQRES 22 A 317 TYR VAL MET VAL GLN ASP MET LEU SER PRO SER PRO MET SEQRES 23 A 317 GLU ARG PRO GLU ALA ILE ASN ILE ILE GLU ASN ALA VAL SEQRES 24 A 317 PHE GLU ASP LEU ASP PHE PRO GLY LYS THR VAL LEU ARG SEQRES 25 A 317 GLN ARG SER ARG SER HET 3Z6 A1101 35 HETNAM 3Z6 1-[5-(4-AMINO-2,7-DIMETHYL-7H-PYRROLO[2,3-D]PYRIMIDIN- HETNAM 2 3Z6 5-YL)-2,3-DIHYDRO-1H-INDOL-1-YL]-2-[3-FLUORO-5- HETNAM 3 3Z6 (TRIFLUOROMETHYL)PHENYL]ETHANONE FORMUL 2 3Z6 C25 H21 F4 N5 O FORMUL 3 HOH *23(H2 O) HELIX 1 AA1 SER A 587 ASP A 592 1 6 HELIX 2 AA2 ARG A 629 LYS A 645 1 17 HELIX 3 AA3 ASN A 895 GLY A 902 1 8 HELIX 4 AA4 GLU A 910 LYS A 931 1 22 HELIX 5 AA5 LYS A 939 SER A 941 5 3 HELIX 6 AA6 SER A 992 HIS A 997 1 6 HELIX 7 AA7 HIS A 1003 TYR A 1019 1 17 HELIX 8 AA8 THR A 1023 ASN A 1036 1 14 HELIX 9 AA9 PRO A 1040 TYR A 1047 1 8 HELIX 10 AB1 TYR A 1047 LEU A 1058 1 12 HELIX 11 AB2 SER A 1061 ARG A 1065 5 5 HELIX 12 AB3 GLU A 1067 GLU A 1073 1 7 SHEET 1 AA1 5 PHE A 593 GLY A 600 0 SHEET 2 AA1 5 VAL A 606 ASN A 612 -1 O VAL A 607 N LEU A 599 SHEET 3 AA1 5 ASN A 618 ARG A 625 -1 O ILE A 621 N PHE A 608 SHEET 4 AA1 5 TYR A 883 GLN A 889 -1 O MET A 888 N ALA A 620 SHEET 5 AA1 5 TYR A 654 GLU A 660 -1 N ASN A 656 O GLN A 887 SHEET 1 AA2 2 ILE A 943 PHE A 945 0 SHEET 2 AA2 2 VAL A 951 VAL A 953 -1 O LYS A 952 N PHE A 944 SITE 1 AC1 13 ALA A 620 VAL A 640 LEU A 643 ALA A 644 SITE 2 AC1 13 VAL A 652 TYR A 654 ILE A 886 MET A 888 SITE 3 AC1 13 GLN A 889 CYS A 891 ARG A 892 ASP A 955 SITE 4 AC1 13 HOH A1209 CRYST1 125.366 125.366 58.203 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007977 0.004605 0.000000 0.00000 SCALE2 0.000000 0.009211 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017181 0.00000