HEADER HYDROLASE 14-JAN-15 4XM5 TITLE C. GLABRATA SLX1. COMPND MOL_ID: 1; COMPND 2 MOLECULE: STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1; COMPND 3 CHAIN: A; COMPND 4 EC: 3.1.-.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA GLABRATA; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 5478; SOURCE 5 GENE: SLX1, CAGL0K06941G; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEASE, DNA REPAIR, GIY-YIG, HOMOGOLOUS RECOMBINATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR V.GAUR,H.D.M.WYATT,W.KOMOROWSKA,R.H.SZCZEPANOWSKI,D.DE SANCTIS, AUTHOR 2 K.M.GORECKA,S.C.WEST,M.NOWOTNY REVDAT 2 20-MAY-15 4XM5 1 JRNL REVDAT 1 25-MAR-15 4XM5 0 JRNL AUTH V.GAUR,H.D.WYATT,W.KOMOROWSKA,R.H.SZCZEPANOWSKI, JRNL AUTH 2 D.DE SANCTIS,K.M.GORECKA,S.C.WEST,M.NOWOTNY JRNL TITL STRUCTURAL AND MECHANISTIC ANALYSIS OF THE SLX1-SLX4 JRNL TITL 2 ENDONUCLEASE. JRNL REF CELL REP V. 10 1467 2015 JRNL REFN ESSN 2211-1247 JRNL PMID 25753413 JRNL DOI 10.1016/J.CELREP.2015.02.019 REMARK 2 REMARK 2 RESOLUTION. 2.34 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.34 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 24808 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2495 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.7352 - 6.1291 1.00 1240 143 0.2132 0.2432 REMARK 3 2 6.1291 - 4.8662 1.00 1243 140 0.1929 0.2530 REMARK 3 3 4.8662 - 4.2515 1.00 1243 135 0.1496 0.2071 REMARK 3 4 4.2515 - 3.8630 1.00 1222 134 0.1575 0.1944 REMARK 3 5 3.8630 - 3.5862 1.00 1240 141 0.1536 0.2346 REMARK 3 6 3.5862 - 3.3748 1.00 1233 144 0.1740 0.2261 REMARK 3 7 3.3748 - 3.2058 1.00 1254 140 0.1668 0.2234 REMARK 3 8 3.2058 - 3.0663 1.00 1241 141 0.2009 0.2902 REMARK 3 9 3.0663 - 2.9483 1.00 1233 140 0.2060 0.2999 REMARK 3 10 2.9483 - 2.8466 1.00 1233 138 0.2034 0.2934 REMARK 3 11 2.8466 - 2.7576 1.00 1245 140 0.2151 0.2529 REMARK 3 12 2.7576 - 2.6787 1.00 1252 138 0.2199 0.2735 REMARK 3 13 2.6787 - 2.6082 1.00 1197 131 0.2357 0.2786 REMARK 3 14 2.6082 - 2.5446 1.00 1275 144 0.2349 0.2922 REMARK 3 15 2.5446 - 2.4867 1.00 1227 141 0.2327 0.3541 REMARK 3 16 2.4867 - 2.4338 1.00 1235 141 0.2469 0.3304 REMARK 3 17 2.4338 - 2.3851 1.00 1219 127 0.2761 0.3565 REMARK 3 18 2.3851 - 2.3401 0.99 1281 137 0.2706 0.3510 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2148 REMARK 3 ANGLE : 1.105 2912 REMARK 3 CHIRALITY : 0.042 328 REMARK 3 PLANARITY : 0.006 366 REMARK 3 DIHEDRAL : 13.971 754 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6816 16.4184 60.4250 REMARK 3 T TENSOR REMARK 3 T11: 0.3050 T22: 0.3166 REMARK 3 T33: 0.2457 T12: 0.0507 REMARK 3 T13: 0.0368 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 4.0193 L22: 3.9840 REMARK 3 L33: 4.1337 L12: 1.1375 REMARK 3 L13: -1.8997 L23: -1.4605 REMARK 3 S TENSOR REMARK 3 S11: -0.0160 S12: -0.3240 S13: -0.2856 REMARK 3 S21: 0.1492 S22: -0.0170 S23: -0.0846 REMARK 3 S31: 0.3365 S32: 0.3186 S33: 0.0152 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 177 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.8627 33.0795 67.7394 REMARK 3 T TENSOR REMARK 3 T11: 0.5204 T22: 0.5316 REMARK 3 T33: 0.4286 T12: -0.0972 REMARK 3 T13: 0.2341 T23: -0.1473 REMARK 3 L TENSOR REMARK 3 L11: 2.8711 L22: 6.4449 REMARK 3 L33: 1.8089 L12: 2.6577 REMARK 3 L13: -0.7470 L23: -1.2509 REMARK 3 S TENSOR REMARK 3 S11: 0.6998 S12: -0.4852 S13: 0.7531 REMARK 3 S21: 0.8419 S22: -0.0339 S23: 0.4862 REMARK 3 S31: -0.7879 S32: 0.6974 S33: -0.6470 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 216 THROUGH 303 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.6729 39.0437 54.5971 REMARK 3 T TENSOR REMARK 3 T11: 0.6405 T22: 0.8098 REMARK 3 T33: 0.4932 T12: -0.3008 REMARK 3 T13: 0.1621 T23: -0.1721 REMARK 3 L TENSOR REMARK 3 L11: 3.4529 L22: 1.8304 REMARK 3 L33: 4.5232 L12: 2.2577 REMARK 3 L13: -0.6355 L23: 0.4198 REMARK 3 S TENSOR REMARK 3 S11: 0.6727 S12: -1.3116 S13: 0.8154 REMARK 3 S21: 0.6058 S22: -0.1765 S23: -0.1073 REMARK 3 S31: -0.8353 S32: 1.4070 S33: -0.3378 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XM5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000205899. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.280 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24808 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.340 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.34 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.67100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.380 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4 M SODIUM CITRATE TRIBASIC REMARK 280 DIHYDRATE AND 0.1 M HEPES-NAOH (PH 7.5), VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 91.82100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.74300 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.74300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 137.73150 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.74300 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.74300 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 45.91050 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.74300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.74300 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 137.73150 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.74300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.74300 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 45.91050 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 91.82100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 57.48600 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 57.48600 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 91.82100 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 47 REMARK 465 GLY A 48 REMARK 465 ALA A 49 REMARK 465 TYR A 50 REMARK 465 ARG A 51 REMARK 465 THR A 52 REMARK 465 LYS A 53 REMARK 465 ILE A 91 REMARK 465 LYS A 92 REMARK 465 SER A 93 REMARK 465 GLN A 94 REMARK 465 ASP A 95 REMARK 465 ARG A 96 REMARK 465 VAL A 97 REMARK 465 THR A 151 REMARK 465 GLN A 152 REMARK 465 GLU A 153 REMARK 465 SER A 154 REMARK 465 ILE A 155 REMARK 465 ASP A 156 REMARK 465 LYS A 227 REMARK 465 HIS A 228 REMARK 465 ASN A 229 REMARK 465 LEU A 230 REMARK 465 SER A 231 REMARK 465 GLY A 232 REMARK 465 ASN A 233 REMARK 465 ILE A 234 REMARK 465 SER A 235 REMARK 465 GLU A 236 REMARK 465 THR A 264 REMARK 465 GLU A 265 REMARK 465 LEU A 266 REMARK 465 PRO A 267 REMARK 465 LYS A 268 REMARK 465 THR A 304 REMARK 465 ALA A 305 REMARK 465 ASP A 306 REMARK 465 ASP A 307 REMARK 465 LYS A 308 REMARK 465 LYS A 309 REMARK 465 LYS A 310 REMARK 465 THR A 311 REMARK 465 ILE A 312 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 2 CG CD OE1 OE2 REMARK 470 GLN A 23 CD OE1 NE2 REMARK 470 ARG A 38 NE CZ NH1 NH2 REMARK 470 ARG A 46 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 89 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 90 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL A 98 CG1 CG2 REMARK 470 LYS A 99 CG CD CE NZ REMARK 470 ARG A 101 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 105 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 119 CG CD CE NZ REMARK 470 GLN A 150 CG CD OE1 NE2 REMARK 470 ASN A 157 CG OD1 ND2 REMARK 470 GLN A 165 CG CD OE1 NE2 REMARK 470 GLU A 188 CD OE1 OE2 REMARK 470 GLU A 200 CG CD OE1 OE2 REMARK 470 ILE A 216 CG1 CG2 CD1 REMARK 470 ASN A 217 CG OD1 ND2 REMARK 470 ILE A 225 CG1 CG2 CD1 REMARK 470 ILE A 226 CG1 CG2 CD1 REMARK 470 ASN A 237 CG OD1 ND2 REMARK 470 ARG A 243 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 258 CZ NH1 NH2 REMARK 470 ASN A 263 CG OD1 ND2 REMARK 470 ASP A 270 CG OD1 OD2 REMARK 470 SER A 276 OG REMARK 470 LYS A 278 CG CD CE NZ REMARK 470 LYS A 281 CE NZ REMARK 470 LYS A 287 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 22 O HOH A 550 2.03 REMARK 500 O HOH A 564 O HOH A 565 2.15 REMARK 500 O HOH A 539 O HOH A 554 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 100 -143.62 -131.65 REMARK 500 THR A 169 -136.79 -97.50 REMARK 500 ASN A 173 20.97 -142.11 REMARK 500 THR A 214 -70.31 -96.19 REMARK 500 ILE A 216 59.34 -105.50 REMARK 500 ASP A 244 97.55 -65.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 219 SG REMARK 620 2 CYS A 222 SG 112.3 REMARK 620 3 HIS A 252 ND1 108.8 91.2 REMARK 620 4 CYS A 255 SG 107.0 126.5 109.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 242 SG REMARK 620 2 CYS A 247 SG 99.8 REMARK 620 3 CYS A 279 SG 91.7 102.8 REMARK 620 4 CYS A 282 SG 89.3 161.9 92.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 403 DBREF 4XM5 A 1 312 UNP Q6FML9 SLX1_CANGA 1 312 SEQADV 4XM5 GLN A 79 UNP Q6FML9 GLU 79 CONFLICT SEQRES 1 A 312 MET GLU GLU PHE GLN GLN ILE PRO ASP PHE TYR GLY CYS SEQRES 2 A 312 TYR LEU LEU GLN SER ILE SER LYS ARG GLN SER PHE TYR SEQRES 3 A 312 ILE GLY SER THR PRO ASN PRO VAL ARG ARG LEU ARG GLN SEQRES 4 A 312 HIS ASN GLY SER LEU SER ARG GLY GLY ALA TYR ARG THR SEQRES 5 A 312 LYS ARG ASP GLY THR ARG PRO TRP GLU MET VAL ALA ILE SEQRES 6 A 312 VAL TYR GLY PHE PRO SER ARG ILE ALA ALA LEU GLN PHE SEQRES 7 A 312 GLN HIS ALA TRP GLN HIS GLY TYR GLN THR ARG TYR ILE SEQRES 8 A 312 LYS SER GLN ASP ARG VAL VAL LYS THR ARG LYS GLY GLY SEQRES 9 A 312 ARG SER ILE HIS HIS LYS LEU ALA MET ILE THR SER LEU SEQRES 10 A 312 LEU LYS ASN GLU TYR PHE ARG TYR MET ASP LEU THR LEU SEQRES 11 A 312 HIS PHE PHE ASN GLN LYS VAL GLU GLU ILE TRP LYS ASN SEQRES 12 A 312 ASP LYS PHE ASN VAL SER GLN THR GLN GLU SER ILE ASP SEQRES 13 A 312 ASN ASN TYR THR VAL SER LEU SER GLN ASP ALA LEU THR SEQRES 14 A 312 GLU ILE ASN ASN ASP THR ILE ASP ASP ILE MET ASP VAL SEQRES 15 A 312 ASN GLU LYS ASN MET GLU LEU VAL GLN ASN LEU TYR SER SEQRES 16 A 312 THR THR LEU ALA GLU LYS THR LYS THR LEU LEU LEU TYR SEQRES 17 A 312 LYS GLU LYS ILE ASP THR GLY ILE ASN THR CYS GLN PHE SEQRES 18 A 312 CYS ASN LYS ILE ILE LYS HIS ASN LEU SER GLY ASN ILE SEQRES 19 A 312 SER GLU ASN LEU PHE ALA PHE CYS ARG ASP THR SER CYS SEQRES 20 A 312 THR PHE VAL SER HIS LEU ALA CYS ALA TYR ARG TYR PHE SEQRES 21 A 312 MET SER ASN THR GLU LEU PRO LYS GLU ASP THR ILE ILE SEQRES 22 A 312 PRO GLN SER PRO LYS CYS PRO LYS CYS TYR THR LEU LEU SEQRES 23 A 312 LYS TRP CYS ASP VAL ILE TYR TYR SER ILE LYS LEU ASN SEQRES 24 A 312 LYS ASP ASN THR THR ALA ASP ASP LYS LYS LYS THR ILE HET ZN A 401 1 HET ZN A 402 1 HET CL A 403 1 HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION FORMUL 2 ZN 2(ZN 2+) FORMUL 4 CL CL 1- FORMUL 5 HOH *103(H2 O) HELIX 1 AA1 ASN A 32 GLY A 42 1 11 HELIX 2 AA2 SER A 71 GLY A 85 1 15 HELIX 3 AA3 SER A 106 GLU A 121 1 16 HELIX 4 AA4 TYR A 122 ASP A 127 5 6 HELIX 5 AA5 GLN A 135 ASP A 144 1 10 HELIX 6 AA6 THR A 175 GLY A 215 1 41 HELIX 7 AA7 LEU A 253 ASN A 263 1 11 HELIX 8 AA8 LYS A 287 THR A 303 1 17 SHEET 1 AA1 5 PHE A 25 THR A 30 0 SHEET 2 AA1 5 GLY A 12 SER A 18 -1 N LEU A 16 O TYR A 26 SHEET 3 AA1 5 TRP A 60 TYR A 67 -1 O GLU A 61 N GLN A 17 SHEET 4 AA1 5 THR A 129 ASN A 134 -1 O HIS A 131 N ILE A 65 SHEET 5 AA1 5 THR A 160 LEU A 168 1 O THR A 160 N LEU A 130 SHEET 1 AA2 2 TYR A 86 THR A 88 0 SHEET 2 AA2 2 LYS A 99 LYS A 102 -1 O THR A 100 N GLN A 87 SHEET 1 AA3 2 PHE A 239 PHE A 241 0 SHEET 2 AA3 2 VAL A 250 HIS A 252 -1 O SER A 251 N ALA A 240 LINK SG CYS A 219 ZN ZN A 401 1555 1555 2.61 LINK SG CYS A 222 ZN ZN A 401 1555 1555 2.61 LINK SG CYS A 242 ZN ZN A 402 1555 1555 2.76 LINK SG CYS A 247 ZN ZN A 402 1555 1555 2.64 LINK ND1 HIS A 252 ZN ZN A 401 1555 1555 2.41 LINK SG CYS A 255 ZN ZN A 401 1555 1555 2.48 LINK SG CYS A 279 ZN ZN A 402 1555 1555 2.82 LINK SG CYS A 282 ZN ZN A 402 1555 1555 2.70 CISPEP 1 ARG A 58 PRO A 59 0 4.11 CISPEP 2 ASN A 157 ASN A 158 0 -6.38 SITE 1 AC1 4 CYS A 219 CYS A 222 HIS A 252 CYS A 255 SITE 1 AC2 4 CYS A 242 CYS A 247 CYS A 279 CYS A 282 SITE 1 AC3 4 ARG A 54 ASP A 55 GLY A 56 ARG A 58 CRYST1 57.486 57.486 183.642 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017396 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017396 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005445 0.00000