HEADER LIGASE 12-JAN-15 4XKZ TITLE CRYSTAL STRUCTURE OF THE C-TERMINAL ANTICODON LOOP BINDING DOMAIN OF A TITLE 2 VALYL-TRNA SYNTHETASE FROM PSEUDOMONAS AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: VALINE-TRNA LIGASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL ANTICODON LOOP BINDING DOMAIN (UNP RESIDUES 639- COMPND 5 898); COMPND 6 SYNONYM: VALYL-TRNA SYNTHETASE,VALRS; COMPND 7 EC: 6.1.1.9; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228; SOURCE 5 GENE: VALS, PA3834; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: BG1861 KEYWDS STRUCTURAL GENOMICS, AMINOACYLATION, TRNA BINDING, PROTEIN SYNTHESIS, KEYWDS 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID, KEYWDS 3 LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 28-FEB-24 4XKZ 1 LINK REVDAT 2 22-NOV-17 4XKZ 1 SOURCE REMARK REVDAT 1 11-FEB-15 4XKZ 0 JRNL AUTH T.E.EDWARDS,D.FOX III,C.MANOIL JRNL TITL CRYSTAL STRUCTURE OF THE C-TERMINAL ANTICODON LOOP BINDING JRNL TITL 2 DOMAIN OF A VALYL-TRNA SYNTHETASE FROM PSEUDOMONAS JRNL TITL 3 AERUGINOSA. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 31655 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1585 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2182 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2140 REMARK 3 BIN FREE R VALUE SET COUNT : 121 REMARK 3 BIN FREE R VALUE : 0.2540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1972 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 274 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.81000 REMARK 3 B22 (A**2) : -1.81000 REMARK 3 B33 (A**2) : 3.62000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.102 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.069 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.475 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2047 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1955 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2779 ; 1.775 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4474 ; 1.061 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 254 ; 5.253 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 98 ;34.421 ;23.776 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 338 ;13.014 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;15.416 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 307 ; 0.115 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2318 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 472 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1007 ; 1.542 ; 2.573 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1006 ; 1.537 ; 2.570 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1258 ; 2.292 ; 3.844 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 631 A 881 REMARK 3 ORIGIN FOR THE GROUP (A): 25.0327 5.8399 15.7221 REMARK 3 T TENSOR REMARK 3 T11: 0.0193 T22: 0.0400 REMARK 3 T33: 0.0357 T12: -0.0229 REMARK 3 T13: -0.0050 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 1.7463 L22: 0.5991 REMARK 3 L33: 0.4510 L12: 0.4340 REMARK 3 L13: 0.1816 L23: 0.0747 REMARK 3 S TENSOR REMARK 3 S11: 0.0945 S12: -0.2331 S13: 0.1199 REMARK 3 S21: 0.0756 S22: -0.0780 S23: -0.0100 REMARK 3 S31: -0.0299 S32: 0.0064 S33: -0.0165 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4XKZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000205864. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE, XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31655 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.46900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PSAEA.18849.A.B4.PW37589 AT 18 MG/ML REMARK 280 AGAINST MORPHEUS SCREEN CONDITION B6 10% PEG 8000, 20% ETHYLENE REMARK 280 GLYCOL, 0.1 M MOPS-HEPES, PH7.5, 0.03 M SODIUM FLUORIDE, 0.03 M REMARK 280 SODIUM BROMIDE, 0.03 M SODIUM IODIDE, CRYSTAL TRACKING ID REMARK 280 259627B6, UNIQUE PUCK ID OAF3-9, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 51.68000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 51.68000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 51.68000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 51.68000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 51.68000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.68000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 51.68000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.68000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 630 REMARK 465 ILE A 882 REMARK 465 ASP A 883 REMARK 465 LYS A 884 REMARK 465 SER A 885 REMARK 465 ALA A 886 REMARK 465 GLU A 887 REMARK 465 LEU A 888 REMARK 465 GLY A 889 REMARK 465 ARG A 890 REMARK 465 LEU A 891 REMARK 465 ASP A 892 REMARK 465 LYS A 893 REMARK 465 GLU A 894 REMARK 465 ILE A 895 REMARK 465 GLN A 896 REMARK 465 ARG A 897 REMARK 465 LEU A 898 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 814 CG OD1 ND2 REMARK 470 LYS A 819 CG CD CE NZ REMARK 470 LYS A 826 CG CD CE NZ REMARK 470 LYS A 845 CG CD CE NZ REMARK 470 LYS A 848 CG CD CE NZ REMARK 470 GLU A 856 CG CD OE1 OE2 REMARK 470 GLU A 859 CG CD OE1 OE2 REMARK 470 GLU A 860 CG CD OE1 OE2 REMARK 470 MET A 878 CG SD CE REMARK 470 LEU A 881 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 730 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 730 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 ARG A 736 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG A 807 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 879 -57.10 -25.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1178 DISTANCE = 5.82 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 905 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 906 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues IOD A 902 and IOD A REMARK 800 903 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-PSAEA.18849.A RELATED DB: TARGETTRACK DBREF 4XKZ A 639 898 UNP Q9HXH0 SYV_PSEAE 639 898 SEQADV 4XKZ MET A 630 UNP Q9HXH0 INITIATING METHIONINE SEQADV 4XKZ ALA A 631 UNP Q9HXH0 EXPRESSION TAG SEQADV 4XKZ HIS A 632 UNP Q9HXH0 EXPRESSION TAG SEQADV 4XKZ HIS A 633 UNP Q9HXH0 EXPRESSION TAG SEQADV 4XKZ HIS A 634 UNP Q9HXH0 EXPRESSION TAG SEQADV 4XKZ HIS A 635 UNP Q9HXH0 EXPRESSION TAG SEQADV 4XKZ HIS A 636 UNP Q9HXH0 EXPRESSION TAG SEQADV 4XKZ HIS A 637 UNP Q9HXH0 EXPRESSION TAG SEQADV 4XKZ MET A 638 UNP Q9HXH0 EXPRESSION TAG SEQRES 1 A 269 MET ALA HIS HIS HIS HIS HIS HIS MET CYS ASN LYS ILE SEQRES 2 A 269 TRP ASN ALA ALA ASN PHE VAL ILE GLU ASN THR ASP GLY SEQRES 3 A 269 GLN ASP THR GLY VAL ASN GLY GLU PRO VAL GLU LEU SER SEQRES 4 A 269 SER VAL ASP ARG TRP ILE ILE SER GLN LEU GLN ARG THR SEQRES 5 A 269 GLU GLN GLU VAL THR ARG GLN LEU ASP ALA PHE ARG PHE SEQRES 6 A 269 ASP LEU ALA ALA GLN ALA LEU TYR GLU PHE ILE TRP ASP SEQRES 7 A 269 GLU TYR CYS ALA TRP TYR LEU GLU LEU VAL LYS PRO VAL SEQRES 8 A 269 LEU TRP ASP GLU ASN ALA PRO ILE GLU ARG GLN ARG GLY SEQRES 9 A 269 THR ARG ARG THR LEU ILE ARG VAL LEU GLU THR ALA LEU SEQRES 10 A 269 ARG LEU ALA HIS PRO PHE MET PRO PHE ILE THR GLU GLU SEQRES 11 A 269 ILE TRP GLN ARG ILE LYS GLY GLN ALA GLY LYS GLU GLY SEQRES 12 A 269 PRO THR LEU MET LEU GLN PRO TRP PRO VAL ALA ASP GLU SEQRES 13 A 269 GLY ARG ILE ASP ALA ALA ALA GLU GLY ASP ILE GLU TRP SEQRES 14 A 269 VAL LYS ALA LEU MET LEU GLY VAL ARG GLN ILE ARG GLY SEQRES 15 A 269 GLU MET ASN ILE SER MET ALA LYS ARG ILE ASP ILE ILE SEQRES 16 A 269 LEU LYS ASN ALA SER PRO SER ASP HIS ARG ARG LEU ALA SEQRES 17 A 269 ASP ASN GLU PRO LEU LEU MET LYS LEU ALA LYS LEU GLU SEQRES 18 A 269 SER ILE ARG VAL LEU GLU ALA GLY GLU GLU ALA PRO MET SEQRES 19 A 269 SER ALA THR ALA LEU VAL GLY ASP MET GLU VAL LEU VAL SEQRES 20 A 269 PRO MET ALA GLY LEU ILE ASP LYS SER ALA GLU LEU GLY SEQRES 21 A 269 ARG LEU ASP LYS GLU ILE GLN ARG LEU HET IOD A 901 1 HET IOD A 902 1 HET IOD A 903 1 HET IOD A 904 1 HET PGE A 905 10 HET PGE A 906 10 HETNAM IOD IODIDE ION HETNAM PGE TRIETHYLENE GLYCOL FORMUL 2 IOD 4(I 1-) FORMUL 6 PGE 2(C6 H14 O4) FORMUL 8 HOH *274(H2 O) HELIX 1 AA1 HIS A 634 ASP A 654 1 21 HELIX 2 AA2 SER A 668 ALA A 691 1 24 HELIX 3 AA3 ARG A 693 GLU A 708 1 16 HELIX 4 AA4 TRP A 712 VAL A 717 1 6 HELIX 5 AA5 VAL A 717 TRP A 722 1 6 HELIX 6 AA6 PRO A 727 HIS A 750 1 24 HELIX 7 AA7 MET A 753 GLY A 769 1 17 HELIX 8 AA8 THR A 774 GLN A 778 5 5 HELIX 9 AA9 ASP A 784 ILE A 788 5 5 HELIX 10 AB1 ASP A 789 MET A 813 1 25 HELIX 11 AB2 SER A 829 ALA A 847 1 19 SHEET 1 AA1 4 LEU A 849 VAL A 854 0 SHEET 2 AA1 4 ILE A 821 LYS A 826 1 N ILE A 821 O GLU A 850 SHEET 3 AA1 4 MET A 872 PRO A 877 -1 O LEU A 875 N ILE A 824 SHEET 4 AA1 4 SER A 864 VAL A 869 -1 N VAL A 869 O MET A 872 LINK I IOD A 902 I IOD A 903 1555 1555 2.76 SITE 1 AC1 2 ILE A 756 HOH A1045 SITE 1 AC2 9 LYS A 641 ASN A 644 ALA A 645 PHE A 648 SITE 2 AC2 9 GLU A 715 LYS A 718 HOH A1173 HOH A1184 SITE 3 AC2 9 HOH A1190 SITE 1 AC3 8 ALA A 711 TRP A 712 MET A 803 ARG A 807 SITE 2 AC3 8 HOH A1101 HOH A1197 HOH A1222 HOH A1235 SITE 1 AC4 3 ARG A 740 HOH A1040 HOH A1169 CRYST1 103.360 103.360 79.140 90.00 90.00 90.00 P 4 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009675 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009675 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012636 0.00000