HEADER UNKNOWN FUNCTION 10-DEC-14 4X8Q TITLE X-RAY CRYSTAL STRUCTURE OF ALKD2 FROM STREPTOCOCCUS MUTANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS MUTANS; SOURCE 3 ORGANISM_TAXID: 1309; SOURCE 4 STRAIN: CLARKE; SOURCE 5 ATCC: 25175; SOURCE 6 GENE: ALKD2; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PBG100 KEYWDS UNKNOWN FUNCTION, HEAT REPEAT, ALK MOTIF EXPDTA X-RAY DIFFRACTION AUTHOR E.A.MULLINS,R.SHI,B.F.EICHMAN REVDAT 4 27-SEP-23 4X8Q 1 LINK REVDAT 3 27-NOV-19 4X8Q 1 REMARK REVDAT 2 27-SEP-17 4X8Q 1 SOURCE REMARK REVDAT 1 27-MAY-15 4X8Q 0 JRNL AUTH E.A.MULLINS,R.SHI,L.A.KOTSCH,B.F.EICHMAN JRNL TITL A NEW FAMILY OF HEAT-LIKE REPEAT PROTEINS LACKING A CRITICAL JRNL TITL 2 SUBSTRATE RECOGNITION MOTIF PRESENT IN RELATED DNA JRNL TITL 3 GLYCOSYLASES. JRNL REF PLOS ONE V. 10 27733 2015 JRNL REFN ESSN 1932-6203 JRNL PMID 25978435 JRNL DOI 10.1371/JOURNAL.PONE.0127733 REMARK 2 REMARK 2 RESOLUTION. 1.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1819) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 31084 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.168 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1556 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1636 - 3.8449 0.99 2843 150 0.1429 0.1479 REMARK 3 2 3.8449 - 3.0522 1.00 2732 144 0.1455 0.1552 REMARK 3 3 3.0522 - 2.6664 1.00 2691 142 0.1646 0.1749 REMARK 3 4 2.6664 - 2.4227 1.00 2694 142 0.1629 0.1756 REMARK 3 5 2.4227 - 2.2491 1.00 2687 141 0.1488 0.1560 REMARK 3 6 2.2491 - 2.1165 1.00 2662 141 0.1394 0.1692 REMARK 3 7 2.1165 - 2.0105 1.00 2668 140 0.1521 0.2053 REMARK 3 8 2.0105 - 1.9230 1.00 2654 140 0.1572 0.1807 REMARK 3 9 1.9230 - 1.8489 1.00 2641 139 0.1678 0.2112 REMARK 3 10 1.8489 - 1.7851 1.00 2656 139 0.1625 0.1810 REMARK 3 11 1.7851 - 1.7293 0.99 2600 138 0.1738 0.2130 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.51 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1817 REMARK 3 ANGLE : 0.974 2445 REMARK 3 CHIRALITY : 0.042 257 REMARK 3 PLANARITY : 0.004 309 REMARK 3 DIHEDRAL : 12.483 716 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7398 73.2940 84.8106 REMARK 3 T TENSOR REMARK 3 T11: 0.7051 T22: 0.3261 REMARK 3 T33: 0.2216 T12: -0.0475 REMARK 3 T13: 0.1285 T23: 0.0283 REMARK 3 L TENSOR REMARK 3 L11: 3.1952 L22: 1.3826 REMARK 3 L33: 1.8822 L12: 0.0071 REMARK 3 L13: -1.2006 L23: -0.3017 REMARK 3 S TENSOR REMARK 3 S11: -0.0419 S12: 0.5004 S13: 0.1049 REMARK 3 S21: -1.1218 S22: 0.0265 S23: -0.1051 REMARK 3 S31: -0.0701 S32: 0.2013 S33: -0.0095 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 15 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.0696 80.6783 94.0375 REMARK 3 T TENSOR REMARK 3 T11: 0.4734 T22: 0.1521 REMARK 3 T33: 0.2423 T12: 0.0482 REMARK 3 T13: -0.0064 T23: 0.0251 REMARK 3 L TENSOR REMARK 3 L11: 7.5943 L22: 4.1775 REMARK 3 L33: 6.4419 L12: 1.4601 REMARK 3 L13: 3.1397 L23: 2.1950 REMARK 3 S TENSOR REMARK 3 S11: -0.0685 S12: 0.1910 S13: 0.8547 REMARK 3 S21: -0.8219 S22: 0.0447 S23: -0.1080 REMARK 3 S31: -0.9225 S32: 0.2005 S33: 0.0860 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 33 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.1591 68.1214 98.0449 REMARK 3 T TENSOR REMARK 3 T11: 0.1885 T22: 0.0909 REMARK 3 T33: 0.1010 T12: 0.0184 REMARK 3 T13: -0.0159 T23: -0.0131 REMARK 3 L TENSOR REMARK 3 L11: 2.5359 L22: 3.6295 REMARK 3 L33: 4.5528 L12: 0.2595 REMARK 3 L13: 0.0045 L23: 0.4195 REMARK 3 S TENSOR REMARK 3 S11: -0.0446 S12: 0.1036 S13: 0.0311 REMARK 3 S21: -0.4388 S22: 0.0315 S23: -0.0730 REMARK 3 S31: 0.0631 S32: -0.0261 S33: -0.0101 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.2918 75.4984 106.2068 REMARK 3 T TENSOR REMARK 3 T11: 0.1178 T22: 0.0993 REMARK 3 T33: 0.0882 T12: 0.0104 REMARK 3 T13: -0.0378 T23: -0.0290 REMARK 3 L TENSOR REMARK 3 L11: 3.5316 L22: 4.5945 REMARK 3 L33: 5.3721 L12: -0.1620 REMARK 3 L13: -2.6014 L23: 0.1800 REMARK 3 S TENSOR REMARK 3 S11: -0.0321 S12: -0.0121 S13: 0.1761 REMARK 3 S21: -0.2233 S22: 0.0631 S23: -0.0096 REMARK 3 S31: -0.2589 S32: -0.0435 S33: -0.0524 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.0785 70.4421 115.2777 REMARK 3 T TENSOR REMARK 3 T11: 0.1441 T22: 0.1070 REMARK 3 T33: 0.0846 T12: 0.0056 REMARK 3 T13: -0.0340 T23: -0.0437 REMARK 3 L TENSOR REMARK 3 L11: 6.9547 L22: 4.1141 REMARK 3 L33: 3.6178 L12: -0.7256 REMARK 3 L13: -0.5149 L23: 0.3165 REMARK 3 S TENSOR REMARK 3 S11: 0.0867 S12: 0.0303 S13: -0.3297 REMARK 3 S21: 0.2375 S22: -0.0929 S23: 0.0585 REMARK 3 S31: 0.3653 S32: -0.0134 S33: 0.0128 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.4921 82.4185 117.8822 REMARK 3 T TENSOR REMARK 3 T11: 0.0934 T22: 0.1546 REMARK 3 T33: 0.1530 T12: 0.0184 REMARK 3 T13: -0.0080 T23: -0.0482 REMARK 3 L TENSOR REMARK 3 L11: 7.2659 L22: 4.7799 REMARK 3 L33: 6.7227 L12: 2.0550 REMARK 3 L13: -2.6572 L23: -1.5028 REMARK 3 S TENSOR REMARK 3 S11: 0.0710 S12: 0.0777 S13: 0.3883 REMARK 3 S21: 0.1584 S22: -0.0128 S23: 0.4151 REMARK 3 S31: -0.1992 S32: -0.6095 S33: -0.0323 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 142 THROUGH 173 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6163 78.1328 122.3755 REMARK 3 T TENSOR REMARK 3 T11: 0.1124 T22: 0.1229 REMARK 3 T33: 0.0815 T12: -0.0048 REMARK 3 T13: -0.0424 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 3.6133 L22: 4.5700 REMARK 3 L33: 3.2271 L12: -1.4810 REMARK 3 L13: -0.0348 L23: 0.5636 REMARK 3 S TENSOR REMARK 3 S11: 0.1450 S12: 0.0530 S13: -0.0433 REMARK 3 S21: 0.2889 S22: -0.0469 S23: -0.1591 REMARK 3 S31: 0.2366 S32: 0.0970 S33: -0.0411 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 174 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.7872 86.0535 130.6366 REMARK 3 T TENSOR REMARK 3 T11: 0.2754 T22: 0.3528 REMARK 3 T33: 0.1815 T12: -0.0345 REMARK 3 T13: 0.0581 T23: -0.0893 REMARK 3 L TENSOR REMARK 3 L11: 6.3948 L22: 2.6335 REMARK 3 L33: 2.9773 L12: -2.0253 REMARK 3 L13: 4.0959 L23: -1.1757 REMARK 3 S TENSOR REMARK 3 S11: 0.3208 S12: -0.9200 S13: 0.3965 REMARK 3 S21: 0.5589 S22: -0.0379 S23: 0.2032 REMARK 3 S31: 0.0581 S32: 0.3748 S33: -0.1144 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 186 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.6603 81.6587 129.2548 REMARK 3 T TENSOR REMARK 3 T11: 0.1969 T22: 0.2293 REMARK 3 T33: 0.1878 T12: -0.0379 REMARK 3 T13: -0.0845 T23: -0.0653 REMARK 3 L TENSOR REMARK 3 L11: 6.5547 L22: 2.6235 REMARK 3 L33: 4.3717 L12: -2.8990 REMARK 3 L13: 1.3892 L23: -2.1302 REMARK 3 S TENSOR REMARK 3 S11: 0.1393 S12: -0.2250 S13: 0.2250 REMARK 3 S21: 0.2933 S22: -0.0330 S23: -0.4600 REMARK 3 S31: 0.0839 S32: 0.2041 S33: -0.2247 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4X8Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000205182. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31143 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.729 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.73 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.1 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 0.38300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3L9T REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% (W/V) PEG 3350, 200 MM SODIUM REMARK 280 PHOSPHATE, PH 4.7, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.50800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.74850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.54550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.74850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.50800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.54550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 585 O HOH A 646 2.11 REMARK 500 O HOH A 565 O HOH A 572 2.12 REMARK 500 O HOH A 557 O HOH A 661 2.15 REMARK 500 O HOH A 491 O HOH A 657 2.15 REMARK 500 O HOH A 623 O HOH A 669 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 19 -4.42 -142.06 REMARK 500 TYR A 137 -59.98 71.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 473 O REMARK 620 2 HOH A 506 O 88.2 REMARK 620 3 HOH A 517 O 91.1 177.0 REMARK 620 4 HOH A 521 O 88.9 95.7 87.2 REMARK 620 5 HOH A 523 O 92.2 86.7 90.4 177.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 304 DBREF 4X8Q A 1 206 UNP M2G4T0 M2G4T0_STRMG 1 206 SEQADV 4X8Q GLY A -3 UNP M2G4T0 EXPRESSION TAG SEQADV 4X8Q PRO A -2 UNP M2G4T0 EXPRESSION TAG SEQADV 4X8Q GLY A -1 UNP M2G4T0 EXPRESSION TAG SEQADV 4X8Q SER A 0 UNP M2G4T0 EXPRESSION TAG SEQRES 1 A 210 GLY PRO GLY SER MET LYS GLN TYR VAL ALA ARG LEU GLU SEQRES 2 A 210 LYS ASP PHE SER LEU ILE GLU HIS GLY PHE LYS GLU GLU SEQRES 3 A 210 GLU GLN ARG ALA LEU THR ASP TYR LYS SER ASN ASP GLY SEQRES 4 A 210 GLU TYR ILE LYS LYS LEU ALA PHE LEU ALA TYR GLN SER SEQRES 5 A 210 ASP VAL TYR GLN VAL ARG MET TYR ALA VAL PHE LEU PHE SEQRES 6 A 210 GLY TYR LEU SER LYS ASP LYS GLU ILE LEU ILE PHE MET SEQRES 7 A 210 ARG ASP GLU VAL SER LYS ASP ASN ASN TRP ARG VAL GLN SEQRES 8 A 210 GLU VAL LEU ALA LYS ALA PHE ASP GLU PHE CYS LYS LYS SEQRES 9 A 210 ILE GLY TYR LYS LYS ALA LEU PRO ILE ILE ASP GLU TRP SEQRES 10 A 210 LEU LYS SER SER ASN LEU HIS THR ARG ARG ALA ALA THR SEQRES 11 A 210 GLU GLY LEU ARG ILE TRP THR ASN ARG PRO TYR PHE LYS SEQRES 12 A 210 GLU ASN PRO ASN GLU ALA ILE ARG ARG ILE ALA ASP LEU SEQRES 13 A 210 LYS GLU ASP VAL SER GLU TYR VAL ARG LYS SER VAL GLY SEQRES 14 A 210 ASN ALA LEU ARG ASP ILE SER LYS LYS PHE PRO ASP LEU SEQRES 15 A 210 VAL LYS ILE GLU LEU LYS ASN TRP LYS LEU GLU SER LYS SEQRES 16 A 210 GLU ILE ASN GLN VAL TYR LYS LEU ALA SER LYS PHE ILE SEQRES 17 A 210 ASP ALA HET PO4 A 301 5 HET GOL A 302 6 HET NA A 303 1 HET CL A 304 1 HETNAM PO4 PHOSPHATE ION HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 PO4 O4 P 3- FORMUL 3 GOL C3 H8 O3 FORMUL 4 NA NA 1+ FORMUL 5 CL CL 1- FORMUL 6 HOH *271(H2 O) HELIX 1 AA1 SER A 0 SER A 13 1 14 HELIX 2 AA2 PHE A 19 ASN A 33 1 15 HELIX 3 AA3 ASP A 34 GLN A 47 1 14 HELIX 4 AA4 VAL A 50 SER A 65 1 16 HELIX 5 AA5 ASP A 67 GLU A 77 1 11 HELIX 6 AA6 VAL A 78 ASP A 81 5 4 HELIX 7 AA7 ASN A 83 GLY A 102 1 20 HELIX 8 AA8 ALA A 106 LYS A 115 1 10 HELIX 9 AA9 ASN A 118 LEU A 129 1 12 HELIX 10 AB1 ILE A 131 ARG A 135 5 5 HELIX 11 AB2 ASN A 141 ASP A 151 1 11 HELIX 12 AB3 SER A 157 LYS A 173 1 17 HELIX 13 AB4 PHE A 175 ASN A 185 1 11 HELIX 14 AB5 SER A 190 SER A 201 1 12 LINK NA NA A 303 O HOH A 473 1555 1555 2.47 LINK NA NA A 303 O HOH A 506 1555 1555 2.41 LINK NA NA A 303 O HOH A 517 1555 1555 2.46 LINK NA NA A 303 O HOH A 521 1555 1555 2.37 LINK NA NA A 303 O HOH A 523 1555 1555 2.29 CISPEP 1 ARG A 130 ILE A 131 0 -8.36 SITE 1 AC1 4 HIS A 17 GLY A 18 ARG A 85 HOH A 638 SITE 1 AC2 8 LYS A 68 LEU A 71 ARG A 75 ILE A 109 SITE 2 AC2 8 GLU A 112 TRP A 113 HOH A 581 HOH A 597 SITE 1 AC3 5 HOH A 473 HOH A 506 HOH A 517 HOH A 521 SITE 2 AC3 5 HOH A 523 SITE 1 AC4 3 ILE A 131 ASN A 134 ARG A 135 CRYST1 51.016 65.091 87.497 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019602 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015363 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011429 0.00000