HEADER OXIDOREDUCTASE 28-JAN-15 4XVX TITLE CRYSTAL STRUCTURE OF AN ACYL-ACP DEHYDROGENASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACYL-[ACYL-CARRIER-PROTEIN] DEHYDROGENASE MBTN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ACYL-ACP DEHYDROGENASE MBTN,MYCOBACTIN SYNTHASE PROTEIN N; COMPND 5 EC: 1.3.99.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: ATCC 25618 / H37RV; SOURCE 5 GENE: MBTN, FADE14, RV1346, MTCY02B10.10; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPROEXHTB KEYWDS STRUCTURAL GENOMICS, TB STRUCTURAL GENOMICS CONSORTIUM, TBSGC, KEYWDS 2 ROSSMANN FOLD, ACYL-ACP BINDING, DEHYDROGENATION, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.CHAI,J.M.JOHNSTON,R.D.BUNKER,J.S.LOTT,E.N.BAKER,TB STRUCTURAL AUTHOR 2 GENOMICS CONSORTIUM (TBSGC) REVDAT 5 27-SEP-23 4XVX 1 HETSYN REVDAT 4 27-SEP-17 4XVX 1 SOURCE REMARK REVDAT 3 03-JUN-15 4XVX 1 JRNL REVDAT 2 08-APR-15 4XVX 1 JRNL REVDAT 1 11-FEB-15 4XVX 0 SPRSDE 11-FEB-15 4XVX 4M6Z JRNL AUTH A.F.CHAI,E.M.BULLOCH,G.L.EVANS,J.S.LOTT,E.N.BAKER, JRNL AUTH 2 J.M.JOHNSTON JRNL TITL A COVALENT ADDUCT OF MBTN, AN ACYL-ACP DEHYDROGENASE FROM JRNL TITL 2 MYCOBACTERIUM TUBERCULOSIS, REVEALS AN UNUSUAL ACYL-BINDING JRNL TITL 3 POCKET. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 71 862 2015 JRNL REFN ESSN 1399-0047 JRNL PMID 25849397 JRNL DOI 10.1107/S1399004715001650 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.5 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 42021 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2118 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.36 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.83 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3077 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2070 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2902 REMARK 3 BIN R VALUE (WORKING SET) : 0.2055 REMARK 3 BIN FREE R VALUE : 0.2322 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.69 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 175 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5595 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 145 REMARK 3 SOLVENT ATOMS : 203 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.86 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.01160 REMARK 3 B22 (A**2) : -6.01160 REMARK 3 B33 (A**2) : 12.02330 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.240 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5850 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7932 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2039 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 124 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 874 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5850 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : NULL ; NULL ; NULL REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : NULL ; NULL ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.07 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : NULL REMARK 3 OTHER TORSION ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XVX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000206390. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95369 REMARK 200 MONOCHROMATOR : SILICON DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42053 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 87.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.11800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.82100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP, PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1WS9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 23 % PEG 3350, 0.2 M DIAMMONIUM REMARK 280 HYDROGEN CITRATE, PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 69.55200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 40.15587 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 84.36433 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 69.55200 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 40.15587 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 84.36433 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 69.55200 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 40.15587 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 84.36433 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 69.55200 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 40.15587 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 84.36433 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 69.55200 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 40.15587 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 84.36433 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 69.55200 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 40.15587 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 84.36433 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 80.31173 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 168.72867 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 80.31173 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 168.72867 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 80.31173 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 168.72867 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 80.31173 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 168.72867 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 80.31173 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 168.72867 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 80.31173 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 168.72867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 26970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -147.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 69.55200 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 40.15587 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 84.36433 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 69.55200 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 40.15587 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 84.36433 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 ALA A -1 REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 THR A 2 REMARK 465 ALA A 3 REMARK 465 GLY A 4 REMARK 465 ASP A 171 REMARK 465 PRO A 172 REMARK 465 THR A 173 REMARK 465 SER A 174 REMARK 465 ARG A 175 REMARK 465 HIS A 176 REMARK 465 GLY A 382 REMARK 465 ALA A 383 REMARK 465 SER A 384 REMARK 465 LYS A 385 REMARK 465 ALA A 386 REMARK 465 GLY B -2 REMARK 465 ALA B -1 REMARK 465 MET B 0 REMARK 465 GLY B 1 REMARK 465 THR B 2 REMARK 465 ALA B 3 REMARK 465 GLY B 4 REMARK 465 THR B 173 REMARK 465 SER B 174 REMARK 465 ARG B 175 REMARK 465 HIS B 176 REMARK 465 GLY B 382 REMARK 465 ALA B 383 REMARK 465 SER B 384 REMARK 465 LYS B 385 REMARK 465 ALA B 386 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 54 -124.27 46.10 REMARK 500 ILE A 131 35.47 -92.82 REMARK 500 LEU A 154 -5.79 71.37 REMARK 500 ASP A 204 102.33 -58.67 REMARK 500 ASP A 211 79.16 -156.93 REMARK 500 ALA B 54 -125.11 46.70 REMARK 500 ILE B 131 35.70 -95.77 REMARK 500 PHE B 151 70.88 -112.22 REMARK 500 LEU B 154 -3.64 78.62 REMARK 500 PRO B 202 1.25 -68.84 REMARK 500 ASP B 211 84.11 -156.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues P33 A 401 and FDA A REMARK 800 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues P6G B 401 and FDA B REMARK 800 402 DBREF 4XVX A 2 386 UNP P9WQF9 MBTN_MYCTU 2 386 DBREF 4XVX B 2 386 UNP P9WQF9 MBTN_MYCTU 2 386 SEQADV 4XVX GLY A -2 UNP P9WQF9 EXPRESSION TAG SEQADV 4XVX ALA A -1 UNP P9WQF9 EXPRESSION TAG SEQADV 4XVX MET A 0 UNP P9WQF9 EXPRESSION TAG SEQADV 4XVX GLY A 1 UNP P9WQF9 EXPRESSION TAG SEQADV 4XVX GLY B -2 UNP P9WQF9 EXPRESSION TAG SEQADV 4XVX ALA B -1 UNP P9WQF9 EXPRESSION TAG SEQADV 4XVX MET B 0 UNP P9WQF9 EXPRESSION TAG SEQADV 4XVX GLY B 1 UNP P9WQF9 EXPRESSION TAG SEQRES 1 A 389 GLY ALA MET GLY THR ALA GLY SER ASP LEU ASP ASP PHE SEQRES 2 A 389 ARG GLY LEU LEU ALA LYS ALA PHE ASP GLU ARG VAL VAL SEQRES 3 A 389 ALA TRP THR ALA GLU ALA GLU ALA GLN GLU ARG PHE PRO SEQRES 4 A 389 ARG GLN LEU ILE GLU HIS LEU GLY VAL CYS GLY VAL PHE SEQRES 5 A 389 ASP ALA LYS TRP ALA THR ASP ALA ARG PRO ASP VAL GLY SEQRES 6 A 389 LYS LEU VAL GLU LEU ALA PHE ALA LEU GLY GLN LEU ALA SEQRES 7 A 389 SER ALA GLY ILE GLY VAL GLY VAL SER LEU HIS ASP SER SEQRES 8 A 389 ALA ILE ALA ILE LEU ARG ARG PHE GLY LYS SER ASP TYR SEQRES 9 A 389 LEU ARG ASP ILE CYS ASP GLN ALA ILE ARG GLY ALA ALA SEQRES 10 A 389 VAL LEU CYS ILE GLY ALA SER GLU GLU SER GLY GLY SER SEQRES 11 A 389 ASP LEU GLN ILE VAL GLU THR GLU ILE ARG SER ARG ASP SEQRES 12 A 389 GLY GLY PHE GLU VAL ARG GLY VAL LYS LYS PHE VAL SER SEQRES 13 A 389 LEU SER PRO ILE ALA ASP HIS ILE MET VAL VAL ALA ARG SEQRES 14 A 389 SER VAL ASP HIS ASP PRO THR SER ARG HIS GLY ASN VAL SEQRES 15 A 389 ALA VAL VAL ALA VAL PRO ALA ALA GLN VAL SER VAL GLN SEQRES 16 A 389 THR PRO TYR ARG LYS VAL GLY ALA GLY PRO LEU ASP THR SEQRES 17 A 389 ALA ALA VAL CYS ILE ASP THR TRP VAL PRO ALA ASP ALA SEQRES 18 A 389 LEU VAL ALA ARG ALA GLY THR GLY LEU ALA ALA ILE SER SEQRES 19 A 389 TRP GLY LEU ALA HIS GLU ARG MET SER ILE ALA GLY GLN SEQRES 20 A 389 ILE ALA ALA SER CYS GLN ARG ALA ILE GLY ILE THR LEU SEQRES 21 A 389 ALA ARG MET MET SER ARG ARG GLN PHE GLY GLN THR LEU SEQRES 22 A 389 PHE GLU HIS GLN ALA LEU ARG LEU ARG MET ALA ASP LEU SEQRES 23 A 389 GLN ALA ARG VAL ASP LEU LEU ARG TYR ALA LEU HIS GLY SEQRES 24 A 389 ILE ALA GLU GLN GLY ARG LEU GLU LEU ARG THR ALA ALA SEQRES 25 A 389 ALA VAL LYS VAL THR ALA ALA ARG LEU GLY GLU GLU VAL SEQRES 26 A 389 ILE SER GLU CYS MET HIS ILE PHE GLY GLY ALA GLY TYR SEQRES 27 A 389 LEU VAL ASP GLU THR THR LEU GLY LYS TRP TRP ARG ASP SEQRES 28 A 389 MET LYS LEU ALA ARG VAL GLY GLY GLY THR ASP GLU VAL SEQRES 29 A 389 LEU TRP GLU LEU VAL ALA ALA GLY MET THR PRO ASP HIS SEQRES 30 A 389 ASP GLY TYR ALA ALA VAL VAL GLY ALA SER LYS ALA SEQRES 1 B 389 GLY ALA MET GLY THR ALA GLY SER ASP LEU ASP ASP PHE SEQRES 2 B 389 ARG GLY LEU LEU ALA LYS ALA PHE ASP GLU ARG VAL VAL SEQRES 3 B 389 ALA TRP THR ALA GLU ALA GLU ALA GLN GLU ARG PHE PRO SEQRES 4 B 389 ARG GLN LEU ILE GLU HIS LEU GLY VAL CYS GLY VAL PHE SEQRES 5 B 389 ASP ALA LYS TRP ALA THR ASP ALA ARG PRO ASP VAL GLY SEQRES 6 B 389 LYS LEU VAL GLU LEU ALA PHE ALA LEU GLY GLN LEU ALA SEQRES 7 B 389 SER ALA GLY ILE GLY VAL GLY VAL SER LEU HIS ASP SER SEQRES 8 B 389 ALA ILE ALA ILE LEU ARG ARG PHE GLY LYS SER ASP TYR SEQRES 9 B 389 LEU ARG ASP ILE CYS ASP GLN ALA ILE ARG GLY ALA ALA SEQRES 10 B 389 VAL LEU CYS ILE GLY ALA SER GLU GLU SER GLY GLY SER SEQRES 11 B 389 ASP LEU GLN ILE VAL GLU THR GLU ILE ARG SER ARG ASP SEQRES 12 B 389 GLY GLY PHE GLU VAL ARG GLY VAL LYS LYS PHE VAL SER SEQRES 13 B 389 LEU SER PRO ILE ALA ASP HIS ILE MET VAL VAL ALA ARG SEQRES 14 B 389 SER VAL ASP HIS ASP PRO THR SER ARG HIS GLY ASN VAL SEQRES 15 B 389 ALA VAL VAL ALA VAL PRO ALA ALA GLN VAL SER VAL GLN SEQRES 16 B 389 THR PRO TYR ARG LYS VAL GLY ALA GLY PRO LEU ASP THR SEQRES 17 B 389 ALA ALA VAL CYS ILE ASP THR TRP VAL PRO ALA ASP ALA SEQRES 18 B 389 LEU VAL ALA ARG ALA GLY THR GLY LEU ALA ALA ILE SER SEQRES 19 B 389 TRP GLY LEU ALA HIS GLU ARG MET SER ILE ALA GLY GLN SEQRES 20 B 389 ILE ALA ALA SER CYS GLN ARG ALA ILE GLY ILE THR LEU SEQRES 21 B 389 ALA ARG MET MET SER ARG ARG GLN PHE GLY GLN THR LEU SEQRES 22 B 389 PHE GLU HIS GLN ALA LEU ARG LEU ARG MET ALA ASP LEU SEQRES 23 B 389 GLN ALA ARG VAL ASP LEU LEU ARG TYR ALA LEU HIS GLY SEQRES 24 B 389 ILE ALA GLU GLN GLY ARG LEU GLU LEU ARG THR ALA ALA SEQRES 25 B 389 ALA VAL LYS VAL THR ALA ALA ARG LEU GLY GLU GLU VAL SEQRES 26 B 389 ILE SER GLU CYS MET HIS ILE PHE GLY GLY ALA GLY TYR SEQRES 27 B 389 LEU VAL ASP GLU THR THR LEU GLY LYS TRP TRP ARG ASP SEQRES 28 B 389 MET LYS LEU ALA ARG VAL GLY GLY GLY THR ASP GLU VAL SEQRES 29 B 389 LEU TRP GLU LEU VAL ALA ALA GLY MET THR PRO ASP HIS SEQRES 30 B 389 ASP GLY TYR ALA ALA VAL VAL GLY ALA SER LYS ALA HET P33 A 401 21 HET FDA A 402 53 HET P6G B 401 18 HET FDA B 402 53 HETNAM P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL HETNAM FDA DIHYDROFLAVINE-ADENINE DINUCLEOTIDE HETNAM P6G HEXAETHYLENE GLYCOL HETSYN P33 HEPTAETHYLENE GLYCOL; PEG330 HETSYN P6G POLYETHYLENE GLYCOL PEG400 FORMUL 3 P33 C14 H30 O8 FORMUL 4 FDA 2(C27 H35 N9 O15 P2) FORMUL 5 P6G C12 H26 O7 FORMUL 7 HOH *203(H2 O) HELIX 1 AA1 SER A 5 PHE A 18 1 14 HELIX 2 AA2 ASP A 19 GLU A 33 1 15 HELIX 3 AA3 PRO A 36 CYS A 46 1 11 HELIX 4 AA4 GLY A 47 ALA A 54 1 8 HELIX 5 AA5 ASP A 60 LEU A 74 1 15 HELIX 6 AA6 SER A 76 GLY A 97 1 22 HELIX 7 AA7 SER A 99 ARG A 111 1 13 HELIX 8 AA8 ASP A 128 VAL A 132 5 5 HELIX 9 AA9 THR A 225 ARG A 263 1 39 HELIX 10 AB1 HIS A 273 GLN A 300 1 28 HELIX 11 AB2 GLU A 304 PHE A 330 1 27 HELIX 12 AB3 PHE A 330 TYR A 335 1 6 HELIX 13 AB4 THR A 341 LYS A 350 1 10 HELIX 14 AB5 LEU A 351 VAL A 354 5 4 HELIX 15 AB6 THR A 358 GLY A 369 1 12 HELIX 16 AB7 ASP A 373 VAL A 381 1 9 HELIX 17 AB8 ASP B 6 PHE B 18 1 13 HELIX 18 AB9 ASP B 19 GLU B 33 1 15 HELIX 19 AC1 PRO B 36 CYS B 46 1 11 HELIX 20 AC2 GLY B 47 ALA B 54 1 8 HELIX 21 AC3 ASP B 60 LEU B 74 1 15 HELIX 22 AC4 SER B 76 GLY B 97 1 22 HELIX 23 AC5 SER B 99 GLY B 112 1 14 HELIX 24 AC6 ASP B 128 VAL B 132 5 5 HELIX 25 AC7 THR B 225 ARG B 263 1 39 HELIX 26 AC8 HIS B 273 GLN B 300 1 28 HELIX 27 AC9 GLU B 304 PHE B 330 1 27 HELIX 28 AD1 PHE B 330 TYR B 335 1 6 HELIX 29 AD2 THR B 341 LYS B 350 1 10 HELIX 30 AD3 LEU B 351 VAL B 354 5 4 HELIX 31 AD4 THR B 358 GLY B 369 1 12 HELIX 32 AD5 ASP B 373 VAL B 381 1 9 SHEET 1 AA1 6 LEU A 116 GLY A 119 0 SHEET 2 AA1 6 HIS A 160 SER A 167 1 O MET A 162 N GLY A 119 SHEET 3 AA1 6 GLU A 135 ARG A 139 1 N ILE A 136 O ARG A 166 SHEET 4 AA1 6 GLY A 142 SER A 153 -1 O ARG A 146 N GLU A 135 SHEET 5 AA1 6 THR A 205 PRO A 215 -1 O ILE A 210 N GLY A 147 SHEET 6 AA1 6 VAL A 189 VAL A 191 -1 N SER A 190 O CYS A 209 SHEET 1 AA2 4 LEU A 116 GLY A 119 0 SHEET 2 AA2 4 HIS A 160 SER A 167 1 O MET A 162 N GLY A 119 SHEET 3 AA2 4 VAL A 179 PRO A 185 -1 O ALA A 180 N ALA A 165 SHEET 4 AA2 4 LEU A 219 ALA A 221 -1 O ALA A 221 N VAL A 181 SHEET 1 AA3 2 ARG A 264 GLN A 265 0 SHEET 2 AA3 2 GLN A 268 THR A 269 -1 O GLN A 268 N GLN A 265 SHEET 1 AA4 6 LEU B 116 GLY B 119 0 SHEET 2 AA4 6 HIS B 160 SER B 167 1 O MET B 162 N GLY B 119 SHEET 3 AA4 6 GLU B 135 ARG B 139 1 N ILE B 136 O ARG B 166 SHEET 4 AA4 6 GLY B 142 SER B 153 -1 O GLU B 144 N ARG B 137 SHEET 5 AA4 6 THR B 205 PRO B 215 -1 O ILE B 210 N GLY B 147 SHEET 6 AA4 6 VAL B 189 VAL B 191 -1 N SER B 190 O CYS B 209 SHEET 1 AA5 4 LEU B 116 GLY B 119 0 SHEET 2 AA5 4 HIS B 160 SER B 167 1 O MET B 162 N GLY B 119 SHEET 3 AA5 4 VAL B 179 PRO B 185 -1 O ALA B 180 N ALA B 165 SHEET 4 AA5 4 LEU B 219 ALA B 221 -1 O ALA B 221 N VAL B 181 SHEET 1 AA6 2 ARG B 264 GLN B 265 0 SHEET 2 AA6 2 GLN B 268 THR B 269 -1 O GLN B 268 N GLN B 265 LINK C2 P33 A 401 N5 FDA A 402 1555 1555 1.44 LINK C2 P6G B 401 N5 FDA B 402 1555 1555 1.47 SITE 1 AC1 32 ALA A 75 VAL A 81 ILE A 118 ALA A 120 SITE 2 AC1 32 SER A 121 GLY A 126 SER A 127 PHE A 151 SITE 3 AC1 32 SER A 153 SER A 248 TRP A 345 MET A 349 SITE 4 AC1 32 ALA A 352 VAL A 354 GLY A 355 GLY A 356 SITE 5 AC1 32 THR A 358 GLU A 360 HOH A 504 HOH A 553 SITE 6 AC1 32 HOH A 554 HOH A 574 ARG B 263 GLN B 265 SITE 7 AC1 32 PHE B 266 LEU B 270 HIS B 273 GLN B 274 SITE 8 AC1 32 LEU B 276 HIS B 328 ILE B 329 GLY B 332 SITE 1 AC2 33 ARG A 263 GLN A 265 PHE A 266 LEU A 270 SITE 2 AC2 33 HIS A 273 GLN A 274 LEU A 276 HIS A 328 SITE 3 AC2 33 ILE A 329 GLY A 332 ILE B 118 ALA B 120 SITE 4 AC2 33 SER B 121 GLY B 126 SER B 127 PHE B 151 SITE 5 AC2 33 SER B 153 ILE B 241 ILE B 245 SER B 248 SITE 6 AC2 33 TRP B 345 ALA B 352 VAL B 354 GLY B 355 SITE 7 AC2 33 GLY B 356 THR B 358 GLU B 360 HOH B 554 SITE 8 AC2 33 HOH B 557 HOH B 600 HOH B 601 HOH B 602 SITE 9 AC2 33 HOH B 612 CRYST1 139.104 139.104 253.093 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007189 0.004150 0.000000 0.00000 SCALE2 0.000000 0.008301 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003951 0.00000