HEADER TRANSPORT PROTEIN/INHIBITOR 16-JAN-15 4XPA TITLE X-RAY STRUCTURE OF DROSOPHILA DOPAMINE TRANSPORTER BOUND TO 3, TITLE 2 4DICHLOROPHENETHYLAMINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSPORTER; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANTIBODY FRAGMENT HEAVY CHAIN-PROTEIN, 9D5-HEAVY CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: ANTIBODY FRAGMENT LIGHT CHAIN-PROTEIN, 9D5-LIGHT CHAIN; COMPND 11 CHAIN: H; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: DAT, DMEL_CG8380; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: GNTI-HEK293S; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 14 EXPRESSION_SYSTEM_CELL_LINE: HYBRIDOMA; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 17 ORGANISM_TAXID: 10090; SOURCE 18 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 20 EXPRESSION_SYSTEM_CELL_LINE: HYBRIDOMA KEYWDS INTEGRAL MEMBRANE PROTEIN, ALL-ALPHA HELICAL ANTIDEPRESSANT COMPLEX, KEYWDS 2 TRANSPORT PROTEIN-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR P.ARAVIND,K.WANG,E.GOUAUX REVDAT 5 27-SEP-23 4XPA 1 HETSYN REVDAT 4 29-JUL-20 4XPA 1 COMPND SOURCE JRNL REMARK REVDAT 4 2 1 HET HETNAM HETSYN FORMUL REVDAT 4 3 1 LINK SITE ATOM REVDAT 3 03-JUN-15 4XPA 1 JRNL REVDAT 2 27-MAY-15 4XPA 1 JRNL REVDAT 1 20-MAY-15 4XPA 0 JRNL AUTH K.H.WANG,A.PENMATSA,E.GOUAUX JRNL TITL NEUROTRANSMITTER AND PSYCHOSTIMULANT RECOGNITION BY THE JRNL TITL 2 DOPAMINE TRANSPORTER. JRNL REF NATURE V. 521 322 2015 JRNL REFN ESSN 1476-4687 JRNL PMID 25970245 JRNL DOI 10.1038/NATURE14431 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 44839 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.460 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.1759 - 7.1101 0.91 3160 147 0.2228 0.2208 REMARK 3 2 7.1101 - 5.6463 0.94 3104 145 0.2269 0.2396 REMARK 3 3 5.6463 - 4.9334 0.95 3127 146 0.2043 0.2097 REMARK 3 4 4.9334 - 4.4827 0.95 3099 144 0.1820 0.2236 REMARK 3 5 4.4827 - 4.1616 0.95 3081 144 0.1918 0.2471 REMARK 3 6 4.1616 - 3.9163 0.96 3119 145 0.2118 0.2297 REMARK 3 7 3.9163 - 3.7203 0.94 3018 141 0.2745 0.3344 REMARK 3 8 3.7203 - 3.5584 0.96 3094 144 0.2784 0.3277 REMARK 3 9 3.5584 - 3.4214 0.96 3090 144 0.2585 0.2766 REMARK 3 10 3.4214 - 3.3034 0.96 3100 145 0.2772 0.3322 REMARK 3 11 3.3034 - 3.2001 0.97 3091 145 0.2736 0.2779 REMARK 3 12 3.2001 - 3.1087 0.95 3049 141 0.2895 0.3079 REMARK 3 13 3.1087 - 3.0268 0.90 2882 135 0.2842 0.3625 REMARK 3 14 3.0268 - 2.9530 0.88 2827 132 0.2929 0.3131 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 83.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 79.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 7818 REMARK 3 ANGLE : 0.894 10662 REMARK 3 CHIRALITY : 0.034 1196 REMARK 3 PLANARITY : 0.004 1317 REMARK 3 DIHEDRAL : 12.260 2699 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XPA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000206064. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : PH 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44915 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.82300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4M48 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 400 (38%), TRIS 0.1M, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 48.16950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.50900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 70.06250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.50900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.16950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 70.06250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, L, H, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 20 REMARK 465 ASN A 21 REMARK 465 SER A 22 REMARK 465 ILE A 23 REMARK 465 SER A 24 REMARK 465 GLN A 600 REMARK 465 GLN A 601 REMARK 465 LEU A 602 REMARK 465 VAL A 603 REMARK 465 PRO A 604 REMARK 465 ARG A 605 REMARK 465 MET L -21 REMARK 465 ASP L -20 REMARK 465 PHE L -19 REMARK 465 GLN L -18 REMARK 465 VAL L -17 REMARK 465 GLN L -16 REMARK 465 ILE L -15 REMARK 465 PHE L -14 REMARK 465 SER L -13 REMARK 465 PHE L -12 REMARK 465 LEU L -11 REMARK 465 LEU L -10 REMARK 465 ILE L -9 REMARK 465 SER L -8 REMARK 465 ALA L -7 REMARK 465 SER L -6 REMARK 465 VAL L -5 REMARK 465 ALA L -4 REMARK 465 MET L -3 REMARK 465 SER L -2 REMARK 465 ARG L -1 REMARK 465 GLY L 0 REMARK 465 CYS L 215 REMARK 465 MET H -18 REMARK 465 ASN H -17 REMARK 465 PHE H -16 REMARK 465 GLY H -15 REMARK 465 LEU H -14 REMARK 465 ARG H -13 REMARK 465 LEU H -12 REMARK 465 VAL H -11 REMARK 465 PHE H -10 REMARK 465 LEU H -9 REMARK 465 VAL H -8 REMARK 465 LEU H -7 REMARK 465 ILE H -6 REMARK 465 LEU H -5 REMARK 465 LYS H -4 REMARK 465 GLY H -3 REMARK 465 VAL H -2 REMARK 465 GLN H -1 REMARK 465 CYS H 0 REMARK 465 GLY H 220 REMARK 465 PRO H 221 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 256 CG CD CE NZ REMARK 470 TYR A 305 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 439 CG CD CE NZ REMARK 470 ARG A 442 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 446 CG CD1 CD2 REMARK 470 SER L 128 OG REMARK 470 SER L 169 OG REMARK 470 LYS L 184 CG CD CE NZ REMARK 470 GLU H 1 CG CD OE1 OE2 REMARK 470 GLN H 3 CG CD OE1 NE2 REMARK 470 THR H 28 OG1 CG2 REMARK 470 SER H 30 OG REMARK 470 GLN H 111 CG CD OE1 NE2 REMARK 470 ASP H 136 CG OD1 OD2 REMARK 470 VAL H 189 CG1 CG2 REMARK 470 SER H 198 OG REMARK 470 LYS H 214 CG CD CE NZ REMARK 470 LYS H 215 CG CD CE NZ REMARK 470 GLU H 217 CG CD OE1 OE2 REMARK 470 ARG H 219 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 420 O HOH A 801 1.87 REMARK 500 O HOH A 802 O HOH A 809 2.04 REMARK 500 O HOH A 803 O HOH A 806 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 50 -60.64 -104.95 REMARK 500 LEU A 102 -65.06 -95.79 REMARK 500 THR A 140 162.66 174.33 REMARK 500 HIS A 372 -67.50 -101.16 REMARK 500 VAL A 391 -66.54 -132.41 REMARK 500 ILE A 440 -60.81 -98.91 REMARK 500 LEU A 531 -61.19 -90.31 REMARK 500 ALA A 548 -127.75 48.72 REMARK 500 LEU A 586 -139.89 49.11 REMARK 500 PRO A 596 -177.86 -61.70 REMARK 500 THR L 52 -36.69 76.12 REMARK 500 GLN L 157 -61.67 -106.42 REMARK 500 ASN L 191 -58.47 -129.55 REMARK 500 VAL H 48 -64.51 -90.58 REMARK 500 THR H 137 -3.20 71.23 REMARK 500 PHE H 152 137.05 -175.36 REMARK 500 PRO H 195 51.12 -92.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG H 98 GLY H 99 145.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 706 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 42 O REMARK 620 2 VAL A 45 O 55.0 REMARK 620 3 LEU A 417 O 125.9 71.0 REMARK 620 4 ASP A 420 OD1 124.5 123.6 80.7 REMARK 620 5 ASP A 420 OD2 75.1 90.0 103.2 50.1 REMARK 620 6 SER A 421 OG 85.1 63.2 73.5 149.1 152.9 REMARK 620 7 HOH A 801 O 80.5 58.5 67.4 65.8 42.1 117.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 705 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 44 O REMARK 620 2 ASP A 46 OD1 68.3 REMARK 620 3 ASN A 49 OD1 86.9 55.8 REMARK 620 4 SER A 320 O 70.4 103.5 154.6 REMARK 620 5 SER A 320 OG 143.1 131.5 129.8 74.2 REMARK 620 6 ASN A 352 OD1 87.0 150.6 109.3 81.6 77.9 REMARK 620 7 HOH A 805 O 127.7 61.2 76.1 108.4 73.5 145.3 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4XNU RELATED DB: PDB REMARK 900 RELATED ID: 4XNX RELATED DB: PDB REMARK 900 RELATED ID: 4XP1 RELATED DB: PDB REMARK 900 RELATED ID: 4XP4 RELATED DB: PDB REMARK 900 RELATED ID: 4XP5 RELATED DB: PDB REMARK 900 RELATED ID: 4XP6 RELATED DB: PDB REMARK 900 RELATED ID: 4XP9 RELATED DB: PDB REMARK 900 RELATED ID: 4XPB RELATED DB: PDB REMARK 900 RELATED ID: 4XPF RELATED DB: PDB REMARK 900 RELATED ID: 4XPG RELATED DB: PDB REMARK 900 RELATED ID: 4XPH RELATED DB: PDB REMARK 900 RELATED ID: 4XPT RELATED DB: PDB DBREF 4XPA A 20 605 PDB 4XPA 4XPA 20 605 DBREF 4XPA L -21 215 PDB 4XPA 4XPA -21 215 DBREF 4XPA H -18 221 PDB 4XPA 4XPA -18 221 SEQRES 1 A 545 MET ASN SER ILE SER ASP GLU ARG GLU THR TRP SER GLY SEQRES 2 A 545 LYS VAL ASP PHE LEU LEU SER VAL ILE GLY PHE ALA VAL SEQRES 3 A 545 ASP LEU ALA ASN VAL TRP ARG PHE PRO TYR LEU CYS TYR SEQRES 4 A 545 LYS ASN GLY GLY GLY ALA PHE LEU VAL PRO TYR GLY ILE SEQRES 5 A 545 MET LEU ALA VAL GLY GLY ILE PRO LEU PHE TYR MET GLU SEQRES 6 A 545 LEU ALA LEU GLY GLN HIS ASN ARG LYS GLY ALA ILE THR SEQRES 7 A 545 CYS TRP GLY ARG LEU VAL PRO LEU PHE LYS GLY ILE GLY SEQRES 8 A 545 TYR ALA VAL VAL LEU ILE ALA PHE TYR VAL ASP PHE TYR SEQRES 9 A 545 TYR ASN VAL ILE ILE ALA TRP SER LEU ARG PHE PHE PHE SEQRES 10 A 545 ALA SER PHE THR ASN SER LEU PRO TRP THR SER CYS ASN SEQRES 11 A 545 ASN ILE TRP ASN THR PRO ASN CYS ARG PRO PHE GLU GLY SEQRES 12 A 545 HIS VAL GLU GLY PHE GLN SER ALA ALA SER GLU TYR PHE SEQRES 13 A 545 ASN ARG TYR ILE LEU GLU LEU ASN ARG SER GLU GLY ILE SEQRES 14 A 545 HIS ASP LEU GLY ALA ILE LYS TRP ASP MET ALA LEU CYS SEQRES 15 A 545 LEU LEU ILE VAL TYR LEU ILE CYS TYR PHE SER LEU TRP SEQRES 16 A 545 LYS GLY ILE SER THR SER GLY LYS VAL VAL TRP PHE THR SEQRES 17 A 545 ALA LEU PHE PRO TYR ALA VAL LEU LEU ILE LEU LEU ILE SEQRES 18 A 545 ARG GLY LEU THR LEU PRO GLY SER PHE LEU GLY ILE GLN SEQRES 19 A 545 TYR TYR LEU THR PRO ASN PHE SER ALA ILE TYR LYS ALA SEQRES 20 A 545 GLU VAL TRP VAL ASP ALA ALA THR GLN VAL PHE PHE SER SEQRES 21 A 545 LEU GLY PRO GLY PHE GLY VAL LEU LEU ALA TYR ALA SER SEQRES 22 A 545 TYR ASN LYS TYR HIS ASN ASN VAL TYR LYS ASP ALA LEU SEQRES 23 A 545 LEU THR SER PHE ILE ASN SER ALA THR SER PHE ILE ALA SEQRES 24 A 545 GLY PHE VAL ILE PHE SER VAL LEU GLY TYR MET ALA HIS SEQRES 25 A 545 THR LEU GLY VAL ARG ILE GLU ASP VAL ALA THR GLU GLY SEQRES 26 A 545 PRO GLY LEU VAL PHE VAL VAL TYR PRO ALA ALA ILE ALA SEQRES 27 A 545 THR MET PRO ALA SER THR PHE TRP ALA LEU ILE PHE PHE SEQRES 28 A 545 MET MET LEU ALA THR LEU GLY LEU ASP SER SER PHE GLY SEQRES 29 A 545 GLY SER GLU ALA ILE ILE THR ALA LEU SER ASP GLU PHE SEQRES 30 A 545 PRO LYS ILE LYS ARG ASN ARG GLU LEU PHE VAL ALA GLY SEQRES 31 A 545 LEU PHE SER LEU TYR PHE VAL VAL GLY LEU ALA SER CYS SEQRES 32 A 545 THR GLN GLY GLY PHE TYR PHE PHE HIS LEU LEU ASP ARG SEQRES 33 A 545 TYR ALA ALA GLY TYR SER ILE LEU VAL ALA VAL PHE PHE SEQRES 34 A 545 GLU ALA ILE ALA VAL SER TRP ILE TYR GLY THR ASN ARG SEQRES 35 A 545 PHE SER GLU ASP ILE ARG ASP MET ILE GLY PHE PRO PRO SEQRES 36 A 545 GLY ARG TYR TRP GLN VAL CYS TRP ARG PHE VAL ALA PRO SEQRES 37 A 545 ILE PHE LEU LEU PHE ILE THR VAL TYR GLY LEU ILE GLY SEQRES 38 A 545 TYR GLU PRO LEU THR TYR ALA ASP TYR VAL TYR PRO SER SEQRES 39 A 545 TRP ALA ASN ALA LEU GLY TRP CYS ILE ALA GLY SER SER SEQRES 40 A 545 VAL VAL MET ILE PRO ALA VAL ALA ILE PHE LYS LEU LEU SEQRES 41 A 545 SER THR PRO GLY SER LEU ARG GLN ARG PHE THR ILE LEU SEQRES 42 A 545 THR THR PRO TRP ARG ASP GLN GLN LEU VAL PRO ARG SEQRES 1 L 237 MET ASP PHE GLN VAL GLN ILE PHE SER PHE LEU LEU ILE SEQRES 2 L 237 SER ALA SER VAL ALA MET SER ARG GLY GLU ASN VAL LEU SEQRES 3 L 237 THR GLN SER PRO ALA ILE MET SER THR SER PRO GLY GLU SEQRES 4 L 237 LYS VAL THR MET THR CYS ARG ALA SER SER SER VAL GLY SEQRES 5 L 237 SER SER TYR LEU HIS TRP TYR GLN GLN LYS SER GLY ALA SEQRES 6 L 237 SER PRO LYS LEU TRP ILE TYR SER THR SER ASN LEU ALA SEQRES 7 L 237 SER GLY VAL PRO ALA ARG PHE SER GLY SER GLY SER GLY SEQRES 8 L 237 THR SER TYR SER LEU THR ILE SER SER VAL GLU ALA GLU SEQRES 9 L 237 ASP ALA ALA THR TYR TYR CYS GLN GLN PHE SER GLY TYR SEQRES 10 L 237 PRO LEU THR PHE GLY SER GLY THR LYS LEU GLU MET LYS SEQRES 11 L 237 ARG ALA ASP ALA ALA PRO THR VAL SER ILE PHE PRO PRO SEQRES 12 L 237 SER SER GLU GLN LEU THR SER GLY GLY ALA SER VAL VAL SEQRES 13 L 237 CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP ILE ASN VAL SEQRES 14 L 237 LYS TRP LYS ILE ASP GLY SER GLU ARG GLN ASN GLY VAL SEQRES 15 L 237 LEU ASN SER TRP THR ASP GLN ASP SER LYS ASP SER THR SEQRES 16 L 237 TYR SER MET SER SER THR LEU THR LEU THR LYS ASP GLU SEQRES 17 L 237 TYR GLU ARG HIS ASN SER TYR THR CYS GLU ALA THR HIS SEQRES 18 L 237 LYS THR SER THR SER PRO ILE VAL LYS SER PHE ASN ARG SEQRES 19 L 237 ASN GLU CYS SEQRES 1 H 240 MET ASN PHE GLY LEU ARG LEU VAL PHE LEU VAL LEU ILE SEQRES 2 H 240 LEU LYS GLY VAL GLN CYS GLU VAL GLN LEU VAL GLU SER SEQRES 3 H 240 GLY GLY GLY LEU VAL LYS PRO GLY GLY SER LEU LYS LEU SEQRES 4 H 240 SER CYS ALA ALA SER GLY PHE THR PHE SER SER TYR ALA SEQRES 5 H 240 MET SER TRP VAL ARG GLN SER PRO GLU LYS ARG LEU GLU SEQRES 6 H 240 TRP VAL ALA GLU ILE SER SER GLY GLY ARG TYR ILE TYR SEQRES 7 H 240 TYR SER ASP THR VAL THR GLY ARG PHE THR ILE SER ARG SEQRES 8 H 240 ASP ASN ALA ARG ASN ILE LEU HIS LEU GLU MET SER SER SEQRES 9 H 240 LEU ARG SER GLU ASP THR ALA MET TYR TYR CYS ALA ARG SEQRES 10 H 240 GLY GLU VAL ARG GLN ARG GLY PHE ASP TYR TRP GLY GLN SEQRES 11 H 240 GLY THR THR LEU THR VAL SER SER ALA LYS THR THR ALA SEQRES 12 H 240 PRO SER VAL TYR PRO LEU ALA PRO VAL CYS GLY ASP THR SEQRES 13 H 240 THR GLY SER SER VAL THR LEU GLY CYS LEU VAL LYS GLY SEQRES 14 H 240 TYR PHE PRO GLU PRO VAL THR LEU THR TRP ASN SER GLY SEQRES 15 H 240 SER LEU SER SER GLY VAL HIS THR PHE PRO ALA VAL LEU SEQRES 16 H 240 GLN SER ASP LEU TYR THR LEU SER SER SER VAL THR VAL SEQRES 17 H 240 THR SER SER THR TRP PRO SER GLN SER ILE THR CYS ASN SEQRES 18 H 240 VAL ALA HIS PRO ALA SER SER THR LYS VAL ASP LYS LYS SEQRES 19 H 240 ILE GLU PRO ARG GLY PRO HET BGC B 1 12 HET GLC B 2 11 HET CLR A 701 28 HET CLR A 702 28 HET 42J A 703 11 HET CL A 704 1 HET NA A 705 1 HET NA A 706 1 HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM CLR CHOLESTEROL HETNAM 42J 2-(3,4-DICHLOROPHENYL)ETHANAMINE HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 4 BGC C6 H12 O6 FORMUL 4 GLC C6 H12 O6 FORMUL 5 CLR 2(C27 H46 O) FORMUL 7 42J C8 H9 CL2 N FORMUL 8 CL CL 1- FORMUL 9 NA 2(NA 1+) FORMUL 11 HOH *13(H2 O) HELIX 1 AA1 GLY A 32 VAL A 45 1 14 HELIX 2 AA2 LEU A 47 ARG A 52 1 6 HELIX 3 AA3 ARG A 52 GLY A 61 1 10 HELIX 4 AA4 GLY A 62 ALA A 64 5 3 HELIX 5 AA5 PHE A 65 GLY A 76 1 12 HELIX 6 AA6 GLY A 76 ARG A 92 1 17 HELIX 7 AA7 GLY A 94 VAL A 103 1 10 HELIX 8 AA8 PRO A 104 PHE A 106 5 3 HELIX 9 AA9 LYS A 107 ALA A 137 1 31 HELIX 10 AB1 SER A 210 TYR A 219 1 10 HELIX 11 AB2 GLU A 222 SER A 226 5 5 HELIX 12 AB3 LYS A 236 TRP A 255 1 20 HELIX 13 AB4 GLY A 257 THR A 285 1 29 HELIX 14 AB5 GLY A 288 THR A 298 1 11 HELIX 15 AB6 ASN A 300 ILE A 304 5 5 HELIX 16 AB7 LYS A 306 GLY A 322 1 17 HELIX 17 AB8 GLY A 326 TYR A 334 1 9 HELIX 18 AB9 ASN A 340 LEU A 374 1 35 HELIX 19 AC1 ARG A 377 ALA A 382 1 6 HELIX 20 AC2 GLY A 385 VAL A 391 1 7 HELIX 21 AC3 VAL A 391 ALA A 398 1 8 HELIX 22 AC4 ALA A 402 PHE A 437 1 36 HELIX 23 AC5 PHE A 437 ARG A 442 1 6 HELIX 24 AC6 ASN A 443 LEU A 460 1 18 HELIX 25 AC7 ALA A 461 THR A 464 5 4 HELIX 26 AC8 GLY A 466 ALA A 478 1 13 HELIX 27 AC9 GLY A 480 TRP A 496 1 17 HELIX 28 AD1 GLY A 499 GLY A 512 1 14 HELIX 29 AD2 GLY A 516 PHE A 525 1 10 HELIX 30 AD3 PHE A 525 GLY A 541 1 17 HELIX 31 AD4 PRO A 553 VAL A 569 1 17 HELIX 32 AD5 VAL A 569 THR A 582 1 14 HELIX 33 AD6 GLN A 588 THR A 595 1 8 HELIX 34 AD7 GLY L 30 SER L 32 5 3 HELIX 35 AD8 GLU L 80 ALA L 84 5 5 HELIX 36 AD9 SER L 122 THR L 127 1 6 HELIX 37 AE1 LYS L 184 ARG L 189 1 6 HELIX 38 AE2 THR H 28 TYR H 32 5 5 HELIX 39 AE3 ARG H 87 THR H 91 5 5 HELIX 40 AE4 VAL H 101 GLY H 105 5 5 HELIX 41 AE5 PRO H 206 SER H 209 5 4 SHEET 1 AA1 2 THR A 546 TYR A 547 0 SHEET 2 AA1 2 TYR A 550 VAL A 551 -1 O TYR A 550 N TYR A 547 SHEET 1 AA2 4 LEU L 4 SER L 7 0 SHEET 2 AA2 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA2 4 SER L 71 ILE L 76 -1 O TYR L 72 N CYS L 23 SHEET 4 AA2 4 PHE L 63 SER L 68 -1 N SER L 64 O THR L 75 SHEET 1 AA3 6 ILE L 10 THR L 13 0 SHEET 2 AA3 6 THR L 103 MET L 107 1 O LYS L 104 N MET L 11 SHEET 3 AA3 6 ALA L 85 GLN L 91 -1 N ALA L 85 O LEU L 105 SHEET 4 AA3 6 LEU L 34 GLN L 39 -1 N TYR L 37 O TYR L 88 SHEET 5 AA3 6 PRO L 45 TYR L 50 -1 O ILE L 49 N TRP L 36 SHEET 6 AA3 6 ASN L 54 LEU L 55 -1 O ASN L 54 N TYR L 50 SHEET 1 AA4 4 ILE L 10 THR L 13 0 SHEET 2 AA4 4 THR L 103 MET L 107 1 O LYS L 104 N MET L 11 SHEET 3 AA4 4 ALA L 85 GLN L 91 -1 N ALA L 85 O LEU L 105 SHEET 4 AA4 4 THR L 98 PHE L 99 -1 O THR L 98 N GLN L 91 SHEET 1 AA5 4 THR L 115 PHE L 119 0 SHEET 2 AA5 4 GLY L 130 PHE L 140 -1 O VAL L 134 N PHE L 119 SHEET 3 AA5 4 TYR L 174 THR L 183 -1 O LEU L 182 N ALA L 131 SHEET 4 AA5 4 VAL L 160 TRP L 164 -1 N SER L 163 O SER L 177 SHEET 1 AA6 4 SER L 154 ARG L 156 0 SHEET 2 AA6 4 ILE L 145 ILE L 151 -1 N TRP L 149 O ARG L 156 SHEET 3 AA6 4 SER L 192 HIS L 199 -1 O THR L 198 N ASN L 146 SHEET 4 AA6 4 ILE L 206 ASN L 211 -1 O LYS L 208 N CYS L 195 SHEET 1 AA7 4 GLN H 3 SER H 7 0 SHEET 2 AA7 4 LEU H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 AA7 4 ILE H 78 MET H 83 -1 O LEU H 81 N LEU H 20 SHEET 4 AA7 4 THR H 69 ASP H 73 -1 N THR H 69 O GLU H 82 SHEET 1 AA8 6 LEU H 11 VAL H 12 0 SHEET 2 AA8 6 THR H 113 VAL H 117 1 O THR H 116 N VAL H 12 SHEET 3 AA8 6 ALA H 92 ARG H 98 -1 N TYR H 94 O THR H 113 SHEET 4 AA8 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AA8 6 LEU H 45 ILE H 51 -1 O ILE H 51 N MET H 34 SHEET 6 AA8 6 ILE H 58 TYR H 60 -1 O TYR H 59 N GLU H 50 SHEET 1 AA9 4 LEU H 11 VAL H 12 0 SHEET 2 AA9 4 THR H 113 VAL H 117 1 O THR H 116 N VAL H 12 SHEET 3 AA9 4 ALA H 92 ARG H 98 -1 N TYR H 94 O THR H 113 SHEET 4 AA9 4 TYR H 108 TRP H 109 -1 O TYR H 108 N ARG H 98 SHEET 1 AB1 4 SER H 126 LEU H 130 0 SHEET 2 AB1 4 SER H 141 TYR H 151 -1 O LEU H 147 N TYR H 128 SHEET 3 AB1 4 TYR H 181 THR H 190 -1 O TYR H 181 N TYR H 151 SHEET 4 AB1 4 VAL H 169 LEU H 176 -1 N HIS H 170 O SER H 186 SHEET 1 AB2 3 THR H 157 TRP H 160 0 SHEET 2 AB2 3 THR H 200 HIS H 205 -1 O ALA H 204 N THR H 157 SHEET 3 AB2 3 THR H 210 LYS H 215 -1 O THR H 210 N HIS H 205 SSBOND 1 CYS A 148 CYS A 157 1555 1555 2.05 SSBOND 2 CYS L 23 CYS L 89 1555 1555 2.05 SSBOND 3 CYS L 135 CYS L 195 1555 1555 2.03 SSBOND 4 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 5 CYS H 146 CYS H 201 1555 1555 2.03 LINK O4 BGC B 1 C1 GLC B 2 1555 1555 1.43 LINK O GLY A 42 NA NA A 706 1555 1555 2.26 LINK O ALA A 44 NA NA A 705 1555 1555 2.37 LINK O VAL A 45 NA NA A 706 1555 1555 3.13 LINK OD1 ASP A 46 NA NA A 705 1555 1555 2.69 LINK OD1 ASN A 49 NA NA A 705 1555 1555 2.54 LINK O SER A 320 NA NA A 705 1555 1555 2.67 LINK OG SER A 320 NA NA A 705 1555 1555 2.45 LINK OD1 ASN A 352 NA NA A 705 1555 1555 2.49 LINK O LEU A 417 NA NA A 706 1555 1555 2.67 LINK OD1 ASP A 420 NA NA A 706 1555 1555 2.44 LINK OD2 ASP A 420 NA NA A 706 1555 1555 2.68 LINK OG SER A 421 NA NA A 706 1555 1555 2.46 LINK NA NA A 705 O HOH A 805 1555 1555 2.42 LINK NA NA A 706 O HOH A 801 1555 1555 2.51 CISPEP 1 SER L 7 PRO L 8 0 -2.75 CISPEP 2 TYR L 95 PRO L 96 0 0.14 CISPEP 3 TYR L 141 PRO L 142 0 -3.05 CISPEP 4 THR H 138 GLY H 139 0 4.23 CISPEP 5 PHE H 152 PRO H 153 0 -4.53 CISPEP 6 GLU H 154 PRO H 155 0 0.42 CISPEP 7 TRP H 194 PRO H 195 0 -6.66 CRYST1 96.339 140.125 165.018 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010380 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007136 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006060 0.00000