HEADER SIGNALING PROTEIN/TRANSFERASE 22-JAN-15 4XSG TITLE THE COMPLEX STRUCTURE OF C3CER EXOENZYME AND GTP BOUND RHOA (NADH-FREE TITLE 2 STATE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSFORMING PROTEIN RHOA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-179; COMPND 5 SYNONYM: RHO CDNA CLONE 12,H12; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: ADP-RIBOSYLTRANSFERASE; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RHOA, ARH12, ARHA, RHO12; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX4T-1; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: BACILLUS CEREUS; SOURCE 13 ORGANISM_TAXID: 1396; SOURCE 14 GENE: C3CER; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI DH10B; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 316385; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: DH10B; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PRHAM KEYWDS ADP RIBOSE TRANSFERASES, BACTERIAL TOXINS, SIGNALING PROTEIN- KEYWDS 2 TRANSFERASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.TODA,T.TSURUMURA,T.YOSHIDA,H.TSUGE REVDAT 4 08-NOV-23 4XSG 1 REMARK REVDAT 3 05-FEB-20 4XSG 1 JRNL REMARK REVDAT 2 19-AUG-15 4XSG 1 JRNL REVDAT 1 24-JUN-15 4XSG 0 JRNL AUTH A.TODA,T.TSURUMURA,T.YOSHIDA,Y.TSUMORI,H.TSUGE JRNL TITL RHO GTPASE RECOGNITION BY C3 EXOENZYME BASED ON C3-RHOA JRNL TITL 2 COMPLEX STRUCTURE. JRNL REF J.BIOL.CHEM. V. 290 19423 2015 JRNL REFN ESSN 1083-351X JRNL PMID 26067270 JRNL DOI 10.1074/JBC.M115.653220 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 34457 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1808 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2539 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE SET COUNT : 128 REMARK 3 BIN FREE R VALUE : 0.3260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3069 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 41 REMARK 3 SOLVENT ATOMS : 308 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.05000 REMARK 3 B22 (A**2) : -0.05000 REMARK 3 B33 (A**2) : 0.16000 REMARK 3 B12 (A**2) : -0.03000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.130 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.128 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.100 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.168 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3167 ; 0.009 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3045 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4266 ; 1.350 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7051 ; 0.918 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 379 ; 5.957 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 148 ;33.387 ;24.932 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 601 ;12.856 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;16.142 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 457 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3498 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 680 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1522 ; 3.083 ; 2.876 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1521 ; 3.073 ; 2.875 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1899 ; 4.113 ; 4.298 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1900 ; 4.113 ; 4.300 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1645 ; 4.137 ; 3.366 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1645 ; 4.137 ; 3.366 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2368 ; 6.117 ; 4.837 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 13417 ; 7.766 ;28.217 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 13417 ; 7.766 ;28.217 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 114 REMARK 3 ORIGIN FOR THE GROUP (A): -0.3512 -7.6174 -28.7371 REMARK 3 T TENSOR REMARK 3 T11: 0.0741 T22: 0.0256 REMARK 3 T33: 0.0547 T12: 0.0075 REMARK 3 T13: -0.0224 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.3924 L22: 0.2962 REMARK 3 L33: 0.8339 L12: -0.0359 REMARK 3 L13: 0.1442 L23: -0.0841 REMARK 3 S TENSOR REMARK 3 S11: 0.0145 S12: -0.0298 S13: 0.0330 REMARK 3 S21: -0.0638 S22: 0.0029 S23: 0.0347 REMARK 3 S31: 0.0496 S32: 0.0451 S33: -0.0174 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 115 A 179 REMARK 3 ORIGIN FOR THE GROUP (A): -10.7531 -3.1487 -38.2739 REMARK 3 T TENSOR REMARK 3 T11: 0.1468 T22: 0.0423 REMARK 3 T33: 0.0543 T12: -0.0039 REMARK 3 T13: -0.0611 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 1.4584 L22: 0.1008 REMARK 3 L33: 0.7187 L12: -0.2649 REMARK 3 L13: 0.0660 L23: 0.1216 REMARK 3 S TENSOR REMARK 3 S11: -0.0138 S12: 0.1458 S13: 0.0176 REMARK 3 S21: -0.0642 S22: -0.0471 S23: 0.0332 REMARK 3 S31: -0.0159 S32: -0.1081 S33: 0.0609 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 15 B 61 REMARK 3 ORIGIN FOR THE GROUP (A): 10.2564 -21.7530 -13.5117 REMARK 3 T TENSOR REMARK 3 T11: 0.1280 T22: 0.0660 REMARK 3 T33: 0.0642 T12: 0.0585 REMARK 3 T13: 0.0106 T23: -0.0221 REMARK 3 L TENSOR REMARK 3 L11: 0.3961 L22: 1.0574 REMARK 3 L33: 1.6502 L12: 0.2431 REMARK 3 L13: -0.3170 L23: -0.7841 REMARK 3 S TENSOR REMARK 3 S11: -0.0103 S12: -0.1077 S13: 0.1090 REMARK 3 S21: -0.2049 S22: -0.0664 S23: -0.0238 REMARK 3 S31: 0.3502 S32: 0.2644 S33: 0.0766 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 62 B 146 REMARK 3 ORIGIN FOR THE GROUP (A): -3.1079 -21.5817 -7.9818 REMARK 3 T TENSOR REMARK 3 T11: 0.1393 T22: 0.0082 REMARK 3 T33: 0.0507 T12: -0.0121 REMARK 3 T13: -0.0235 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.2900 L22: 0.4975 REMARK 3 L33: 1.4862 L12: -0.3687 REMARK 3 L13: -0.1904 L23: 0.4326 REMARK 3 S TENSOR REMARK 3 S11: 0.0040 S12: 0.0005 S13: -0.0037 REMARK 3 S21: 0.0335 S22: -0.0156 S23: 0.0168 REMARK 3 S31: 0.3419 S32: -0.0861 S33: 0.0117 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 147 B 155 REMARK 3 ORIGIN FOR THE GROUP (A): 1.0094 -7.6018 -12.4787 REMARK 3 T TENSOR REMARK 3 T11: 0.1352 T22: 0.1220 REMARK 3 T33: 0.1210 T12: 0.0381 REMARK 3 T13: -0.0532 T23: 0.0106 REMARK 3 L TENSOR REMARK 3 L11: 7.3670 L22: 3.9680 REMARK 3 L33: 2.1345 L12: 4.3010 REMARK 3 L13: -3.9542 L23: -2.4340 REMARK 3 S TENSOR REMARK 3 S11: -0.1456 S12: 0.0399 S13: 0.2837 REMARK 3 S21: 0.3057 S22: 0.2919 S23: -0.0313 REMARK 3 S31: 0.0438 S32: -0.0505 S33: -0.1463 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 156 B 196 REMARK 3 ORIGIN FOR THE GROUP (A): 6.4412 -20.2600 -8.9849 REMARK 3 T TENSOR REMARK 3 T11: 0.1457 T22: 0.0376 REMARK 3 T33: 0.0432 T12: 0.0411 REMARK 3 T13: -0.0142 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 0.1721 L22: 0.8699 REMARK 3 L33: 1.0634 L12: -0.2082 REMARK 3 L13: -0.1181 L23: 0.0168 REMARK 3 S TENSOR REMARK 3 S11: 0.0355 S12: -0.0085 S13: 0.0366 REMARK 3 S21: 0.0689 S22: -0.0191 S23: -0.0154 REMARK 3 S31: 0.2284 S32: 0.1493 S33: -0.0163 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 197 B 219 REMARK 3 ORIGIN FOR THE GROUP (A): -4.3292 -8.1995 -1.7298 REMARK 3 T TENSOR REMARK 3 T11: 0.1224 T22: 0.0429 REMARK 3 T33: 0.0428 T12: -0.0079 REMARK 3 T13: 0.0226 T23: 0.0246 REMARK 3 L TENSOR REMARK 3 L11: 1.4996 L22: 1.2806 REMARK 3 L33: 2.3953 L12: -1.3367 REMARK 3 L13: 0.5563 L23: -0.0652 REMARK 3 S TENSOR REMARK 3 S11: 0.0268 S12: 0.1655 S13: -0.0060 REMARK 3 S21: -0.0098 S22: -0.1197 S23: 0.0287 REMARK 3 S31: -0.0716 S32: 0.1685 S33: 0.0929 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4XSG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000206232. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36314 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 39.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.9 REMARK 200 STARTING MODEL: 1A2B, 3BW8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES (PH 6.4), 20% PEG1500, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 90.58067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.29033 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 GLY B 1 REMARK 465 ASN B 2 REMARK 465 ILE B 3 REMARK 465 PRO B 4 REMARK 465 THR B 5 REMARK 465 LYS B 6 REMARK 465 PRO B 7 REMARK 465 LYS B 8 REMARK 465 ASP B 9 REMARK 465 CYS B 10 REMARK 465 ASN B 11 REMARK 465 ASN B 12 REMARK 465 VAL B 13 REMARK 465 ASP B 14 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 27 10.80 80.78 REMARK 500 ASN A 123 51.19 -103.66 REMARK 500 LYS A 164 -5.67 74.08 REMARK 500 ASN B 50 109.08 -176.53 REMARK 500 ASP B 119 109.74 -54.11 REMARK 500 ASN B 173 29.35 -146.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 19 OG1 REMARK 620 2 THR A 37 O 94.7 REMARK 620 3 GSP A 201 O2G 177.1 88.1 REMARK 620 4 GSP A 201 O2B 84.4 169.9 92.9 REMARK 620 5 HOH A 322 O 88.5 82.8 92.5 87.1 REMARK 620 6 HOH A 337 O 86.2 97.6 92.9 92.3 174.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GY2 RELATED DB: PDB REMARK 900 RELATED ID: 4H03 RELATED DB: PDB REMARK 900 RELATED ID: 4XSH RELATED DB: PDB REMARK 900 RELATED ID: 5BWM RELATED DB: PDB DBREF 4XSG A 1 179 UNP P61586 RHOA_HUMAN 1 179 DBREF 4XSG B 1 219 UNP Q8KNY0 Q8KNY0_BACCE 1 219 SEQADV 4XSG ASN A 25 UNP P61586 PHE 25 ENGINEERED MUTATION SEQRES 1 A 179 MET ALA ALA ILE ARG LYS LYS LEU VAL ILE VAL GLY ASP SEQRES 2 A 179 GLY ALA CYS GLY LYS THR CYS LEU LEU ILE VAL ASN SER SEQRES 3 A 179 LYS ASP GLN PHE PRO GLU VAL TYR VAL PRO THR VAL PHE SEQRES 4 A 179 GLU ASN TYR VAL ALA ASP ILE GLU VAL ASP GLY LYS GLN SEQRES 5 A 179 VAL GLU LEU ALA LEU TRP ASP THR ALA GLY GLN GLU ASP SEQRES 6 A 179 TYR ASP ARG LEU ARG PRO LEU SER TYR PRO ASP THR ASP SEQRES 7 A 179 VAL ILE LEU MET CYS PHE SER ILE ASP SER PRO ASP SER SEQRES 8 A 179 LEU GLU ASN ILE PRO GLU LYS TRP THR PRO GLU VAL LYS SEQRES 9 A 179 HIS PHE CYS PRO ASN VAL PRO ILE ILE LEU VAL GLY ASN SEQRES 10 A 179 LYS LYS ASP LEU ARG ASN ASP GLU HIS THR ARG ARG GLU SEQRES 11 A 179 LEU ALA LYS MET LYS GLN GLU PRO VAL LYS PRO GLU GLU SEQRES 12 A 179 GLY ARG ASP MET ALA ASN ARG ILE GLY ALA PHE GLY TYR SEQRES 13 A 179 MET GLU CYS SER ALA LYS THR LYS ASP GLY VAL ARG GLU SEQRES 14 A 179 VAL PHE GLU MET ALA THR ARG ALA ALA LEU SEQRES 1 B 219 GLY ASN ILE PRO THR LYS PRO LYS ASP CYS ASN ASN VAL SEQRES 2 B 219 ASP LYS TYR LYS LEU CYS THR ASN LYS GLU GLU ALA ASP SEQRES 3 B 219 ALA TRP GLY LYS LYS GLN PHE ASN LYS TRP SER LYS GLU SEQRES 4 B 219 GLU LYS SER ALA ILE ARG ASP TYR THR LYS ASN ALA ARG SEQRES 5 B 219 PRO TYR ASN GLU PHE LEU ARG MET HIS ALA GLY LYS LEU SEQRES 6 B 219 ASP SER ASP PRO THR MET LYS LYS LYS ILE GLU SER LEU SEQRES 7 B 219 ASP LYS ALA LEU ASN ARG LYS GLU ALA LYS VAL ASN ASP SEQRES 8 B 219 ASN ILE LYS VAL TYR ARG GLY ASP ASP ALA TRP ILE PHE SEQRES 9 B 219 GLY LYS GLU TYR ASP ASN SER ILE ILE LYS ASN GLY LYS SEQRES 10 B 219 VAL ASP ARG GLU LYS PHE LYS GLU ILE GLN LYS LYS PHE SEQRES 11 B 219 GLN GLY LYS THR THR THR GLU PHE GLY TYR ILE SER THR SEQRES 12 B 219 SER ILE LEU ILE ASP ALA GLY TYR ALA LYS THR ARG PRO SEQRES 13 B 219 VAL MET THR GLU PHE LYS VAL GLY SER GLY THR HIS GLY SEQRES 14 B 219 ALA TYR MET ASN SER ASP ASP LEU THR ALA TYR PRO GLY SEQRES 15 B 219 GLN TYR GLU LEU LEU LEU PRO ARG ASN THR VAL TYR LYS SEQRES 16 B 219 ILE GLU LYS ILE TYR ILE ALA ILE ASP ASN ASN THR GLN SEQRES 17 B 219 LYS GLU GLN ILE LYS VAL GLU ALA THR ILE LYS HET GSP A 201 32 HET MG A 202 1 HET EDO B 301 4 HET EDO B 302 4 HETNAM GSP 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 GSP C10 H16 N5 O13 P3 S FORMUL 4 MG MG 2+ FORMUL 5 EDO 2(C2 H6 O2) FORMUL 7 HOH *308(H2 O) HELIX 1 AA1 GLY A 17 SER A 26 1 10 HELIX 2 AA2 GLN A 63 ASP A 67 5 5 HELIX 3 AA3 LEU A 69 TYR A 74 5 6 HELIX 4 AA4 SER A 88 LYS A 98 1 11 HELIX 5 AA5 LYS A 98 CYS A 107 1 10 HELIX 6 AA6 LYS A 118 ARG A 122 5 5 HELIX 7 AA7 ASP A 124 LYS A 133 1 10 HELIX 8 AA8 LYS A 140 GLY A 152 1 13 HELIX 9 AA9 GLY A 166 LEU A 179 1 14 HELIX 10 AB1 ASN B 21 LYS B 31 1 11 HELIX 11 AB2 SER B 37 ASN B 50 1 14 HELIX 12 AB3 ALA B 51 HIS B 61 1 11 HELIX 13 AB4 ASP B 68 ARG B 84 1 17 HELIX 14 AB5 ASP B 100 GLY B 105 5 6 HELIX 15 AB6 ASP B 109 SER B 111 5 3 HELIX 16 AB7 ASP B 119 GLN B 131 1 13 SHEET 1 AA1 6 TYR A 42 VAL A 48 0 SHEET 2 AA1 6 LYS A 51 TRP A 58 -1 O LEU A 55 N ALA A 44 SHEET 3 AA1 6 ARG A 5 GLY A 12 1 N LEU A 8 O ALA A 56 SHEET 4 AA1 6 VAL A 79 SER A 85 1 O CYS A 83 N VAL A 11 SHEET 5 AA1 6 ILE A 112 ASN A 117 1 O ASN A 117 N PHE A 84 SHEET 6 AA1 6 GLY A 155 GLU A 158 1 O MET A 157 N GLY A 116 SHEET 1 AA2 5 ILE B 93 ASP B 99 0 SHEET 2 AA2 5 VAL B 157 VAL B 163 -1 O THR B 159 N ARG B 97 SHEET 3 AA2 5 GLU B 210 ILE B 218 1 O ALA B 216 N GLU B 160 SHEET 4 AA2 5 THR B 192 ILE B 203 -1 N TYR B 200 O LYS B 213 SHEET 5 AA2 5 THR B 134 GLU B 137 -1 N THR B 135 O TYR B 194 SHEET 1 AA3 2 ILE B 113 LYS B 114 0 SHEET 2 AA3 2 LYS B 117 VAL B 118 -1 O LYS B 117 N LYS B 114 SHEET 1 AA4 3 ILE B 141 SER B 144 0 SHEET 2 AA4 3 GLU B 185 LEU B 188 -1 O LEU B 188 N ILE B 141 SHEET 3 AA4 3 ALA B 170 MET B 172 -1 N ALA B 170 O LEU B 187 LINK OG1 THR A 19 MG MG A 202 1555 1555 2.08 LINK O THR A 37 MG MG A 202 1555 1555 2.11 LINK O2G GSP A 201 MG MG A 202 1555 1555 2.06 LINK O2B GSP A 201 MG MG A 202 1555 1555 2.11 LINK MG MG A 202 O HOH A 322 1555 1555 2.16 LINK MG MG A 202 O HOH A 337 1555 1555 2.07 SITE 1 AC1 24 GLY A 14 ALA A 15 CYS A 16 GLY A 17 SITE 2 AC1 24 LYS A 18 THR A 19 CYS A 20 PHE A 30 SITE 3 AC1 24 THR A 37 GLY A 62 LYS A 118 ASP A 120 SITE 4 AC1 24 LEU A 121 SER A 160 ALA A 161 LYS A 162 SITE 5 AC1 24 MG A 202 HOH A 319 HOH A 322 HOH A 337 SITE 6 AC1 24 HOH A 352 HOH A 400 HOH A 406 HOH A 430 SITE 1 AC2 5 THR A 19 THR A 37 GSP A 201 HOH A 322 SITE 2 AC2 5 HOH A 337 SITE 1 AC3 7 LYS A 6 ARG B 45 ASP B 175 ALA B 179 SITE 2 AC3 7 PRO B 181 HOH B 435 HOH B 454 SITE 1 AC4 7 GLN B 32 PHE B 33 TRP B 36 LYS B 88 SITE 2 AC4 7 GLY B 169 ALA B 170 TYR B 171 CRYST1 50.745 50.745 135.871 90.00 90.00 120.00 P 32 3 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019706 0.011377 0.000000 0.00000 SCALE2 0.000000 0.022755 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007360 0.00000