HEADER RNA 08-FEB-15 4Y1M TITLE AN ESCHERICHIA COLI YYBP-YKOY MN RIBOSWITCH IN THE MN2+-FREE STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: E. COLI YYBP-YKOY RIBOSWITCH; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 4 ORGANISM_TAXID: 562 KEYWDS RIBOSWITCH, MANGANESE, FREE STATE, RNA EXPDTA X-RAY DIFFRACTION AUTHOR I.R.PRICE,A.KE REVDAT 5 28-FEB-24 4Y1M 1 LINK REVDAT 4 25-DEC-19 4Y1M 1 REMARK REVDAT 3 20-SEP-17 4Y1M 1 REMARK REVDAT 2 20-JUL-16 4Y1M 1 REMARK REVDAT 1 08-APR-15 4Y1M 0 JRNL AUTH I.R.PRICE,A.GABALLA,F.DING,J.D.HELMANN,A.KE JRNL TITL MN(2+)-SENSING MECHANISMS OF YYBP-YKOY ORPHAN RIBOSWITCHES. JRNL REF MOL.CELL V. 57 1110 2015 JRNL REFN ISSN 1097-2765 JRNL PMID 25794619 JRNL DOI 10.1016/J.MOLCEL.2015.02.016 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1834) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 123.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 26818 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.380 REMARK 3 FREE R VALUE TEST SET COUNT : 1623 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4507 REMARK 3 ANGLE : 0.614 6927 REMARK 3 CHIRALITY : 0.067 915 REMARK 3 PLANARITY : 0.002 185 REMARK 3 DIHEDRAL : 17.050 2260 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 32.5983 2.9323 29.2014 REMARK 3 T TENSOR REMARK 3 T11: 0.6173 T22: 0.9284 REMARK 3 T33: 0.5960 T12: -0.0054 REMARK 3 T13: -0.1154 T23: 0.0239 REMARK 3 L TENSOR REMARK 3 L11: 2.1825 L22: 0.8111 REMARK 3 L33: 3.7202 L12: 0.0450 REMARK 3 L13: -1.2918 L23: 0.5984 REMARK 3 S TENSOR REMARK 3 S11: -0.1791 S12: -0.1282 S13: -0.3088 REMARK 3 S21: 0.0667 S22: 0.0788 S23: -0.1376 REMARK 3 S31: 0.3652 S32: 0.9194 S33: 0.1140 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Y1M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000206694. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.769, 0.7692, 0.9999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27410 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 123.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : 0.11600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.60 REMARK 200 R MERGE FOR SHELL (I) : 1.01000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.410 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 MM RNA IN 10 MM NACACODYLATE, 50 REMARK 280 MM NACL, 10 MM MGCL2 WITH A MOTHER LIQUOR OF 10% MPD, 40 MM NA REMARK 280 CACODYLATE PH 7, 80 MM SRCL2, 20 MM MGCL2, 12 MM SPERMINE TETRA- REMARK 280 HCL AT 21 C. NATIVE CRYSTALS WERE QUICKLY CRYO-PROTECTED IN REMARK 280 MOTHER LIQUOR PLUS 20% ETHYLENE GLYCOL PRIOR TO FLASH FREEZING REMARK 280 IN LIQUID N2., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 79.69200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 46.01020 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 92.36933 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 79.69200 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 46.01020 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 92.36933 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 79.69200 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 46.01020 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 92.36933 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 79.69200 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 46.01020 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 92.36933 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 79.69200 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 46.01020 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 92.36933 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 79.69200 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 46.01020 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 92.36933 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 92.02040 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 184.73867 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 92.02040 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 184.73867 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 92.02040 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 184.73867 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 92.02040 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 184.73867 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 92.02040 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 184.73867 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 92.02040 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 184.73867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 SR SR B 231 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 U A 22 REMARK 465 C A 23 REMARK 465 C A 24 REMARK 465 G A 25 REMARK 465 A A 26 REMARK 465 A A 27 REMARK 465 A A 28 REMARK 465 G A 29 REMARK 465 G A 30 REMARK 465 A A 31 REMARK 465 A A 32 REMARK 465 A A 33 REMARK 465 G A 74 REMARK 465 G A 75 REMARK 465 A A 76 REMARK 465 C A 77 REMARK 465 U A 78 REMARK 465 G A 79 REMARK 465 A A 80 REMARK 465 A A 81 REMARK 465 G A 82 REMARK 465 A A 83 REMARK 465 A A 84 REMARK 465 A A 85 REMARK 465 U A 86 REMARK 465 U A 87 REMARK 465 C A 88 REMARK 465 A A 89 REMARK 465 G A 90 REMARK 465 U A 91 REMARK 465 C A 92 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OP2 A A 45 N6 A A 47 2.02 REMARK 500 OP2 A B 45 O HOH B 301 2.06 REMARK 500 O2 U A 4 N6 A A 105 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 G A 97 O3' - P - OP2 ANGL. DEV. = -21.9 DEGREES REMARK 500 G A 97 O3' - P - OP1 ANGL. DEV. = -23.7 DEGREES REMARK 500 G A 97 OP1 - P - OP2 ANGL. DEV. = 10.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 360 DISTANCE = 8.12 ANGSTROMS REMARK 525 HOH B 361 DISTANCE = 8.22 ANGSTROMS REMARK 525 HOH B 362 DISTANCE = 8.46 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR B 201 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G B 9 OP1 REMARK 620 2 G B 10 OP2 101.3 REMARK 620 3 A B 11 OP1 94.5 85.3 REMARK 620 4 A B 45 OP1 154.5 101.5 76.2 REMARK 620 5 U B 49 OP1 87.2 79.9 165.1 108.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR B 205 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G B 9 O6 REMARK 620 2 HOH B 315 O 75.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR B 206 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G B 10 OP1 REMARK 620 2 C B 46 OP1 88.8 REMARK 620 3 U B 48 OP2 99.6 59.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR B 214 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G B 12 O6 REMARK 620 2 G B 97 OP2 111.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR B 202 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G B 25 O6 REMARK 620 2 HOH B 337 O 93.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR B 213 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A B 45 OP2 REMARK 620 2 C B 46 OP2 81.9 REMARK 620 3 HOH B 301 O 50.9 104.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR B 204 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G B 65 O6 REMARK 620 2 HOH B 311 O 71.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR B 223 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U B 106 O4 REMARK 620 2 HOH B 308 O 67.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR B 210 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 307 O REMARK 620 2 HOH B 335 O 120.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR B 218 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 323 O REMARK 620 2 HOH B 338 O 146.7 REMARK 620 3 HOH B 353 O 101.6 59.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR B 225 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 342 O REMARK 620 2 HOH B 343 O 122.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR B 243 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 339 O REMARK 620 2 HOH B 348 O 117.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR B 244 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 314 O REMARK 620 2 HOH B 351 O 59.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR A 209 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G A 9 OP1 REMARK 620 2 G A 10 OP2 88.8 REMARK 620 3 A A 11 OP1 110.6 88.5 REMARK 620 4 A A 45 OP1 159.5 107.2 83.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR A 219 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G A 12 O6 REMARK 620 2 G A 97 OP2 144.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR A 201 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U A 42 O4 REMARK 620 2 G A 65 O6 97.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR A 215 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A A 45 OP2 REMARK 620 2 C A 46 OP2 89.4 REMARK 620 3 A A 47 N7 111.1 75.6 REMARK 620 4 A A 47 N6 48.7 106.2 71.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GTP B 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 219 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 222 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 223 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 225 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 228 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 229 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 233 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 238 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 239 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 240 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 243 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 244 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR B 245 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 246 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GTP A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AG1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AG2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AG3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AG4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AG5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 217 REMARK 800 REMARK 800 SITE_IDENTIFIER: AG6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AG7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 219 REMARK 800 REMARK 800 SITE_IDENTIFIER: AG8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 220 REMARK 800 REMARK 800 SITE_IDENTIFIER: AG9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 221 REMARK 800 REMARK 800 SITE_IDENTIFIER: AH1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 222 REMARK 800 REMARK 800 SITE_IDENTIFIER: AH2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 225 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4Y1I RELATED DB: PDB REMARK 900 4Y1I CONTAIN THE SAME RIBOSWITCH FROM L. LACTIS IN THE PRESENCE OF REMARK 900 MN REMARK 900 RELATED ID: 4Y1J RELATED DB: PDB REMARK 900 4Y1J CONTAINS THE L. LACTIS BINDING SITE MUTANT VERSION OF THIS REMARK 900 RIBOSWITCH DBREF 4Y1M B 2 108 PDB 4Y1M 4Y1M 2 108 DBREF 4Y1M A 2 108 PDB 4Y1M 4Y1M 2 108 SEQRES 1 B 107 G A U U U G G G G A G U A SEQRES 2 B 107 G C C G A U U U C C G A A SEQRES 3 B 107 A G G A A A U G U A C G U SEQRES 4 B 107 G U C A A C A U U U U C G SEQRES 5 B 107 U U G A A A A A C G U G G SEQRES 6 B 107 C A C G U A C G G A C U G SEQRES 7 B 107 A A G A A A U U C A G U C SEQRES 8 B 107 A G G C G A G A C C A U A SEQRES 9 B 107 U C C SEQRES 1 A 107 G A U U U G G G G A G U A SEQRES 2 A 107 G C C G A U U U C C G A A SEQRES 3 A 107 A G G A A A U G U A C G U SEQRES 4 A 107 G U C A A C A U U U U C G SEQRES 5 A 107 U U G A A A A A C G U G G SEQRES 6 A 107 C A C G U A C G G A C U G SEQRES 7 A 107 A A G A A A U U C A G U C SEQRES 8 A 107 A G G C G A G A C C A U A SEQRES 9 A 107 U C C HET SR B 201 1 HET SR B 202 1 HET SR B 203 1 HET SR B 204 1 HET SR B 205 1 HET SR B 206 1 HET SR B 207 1 HET SR B 208 1 HET SR B 209 1 HET SR B 210 1 HET MG B 211 1 HET GTP B 212 32 HET SR B 213 1 HET SR B 214 1 HET SR B 215 1 HET SR B 216 1 HET SR B 217 1 HET SR B 218 1 HET SR B 219 1 HET SR B 220 1 HET SR B 221 1 HET SR B 222 1 HET SR B 223 1 HET SR B 224 1 HET SR B 225 1 HET SR B 226 1 HET SR B 227 1 HET SR B 228 1 HET SR B 229 1 HET SR B 230 1 HET SR B 231 1 HET SR B 232 1 HET SR B 233 1 HET SR B 234 1 HET SR B 235 1 HET SR B 236 1 HET SR B 237 1 HET SR B 238 1 HET SR B 239 1 HET SR B 240 1 HET SR B 241 1 HET SR B 242 1 HET SR B 243 1 HET SR B 244 1 HET SR B 245 1 HET MG B 246 1 HET MG B 247 1 HET MG B 248 1 HET MG B 249 1 HET SR A 201 1 HET SR A 202 1 HET SR A 203 1 HET SR A 204 1 HET SR A 205 1 HET SR A 206 1 HET SR A 207 1 HET GTP A 208 32 HET SR A 209 1 HET SR A 210 1 HET SR A 211 1 HET SR A 212 1 HET SR A 213 1 HET SR A 214 1 HET SR A 215 1 HET SR A 216 1 HET SR A 217 1 HET SR A 218 1 HET SR A 219 1 HET SR A 220 1 HET SR A 221 1 HET SR A 222 1 HET SR A 223 1 HET MG A 224 1 HET MG A 225 1 HET MG A 226 1 HET MG A 227 1 HETNAM SR STRONTIUM ION HETNAM MG MAGNESIUM ION HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE FORMUL 3 SR 65(SR 2+) FORMUL 13 MG 9(MG 2+) FORMUL 14 GTP 2(C10 H16 N5 O14 P3) FORMUL 79 HOH *72(H2 O) LINK OP1 G B 9 SR L SR B 201 1555 1555 2.41 LINK O6 G B 9 SR SR B 205 1555 1555 2.40 LINK OP2 G B 10 SR L SR B 201 1555 1555 2.44 LINK OP1 G B 10 SR SR B 206 1555 1555 2.41 LINK OP1 A B 11 SR L SR B 201 1555 1555 2.46 LINK O6 G B 12 SR SR B 214 1555 1555 2.40 LINK N2 G B 18 SR SR B 245 1555 1555 2.50 LINK O6 G B 25 SR SR B 202 1555 1555 2.41 LINK O4 U B 34 SR SR B 203 1555 1555 2.40 LINK OP1 A B 45 SR L SR B 201 1555 1555 2.44 LINK OP2 A B 45 SR SR B 213 1555 1555 2.40 LINK OP1 C B 46 SR SR B 206 1555 1555 2.42 LINK OP2 C B 46 SR SR B 213 1555 1555 2.41 LINK O2 C B 46 SR SR B 219 1555 1555 2.41 LINK OP2 U B 48 SR SR B 206 1555 1555 2.40 LINK OP1 U B 49 SR L SR B 201 1555 1555 2.44 LINK O4 U B 51 SR SR B 215 1555 1555 2.41 LINK O6 G B 56 SR SR B 216 1555 1555 2.53 LINK O6 G B 65 SR SR B 204 1555 1555 2.40 LINK OP2 G B 97 SR SR B 214 1555 1555 2.41 LINK O4 U B 106 SR SR B 223 1555 1555 2.40 LINK SR SR B 202 O HOH B 337 1555 1555 2.99 LINK SR SR B 204 O HOH B 311 1555 1555 2.41 LINK SR SR B 205 O HOH B 315 1555 1555 2.40 LINK SR L SR B 210 O HOH B 307 1555 1555 2.40 LINK SR L SR B 210 O HOH B 335 1555 1555 2.40 LINK MG MG B 211 O HOH B 325 1555 1555 2.07 LINK SR SR B 213 O HOH B 301 1555 1555 2.40 LINK SR SR B 218 O HOH B 323 1555 1555 2.40 LINK SR SR B 218 O HOH B 338 1555 1555 2.41 LINK SR SR B 218 O HOH B 353 1555 1555 2.40 LINK SR SR B 222 O HOH B 349 1555 1555 2.40 LINK SR SR B 223 O HOH B 308 1555 1555 2.40 LINK SR SR B 225 O HOH B 342 1555 1555 2.40 LINK SR SR B 225 O HOH B 343 1555 1555 2.40 LINK SR SR B 239 O HOH B 350 1555 1555 2.40 LINK SR SR B 240 O HOH A 305 1555 1555 2.40 LINK SR SR B 243 O HOH B 339 1555 1555 2.40 LINK SR SR B 243 O HOH B 348 1555 1555 2.40 LINK SR SR B 244 O HOH B 314 1555 1555 2.40 LINK SR SR B 244 O HOH B 351 1555 1555 2.40 LINK OP1 G A 9 SR SR A 209 1555 1555 2.43 LINK O6 G A 9 SR SR A 214 1555 1555 2.40 LINK OP2 G A 10 SR SR A 209 1555 1555 2.42 LINK OP1 A A 11 SR SR A 209 1555 1555 2.42 LINK O6 G A 12 SR SR A 219 1555 1555 2.40 LINK O4 U A 42 SR SR A 201 1555 1555 2.42 LINK OP2 A A 44 SR SR A 212 1555 1555 2.40 LINK OP1 A A 45 SR SR A 209 1555 1555 2.43 LINK OP2 A A 45 SR SR A 215 1555 1555 2.39 LINK OP2 C A 46 SR SR A 215 1555 1555 2.46 LINK OP1 C A 46 SR SR A 221 1555 1555 2.40 LINK O2 C A 46 SR SR A 222 1555 1555 2.40 LINK N7 A A 47 SR SR A 215 1555 1555 2.71 LINK N6 A A 47 SR SR A 215 1555 1555 2.51 LINK O6 G A 56 SR SR A 203 1555 1555 2.40 LINK N7 G A 56 SR SR A 217 1555 1555 2.50 LINK OP2 U A 64 MG MG A 225 1555 1555 2.16 LINK O6 G A 65 SR SR A 201 1555 1555 2.41 LINK OP2 G A 97 SR SR A 219 1555 1555 2.40 LINK SR SR A 218 O HOH A 301 1555 1555 2.40 SITE 1 AC1 5 G B 9 G B 10 A B 11 A B 45 SITE 2 AC1 5 U B 49 SITE 1 AC2 2 G B 25 HOH B 337 SITE 1 AC3 2 U B 34 HOH B 345 SITE 1 AC4 3 U B 42 G B 65 HOH B 311 SITE 1 AC5 2 G B 9 HOH B 315 SITE 1 AC6 3 G B 10 C B 46 U B 48 SITE 1 AC7 1 G B 94 SITE 1 AC8 2 HOH B 307 HOH B 335 SITE 1 AC9 3 A B 76 C B 77 HOH B 325 SITE 1 AD1 5 C A 108 GTP A 208 G B 2 A B 26 SITE 2 AD1 5 C B 108 SITE 1 AD2 3 A B 45 C B 46 HOH B 301 SITE 1 AD3 2 G B 12 G B 97 SITE 1 AD4 1 U B 51 SITE 1 AD5 1 G B 56 SITE 1 AD6 3 HOH B 323 HOH B 338 HOH B 353 SITE 1 AD7 1 C B 46 SITE 1 AD8 1 HOH B 349 SITE 1 AD9 2 U B 106 HOH B 308 SITE 1 AE1 2 HOH B 342 HOH B 343 SITE 1 AE2 1 G B 74 SITE 1 AE3 1 G B 65 SITE 1 AE4 1 A B 57 SITE 1 AE5 1 HOH B 355 SITE 1 AE6 1 HOH B 350 SITE 1 AE7 1 HOH A 305 SITE 1 AE8 2 HOH B 339 HOH B 348 SITE 1 AE9 4 G B 82 HOH B 314 HOH B 319 HOH B 351 SITE 1 AF1 1 G B 18 SITE 1 AF2 1 C B 107 SITE 1 AF3 2 U A 42 G A 65 SITE 1 AF4 2 G A 56 HOH A 308 SITE 1 AF5 1 U A 104 SITE 1 AF6 2 A A 93 G A 94 SITE 1 AF7 1 A A 44 SITE 1 AF8 5 G A 2 C A 108 C B 108 GTP B 212 SITE 2 AF8 5 HOH B 360 SITE 1 AF9 4 G A 9 G A 10 A A 11 A A 45 SITE 1 AG1 1 A A 44 SITE 1 AG2 1 G A 9 SITE 1 AG3 3 A A 45 C A 46 A A 47 SITE 1 AG4 1 U A 4 SITE 1 AG5 1 G A 56 SITE 1 AG6 3 U A 71 HOH A 301 HOH A 309 SITE 1 AG7 2 G A 12 G A 97 SITE 1 AG8 1 U A 51 SITE 1 AG9 1 C A 46 SITE 1 AH1 1 C A 46 SITE 1 AH2 1 U A 64 CRYST1 159.384 159.384 277.108 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006274 0.003622 0.000000 0.00000 SCALE2 0.000000 0.007245 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003609 0.00000