HEADER VIRAL PROTEIN 11-JAN-15 4XKF TITLE CRYSTAL STRUCTURE OF HEMAGGLUTININ FROM TAIWAN (2013) H6N1 INFLUENZA TITLE 2 VIRUS IN COMPLEX WITH LSTA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ HA1 CHAIN; COMPND 3 CHAIN: A, C, E; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HEMAGGLUTININ HA2 CHAIN; COMPND 7 CHAIN: B, D, F; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 119212; SOURCE 4 STRAIN: A/TAIWAN/2/2013(H6N1); SOURCE 5 GENE: HA; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HI5; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 11 EXPRESSION_SYSTEM_VECTOR: PFASTBAC-HT; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 14 ORGANISM_TAXID: 119212; SOURCE 15 STRAIN: A/TAIWAN/2/2013(H6N1); SOURCE 16 GENE: HA; SOURCE 17 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 18 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 20 EXPRESSION_SYSTEM_STRAIN: HI5; SOURCE 21 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 22 EXPRESSION_SYSTEM_VECTOR: PFASTBAC-HT KEYWDS VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.TZARUM,X.ZHU,I.A.WILSON REVDAT 5 27-SEP-23 4XKF 1 HETSYN LINK REVDAT 4 29-JUL-20 4XKF 1 COMPND REMARK HETNAM SSBOND REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 22-NOV-17 4XKF 1 SOURCE REMARK REVDAT 2 01-APR-15 4XKF 1 JRNL REVDAT 1 25-MAR-15 4XKF 0 JRNL AUTH N.TZARUM,R.P.DE VRIES,X.ZHU,W.YU,R.MCBRIDE,J.C.PAULSON, JRNL AUTH 2 I.A.WILSON JRNL TITL STRUCTURE AND RECEPTOR BINDING OF THE HEMAGGLUTININ FROM A JRNL TITL 2 HUMAN H6N1 INFLUENZA VIRUS. JRNL REF CELL HOST MICROBE V. 17 369 2015 JRNL REFN ESSN 1934-6069 JRNL PMID 25766295 JRNL DOI 10.1016/J.CHOM.2015.02.005 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 71268 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 3599 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.6457 - 7.2393 1.00 2691 167 0.2446 0.2428 REMARK 3 2 7.2393 - 5.7488 1.00 2662 146 0.2357 0.2532 REMARK 3 3 5.7488 - 5.0229 1.00 2637 141 0.1944 0.2481 REMARK 3 4 5.0229 - 4.5640 1.00 2658 141 0.1604 0.1878 REMARK 3 5 4.5640 - 4.2371 1.00 2635 148 0.1574 0.1778 REMARK 3 6 4.2371 - 3.9874 1.00 2631 149 0.1686 0.2260 REMARK 3 7 3.9874 - 3.7878 1.00 2622 145 0.1840 0.2146 REMARK 3 8 3.7878 - 3.6229 1.00 2616 136 0.1919 0.2600 REMARK 3 9 3.6229 - 3.4835 1.00 2637 130 0.1998 0.2511 REMARK 3 10 3.4835 - 3.3633 1.00 2668 136 0.2175 0.2713 REMARK 3 11 3.3633 - 3.2582 1.00 2640 121 0.2176 0.2544 REMARK 3 12 3.2582 - 3.1651 1.00 2602 155 0.2236 0.2901 REMARK 3 13 3.1651 - 3.0818 1.00 2625 127 0.2203 0.3170 REMARK 3 14 3.0818 - 3.0066 1.00 2618 143 0.2249 0.2684 REMARK 3 15 3.0066 - 2.9382 1.00 2620 149 0.2230 0.2720 REMARK 3 16 2.9382 - 2.8757 1.00 2614 153 0.2296 0.2787 REMARK 3 17 2.8757 - 2.8182 1.00 2621 122 0.2253 0.2814 REMARK 3 18 2.8182 - 2.7650 1.00 2580 155 0.2313 0.2688 REMARK 3 19 2.7650 - 2.7156 1.00 2671 121 0.2336 0.3070 REMARK 3 20 2.7156 - 2.6696 1.00 2607 138 0.2531 0.3514 REMARK 3 21 2.6696 - 2.6266 0.99 2587 135 0.2565 0.3280 REMARK 3 22 2.6266 - 2.5861 0.99 2594 137 0.2620 0.3513 REMARK 3 23 2.5861 - 2.5481 0.98 2529 141 0.2773 0.3257 REMARK 3 24 2.5481 - 2.5122 0.96 2532 130 0.2666 0.3424 REMARK 3 25 2.5122 - 2.4783 0.95 2491 121 0.2681 0.3513 REMARK 3 26 2.4783 - 2.4461 0.86 2281 112 0.2921 0.3480 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 12316 REMARK 3 ANGLE : 1.567 16682 REMARK 3 CHIRALITY : 0.078 1813 REMARK 3 PLANARITY : 0.016 2159 REMARK 3 DIHEDRAL : 15.147 4486 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XKF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000205828. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03320 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 705B REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71296 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.446 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.44800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4XKD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10MM NICL2, 0.1M TRIS PH 8.5, 20% REMARK 280 (W/V) MPEG 2000 AND 20% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 92.86750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.63550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 92.86750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 49.63550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 31310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 61290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -136.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 7 REMARK 465 ASP A 8 REMARK 465 LYS A 263B REMARK 465 ARG A 329 REMARK 465 GLU B 174 REMARK 465 GLY B 175 REMARK 465 ARG B 176 REMARK 465 LEU B 177 REMARK 465 VAL B 178 REMARK 465 PRO B 179 REMARK 465 ARG B 180 REMARK 465 ALA C 7 REMARK 465 ASP C 8 REMARK 465 PRO C 9 REMARK 465 THR C 262A REMARK 465 ASN C 262B REMARK 465 LYS C 262C REMARK 465 ARG C 329 REMARK 465 GLU D 174 REMARK 465 GLY D 175 REMARK 465 ARG D 176 REMARK 465 LEU D 177 REMARK 465 VAL D 178 REMARK 465 PRO D 179 REMARK 465 ARG D 180 REMARK 465 ALA E 7 REMARK 465 ASP E 8 REMARK 465 THR E 262A REMARK 465 ASN E 262B REMARK 465 ILE E 326 REMARK 465 ALA E 327 REMARK 465 THR E 328 REMARK 465 ARG E 329 REMARK 465 ILE F 173 REMARK 465 GLU F 174 REMARK 465 GLY F 175 REMARK 465 ARG F 176 REMARK 465 LEU F 177 REMARK 465 VAL F 178 REMARK 465 PRO F 179 REMARK 465 ARG F 180 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR E 136 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY B 134 O HOH B 202 1.74 REMARK 500 O GLY F 172 O HOH F 315 1.86 REMARK 500 OD1 ASP F 19 O HOH F 301 1.88 REMARK 500 OD1 ASP D 67 O HOH D 306 1.98 REMARK 500 O ILE E 154 O HOH E 506 1.98 REMARK 500 ND2 ASN F 154 O5 NAG F 201 2.02 REMARK 500 ND2 ASN D 154 O5 NAG D 201 2.07 REMARK 500 OD1 ASP F 128 OH TYR F 159 2.08 REMARK 500 O3 NAG G 1 O5 GAL G 2 2.09 REMARK 500 O THR C 160 O HOH C 439 2.10 REMARK 500 OH TYR F 94 O HOH F 304 2.10 REMARK 500 O HOH F 303 O HOH F 316 2.11 REMARK 500 ND2 ASN E 169 O5 NAG E 402 2.11 REMARK 500 NE2 HIS F 25 O HOH F 303 2.12 REMARK 500 NZ LYS F 51 OG1 THR F 107 2.14 REMARK 500 O THR E 131 O HOH E 513 2.15 REMARK 500 O ILE C 154 O HOH C 408 2.17 REMARK 500 N ARG B 75 OE2 GLU E 107 2.18 REMARK 500 O3 NAG G 1 C2 GAL G 2 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O ALA A 327 OD1 ASN C 137 3555 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL C 135 CB VAL C 135 CG2 -0.128 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 12 CD - CE - NZ ANGL. DEV. = 18.1 DEGREES REMARK 500 LEU A 186 CA - C - N ANGL. DEV. = 20.9 DEGREES REMARK 500 LEU A 186 O - C - N ANGL. DEV. = -20.9 DEGREES REMARK 500 ASP A 187 C - N - CA ANGL. DEV. = 36.8 DEGREES REMARK 500 ASP A 187 CA - C - N ANGL. DEV. = -24.4 DEGREES REMARK 500 ASP A 187 O - C - N ANGL. DEV. = 25.0 DEGREES REMARK 500 GLY B 1 N - CA - C ANGL. DEV. = -21.4 DEGREES REMARK 500 LYS C 12 CD - CE - NZ ANGL. DEV. = 15.2 DEGREES REMARK 500 GLN C 46 O - C - N ANGL. DEV. = -12.9 DEGREES REMARK 500 LYS C 47 C - N - CA ANGL. DEV. = 19.5 DEGREES REMARK 500 GLY D 1 N - CA - C ANGL. DEV. = -16.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 62 -129.81 61.66 REMARK 500 GLU A 116 -50.87 -127.83 REMARK 500 THR A 143 -15.53 -144.67 REMARK 500 SER A 146 -159.60 -144.98 REMARK 500 TYR A 195 -158.99 -127.93 REMARK 500 ALA A 218 146.21 -173.64 REMARK 500 TRP A 255 -62.05 -121.72 REMARK 500 SER A 298 142.34 -172.17 REMARK 500 ALA B 5 -62.32 -93.05 REMARK 500 ASN B 60 33.67 -91.75 REMARK 500 ARG B 127 -129.97 56.35 REMARK 500 ASN C 33 75.27 -105.34 REMARK 500 LYS C 62 -120.93 58.16 REMARK 500 SER C 146 -160.85 -128.90 REMARK 500 TRP C 255 -64.29 -124.94 REMARK 500 ALA D 5 -71.55 -82.60 REMARK 500 ARG D 127 -133.31 46.85 REMARK 500 ASN E 21 5.57 -69.81 REMARK 500 ILE E 54 -87.27 -104.64 REMARK 500 LYS E 62 -70.75 70.66 REMARK 500 LEU E 78 42.68 -106.32 REMARK 500 TYR E 86 164.88 174.82 REMARK 500 ALA E 93 129.67 -37.76 REMARK 500 SER E 146 -158.22 -134.42 REMARK 500 ASN E 276 37.90 -85.73 REMARK 500 ASP F 67 66.09 60.66 REMARK 500 ARG F 127 -130.24 56.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 114 GLY A 115 35.48 REMARK 500 GLY C 134 VAL C 135 -32.39 REMARK 500 ASP E 77 LEU E 78 60.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LYS C 47 10.85 REMARK 500 ASP E 77 13.61 REMARK 500 REMARK 500 REMARK: NULL DBREF 4XKF A 7 329 PDB 4XKF 4XKF 7 329 DBREF 4XKF B 1 180 PDB 4XKF 4XKF 1 180 DBREF 4XKF C 7 329 PDB 4XKF 4XKF 7 329 DBREF 4XKF D 1 180 PDB 4XKF 4XKF 1 180 DBREF 4XKF E 7 329 PDB 4XKF 4XKF 7 329 DBREF 4XKF F 1 180 PDB 4XKF 4XKF 1 180 SEQRES 1 A 333 ALA ASP PRO GLY ASP LYS ILE CYS ILE GLY TYR HIS ALA SEQRES 2 A 333 ASN ASN SER THR THR GLN VAL ASP THR LEU LEU GLU LYS SEQRES 3 A 333 ASN VAL THR VAL THR HIS SER VAL GLU LEU LEU GLU ASN SEQRES 4 A 333 GLN LYS GLU LYS ARG PHE CYS LYS ILE MET ASN LYS ALA SEQRES 5 A 333 PRO LEU ASP LEU LYS ASP CYS THR ILE GLU GLY TRP ILE SEQRES 6 A 333 LEU GLY ASN PRO LYS CYS ASP LEU LEU LEU GLY ASP GLN SEQRES 7 A 333 SER TRP SER TYR ILE VAL GLU ARG PRO ASN ALA GLN ASN SEQRES 8 A 333 GLY ILE CYS TYR PRO GLY VAL LEU ASN GLU LEU GLU GLU SEQRES 9 A 333 LEU LYS ALA PHE ILE GLY SER GLY GLU ARG VAL GLU ARG SEQRES 10 A 333 PHE GLU MET PHE PRO LYS SER THR TRP ALA GLY VAL ASP SEQRES 11 A 333 THR SER ARG GLY VAL THR ASN ALA CYS PRO SER TYR THR SEQRES 12 A 333 ILE ASP SER SER PHE TYR ARG ASN LEU VAL TRP ILE VAL SEQRES 13 A 333 LYS THR ASP SER ALA THR TYR PRO VAL ILE LYS GLY THR SEQRES 14 A 333 TYR ASN ASN THR GLY THR GLN PRO ILE LEU TYR PHE TRP SEQRES 15 A 333 GLY VAL HIS HIS PRO LEU ASP THR THR VAL GLN ASP ASN SEQRES 16 A 333 LEU TYR GLY SER GLY ASP LYS TYR VAL ARG MET GLY THR SEQRES 17 A 333 GLU SER MET ASN PHE ALA LYS SER PRO GLU ILE ALA ALA SEQRES 18 A 333 ARG PRO ALA VAL ASN GLY GLN ARG SER ARG ILE ASP TYR SEQRES 19 A 333 TYR TRP SER VAL LEU ARG PRO GLY GLU THR LEU ASN VAL SEQRES 20 A 333 GLU SER ASN GLY ASN LEU ILE ALA PRO TRP TYR ALA TYR SEQRES 21 A 333 LYS PHE VAL SER THR ASN LYS LYS GLY ALA VAL PHE LYS SEQRES 22 A 333 SER ASP LEU PRO ILE GLU ASN CYS ASP ALA THR CYS GLN SEQRES 23 A 333 THR ILE THR GLY VAL LEU ARG THR ASN LYS THR PHE GLN SEQRES 24 A 333 ASN VAL SER PRO LEU TRP ILE GLY GLU CYS PRO LYS TYR SEQRES 25 A 333 VAL LYS SER GLU SER LEU ARG LEU ALA THR GLY LEU ARG SEQRES 26 A 333 ASN VAL PRO GLN ILE ALA THR ARG SEQRES 1 B 180 GLY ILE PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY SEQRES 2 B 180 TRP THR GLY MET ILE ASP GLY TRP TYR GLY TYR HIS HIS SEQRES 3 B 180 GLU ASN SER GLN GLY SER GLY TYR ALA ALA ASP ARG GLU SEQRES 4 B 180 SER THR GLN LYS ALA ILE ASP GLY ILE THR ASN LYS VAL SEQRES 5 B 180 ASN SER ILE ILE ASN LYS MET ASN THR GLN PHE GLU ALA SEQRES 6 B 180 VAL ASP HIS GLU PHE SER ASN LEU GLU ARG ARG ILE GLY SEQRES 7 B 180 ASN LEU ASN LYS ARG MET GLU ASP GLY PHE LEU ASP VAL SEQRES 8 B 180 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU LEU GLU ASN SEQRES 9 B 180 GLU ARG THR LEU ASP LEU HIS ASP ALA ASN VAL LYS ASN SEQRES 10 B 180 LEU TYR GLU LYS VAL LYS SER GLN LEU ARG ASP ASN ALA SEQRES 11 B 180 ASN ASP LEU GLY ASN GLY CYS PHE GLU PHE TRP HIS LYS SEQRES 12 B 180 CYS ASP ASN GLU CYS MET GLU SER VAL LYS ASN GLY THR SEQRES 13 B 180 TYR ASP TYR PRO LYS TYR GLN LYS GLU SER LYS LEU ASN SEQRES 14 B 180 ARG GLN GLY ILE GLU GLY ARG LEU VAL PRO ARG SEQRES 1 C 333 ALA ASP PRO GLY ASP LYS ILE CYS ILE GLY TYR HIS ALA SEQRES 2 C 333 ASN ASN SER THR THR GLN VAL ASP THR LEU LEU GLU LYS SEQRES 3 C 333 ASN VAL THR VAL THR HIS SER VAL GLU LEU LEU GLU ASN SEQRES 4 C 333 GLN LYS GLU LYS ARG PHE CYS LYS ILE MET ASN LYS ALA SEQRES 5 C 333 PRO LEU ASP LEU LYS ASP CYS THR ILE GLU GLY TRP ILE SEQRES 6 C 333 LEU GLY ASN PRO LYS CYS ASP LEU LEU LEU GLY ASP GLN SEQRES 7 C 333 SER TRP SER TYR ILE VAL GLU ARG PRO ASN ALA GLN ASN SEQRES 8 C 333 GLY ILE CYS TYR PRO GLY VAL LEU ASN GLU LEU GLU GLU SEQRES 9 C 333 LEU LYS ALA PHE ILE GLY SER GLY GLU ARG VAL GLU ARG SEQRES 10 C 333 PHE GLU MET PHE PRO LYS SER THR TRP ALA GLY VAL ASP SEQRES 11 C 333 THR SER ARG GLY VAL THR ASN ALA CYS PRO SER TYR THR SEQRES 12 C 333 ILE ASP SER SER PHE TYR ARG ASN LEU VAL TRP ILE VAL SEQRES 13 C 333 LYS THR ASP SER ALA THR TYR PRO VAL ILE LYS GLY THR SEQRES 14 C 333 TYR ASN ASN THR GLY THR GLN PRO ILE LEU TYR PHE TRP SEQRES 15 C 333 GLY VAL HIS HIS PRO LEU ASP THR THR VAL GLN ASP ASN SEQRES 16 C 333 LEU TYR GLY SER GLY ASP LYS TYR VAL ARG MET GLY THR SEQRES 17 C 333 GLU SER MET ASN PHE ALA LYS SER PRO GLU ILE ALA ALA SEQRES 18 C 333 ARG PRO ALA VAL ASN GLY GLN ARG SER ARG ILE ASP TYR SEQRES 19 C 333 TYR TRP SER VAL LEU ARG PRO GLY GLU THR LEU ASN VAL SEQRES 20 C 333 GLU SER ASN GLY ASN LEU ILE ALA PRO TRP TYR ALA TYR SEQRES 21 C 333 LYS PHE VAL SER THR ASN LYS LYS GLY ALA VAL PHE LYS SEQRES 22 C 333 SER ASP LEU PRO ILE GLU ASN CYS ASP ALA THR CYS GLN SEQRES 23 C 333 THR ILE THR GLY VAL LEU ARG THR ASN LYS THR PHE GLN SEQRES 24 C 333 ASN VAL SER PRO LEU TRP ILE GLY GLU CYS PRO LYS TYR SEQRES 25 C 333 VAL LYS SER GLU SER LEU ARG LEU ALA THR GLY LEU ARG SEQRES 26 C 333 ASN VAL PRO GLN ILE ALA THR ARG SEQRES 1 D 180 GLY ILE PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY SEQRES 2 D 180 TRP THR GLY MET ILE ASP GLY TRP TYR GLY TYR HIS HIS SEQRES 3 D 180 GLU ASN SER GLN GLY SER GLY TYR ALA ALA ASP ARG GLU SEQRES 4 D 180 SER THR GLN LYS ALA ILE ASP GLY ILE THR ASN LYS VAL SEQRES 5 D 180 ASN SER ILE ILE ASN LYS MET ASN THR GLN PHE GLU ALA SEQRES 6 D 180 VAL ASP HIS GLU PHE SER ASN LEU GLU ARG ARG ILE GLY SEQRES 7 D 180 ASN LEU ASN LYS ARG MET GLU ASP GLY PHE LEU ASP VAL SEQRES 8 D 180 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU LEU GLU ASN SEQRES 9 D 180 GLU ARG THR LEU ASP LEU HIS ASP ALA ASN VAL LYS ASN SEQRES 10 D 180 LEU TYR GLU LYS VAL LYS SER GLN LEU ARG ASP ASN ALA SEQRES 11 D 180 ASN ASP LEU GLY ASN GLY CYS PHE GLU PHE TRP HIS LYS SEQRES 12 D 180 CYS ASP ASN GLU CYS MET GLU SER VAL LYS ASN GLY THR SEQRES 13 D 180 TYR ASP TYR PRO LYS TYR GLN LYS GLU SER LYS LEU ASN SEQRES 14 D 180 ARG GLN GLY ILE GLU GLY ARG LEU VAL PRO ARG SEQRES 1 E 333 ALA ASP PRO GLY ASP LYS ILE CYS ILE GLY TYR HIS ALA SEQRES 2 E 333 ASN ASN SER THR THR GLN VAL ASP THR LEU LEU GLU LYS SEQRES 3 E 333 ASN VAL THR VAL THR HIS SER VAL GLU LEU LEU GLU ASN SEQRES 4 E 333 GLN LYS GLU LYS ARG PHE CYS LYS ILE MET ASN LYS ALA SEQRES 5 E 333 PRO LEU ASP LEU LYS ASP CYS THR ILE GLU GLY TRP ILE SEQRES 6 E 333 LEU GLY ASN PRO LYS CYS ASP LEU LEU LEU GLY ASP GLN SEQRES 7 E 333 SER TRP SER TYR ILE VAL GLU ARG PRO ASN ALA GLN ASN SEQRES 8 E 333 GLY ILE CYS TYR PRO GLY VAL LEU ASN GLU LEU GLU GLU SEQRES 9 E 333 LEU LYS ALA PHE ILE GLY SER GLY GLU ARG VAL GLU ARG SEQRES 10 E 333 PHE GLU MET PHE PRO LYS SER THR TRP ALA GLY VAL ASP SEQRES 11 E 333 THR SER ARG GLY VAL THR ASN ALA CYS PRO SER TYR THR SEQRES 12 E 333 ILE ASP SER SER PHE TYR ARG ASN LEU VAL TRP ILE VAL SEQRES 13 E 333 LYS THR ASP SER ALA THR TYR PRO VAL ILE LYS GLY THR SEQRES 14 E 333 TYR ASN ASN THR GLY THR GLN PRO ILE LEU TYR PHE TRP SEQRES 15 E 333 GLY VAL HIS HIS PRO LEU ASP THR THR VAL GLN ASP ASN SEQRES 16 E 333 LEU TYR GLY SER GLY ASP LYS TYR VAL ARG MET GLY THR SEQRES 17 E 333 GLU SER MET ASN PHE ALA LYS SER PRO GLU ILE ALA ALA SEQRES 18 E 333 ARG PRO ALA VAL ASN GLY GLN ARG SER ARG ILE ASP TYR SEQRES 19 E 333 TYR TRP SER VAL LEU ARG PRO GLY GLU THR LEU ASN VAL SEQRES 20 E 333 GLU SER ASN GLY ASN LEU ILE ALA PRO TRP TYR ALA TYR SEQRES 21 E 333 LYS PHE VAL SER THR ASN LYS LYS GLY ALA VAL PHE LYS SEQRES 22 E 333 SER ASP LEU PRO ILE GLU ASN CYS ASP ALA THR CYS GLN SEQRES 23 E 333 THR ILE THR GLY VAL LEU ARG THR ASN LYS THR PHE GLN SEQRES 24 E 333 ASN VAL SER PRO LEU TRP ILE GLY GLU CYS PRO LYS TYR SEQRES 25 E 333 VAL LYS SER GLU SER LEU ARG LEU ALA THR GLY LEU ARG SEQRES 26 E 333 ASN VAL PRO GLN ILE ALA THR ARG SEQRES 1 F 180 GLY ILE PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY SEQRES 2 F 180 TRP THR GLY MET ILE ASP GLY TRP TYR GLY TYR HIS HIS SEQRES 3 F 180 GLU ASN SER GLN GLY SER GLY TYR ALA ALA ASP ARG GLU SEQRES 4 F 180 SER THR GLN LYS ALA ILE ASP GLY ILE THR ASN LYS VAL SEQRES 5 F 180 ASN SER ILE ILE ASN LYS MET ASN THR GLN PHE GLU ALA SEQRES 6 F 180 VAL ASP HIS GLU PHE SER ASN LEU GLU ARG ARG ILE GLY SEQRES 7 F 180 ASN LEU ASN LYS ARG MET GLU ASP GLY PHE LEU ASP VAL SEQRES 8 F 180 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU LEU GLU ASN SEQRES 9 F 180 GLU ARG THR LEU ASP LEU HIS ASP ALA ASN VAL LYS ASN SEQRES 10 F 180 LEU TYR GLU LYS VAL LYS SER GLN LEU ARG ASP ASN ALA SEQRES 11 F 180 ASN ASP LEU GLY ASN GLY CYS PHE GLU PHE TRP HIS LYS SEQRES 12 F 180 CYS ASP ASN GLU CYS MET GLU SER VAL LYS ASN GLY THR SEQRES 13 F 180 TYR ASP TYR PRO LYS TYR GLN LYS GLU SER LYS LEU ASN SEQRES 14 F 180 ARG GLN GLY ILE GLU GLY ARG LEU VAL PRO ARG HET NAG G 1 15 HET GAL G 2 11 HET SIA G 3 20 HET NAG A 401 14 HET NAG A 402 14 HET NAG D 201 14 HET NAG E 401 14 HET NAG E 402 14 HET NAG F 201 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM SIA N-ACETYL-ALPHA-NEURAMINIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN SIA N-ACETYLNEURAMINIC ACID; SIALIC ACID; ALPHA-SIALIC HETSYN 2 SIA ACID; O-SIALIC ACID FORMUL 7 NAG 7(C8 H15 N O6) FORMUL 7 GAL C6 H12 O6 FORMUL 7 SIA C11 H19 N O9 FORMUL 14 HOH *140(H2 O) HELIX 1 AA1 THR A 65 GLY A 72 1 8 HELIX 2 AA2 ASN A 73 LEU A 80 5 8 HELIX 3 AA3 GLU A 104 SER A 114 1 11 HELIX 4 AA4 PRO A 125 TRP A 127 5 5 HELIX 5 AA5 ASP A 187 TYR A 195 1 9 HELIX 6 AA6 ASP B 37 MET B 59 1 23 HELIX 7 AA7 GLU B 74 ARG B 127 1 54 HELIX 8 AA8 ASP B 145 GLY B 155 1 11 HELIX 9 AA9 ASP B 158 ILE B 173 1 16 HELIX 10 AB1 THR C 65 GLY C 72 1 8 HELIX 11 AB2 ASN C 73 LEU C 80 5 8 HELIX 12 AB3 GLU C 104 SER C 114 1 11 HELIX 13 AB4 PRO C 125 TRP C 127 5 5 HELIX 14 AB5 ASP C 187 TYR C 195 1 9 HELIX 15 AB6 ASP D 37 MET D 59 1 23 HELIX 16 AB7 GLU D 74 ARG D 127 1 54 HELIX 17 AB8 ASP D 145 ASN D 154 1 10 HELIX 18 AB9 ASP D 158 GLN D 171 1 14 HELIX 19 AC1 THR E 65 GLY E 72 1 8 HELIX 20 AC2 ASN E 73 ASP E 77 5 5 HELIX 21 AC3 GLU E 104 SER E 114 1 11 HELIX 22 AC4 PRO E 125 TRP E 127 5 5 HELIX 23 AC5 ASP E 187 TYR E 195 1 9 HELIX 24 AC6 ASP F 37 MET F 59 1 23 HELIX 25 AC7 GLU F 74 ARG F 127 1 54 HELIX 26 AC8 ASP F 145 GLY F 155 1 11 HELIX 27 AC9 ASP F 158 GLY F 172 1 15 SHEET 1 AA1 5 GLY B 31 ALA B 36 0 SHEET 2 AA1 5 TYR B 22 ASN B 28 -1 N ASN B 28 O GLY B 31 SHEET 3 AA1 5 LYS A 12 TYR A 17 -1 N CYS A 14 O HIS B 25 SHEET 4 AA1 5 CYS B 137 PHE B 140 -1 O PHE B 138 N ILE A 13 SHEET 5 AA1 5 ALA B 130 ASP B 132 -1 N ASN B 131 O GLU B 139 SHEET 1 AA2 2 GLN A 25 VAL A 26 0 SHEET 2 AA2 2 VAL A 34 THR A 35 -1 O VAL A 34 N VAL A 26 SHEET 1 AA3 2 SER A 39 GLU A 41 0 SHEET 2 AA3 2 ARG A 315 ALA A 317 -1 O LEU A 316 N VAL A 40 SHEET 1 AA4 3 LEU A 43 GLU A 44 0 SHEET 2 AA4 3 PHE A 294 GLN A 295 1 O PHE A 294 N GLU A 44 SHEET 3 AA4 3 LYS A 307 TYR A 308 1 O LYS A 307 N GLN A 295 SHEET 1 AA5 2 PHE A 51 ILE A 54 0 SHEET 2 AA5 2 ILE A 274 ALA A 279 1 O CYS A 277 N LYS A 53 SHEET 1 AA6 3 LEU A 59 ASP A 60 0 SHEET 2 AA6 3 ILE A 87 GLU A 89 1 O VAL A 88 N LEU A 59 SHEET 3 AA6 3 VAL A 267 LYS A 269 1 O PHE A 268 N ILE A 87 SHEET 1 AA7 6 GLN A 82 SER A 83 0 SHEET 2 AA7 6 GLY A 115 GLU A 122 -1 O VAL A 118 N GLN A 82 SHEET 3 AA7 6 TYR A 256 SER A 262 -1 O VAL A 261 N ARG A 117 SHEET 4 AA7 6 ILE A 176 HIS A 184 -1 N LEU A 177 O TYR A 258 SHEET 5 AA7 6 LEU A 251 PRO A 254 -1 O ILE A 252 N GLY A 181 SHEET 6 AA7 6 LEU A 151 TRP A 153 -1 N VAL A 152 O ALA A 253 SHEET 1 AA8 5 GLN A 82 SER A 83 0 SHEET 2 AA8 5 GLY A 115 GLU A 122 -1 O VAL A 118 N GLN A 82 SHEET 3 AA8 5 TYR A 256 SER A 262 -1 O VAL A 261 N ARG A 117 SHEET 4 AA8 5 ILE A 176 HIS A 184 -1 N LEU A 177 O TYR A 258 SHEET 5 AA8 5 ARG A 229 LEU A 237 -1 O ARG A 229 N HIS A 184 SHEET 1 AA9 2 VAL A 130 ASP A 130A 0 SHEET 2 AA9 2 VAL A 155 LYS A 156 -1 O VAL A 155 N ASP A 130A SHEET 1 AB1 4 ILE A 164 ASN A 169 0 SHEET 2 AB1 4 THR A 242 SER A 247 -1 O LEU A 243 N TYR A 168 SHEET 3 AB1 4 VAL A 202 GLY A 205 -1 N ARG A 203 O GLU A 246 SHEET 4 AB1 4 ASN A 210 LYS A 213 -1 O PHE A 211 N MET A 204 SHEET 1 AB2 3 GLY A 286 LEU A 288 0 SHEET 2 AB2 3 CYS A 281 THR A 283 -1 N THR A 283 O GLY A 286 SHEET 3 AB2 3 TRP A 301 GLY A 303 -1 O ILE A 302 N GLN A 282 SHEET 1 AB3 5 GLY D 31 ALA D 36 0 SHEET 2 AB3 5 TYR D 22 ASN D 28 -1 N ASN D 28 O GLY D 31 SHEET 3 AB3 5 LYS C 12 TYR C 17 -1 N GLY C 16 O GLY D 23 SHEET 4 AB3 5 CYS D 137 PHE D 140 -1 O PHE D 138 N ILE C 13 SHEET 5 AB3 5 ALA D 130 ASP D 132 -1 N ASN D 131 O GLU D 139 SHEET 1 AB4 2 GLN C 25 VAL C 26 0 SHEET 2 AB4 2 VAL C 34 THR C 35 -1 O VAL C 34 N VAL C 26 SHEET 1 AB5 2 SER C 39 GLU C 41 0 SHEET 2 AB5 2 ARG C 315 ALA C 317 -1 O LEU C 316 N VAL C 40 SHEET 1 AB6 3 LEU C 43 GLU C 44 0 SHEET 2 AB6 3 PHE C 294 GLN C 295 1 O PHE C 294 N GLU C 44 SHEET 3 AB6 3 LYS C 307 TYR C 308 1 O LYS C 307 N GLN C 295 SHEET 1 AB7 2 PHE C 51 ILE C 54 0 SHEET 2 AB7 2 ILE C 274 ALA C 279 1 O ALA C 279 N LYS C 53 SHEET 1 AB8 3 LEU C 59 ASP C 60 0 SHEET 2 AB8 3 ILE C 87 GLU C 89 1 O VAL C 88 N LEU C 59 SHEET 3 AB8 3 VAL C 267 LYS C 269 1 O PHE C 268 N ILE C 87 SHEET 1 AB9 6 GLN C 82 SER C 83 0 SHEET 2 AB9 6 ARG C 117 GLU C 122 -1 O VAL C 118 N GLN C 82 SHEET 3 AB9 6 TYR C 256 VAL C 261 -1 O VAL C 261 N ARG C 117 SHEET 4 AB9 6 ILE C 176 HIS C 184 -1 N LEU C 177 O TYR C 258 SHEET 5 AB9 6 ARG C 229 LEU C 237 -1 O ARG C 229 N HIS C 184 SHEET 6 AB9 6 GLY C 100 LEU C 102 1 N VAL C 101 O TYR C 232 SHEET 1 AC1 6 GLN C 82 SER C 83 0 SHEET 2 AC1 6 ARG C 117 GLU C 122 -1 O VAL C 118 N GLN C 82 SHEET 3 AC1 6 TYR C 256 VAL C 261 -1 O VAL C 261 N ARG C 117 SHEET 4 AC1 6 ILE C 176 HIS C 184 -1 N LEU C 177 O TYR C 258 SHEET 5 AC1 6 LEU C 251 PRO C 254 -1 O ILE C 252 N GLY C 181 SHEET 6 AC1 6 LEU C 151 TRP C 153 -1 N VAL C 152 O ALA C 253 SHEET 1 AC2 2 VAL C 130 ASP C 130A 0 SHEET 2 AC2 2 VAL C 155 LYS C 156 -1 O VAL C 155 N ASP C 130A SHEET 1 AC3 4 ILE C 164 ASN C 169 0 SHEET 2 AC3 4 THR C 242 SER C 247 -1 O VAL C 245 N GLY C 166 SHEET 3 AC3 4 VAL C 202 GLY C 205 -1 N ARG C 203 O GLU C 246 SHEET 4 AC3 4 ASN C 210 LYS C 213 -1 O LYS C 213 N VAL C 202 SHEET 1 AC4 3 GLY C 286 VAL C 287 0 SHEET 2 AC4 3 CYS C 281 THR C 283 -1 N THR C 283 O GLY C 286 SHEET 3 AC4 3 TRP C 301 GLY C 303 -1 O ILE C 302 N GLN C 282 SHEET 1 AC5 5 GLY F 31 ALA F 36 0 SHEET 2 AC5 5 TYR F 22 ASN F 28 -1 N TYR F 24 O ALA F 35 SHEET 3 AC5 5 LYS E 12 TYR E 17 -1 N CYS E 14 O HIS F 25 SHEET 4 AC5 5 CYS F 137 PHE F 140 -1 O PHE F 138 N ILE E 13 SHEET 5 AC5 5 ALA F 130 ASP F 132 -1 N ASN F 131 O GLU F 139 SHEET 1 AC6 2 GLN E 25 VAL E 26 0 SHEET 2 AC6 2 VAL E 34 THR E 35 -1 O VAL E 34 N VAL E 26 SHEET 1 AC7 2 SER E 39 GLU E 41 0 SHEET 2 AC7 2 ARG E 315 ALA E 317 -1 O LEU E 316 N VAL E 40 SHEET 1 AC8 3 LEU E 43 GLU E 44 0 SHEET 2 AC8 3 PHE E 294 GLN E 295 1 O PHE E 294 N GLU E 44 SHEET 3 AC8 3 LYS E 307 TYR E 308 1 O LYS E 307 N GLN E 295 SHEET 1 AC9 2 PHE E 51 LYS E 53 0 SHEET 2 AC9 2 ILE E 274 ASP E 278 1 O CYS E 277 N LYS E 53 SHEET 1 AD1 3 LEU E 59 ASP E 60 0 SHEET 2 AD1 3 ILE E 87 GLU E 89 1 O VAL E 88 N LEU E 59 SHEET 3 AD1 3 VAL E 267 LYS E 269 1 O PHE E 268 N ILE E 87 SHEET 1 AD2 6 GLN E 82 SER E 83 0 SHEET 2 AD2 6 ARG E 117 GLU E 122 -1 O VAL E 118 N GLN E 82 SHEET 3 AD2 6 TYR E 256 VAL E 261 -1 O VAL E 261 N ARG E 117 SHEET 4 AD2 6 ILE E 176 HIS E 184 -1 N LEU E 177 O TYR E 258 SHEET 5 AD2 6 ARG E 229 LEU E 237 -1 O TYR E 233 N TRP E 180 SHEET 6 AD2 6 GLY E 100 LEU E 102 1 N VAL E 101 O TYR E 232 SHEET 1 AD3 6 GLN E 82 SER E 83 0 SHEET 2 AD3 6 ARG E 117 GLU E 122 -1 O VAL E 118 N GLN E 82 SHEET 3 AD3 6 TYR E 256 VAL E 261 -1 O VAL E 261 N ARG E 117 SHEET 4 AD3 6 ILE E 176 HIS E 184 -1 N LEU E 177 O TYR E 258 SHEET 5 AD3 6 LEU E 251 PRO E 254 -1 O ILE E 252 N GLY E 181 SHEET 6 AD3 6 LEU E 151 TRP E 153 -1 N VAL E 152 O ALA E 253 SHEET 1 AD4 4 ILE E 164 ASN E 169 0 SHEET 2 AD4 4 THR E 242 SER E 247 -1 O LEU E 243 N TYR E 168 SHEET 3 AD4 4 VAL E 202 GLY E 205 -1 N GLY E 205 O ASN E 244 SHEET 4 AD4 4 ASN E 210 LYS E 213 -1 O PHE E 211 N MET E 204 SHEET 1 AD5 3 GLY E 286 LEU E 288 0 SHEET 2 AD5 3 CYS E 281 THR E 283 -1 N CYS E 281 O LEU E 288 SHEET 3 AD5 3 TRP E 301 GLY E 303 -1 O ILE E 302 N GLN E 282 SSBOND 1 CYS A 14 CYS B 137 1555 1555 1.95 SSBOND 2 CYS A 52 CYS A 277 1555 1555 2.06 SSBOND 3 CYS A 64 CYS A 76 1555 1555 1.76 SSBOND 4 CYS A 97 CYS A 139 1555 1555 2.07 SSBOND 5 CYS A 281 CYS A 305 1555 1555 2.02 SSBOND 6 CYS B 144 CYS B 148 1555 1555 2.10 SSBOND 7 CYS C 14 CYS D 137 1555 1555 2.07 SSBOND 8 CYS C 52 CYS C 277 1555 1555 2.04 SSBOND 9 CYS C 64 CYS C 76 1555 1555 2.09 SSBOND 10 CYS C 97 CYS C 139 1555 1555 2.10 SSBOND 11 CYS C 281 CYS C 305 1555 1555 2.02 SSBOND 12 CYS D 144 CYS D 148 1555 1555 2.09 SSBOND 13 CYS E 14 CYS F 137 1555 1555 2.07 SSBOND 14 CYS E 52 CYS E 277 1555 1555 2.06 SSBOND 15 CYS E 64 CYS E 76 1555 1555 1.86 SSBOND 16 CYS E 97 CYS E 139 1555 1555 2.09 SSBOND 17 CYS E 281 CYS E 305 1555 1555 2.04 SSBOND 18 CYS F 144 CYS F 148 1555 1555 2.07 LINK ND2 ASN A 33 C1 NAG A 401 1555 1555 1.48 LINK ND2 ASN A 169 C1 NAG A 402 1555 1555 1.44 LINK ND2 ASN D 154 C1 NAG D 201 1555 1555 1.46 LINK ND2 ASN E 21 C1 NAG E 401 1555 1555 1.42 LINK ND2 ASN E 169 C1 NAG E 402 1555 1555 1.41 LINK ND2 ASN F 154 C1 NAG F 201 1555 1555 1.43 LINK O3 NAG G 1 C1 GAL G 2 1555 1555 1.41 LINK O3 GAL G 2 C2 SIA G 3 1555 1555 1.45 CISPEP 1 THR A 263 ASN A 263A 0 13.75 CISPEP 2 ALA C 159 THR C 160 0 14.38 CISPEP 3 ALA E 159 THR E 160 0 3.15 CRYST1 185.735 99.271 133.437 90.00 126.45 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005384 0.000000 0.003977 0.00000 SCALE2 0.000000 0.010073 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009317 0.00000