HEADER TRANSLATION 26-JAN-15 4XUM TITLE PPARGAMMA LIGAND BINDING DOMAIN IN COMPLEX WITH INDOMETHACIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PPAR-GAMMA,NUCLEAR RECEPTOR SUBFAMILY 1 GROUP C MEMBER 3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPARG, NR1C3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PPARGAMMA, NUCLEAR RECEPTOR, TRANSCRIPTION FACTOR, NSAIDS, KEYWDS 2 INDOMETHACIN, TRANSLATION EXPDTA X-RAY DIFFRACTION AUTHOR A.C.PUHL,P.WEBB,I.POLIKARPOV REVDAT 2 28-FEB-24 4XUM 1 REMARK REVDAT 1 04-NOV-15 4XUM 0 JRNL AUTH A.C.PUHL,F.A.MILTON,A.CVORO,D.H.SIEGLAFF,J.C.CAMPOS, JRNL AUTH 2 A.BERNARDES,C.S.FILGUEIRA,J.L.LINDEMANN,T.DENG,F.A.NEVES, JRNL AUTH 3 I.POLIKARPOV,P.WEBB JRNL TITL MECHANISMS OF PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR JRNL TITL 2 GAMMA REGULATION BY NON-STEROIDAL ANTI-INFLAMMATORY DRUGS. JRNL REF NUCL RECEPT SIGNAL V. 13 E004 2015 JRNL REFN ISSN 1550-7629 JRNL PMID 26445566 JRNL DOI 10.1621/NRS.13004 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 26036 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1322 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.3408 - 4.9884 0.99 2796 156 0.1728 0.1987 REMARK 3 2 4.9884 - 3.9610 1.00 2747 163 0.1508 0.1937 REMARK 3 3 3.9610 - 3.4608 1.00 2755 144 0.1722 0.2462 REMARK 3 4 3.4608 - 3.1445 1.00 2772 143 0.2158 0.3025 REMARK 3 5 3.1445 - 2.9193 1.00 2746 127 0.2408 0.3189 REMARK 3 6 2.9193 - 2.7472 1.00 2738 137 0.2176 0.3150 REMARK 3 7 2.7472 - 2.6097 1.00 2729 151 0.2255 0.2564 REMARK 3 8 2.6097 - 2.4961 1.00 2713 150 0.2412 0.3460 REMARK 3 9 2.4961 - 2.4000 1.00 2718 151 0.2564 0.3102 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 51.11 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4163 REMARK 3 ANGLE : 1.076 5660 REMARK 3 CHIRALITY : 0.043 664 REMARK 3 PLANARITY : 0.005 719 REMARK 3 DIHEDRAL : 13.215 1494 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 207 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6967 -6.0022 13.7797 REMARK 3 T TENSOR REMARK 3 T11: 0.3981 T22: 0.6056 REMARK 3 T33: 0.4639 T12: 0.1084 REMARK 3 T13: -0.0026 T23: 0.0871 REMARK 3 L TENSOR REMARK 3 L11: 3.1872 L22: 2.1960 REMARK 3 L33: 7.0739 L12: -0.2168 REMARK 3 L13: -1.3453 L23: -1.2090 REMARK 3 S TENSOR REMARK 3 S11: -0.1888 S12: -0.3609 S13: -0.1152 REMARK 3 S21: 0.2171 S22: 0.4480 S23: 0.4378 REMARK 3 S31: -0.1482 S32: -0.6312 S33: -0.2397 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 239 THROUGH 251 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3277 5.2232 -3.8404 REMARK 3 T TENSOR REMARK 3 T11: 0.5900 T22: 0.7814 REMARK 3 T33: 0.4423 T12: -0.0532 REMARK 3 T13: 0.0251 T23: 0.0122 REMARK 3 L TENSOR REMARK 3 L11: 4.8850 L22: 6.4051 REMARK 3 L33: 9.7407 L12: 4.0005 REMARK 3 L13: 6.8797 L23: 5.6986 REMARK 3 S TENSOR REMARK 3 S11: 0.0568 S12: 2.1373 S13: 0.4943 REMARK 3 S21: 0.2480 S22: 0.1560 S23: 0.4193 REMARK 3 S31: -0.5918 S32: -0.0002 S33: -0.0689 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 252 THROUGH 276 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4710 16.8230 0.5109 REMARK 3 T TENSOR REMARK 3 T11: 1.5667 T22: 0.8625 REMARK 3 T33: 0.7747 T12: -0.4522 REMARK 3 T13: 0.1344 T23: 0.0354 REMARK 3 L TENSOR REMARK 3 L11: 8.0746 L22: 6.4369 REMARK 3 L33: 7.1686 L12: 2.3241 REMARK 3 L13: 4.9997 L23: 1.2391 REMARK 3 S TENSOR REMARK 3 S11: -0.5113 S12: 0.7191 S13: 0.7502 REMARK 3 S21: -0.2981 S22: 0.1613 S23: 0.0046 REMARK 3 S31: -1.8735 S32: 0.8588 S33: 0.2422 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 277 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2981 9.2743 17.4346 REMARK 3 T TENSOR REMARK 3 T11: 0.7451 T22: 0.7133 REMARK 3 T33: 0.4993 T12: 0.0897 REMARK 3 T13: -0.1213 T23: 0.0159 REMARK 3 L TENSOR REMARK 3 L11: 4.1993 L22: 5.7626 REMARK 3 L33: 8.3553 L12: 3.9580 REMARK 3 L13: -5.5743 L23: -4.1605 REMARK 3 S TENSOR REMARK 3 S11: -0.2234 S12: 0.0603 S13: 0.8841 REMARK 3 S21: -0.0620 S22: 0.4284 S23: 0.3935 REMARK 3 S31: -0.9653 S32: 0.1651 S33: -0.2305 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 303 THROUGH 377 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.5706 0.9049 15.5390 REMARK 3 T TENSOR REMARK 3 T11: 0.4427 T22: 0.5835 REMARK 3 T33: 0.4072 T12: 0.0984 REMARK 3 T13: -0.0130 T23: 0.0411 REMARK 3 L TENSOR REMARK 3 L11: 2.5196 L22: 2.3576 REMARK 3 L33: 6.7045 L12: 1.0898 REMARK 3 L13: -1.7340 L23: -0.7951 REMARK 3 S TENSOR REMARK 3 S11: -0.2656 S12: -0.3663 S13: -0.2235 REMARK 3 S21: 0.0274 S22: 0.1067 S23: -0.3082 REMARK 3 S31: -0.2328 S32: 0.8762 S33: 0.1670 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 378 THROUGH 402 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7432 -7.3540 25.0928 REMARK 3 T TENSOR REMARK 3 T11: 0.4664 T22: 0.6333 REMARK 3 T33: 0.4983 T12: 0.2400 REMARK 3 T13: 0.0283 T23: 0.1484 REMARK 3 L TENSOR REMARK 3 L11: 2.1887 L22: 1.6544 REMARK 3 L33: 6.8008 L12: 1.3569 REMARK 3 L13: -0.0505 L23: -0.6414 REMARK 3 S TENSOR REMARK 3 S11: -0.2033 S12: -0.6721 S13: -0.2547 REMARK 3 S21: 0.3500 S22: 0.2227 S23: -0.2989 REMARK 3 S31: 0.3499 S32: 0.7305 S33: 0.1179 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 403 THROUGH 430 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.8280 -16.5473 23.8766 REMARK 3 T TENSOR REMARK 3 T11: 0.6327 T22: 0.6395 REMARK 3 T33: 0.7007 T12: 0.2057 REMARK 3 T13: 0.0430 T23: 0.2243 REMARK 3 L TENSOR REMARK 3 L11: 3.0265 L22: 5.0172 REMARK 3 L33: 2.3847 L12: 0.7444 REMARK 3 L13: 1.5473 L23: 1.3996 REMARK 3 S TENSOR REMARK 3 S11: -0.1469 S12: -0.5361 S13: -0.6983 REMARK 3 S21: 0.6379 S22: 0.5581 S23: -0.0993 REMARK 3 S31: 1.2633 S32: -0.0974 S33: -0.4573 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 431 THROUGH 459 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.7380 -3.2471 21.5802 REMARK 3 T TENSOR REMARK 3 T11: 0.5249 T22: 0.8106 REMARK 3 T33: 0.6505 T12: 0.1976 REMARK 3 T13: -0.0289 T23: 0.1383 REMARK 3 L TENSOR REMARK 3 L11: 5.8539 L22: 4.1720 REMARK 3 L33: 2.1312 L12: 4.8301 REMARK 3 L13: 0.0480 L23: 0.4336 REMARK 3 S TENSOR REMARK 3 S11: -0.0195 S12: -0.5890 S13: -0.8796 REMARK 3 S21: 0.3228 S22: -0.0140 S23: -1.3828 REMARK 3 S31: 0.3138 S32: 0.8229 S33: 0.1604 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 460 THROUGH 477 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.0101 12.0250 25.7967 REMARK 3 T TENSOR REMARK 3 T11: 0.7443 T22: 0.9840 REMARK 3 T33: 0.5385 T12: 0.0447 REMARK 3 T13: -0.0670 T23: -0.0953 REMARK 3 L TENSOR REMARK 3 L11: 7.7941 L22: 7.6152 REMARK 3 L33: 1.3970 L12: 4.5899 REMARK 3 L13: -1.3648 L23: 1.6044 REMARK 3 S TENSOR REMARK 3 S11: 0.5498 S12: -1.3890 S13: 0.4071 REMARK 3 S21: 1.2708 S22: -0.3414 S23: 0.0441 REMARK 3 S31: -0.1300 S32: 0.7436 S33: -0.0164 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 207 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.7705 -34.9106 33.4443 REMARK 3 T TENSOR REMARK 3 T11: 0.7721 T22: 0.4518 REMARK 3 T33: 0.5343 T12: 0.1447 REMARK 3 T13: 0.0436 T23: 0.1186 REMARK 3 L TENSOR REMARK 3 L11: 6.2397 L22: 1.8304 REMARK 3 L33: 9.4728 L12: 1.6134 REMARK 3 L13: 3.6787 L23: 0.6753 REMARK 3 S TENSOR REMARK 3 S11: 0.1070 S12: -0.6295 S13: -0.6266 REMARK 3 S21: 0.3183 S22: -0.0010 S23: -0.1288 REMARK 3 S31: 0.5663 S32: -0.5707 S33: -0.1454 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 238 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.1082 -23.7193 43.1892 REMARK 3 T TENSOR REMARK 3 T11: 0.8851 T22: 1.1411 REMARK 3 T33: 0.5848 T12: 0.1122 REMARK 3 T13: 0.0273 T23: 0.0446 REMARK 3 L TENSOR REMARK 3 L11: 4.3617 L22: 2.2200 REMARK 3 L33: 3.5886 L12: 1.0565 REMARK 3 L13: 1.6885 L23: 0.2040 REMARK 3 S TENSOR REMARK 3 S11: 0.0372 S12: -1.0070 S13: -0.0063 REMARK 3 S21: 0.7696 S22: -0.1138 S23: -0.1334 REMARK 3 S31: -0.1019 S32: 1.0087 S33: 0.0234 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 303 THROUGH 333 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.8793 -25.2849 23.5238 REMARK 3 T TENSOR REMARK 3 T11: 0.5613 T22: 0.4178 REMARK 3 T33: 0.4801 T12: 0.2060 REMARK 3 T13: 0.0094 T23: 0.0401 REMARK 3 L TENSOR REMARK 3 L11: 5.2228 L22: 1.0113 REMARK 3 L33: 6.7300 L12: 1.1320 REMARK 3 L13: -0.9348 L23: -2.0118 REMARK 3 S TENSOR REMARK 3 S11: -0.0626 S12: -0.1243 S13: -0.2916 REMARK 3 S21: 0.1686 S22: 0.0389 S23: -0.0201 REMARK 3 S31: -0.3534 S32: 0.1689 S33: -0.0287 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 334 THROUGH 364 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.9524 -16.0536 46.5613 REMARK 3 T TENSOR REMARK 3 T11: 1.2810 T22: 0.9841 REMARK 3 T33: 0.5126 T12: -0.0260 REMARK 3 T13: 0.0837 T23: -0.0604 REMARK 3 L TENSOR REMARK 3 L11: 7.9170 L22: 4.8413 REMARK 3 L33: 2.2297 L12: 4.8250 REMARK 3 L13: -2.5799 L23: -3.6900 REMARK 3 S TENSOR REMARK 3 S11: 0.3000 S12: -1.0170 S13: 0.5215 REMARK 3 S21: 0.5405 S22: -0.2122 S23: 0.0779 REMARK 3 S31: -1.0369 S32: 1.1746 S33: -0.1143 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 365 THROUGH 430 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1105 -24.5382 27.0862 REMARK 3 T TENSOR REMARK 3 T11: 0.5556 T22: 0.4872 REMARK 3 T33: 0.5694 T12: 0.2133 REMARK 3 T13: 0.0455 T23: 0.0555 REMARK 3 L TENSOR REMARK 3 L11: 2.8037 L22: 2.2618 REMARK 3 L33: 5.7573 L12: 0.1106 REMARK 3 L13: -0.2263 L23: -1.2640 REMARK 3 S TENSOR REMARK 3 S11: -0.0334 S12: -0.2216 S13: -0.1771 REMARK 3 S21: 0.1143 S22: -0.0028 S23: 0.4728 REMARK 3 S31: -0.1828 S32: -0.4015 S33: 0.0399 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 431 THROUGH 459 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9759 -13.3420 29.8209 REMARK 3 T TENSOR REMARK 3 T11: 0.8175 T22: 0.5357 REMARK 3 T33: 0.7945 T12: 0.0447 REMARK 3 T13: -0.0000 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 2.7746 L22: 4.5990 REMARK 3 L33: 8.3845 L12: 3.3934 REMARK 3 L13: -1.3497 L23: -1.6198 REMARK 3 S TENSOR REMARK 3 S11: 0.5075 S12: -0.0713 S13: 0.8179 REMARK 3 S21: 0.6327 S22: -0.2638 S23: -0.1530 REMARK 3 S31: -2.0104 S32: 0.4470 S33: -0.1886 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 460 THROUGH 477 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.8396 -17.4472 31.7603 REMARK 3 T TENSOR REMARK 3 T11: 1.2284 T22: 0.9564 REMARK 3 T33: 0.7188 T12: -0.0471 REMARK 3 T13: 0.0656 T23: 0.0298 REMARK 3 L TENSOR REMARK 3 L11: 5.8934 L22: 4.5128 REMARK 3 L33: 5.1094 L12: -4.8655 REMARK 3 L13: -5.4258 L23: 4.6588 REMARK 3 S TENSOR REMARK 3 S11: -0.0883 S12: -0.7288 S13: 0.9963 REMARK 3 S21: -0.3106 S22: 0.6714 S23: 0.7482 REMARK 3 S31: -2.1066 S32: 1.3551 S33: -0.6173 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 2154 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XUM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000206315. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.4586 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26080 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 115.893 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.50200 REMARK 200 R SYM FOR SHELL (I) : 0.50200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.95 M SODIUM CITRATE AND 0.1 M HEPES REMARK 280 PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 46.52000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.07000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 46.52000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.07000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 200 REMARK 465 SER A 201 REMARK 465 HIS A 202 REMARK 465 MET A 203 REMARK 465 LEU A 204 REMARK 465 ASN A 205 REMARK 465 PRO A 206 REMARK 465 PHE A 264 REMARK 465 LYS A 265 REMARK 465 HIS A 266 REMARK 465 ILE A 267 REMARK 465 THR A 268 REMARK 465 PRO A 269 REMARK 465 LEU A 270 REMARK 465 GLN A 271 REMARK 465 GLU A 272 REMARK 465 GLN A 273 REMARK 465 SER A 274 REMARK 465 GLY B 200 REMARK 465 SER B 201 REMARK 465 HIS B 202 REMARK 465 MET B 203 REMARK 465 LEU B 204 REMARK 465 ASN B 205 REMARK 465 PRO B 206 REMARK 465 LYS B 240 REMARK 465 THR B 241 REMARK 465 THR B 242 REMARK 465 ASP B 243 REMARK 465 LYS B 244 REMARK 465 LEU B 270 REMARK 465 GLN B 271 REMARK 465 GLU B 272 REMARK 465 GLN B 273 REMARK 465 SER B 274 REMARK 465 LYS B 275 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 216 CG CD CE NZ REMARK 470 LYS A 240 CG CD CE NZ REMARK 470 MET A 256 CG SD CE REMARK 470 MET A 257 CG SD CE REMARK 470 ASP A 260 CG OD1 OD2 REMARK 470 LYS A 261 CD CE NZ REMARK 470 LYS A 263 CD CE NZ REMARK 470 LYS A 275 CG CD CE NZ REMARK 470 PHE A 287 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 298 CD OE1 OE2 REMARK 470 LYS A 354 CG CD CE NZ REMARK 470 LYS A 358 CE NZ REMARK 470 LYS A 373 CG CD CE NZ REMARK 470 LYS A 422 CG CD CE NZ REMARK 470 LYS A 434 CG CD CE NZ REMARK 470 LEU A 452 CG CD1 CD2 REMARK 470 LYS A 457 CG CD CE NZ REMARK 470 LYS A 474 CG CD CE NZ REMARK 470 ASP A 475 CG OD1 OD2 REMARK 470 LYS B 216 CD CE NZ REMARK 470 LYS B 224 CD CE NZ REMARK 470 ASP B 260 CG OD1 OD2 REMARK 470 LYS B 261 CD CE NZ REMARK 470 LYS B 263 CG CD CE NZ REMARK 470 ILE B 279 CG1 CG2 CD1 REMARK 470 ARG B 280 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 283 CD OE1 NE2 REMARK 470 LYS B 336 CE NZ REMARK 470 LYS B 354 CD CE NZ REMARK 470 LYS B 358 CG CD CE NZ REMARK 470 PHE B 363 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 367 CE NZ REMARK 470 GLU B 369 CG CD OE1 OE2 REMARK 470 LYS B 373 CG CD CE NZ REMARK 470 LYS B 422 CD CE NZ REMARK 470 GLU B 427 CG CD OE1 OE2 REMARK 470 GLN B 444 CG CD OE1 NE2 REMARK 470 GLU B 448 CG CD OE1 OE2 REMARK 470 GLN B 451 CG CD OE1 NE2 REMARK 470 LEU B 452 CG CD1 CD2 REMARK 470 GLN B 454 CG CD OE1 NE2 REMARK 470 LYS B 457 CG CD CE NZ REMARK 470 LYS B 458 CG CD CE NZ REMARK 470 GLU B 460 CG CD OE1 OE2 REMARK 470 THR B 461 OG1 CG2 REMARK 470 ASP B 462 CG OD1 OD2 REMARK 470 MET B 463 CG SD CE REMARK 470 SER B 464 OG REMARK 470 LEU B 465 CG CD1 CD2 REMARK 470 GLN B 470 CG CD OE1 NE2 REMARK 470 LYS B 474 CD CE NZ REMARK 470 ASP B 475 CG OD1 OD2 REMARK 470 TYR B 477 CG CD1 CD2 CE1 CE2 CZ OH REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN B 283 CG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR B 327 ND1 HIS B 449 2.16 REMARK 500 OD1 ASP A 251 OG SER A 254 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 238 -82.73 -113.47 REMARK 500 TYR B 473 49.15 -96.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMN B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4XTA RELATED DB: PDB REMARK 900 SAME PROTEIN WITH DIFFERENT LIGANDS REMARK 900 RELATED ID: 4XUH RELATED DB: PDB REMARK 900 SAME PROTEIN WITH DIFFERENT LIGANDS DBREF 4XUM A 204 477 UNP P37231 PPARG_HUMAN 232 505 DBREF 4XUM B 204 477 UNP P37231 PPARG_HUMAN 232 505 SEQADV 4XUM GLY A 200 UNP P37231 EXPRESSION TAG SEQADV 4XUM SER A 201 UNP P37231 EXPRESSION TAG SEQADV 4XUM HIS A 202 UNP P37231 EXPRESSION TAG SEQADV 4XUM MET A 203 UNP P37231 EXPRESSION TAG SEQADV 4XUM GLY B 200 UNP P37231 EXPRESSION TAG SEQADV 4XUM SER B 201 UNP P37231 EXPRESSION TAG SEQADV 4XUM HIS B 202 UNP P37231 EXPRESSION TAG SEQADV 4XUM MET B 203 UNP P37231 EXPRESSION TAG SEQRES 1 A 278 GLY SER HIS MET LEU ASN PRO GLU SER ALA ASP LEU ARG SEQRES 2 A 278 ALA LEU ALA LYS HIS LEU TYR ASP SER TYR ILE LYS SER SEQRES 3 A 278 PHE PRO LEU THR LYS ALA LYS ALA ARG ALA ILE LEU THR SEQRES 4 A 278 GLY LYS THR THR ASP LYS SER PRO PHE VAL ILE TYR ASP SEQRES 5 A 278 MET ASN SER LEU MET MET GLY GLU ASP LYS ILE LYS PHE SEQRES 6 A 278 LYS HIS ILE THR PRO LEU GLN GLU GLN SER LYS GLU VAL SEQRES 7 A 278 ALA ILE ARG ILE PHE GLN GLY CYS GLN PHE ARG SER VAL SEQRES 8 A 278 GLU ALA VAL GLN GLU ILE THR GLU TYR ALA LYS SER ILE SEQRES 9 A 278 PRO GLY PHE VAL ASN LEU ASP LEU ASN ASP GLN VAL THR SEQRES 10 A 278 LEU LEU LYS TYR GLY VAL HIS GLU ILE ILE TYR THR MET SEQRES 11 A 278 LEU ALA SER LEU MET ASN LYS ASP GLY VAL LEU ILE SER SEQRES 12 A 278 GLU GLY GLN GLY PHE MET THR ARG GLU PHE LEU LYS SER SEQRES 13 A 278 LEU ARG LYS PRO PHE GLY ASP PHE MET GLU PRO LYS PHE SEQRES 14 A 278 GLU PHE ALA VAL LYS PHE ASN ALA LEU GLU LEU ASP ASP SEQRES 15 A 278 SER ASP LEU ALA ILE PHE ILE ALA VAL ILE ILE LEU SER SEQRES 16 A 278 GLY ASP ARG PRO GLY LEU LEU ASN VAL LYS PRO ILE GLU SEQRES 17 A 278 ASP ILE GLN ASP ASN LEU LEU GLN ALA LEU GLU LEU GLN SEQRES 18 A 278 LEU LYS LEU ASN HIS PRO GLU SER SER GLN LEU PHE ALA SEQRES 19 A 278 LYS LEU LEU GLN LYS MET THR ASP LEU ARG GLN ILE VAL SEQRES 20 A 278 THR GLU HIS VAL GLN LEU LEU GLN VAL ILE LYS LYS THR SEQRES 21 A 278 GLU THR ASP MET SER LEU HIS PRO LEU LEU GLN GLU ILE SEQRES 22 A 278 TYR LYS ASP LEU TYR SEQRES 1 B 278 GLY SER HIS MET LEU ASN PRO GLU SER ALA ASP LEU ARG SEQRES 2 B 278 ALA LEU ALA LYS HIS LEU TYR ASP SER TYR ILE LYS SER SEQRES 3 B 278 PHE PRO LEU THR LYS ALA LYS ALA ARG ALA ILE LEU THR SEQRES 4 B 278 GLY LYS THR THR ASP LYS SER PRO PHE VAL ILE TYR ASP SEQRES 5 B 278 MET ASN SER LEU MET MET GLY GLU ASP LYS ILE LYS PHE SEQRES 6 B 278 LYS HIS ILE THR PRO LEU GLN GLU GLN SER LYS GLU VAL SEQRES 7 B 278 ALA ILE ARG ILE PHE GLN GLY CYS GLN PHE ARG SER VAL SEQRES 8 B 278 GLU ALA VAL GLN GLU ILE THR GLU TYR ALA LYS SER ILE SEQRES 9 B 278 PRO GLY PHE VAL ASN LEU ASP LEU ASN ASP GLN VAL THR SEQRES 10 B 278 LEU LEU LYS TYR GLY VAL HIS GLU ILE ILE TYR THR MET SEQRES 11 B 278 LEU ALA SER LEU MET ASN LYS ASP GLY VAL LEU ILE SER SEQRES 12 B 278 GLU GLY GLN GLY PHE MET THR ARG GLU PHE LEU LYS SER SEQRES 13 B 278 LEU ARG LYS PRO PHE GLY ASP PHE MET GLU PRO LYS PHE SEQRES 14 B 278 GLU PHE ALA VAL LYS PHE ASN ALA LEU GLU LEU ASP ASP SEQRES 15 B 278 SER ASP LEU ALA ILE PHE ILE ALA VAL ILE ILE LEU SER SEQRES 16 B 278 GLY ASP ARG PRO GLY LEU LEU ASN VAL LYS PRO ILE GLU SEQRES 17 B 278 ASP ILE GLN ASP ASN LEU LEU GLN ALA LEU GLU LEU GLN SEQRES 18 B 278 LEU LYS LEU ASN HIS PRO GLU SER SER GLN LEU PHE ALA SEQRES 19 B 278 LYS LEU LEU GLN LYS MET THR ASP LEU ARG GLN ILE VAL SEQRES 20 B 278 THR GLU HIS VAL GLN LEU LEU GLN VAL ILE LYS LYS THR SEQRES 21 B 278 GLU THR ASP MET SER LEU HIS PRO LEU LEU GLN GLU ILE SEQRES 22 B 278 TYR LYS ASP LEU TYR HET IMN A 501 25 HET IMN A 502 25 HET IMN B 501 25 HETNAM IMN INDOMETHACIN FORMUL 3 IMN 3(C19 H16 CL N O4) FORMUL 6 HOH *66(H2 O) HELIX 1 AA1 GLU A 207 PHE A 226 1 20 HELIX 2 AA2 THR A 229 GLY A 239 1 11 HELIX 3 AA3 ASP A 251 ILE A 262 1 12 HELIX 4 AA4 GLU A 276 LYS A 301 1 26 HELIX 5 AA5 ASP A 310 ALA A 331 1 22 HELIX 6 AA6 SER A 342 GLY A 344 5 3 HELIX 7 AA7 ARG A 350 SER A 355 1 6 HELIX 8 AA8 PRO A 359 PHE A 363 5 5 HELIX 9 AA9 MET A 364 ALA A 376 1 13 HELIX 10 AB1 ASP A 380 LEU A 393 1 14 HELIX 11 AB2 ASN A 402 HIS A 425 1 24 HELIX 12 AB3 GLN A 430 GLU A 460 1 31 HELIX 13 AB4 HIS A 466 LYS A 474 1 9 HELIX 14 AB5 SER B 208 PHE B 226 1 19 HELIX 15 AB6 THR B 229 THR B 238 1 10 HELIX 16 AB7 ASP B 251 ILE B 262 1 12 HELIX 17 AB8 VAL B 277 LYS B 301 1 25 HELIX 18 AB9 ASP B 310 LEU B 333 1 24 HELIX 19 AC1 SER B 342 GLY B 344 5 3 HELIX 20 AC2 ARG B 350 SER B 355 1 6 HELIX 21 AC3 PRO B 359 PHE B 363 5 5 HELIX 22 AC4 MET B 364 ALA B 376 1 13 HELIX 23 AC5 ASP B 380 LEU B 393 1 14 HELIX 24 AC6 ASN B 402 HIS B 425 1 24 HELIX 25 AC7 GLN B 430 GLU B 460 1 31 HELIX 26 AC8 HIS B 466 TYR B 473 1 8 SHEET 1 AA1 4 PHE A 247 ILE A 249 0 SHEET 2 AA1 4 GLY A 346 THR A 349 1 O PHE A 347 N ILE A 249 SHEET 3 AA1 4 GLY A 338 ILE A 341 -1 N VAL A 339 O MET A 348 SHEET 4 AA1 4 MET A 334 ASN A 335 -1 N ASN A 335 O GLY A 338 SHEET 1 AA2 4 PHE B 247 ILE B 249 0 SHEET 2 AA2 4 GLY B 346 THR B 349 1 O PHE B 347 N ILE B 249 SHEET 3 AA2 4 GLY B 338 ILE B 341 -1 N VAL B 339 O MET B 348 SHEET 4 AA2 4 MET B 334 ASN B 335 -1 N ASN B 335 O GLY B 338 CISPEP 1 LYS A 358 PRO A 359 0 0.86 CISPEP 2 LYS A 474 ASP A 475 0 -2.09 CISPEP 3 LYS B 358 PRO B 359 0 1.46 CISPEP 4 LEU B 476 TYR B 477 0 5.64 SITE 1 AC1 14 PHE A 282 CYS A 285 SER A 289 HIS A 323 SITE 2 AC1 14 TYR A 327 LEU A 356 PHE A 360 PHE A 363 SITE 3 AC1 14 MET A 364 HIS A 449 LEU A 465 LEU A 469 SITE 4 AC1 14 TYR A 473 IMN A 502 SITE 1 AC2 9 GLU A 259 ARG A 280 ILE A 281 CYS A 285 SITE 2 AC2 9 ARG A 288 ILE A 341 SER A 342 MET A 348 SITE 3 AC2 9 IMN A 501 SITE 1 AC3 9 GLY B 284 CYS B 285 ARG B 288 SER B 289 SITE 2 AC3 9 ILE B 326 LEU B 330 LEU B 333 LEU B 340 SITE 3 AC3 9 ILE B 341 CRYST1 93.040 62.140 118.540 90.00 102.13 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010748 0.000000 0.002310 0.00000 SCALE2 0.000000 0.016093 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008629 0.00000