HEADER IMMUNE SYSTEM 09-FEB-15 4Y1T TITLE STRUCTURAL BASIS FOR CA2+-MEDIATED INTERACTION OF THE PERFORIN C2 TITLE 2 DOMAIN WITH LIPID MEMBRANES COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERFORIN-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C2 DOMAIN (UNP RESIDUES 410-535); COMPND 5 SYNONYM: P1,CYTOLYSIN,LYMPHOCYTE PORE-FORMING PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: PRF1, PFP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: TOP10F`; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PCOMB3X KEYWDS PERFORIN, C2 DOMAIN, CALCIUM BINDING, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR P.J.CONROY,H.YAGI,J.C.WHISSTOCK,R.S.NORTON REVDAT 4 27-SEP-23 4Y1T 1 JRNL REMARK LINK REVDAT 3 28-OCT-15 4Y1T 1 JRNL REVDAT 2 09-SEP-15 4Y1T 1 JRNL REVDAT 1 02-SEP-15 4Y1T 0 JRNL AUTH H.YAGI,P.J.CONROY,E.W.LEUNG,R.H.LAW,J.A.TRAPANI, JRNL AUTH 2 I.VOSKOBOINIK,J.C.WHISSTOCK,R.S.NORTON JRNL TITL STRUCTURAL BASIS FOR CA2+-MEDIATED INTERACTION OF THE JRNL TITL 2 PERFORIN C2 DOMAIN WITH LIPID MEMBRANES. JRNL REF J.BIOL.CHEM. V. 290 25213 2015 JRNL REFN ESSN 1083-351X JRNL PMID 26306037 JRNL DOI 10.1074/JBC.M115.668384 REMARK 2 REMARK 2 RESOLUTION. 2.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 5114 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.340 REMARK 3 FREE R VALUE TEST SET COUNT : 273 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.3882 - 3.3584 1.00 2508 118 0.1656 0.2054 REMARK 3 2 3.3584 - 2.6657 0.99 2333 155 0.1738 0.2274 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 991 REMARK 3 ANGLE : 0.648 1345 REMARK 3 CHIRALITY : 0.025 145 REMARK 3 PLANARITY : 0.003 179 REMARK 3 DIHEDRAL : 10.161 339 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Y1T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000206706. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.953697 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5115 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.666 REMARK 200 RESOLUTION RANGE LOW (A) : 42.388 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.2500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.81 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.18200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3NSJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES SODIUM PH 7.5, 0.2 M REMARK 280 CALCIUM CHLORIDE DIHYDRATE AND 14% V/V POLYETHYLENE GLYCOL 400, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 22.50450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 29.91400 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 62.95950 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 22.50450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 29.91400 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 62.95950 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 22.50450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 29.91400 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 62.95950 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 22.50450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 29.91400 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 62.95950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 708 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 721 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 536 REMARK 465 GLN A 537 REMARK 465 ALA A 538 REMARK 465 GLY A 539 REMARK 465 GLN A 540 REMARK 465 HIS A 541 REMARK 465 HIS A 542 REMARK 465 HIS A 543 REMARK 465 HIS A 544 REMARK 465 HIS A 545 REMARK 465 HIS A 546 REMARK 465 GLY A 547 REMARK 465 ALA A 548 REMARK 465 TYR A 549 REMARK 465 PRO A 550 REMARK 465 TYR A 551 REMARK 465 ASP A 552 REMARK 465 VAL A 553 REMARK 465 PRO A 554 REMARK 465 ASP A 555 REMARK 465 TYR A 556 REMARK 465 ALA A 557 REMARK 465 SER A 558 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 411 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 515 CZ NH1 NH2 REMARK 470 HIS A 527 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 435 76.02 -113.27 REMARK 500 GLU A 467 -146.52 59.58 REMARK 500 ALA A 488 -101.92 62.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 604 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 428 O REMARK 620 2 ASP A 429 OD1 77.4 REMARK 620 3 ASP A 483 OD2 86.2 76.6 REMARK 620 4 ASP A 485 OD1 148.6 74.3 74.1 REMARK 620 5 ASP A 485 OD2 160.2 122.3 99.3 50.2 REMARK 620 6 ASP A 491 OD2 86.8 159.7 89.9 116.8 74.3 REMARK 620 7 HOH A 723 O 104.1 77.1 148.8 82.8 80.9 119.6 REMARK 620 8 HOH A 752 O 73.9 110.8 156.1 129.4 95.5 76.2 52.3 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 429 OD1 REMARK 620 2 ASP A 429 OD2 52.2 REMARK 620 3 ASP A 435 OD2 119.7 67.7 REMARK 620 4 ASP A 483 OD1 90.8 94.9 90.0 REMARK 620 5 ASP A 483 OD2 73.3 115.2 139.0 49.5 REMARK 620 6 ALA A 484 O 161.0 144.4 78.3 95.4 97.2 REMARK 620 7 ASP A 485 OD1 74.7 115.8 146.3 121.7 72.4 86.9 REMARK 620 8 HOH A 705 O 94.1 76.6 74.8 164.5 146.0 84.8 73.8 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 603 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 429 OD2 REMARK 620 2 THR A 432 OG1 78.9 REMARK 620 3 ALA A 433 O 88.1 92.5 REMARK 620 4 ASP A 435 OD1 113.5 167.5 87.0 REMARK 620 5 ASP A 435 OD2 70.2 139.7 111.3 51.0 REMARK 620 6 ASN A 454 OD1 164.3 87.7 84.3 79.8 125.4 REMARK 620 7 GLU A 467 OE2 92.6 171.2 85.0 21.0 35.9 100.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 485 OD2 REMARK 620 2 ASP A 489 O 90.3 REMARK 620 3 ASP A 491 OD1 93.2 97.7 REMARK 620 4 HOH A 707 O 81.3 85.5 173.7 REMARK 620 5 HOH A 718 O 77.0 166.4 87.8 87.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 605 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 488 O REMARK 620 2 ASP A 490 OD1 71.4 REMARK 620 3 HOH A 714 O 148.7 83.3 REMARK 620 4 HOH A 761 O 146.0 92.3 50.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 605 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4Y1S RELATED DB: PDB DBREF 4Y1T A 410 535 UNP P10820 PERF_MOUSE 410 535 SEQADV 4Y1T ALA A 427 UNP P10820 TRP 427 ENGINEERED MUTATION SEQADV 4Y1T ALA A 430 UNP P10820 TYR 430 ENGINEERED MUTATION SEQADV 4Y1T ALA A 486 UNP P10820 TYR 486 ENGINEERED MUTATION SEQADV 4Y1T ALA A 488 UNP P10820 TRP 488 ENGINEERED MUTATION SEQADV 4Y1T GLY A 536 UNP P10820 EXPRESSION TAG SEQADV 4Y1T GLN A 537 UNP P10820 EXPRESSION TAG SEQADV 4Y1T ALA A 538 UNP P10820 EXPRESSION TAG SEQADV 4Y1T GLY A 539 UNP P10820 EXPRESSION TAG SEQADV 4Y1T GLN A 540 UNP P10820 EXPRESSION TAG SEQADV 4Y1T HIS A 541 UNP P10820 EXPRESSION TAG SEQADV 4Y1T HIS A 542 UNP P10820 EXPRESSION TAG SEQADV 4Y1T HIS A 543 UNP P10820 EXPRESSION TAG SEQADV 4Y1T HIS A 544 UNP P10820 EXPRESSION TAG SEQADV 4Y1T HIS A 545 UNP P10820 EXPRESSION TAG SEQADV 4Y1T HIS A 546 UNP P10820 EXPRESSION TAG SEQADV 4Y1T GLY A 547 UNP P10820 EXPRESSION TAG SEQADV 4Y1T ALA A 548 UNP P10820 EXPRESSION TAG SEQADV 4Y1T TYR A 549 UNP P10820 EXPRESSION TAG SEQADV 4Y1T PRO A 550 UNP P10820 EXPRESSION TAG SEQADV 4Y1T TYR A 551 UNP P10820 EXPRESSION TAG SEQADV 4Y1T ASP A 552 UNP P10820 EXPRESSION TAG SEQADV 4Y1T VAL A 553 UNP P10820 EXPRESSION TAG SEQADV 4Y1T PRO A 554 UNP P10820 EXPRESSION TAG SEQADV 4Y1T ASP A 555 UNP P10820 EXPRESSION TAG SEQADV 4Y1T TYR A 556 UNP P10820 EXPRESSION TAG SEQADV 4Y1T ALA A 557 UNP P10820 EXPRESSION TAG SEQADV 4Y1T SER A 558 UNP P10820 EXPRESSION TAG SEQRES 1 A 149 GLN ARG GLY LEU ALA HIS LEU VAL VAL SER ASN PHE ARG SEQRES 2 A 149 ALA GLU HIS LEU ALA GLY ASP ALA THR THR ALA THR ASP SEQRES 3 A 149 ALA TYR LEU LYS VAL PHE PHE GLY GLY GLN GLU PHE ARG SEQRES 4 A 149 THR GLY VAL VAL TRP ASN ASN ASN ASN PRO ARG TRP THR SEQRES 5 A 149 ASP LYS MET ASP PHE GLU ASN VAL LEU LEU SER THR GLY SEQRES 6 A 149 GLY PRO LEU ARG VAL GLN VAL TRP ASP ALA ASP ALA GLY SEQRES 7 A 149 ALA ASP ASP ASP LEU LEU GLY SER CYS ASP ARG SER PRO SEQRES 8 A 149 HIS SER GLY PHE HIS GLU VAL THR CYS GLU LEU ASN HIS SEQRES 9 A 149 GLY ARG VAL LYS PHE SER TYR HIS ALA LYS CYS LEU PRO SEQRES 10 A 149 HIS LEU THR GLY GLY THR CYS LEU GLU GLY GLN ALA GLY SEQRES 11 A 149 GLN HIS HIS HIS HIS HIS HIS GLY ALA TYR PRO TYR ASP SEQRES 12 A 149 VAL PRO ASP TYR ALA SER HET CA A 601 1 HET CA A 602 1 HET CA A 603 1 HET CA A 604 1 HET CA A 605 1 HETNAM CA CALCIUM ION FORMUL 2 CA 5(CA 2+) FORMUL 7 HOH *63(H2 O) SHEET 1 AA1 3 ARG A 459 TRP A 460 0 SHEET 2 AA1 3 LEU A 413 GLU A 424 -1 N PHE A 421 O TRP A 460 SHEET 3 AA1 3 MET A 464 LEU A 470 -1 O MET A 464 N VAL A 418 SHEET 1 AA2 4 ARG A 459 TRP A 460 0 SHEET 2 AA2 4 LEU A 413 GLU A 424 -1 N PHE A 421 O TRP A 460 SHEET 3 AA2 4 ARG A 515 CYS A 524 -1 O LYS A 517 N ARG A 422 SHEET 4 AA2 4 GLY A 503 GLU A 510 -1 N VAL A 507 O PHE A 518 SHEET 1 AA3 4 GLN A 445 ARG A 448 0 SHEET 2 AA3 4 ALA A 436 PHE A 442 -1 N PHE A 442 O GLN A 445 SHEET 3 AA3 4 LEU A 477 ASP A 483 -1 O ARG A 478 N PHE A 441 SHEET 4 AA3 4 ASP A 491 ARG A 498 -1 O ARG A 498 N LEU A 477 SSBOND 1 CYS A 496 CYS A 509 1555 1555 2.03 SSBOND 2 CYS A 524 CYS A 533 1555 1555 2.03 LINK O GLY A 428 CA CA A 604 1555 1555 2.41 LINK OD1 ASP A 429 CA CA A 601 1555 1555 2.42 LINK OD2 ASP A 429 CA CA A 601 1555 1555 2.56 LINK OD2 ASP A 429 CA CA A 603 1555 1555 2.41 LINK OD1 ASP A 429 CA CA A 604 1555 1555 2.39 LINK OG1 THR A 432 CA CA A 603 1555 1555 2.52 LINK O ALA A 433 CA CA A 603 1555 1555 2.37 LINK OD2 ASP A 435 CA CA A 601 1555 1555 2.55 LINK OD1 ASP A 435 CA CA A 603 1555 1555 2.57 LINK OD2 ASP A 435 CA CA A 603 1555 1555 2.53 LINK OD1 ASN A 454 CA CA A 603 1555 1555 2.41 LINK OE2 GLU A 467 CA CA A 603 1555 7444 2.38 LINK OD1 ASP A 483 CA CA A 601 1555 1555 2.64 LINK OD2 ASP A 483 CA CA A 601 1555 1555 2.61 LINK OD2 ASP A 483 CA CA A 604 1555 1555 2.46 LINK O ALA A 484 CA CA A 601 1555 1555 2.61 LINK OD1 ASP A 485 CA CA A 601 1555 1555 2.51 LINK OD2 ASP A 485 CA CA A 602 1555 1555 2.35 LINK OD1 ASP A 485 CA CA A 604 1555 1555 2.56 LINK OD2 ASP A 485 CA CA A 604 1555 1555 2.61 LINK O ALA A 488 CA CA A 605 1555 1555 2.42 LINK O ASP A 489 CA CA A 602 1555 1555 2.88 LINK OD1 ASP A 490 CA CA A 605 1555 1555 2.75 LINK OD1 ASP A 491 CA CA A 602 1555 1555 2.41 LINK OD2 ASP A 491 CA CA A 604 1555 1555 2.35 LINK CA CA A 601 O HOH A 705 1555 7454 2.46 LINK CA CA A 602 O HOH A 707 1555 7454 2.48 LINK CA CA A 602 O HOH A 718 1555 1555 2.45 LINK CA CA A 604 O HOH A 723 1555 1555 2.72 LINK CA CA A 604 O HOH A 752 1555 1555 2.46 LINK CA CA A 605 O HOH A 714 1555 1555 2.99 LINK CA CA A 605 O HOH A 761 1555 1555 2.47 SITE 1 AC1 7 ASP A 429 ASP A 435 ASP A 483 ALA A 484 SITE 2 AC1 7 ASP A 485 CA A 604 HOH A 705 SITE 1 AC2 5 ASP A 485 ASP A 489 ASP A 491 HOH A 707 SITE 2 AC2 5 HOH A 718 SITE 1 AC3 6 ASP A 429 THR A 432 ALA A 433 ASP A 435 SITE 2 AC3 6 ASN A 454 GLU A 467 SITE 1 AC4 8 GLY A 428 ASP A 429 ASP A 483 ASP A 485 SITE 2 AC4 8 ASP A 491 CA A 601 HOH A 723 HOH A 752 SITE 1 AC5 5 ASP A 485 ALA A 488 ASP A 490 HOH A 714 SITE 2 AC5 5 HOH A 761 CRYST1 45.009 59.828 125.919 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022218 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016715 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007942 0.00000