HEADER DNA BINDING PROTEIN 06-FEB-15 4Y13 TITLE SDIA IN COMPLEX WITH OCTANOYL-RAC-GLYCEROL COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR OF FTSQAZ GENE CLUSTER; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI O157:H7; SOURCE 3 ORGANISM_TAXID: 83334; SOURCE 4 STRAIN: O157:H7; SOURCE 5 GENE: SDIA, ECS2654, Z3004; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS QUORUM SENSOR, DNA, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.X.NGUYEN,Y.NGUYEN,V.SPERANDIO,Y.JIANG REVDAT 3 04-DEC-19 4Y13 1 SOURCE REMARK REVDAT 2 15-APR-15 4Y13 1 JRNL REVDAT 1 08-APR-15 4Y13 0 JRNL AUTH Y.NGUYEN,N.X.NGUYEN,J.L.ROGERS,J.LIAO,J.B.MACMILLAN,Y.JIANG, JRNL AUTH 2 V.SPERANDIO JRNL TITL STRUCTURAL AND MECHANISTIC ROLES OF NOVEL CHEMICAL LIGANDS JRNL TITL 2 ON THE SDIA QUORUM-SENSING TRANSCRIPTION REGULATOR. JRNL REF MBIO V. 6 2015 JRNL REFN ESSN 2150-7511 JRNL PMID 25827420 JRNL DOI 10.1128/MBIO.02429-14 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.16 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 21605 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1077 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.1597 - 6.1865 1.00 2576 130 0.1711 0.2066 REMARK 3 2 6.1865 - 4.9123 1.00 2585 133 0.1887 0.2287 REMARK 3 3 4.9123 - 4.2919 1.00 2545 135 0.1699 0.2174 REMARK 3 4 4.2919 - 3.8997 1.00 2572 132 0.1954 0.2699 REMARK 3 5 3.8997 - 3.6203 1.00 2565 133 0.2150 0.2369 REMARK 3 6 3.6203 - 3.4070 1.00 2549 139 0.2429 0.2642 REMARK 3 7 3.4070 - 3.2364 1.00 2570 143 0.2785 0.3208 REMARK 3 8 3.2364 - 3.0955 1.00 2566 132 0.3317 0.3785 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2095 REMARK 3 ANGLE : 0.669 2831 REMARK 3 CHIRALITY : 0.028 299 REMARK 3 PLANARITY : 0.002 362 REMARK 3 DIHEDRAL : 12.906 788 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Y13 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000206636. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5-7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.083 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21605 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.095 REMARK 200 RESOLUTION RANGE LOW (A) : 45.155 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 28.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.13800 REMARK 200 FOR THE DATA SET : 1.3300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 29.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% (W/V) PEG 3350, 0.1M MES PH6.75, REMARK 280 0.1M AMMONIUM SULFATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.78667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 41.89333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 62.84000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.94667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 104.73333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 83.78667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 41.89333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 20.94667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 62.84000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 104.73333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -81.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 -64.92850 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 112.45946 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 104.73333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 245 REMARK 465 HIS A 246 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MSE A 1 CG SE CE REMARK 470 GLN A 2 CG CD OE1 NE2 REMARK 470 ASP A 3 CG OD1 OD2 REMARK 470 HIS A 244 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 3 111.62 -167.16 REMARK 500 ASP A 5 -33.76 -132.06 REMARK 500 GLU A 21 -27.01 -149.88 REMARK 500 TYR A 42 -167.91 -118.60 REMARK 500 SER A 43 139.70 -177.52 REMARK 500 ASN A 75 68.48 37.55 REMARK 500 ARG A 128 19.13 59.58 REMARK 500 HIS A 242 -145.97 61.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 480 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4Y15 RELATED DB: PDB REMARK 900 RELATED ID: 4Y17 RELATED DB: PDB DBREF 4Y13 A 1 240 UNP Q8XBD0 Q8XBD0_ECO57 1 240 SEQADV 4Y13 HIS A 241 UNP Q8XBD0 EXPRESSION TAG SEQADV 4Y13 HIS A 242 UNP Q8XBD0 EXPRESSION TAG SEQADV 4Y13 HIS A 243 UNP Q8XBD0 EXPRESSION TAG SEQADV 4Y13 HIS A 244 UNP Q8XBD0 EXPRESSION TAG SEQADV 4Y13 HIS A 245 UNP Q8XBD0 EXPRESSION TAG SEQADV 4Y13 HIS A 246 UNP Q8XBD0 EXPRESSION TAG SEQRES 1 A 246 MSE GLN ASP THR ASP PHE PHE SER TRP ARG ARG THR MSE SEQRES 2 A 246 LEU LEU ARG PHE GLN ARG MSE GLU THR ALA GLU GLU VAL SEQRES 3 A 246 TYR HIS GLU ILE GLU LEU GLN ALA GLN GLN LEU GLU TYR SEQRES 4 A 246 ASP TYR TYR SER LEU CYS VAL ARG HIS PRO VAL PRO PHE SEQRES 5 A 246 THR ARG PRO LYS VAL ALA PHE TYR THR ASN TYR PRO GLU SEQRES 6 A 246 ALA TRP VAL SER TYR TYR GLN ALA LYS ASN PHE LEU ALA SEQRES 7 A 246 ILE ASP PRO VAL LEU ASN PRO GLU ASN PHE SER GLN GLY SEQRES 8 A 246 HIS LEU MSE TRP ASN ASP ASP LEU PHE ASN GLU ALA GLN SEQRES 9 A 246 PRO LEU TRP GLU ALA ALA ARG ALA HIS GLY LEU ARG ARG SEQRES 10 A 246 GLY VAL THR GLN TYR LEU MSE LEU PRO ASN ARG ALA LEU SEQRES 11 A 246 GLY PHE LEU SER PHE SER ARG CYS SER ALA ARG GLU ILE SEQRES 12 A 246 PRO ILE LEU SER ASP GLU LEU GLN LEU LYS MSE GLN LEU SEQRES 13 A 246 LEU VAL ARG GLU SER LEU MSE ALA LEU MSE ARG LEU ASN SEQRES 14 A 246 ASP GLU ILE VAL MSE THR PRO GLU MSE ASN PHE SER LYS SEQRES 15 A 246 ARG GLU LYS GLU ILE LEU ARG TRP THR ALA GLU GLY LYS SEQRES 16 A 246 THR SER ALA GLU ILE ALA MSE ILE LEU SER ILE SER GLU SEQRES 17 A 246 ASN THR VAL ASN PHE HIS GLN LYS ASN MSE GLN LYS LYS SEQRES 18 A 246 ILE ASN ALA PRO ASN LYS THR GLN VAL ALA CYS TYR ALA SEQRES 19 A 246 ALA ALA THR GLY LEU ILE HIS HIS HIS HIS HIS HIS MODRES 4Y13 MSE A 1 MET MODIFIED RESIDUE MODRES 4Y13 MSE A 13 MET MODIFIED RESIDUE MODRES 4Y13 MSE A 20 MET MODIFIED RESIDUE MODRES 4Y13 MSE A 94 MET MODIFIED RESIDUE MODRES 4Y13 MSE A 124 MET MODIFIED RESIDUE MODRES 4Y13 MSE A 154 MET MODIFIED RESIDUE MODRES 4Y13 MSE A 163 MET MODIFIED RESIDUE MODRES 4Y13 MSE A 166 MET MODIFIED RESIDUE MODRES 4Y13 MSE A 174 MET MODIFIED RESIDUE MODRES 4Y13 MSE A 178 MET MODIFIED RESIDUE MODRES 4Y13 MSE A 202 MET MODIFIED RESIDUE MODRES 4Y13 MSE A 218 MET MODIFIED RESIDUE HET MSE A 1 6 HET MSE A 13 17 HET MSE A 20 17 HET MSE A 94 17 HET MSE A 124 17 HET MSE A 154 17 HET MSE A 163 17 HET MSE A 166 17 HET MSE A 174 17 HET MSE A 178 17 HET MSE A 202 17 HET MSE A 218 17 HET SO4 A 301 5 HET SO4 A 302 5 HET 480 A 303 15 HET GOL A 304 14 HET GOL A 305 14 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM 480 (2S)-2,3-DIHYDROXYPROPYL OCTANOATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 480 C11 H22 O4 FORMUL 5 GOL 2(C3 H8 O3) FORMUL 7 HOH *5(H2 O) HELIX 1 AA1 ASP A 5 ARG A 19 1 15 HELIX 2 AA2 THR A 22 LEU A 37 1 16 HELIX 3 AA3 PRO A 64 LYS A 74 1 11 HELIX 4 AA4 ASN A 75 PHE A 88 5 14 HELIX 5 AA5 ASN A 96 ASN A 101 5 6 HELIX 6 AA6 ALA A 103 HIS A 113 1 11 HELIX 7 AA7 LEU A 146 LEU A 168 1 23 HELIX 8 AA8 SER A 181 GLU A 193 1 13 HELIX 9 AA9 THR A 196 SER A 205 1 10 HELIX 10 AB1 SER A 207 ASN A 223 1 17 HELIX 11 AB2 ASN A 226 THR A 237 1 12 SHEET 1 AA1 5 VAL A 57 TYR A 60 0 SHEET 2 AA1 5 LEU A 44 ARG A 47 -1 N VAL A 46 O ALA A 58 SHEET 3 AA1 5 LEU A 130 ARG A 137 -1 O PHE A 132 N CYS A 45 SHEET 4 AA1 5 ARG A 117 MSE A 124 -1 N LEU A 123 O GLY A 131 SHEET 5 AA1 5 HIS A 92 MSE A 94 -1 N LEU A 93 O THR A 120 LINK C MSE A 1 N GLN A 2 1555 1555 1.33 LINK C THR A 12 N MSE A 13 1555 1555 1.33 LINK C MSE A 13 N LEU A 14 1555 1555 1.33 LINK C ARG A 19 N MSE A 20 1555 1555 1.33 LINK C MSE A 20 N GLU A 21 1555 1555 1.33 LINK C LEU A 93 N MSE A 94 1555 1555 1.33 LINK C MSE A 94 N TRP A 95 1555 1555 1.33 LINK C LEU A 123 N MSE A 124 1555 1555 1.33 LINK C MSE A 124 N LEU A 125 1555 1555 1.33 LINK C LYS A 153 N MSE A 154 1555 1555 1.33 LINK C MSE A 154 N GLN A 155 1555 1555 1.33 LINK C LEU A 162 N MSE A 163 1555 1555 1.33 LINK C MSE A 163 N ALA A 164 1555 1555 1.33 LINK C LEU A 165 N MSE A 166 1555 1555 1.33 LINK C MSE A 166 N ARG A 167 1555 1555 1.33 LINK C VAL A 173 N MSE A 174 1555 1555 1.33 LINK C MSE A 174 N THR A 175 1555 1555 1.33 LINK C GLU A 177 N MSE A 178 1555 1555 1.33 LINK C MSE A 178 N ASN A 179 1555 1555 1.33 LINK C ALA A 201 N MSE A 202 1555 1555 1.33 LINK C MSE A 202 N ILE A 203 1555 1555 1.33 LINK C ASN A 217 N MSE A 218 1555 1555 1.33 LINK C MSE A 218 N GLN A 219 1555 1555 1.33 CISPEP 1 VAL A 50 PRO A 51 0 0.03 SITE 1 AC1 4 ARG A 111 ARG A 116 ARG A 117 ALA A 140 SITE 1 AC2 4 LYS A 216 GLN A 219 ASN A 226 LYS A 227 SITE 1 AC3 13 SER A 43 CYS A 45 PHE A 59 TYR A 63 SITE 2 AC3 13 TYR A 71 ASP A 80 VAL A 82 TRP A 95 SITE 3 AC3 13 SER A 134 GOL A 304 GOL A 305 HOH A 402 SITE 4 AC3 13 HOH A 405 SITE 1 AC4 7 TRP A 95 TRP A 107 ALA A 110 ARG A 111 SITE 2 AC4 7 LEU A 115 ARG A 116 480 A 303 SITE 1 AC5 6 VAL A 57 TYR A 71 GLN A 72 LEU A 77 SITE 2 AC5 6 480 A 303 HOH A 404 CRYST1 129.857 129.857 125.680 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007701 0.004446 0.000000 0.00000 SCALE2 0.000000 0.008892 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007957 0.00000 HETATM 1 N MSE A 1 28.640 99.453 58.645 1.00121.77 N HETATM 2 CA MSE A 1 29.992 99.146 58.097 1.00149.12 C HETATM 3 C MSE A 1 29.918 98.817 56.606 1.00157.62 C HETATM 4 O MSE A 1 28.995 98.136 56.156 1.00139.41 O HETATM 5 CB MSE A 1 30.599 97.965 58.852 1.00 20.00 C HETATM 6 HA MSE A 1 30.561 99.922 58.217 1.00178.94 H