HEADER HYDROLASE 10-FEB-15 4Y38 TITLE ENDOTHIAPEPSIN IN COMPLEX WITH FRAGMENT B29 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOTHIAPEPSIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ASPARTATE PROTEASE; COMPND 5 EC: 3.4.23.22 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPHONECTRIA PARASITICA; SOURCE 3 ORGANISM_COMMON: CHESNUT BLIGHT FUNGUS; SOURCE 4 ORGANISM_TAXID: 5116 KEYWDS FRAGMENT SCREENING, ASPARTIC PROTEASE INHIBITION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.U.HUSCHMANN,J.LINNIK,M.S.WEISS,U.MUELLER REVDAT 4 10-JAN-24 4Y38 1 REMARK REVDAT 3 11-MAY-16 4Y38 1 JRNL REVDAT 2 04-MAY-16 4Y38 1 JRNL REVDAT 1 02-MAR-16 4Y38 0 JRNL AUTH F.U.HUSCHMANN,J.LINNIK,K.SPARTA,M.UHLEIN,X.WANG,A.METZ, JRNL AUTH 2 J.SCHIEBEL,A.HEINE,G.KLEBE,M.S.WEISS,U.MUELLER JRNL TITL STRUCTURES OF ENDOTHIAPEPSIN-FRAGMENT COMPLEXES FROM JRNL TITL 2 CRYSTALLOGRAPHIC FRAGMENT SCREENING USING A NOVEL, DIVERSE JRNL TITL 3 AND AFFORDABLE 96-COMPOUND FRAGMENT LIBRARY. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 72 346 2016 JRNL REFN ESSN 2053-230X JRNL PMID 27139825 JRNL DOI 10.1107/S2053230X16004623 REMARK 2 REMARK 2 RESOLUTION. 1.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 125102 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.115 REMARK 3 R VALUE (WORKING SET) : 0.115 REMARK 3 FREE R VALUE : 0.130 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6255 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.6990 - 3.4160 0.99 4161 218 0.1501 0.1463 REMARK 3 2 3.4160 - 2.7115 1.00 4107 217 0.1086 0.1212 REMARK 3 3 2.7115 - 2.3688 1.00 4083 215 0.0992 0.1022 REMARK 3 4 2.3688 - 2.1522 1.00 4101 215 0.0892 0.0980 REMARK 3 5 2.1522 - 1.9980 0.99 4073 215 0.0827 0.1032 REMARK 3 6 1.9980 - 1.8802 0.99 4075 214 0.0840 0.1022 REMARK 3 7 1.8802 - 1.7860 0.99 4051 213 0.0843 0.1067 REMARK 3 8 1.7860 - 1.7083 0.99 4053 214 0.0879 0.1046 REMARK 3 9 1.7083 - 1.6425 0.99 4039 212 0.0867 0.1107 REMARK 3 10 1.6425 - 1.5858 0.99 4027 212 0.0851 0.1060 REMARK 3 11 1.5858 - 1.5362 0.98 4003 211 0.0873 0.1063 REMARK 3 12 1.5362 - 1.4923 0.98 3972 209 0.0929 0.1160 REMARK 3 13 1.4923 - 1.4530 0.98 3996 210 0.0928 0.1289 REMARK 3 14 1.4530 - 1.4176 0.98 4010 211 0.1020 0.1303 REMARK 3 15 1.4176 - 1.3853 0.98 3971 209 0.1034 0.1415 REMARK 3 16 1.3853 - 1.3559 0.97 3980 210 0.1118 0.1293 REMARK 3 17 1.3559 - 1.3287 0.97 3979 209 0.1199 0.1224 REMARK 3 18 1.3287 - 1.3037 0.97 3960 209 0.1243 0.1658 REMARK 3 19 1.3037 - 1.2804 0.97 3943 207 0.1298 0.1639 REMARK 3 20 1.2804 - 1.2587 0.97 3938 207 0.1353 0.1499 REMARK 3 21 1.2587 - 1.2384 0.96 3936 208 0.1342 0.1459 REMARK 3 22 1.2384 - 1.2193 0.96 3902 205 0.1409 0.1727 REMARK 3 23 1.2193 - 1.2014 0.96 3930 207 0.1508 0.1778 REMARK 3 24 1.2014 - 1.1845 0.95 3817 201 0.1569 0.1851 REMARK 3 25 1.1845 - 1.1684 0.95 3918 206 0.1647 0.1830 REMARK 3 26 1.1684 - 1.1533 0.95 3839 202 0.1702 0.2114 REMARK 3 27 1.1533 - 1.1389 0.94 3830 202 0.1794 0.1966 REMARK 3 28 1.1389 - 1.1251 0.92 3760 197 0.1886 0.2194 REMARK 3 29 1.1251 - 1.1120 0.92 3762 198 0.2014 0.2049 REMARK 3 30 1.1120 - 1.0995 0.90 3631 192 0.2160 0.2137 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.070 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 11.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2613 REMARK 3 ANGLE : 1.262 3593 REMARK 3 CHIRALITY : 0.072 423 REMARK 3 PLANARITY : 0.006 467 REMARK 3 DIHEDRAL : 10.809 882 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Y38 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000206776. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918409 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 125104 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.100 REMARK 200 RESOLUTION RANGE LOW (A) : 42.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 3.777 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05300 REMARK 200 FOR THE DATA SET : 13.7500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.17 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.74 REMARK 200 R MERGE FOR SHELL (I) : 0.46200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.650 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 3PCW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M AMMONIUM ACETATE, 0.1 M SODIUM REMARK 280 ACETATE, 24-30% PEG 4000, CRYSTALS OBTAINED BY STREAK SEEDING, REMARK 280 PH 4.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.45000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 63 CE NZ REMARK 470 LYS A 68 CD CE NZ REMARK 470 LYS A 110 CE NZ REMARK 470 LYS A 142 NZ REMARK 470 LYS A 191 CG CD CE NZ REMARK 470 LYS A 243 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ2 LYS A 311 O HOH A 506 1.52 REMARK 500 O HOH A 730 O HOH A 766 1.95 REMARK 500 O HOH A 507 O HOH A 617 2.06 REMARK 500 O HOH A 720 O HOH A 769 2.15 REMARK 500 O HOH A 750 O HOH A 772 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 H TYR A 185 HO2 GOL A 405 1655 1.34 REMARK 500 O HOH A 521 O HOH A 595 1556 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 129 -169.94 -79.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0A9 A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 413 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 414 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PLL RELATED DB: PDB REMARK 900 RELATED ID: 4Y35 RELATED DB: PDB REMARK 900 RELATED ID: 4Y36 RELATED DB: PDB REMARK 900 RELATED ID: 4Y37 RELATED DB: PDB REMARK 900 RELATED ID: 4Y39 RELATED DB: PDB REMARK 900 RELATED ID: 4Y3A RELATED DB: PDB REMARK 900 RELATED ID: 4Y3D RELATED DB: PDB REMARK 900 RELATED ID: 4Y3E RELATED DB: PDB REMARK 900 RELATED ID: 4Y3F RELATED DB: PDB REMARK 900 RELATED ID: 4Y3G RELATED DB: PDB REMARK 900 RELATED ID: 4Y3H RELATED DB: PDB REMARK 900 RELATED ID: 4Y3L RELATED DB: PDB REMARK 900 RELATED ID: 4Y3M RELATED DB: PDB REMARK 900 RELATED ID: 4Y3P RELATED DB: PDB REMARK 900 RELATED ID: 4Y3Q RELATED DB: PDB REMARK 900 RELATED ID: 4Y3R RELATED DB: PDB REMARK 900 RELATED ID: 4Y3S RELATED DB: PDB REMARK 900 RELATED ID: 4Y3T RELATED DB: PDB REMARK 900 RELATED ID: 4Y3W RELATED DB: PDB REMARK 900 RELATED ID: 4Y3X RELATED DB: PDB REMARK 900 RELATED ID: 4Y3Z RELATED DB: PDB REMARK 900 RELATED ID: 4Y41 RELATED DB: PDB REMARK 900 RELATED ID: 4Y43 RELATED DB: PDB REMARK 900 RELATED ID: 4Y44 RELATED DB: PDB REMARK 900 RELATED ID: 4Y45 RELATED DB: PDB REMARK 900 RELATED ID: 4Y47 RELATED DB: PDB REMARK 900 RELATED ID: 4Y4A RELATED DB: PDB REMARK 900 RELATED ID: 4Y4B RELATED DB: PDB REMARK 900 RELATED ID: 4Y4C RELATED DB: PDB REMARK 900 RELATED ID: 4Y4E RELATED DB: PDB REMARK 900 RELATED ID: 4Y4T RELATED DB: PDB REMARK 900 RELATED ID: 4Y4U RELATED DB: PDB REMARK 900 RELATED ID: 4Y4W RELATED DB: PDB REMARK 900 RELATED ID: 4Y4X RELATED DB: PDB REMARK 900 RELATED ID: 4Y4Z RELATED DB: PDB REMARK 900 RELATED ID: 4Y50 RELATED DB: PDB REMARK 900 RELATED ID: 4Y51 RELATED DB: PDB REMARK 900 RELATED ID: 4Y53 RELATED DB: PDB REMARK 900 RELATED ID: 4Y54 RELATED DB: PDB REMARK 900 RELATED ID: 4Y56 RELATED DB: PDB REMARK 900 RELATED ID: 4Y57 RELATED DB: PDB REMARK 900 RELATED ID: 4Y58 RELATED DB: PDB REMARK 900 RELATED ID: 4Y5A RELATED DB: PDB REMARK 900 RELATED ID: 4Y5B RELATED DB: PDB REMARK 900 RELATED ID: 4Y5C RELATED DB: PDB REMARK 900 RELATED ID: 4Y5E RELATED DB: PDB REMARK 900 RELATED ID: 4Y5G RELATED DB: PDB REMARK 900 RELATED ID: 4Y5K RELATED DB: PDB REMARK 900 RELATED ID: 4Y5L RELATED DB: PDB REMARK 900 RELATED ID: 4Y5M RELATED DB: PDB REMARK 900 RELATED ID: 4Y5N RELATED DB: PDB REMARK 900 RELATED ID: 4Y5P RELATED DB: PDB REMARK 900 RELATED ID: 4YCK RELATED DB: PDB REMARK 900 RELATED ID: 4YCT RELATED DB: PDB REMARK 900 RELATED ID: 4YCY RELATED DB: PDB REMARK 900 RELATED ID: 4YD3 RELATED DB: PDB REMARK 900 RELATED ID: 4YD4 RELATED DB: PDB REMARK 900 RELATED ID: 4YD5 RELATED DB: PDB REMARK 900 RELATED ID: 4YD6 RELATED DB: PDB REMARK 900 RELATED ID: 4YD7 RELATED DB: PDB REMARK 900 RELATED ID: 4Y48 RELATED DB: PDB REMARK 900 RELATED ID: 4Y4J RELATED DB: PDB REMARK 900 RELATED ID: 4Y4G RELATED DB: PDB REMARK 900 RELATED ID: 4Y4D RELATED DB: PDB REMARK 900 RELATED ID: 4Y38 RELATED DB: PDB REMARK 900 RELATED ID: 4Y3Y RELATED DB: PDB REMARK 900 RELATED ID: 4Y3J RELATED DB: PDB DBREF 4Y38 A 1 330 UNP P11838 CARP_CRYPA 90 419 SEQRES 1 A 330 SER THR GLY SER ALA THR THR THR PRO ILE ASP SER LEU SEQRES 2 A 330 ASP ASP ALA TYR ILE THR PRO VAL GLN ILE GLY THR PRO SEQRES 3 A 330 ALA GLN THR LEU ASN LEU ASP PHE ASP THR GLY SER SER SEQRES 4 A 330 ASP LEU TRP VAL PHE SER SER GLU THR THR ALA SER GLU SEQRES 5 A 330 VAL ASP GLY GLN THR ILE TYR THR PRO SER LYS SER THR SEQRES 6 A 330 THR ALA LYS LEU LEU SER GLY ALA THR TRP SER ILE SER SEQRES 7 A 330 TYR GLY ASP GLY SER SER SER SER GLY ASP VAL TYR THR SEQRES 8 A 330 ASP THR VAL SER VAL GLY GLY LEU THR VAL THR GLY GLN SEQRES 9 A 330 ALA VAL GLU SER ALA LYS LYS VAL SER SER SER PHE THR SEQRES 10 A 330 GLU ASP SER THR ILE ASP GLY LEU LEU GLY LEU ALA PHE SEQRES 11 A 330 SER THR LEU ASN THR VAL SER PRO THR GLN GLN LYS THR SEQRES 12 A 330 PHE PHE ASP ASN ALA LYS ALA SER LEU ASP SER PRO VAL SEQRES 13 A 330 PHE THR ALA ASP LEU GLY TYR HIS ALA PRO GLY THR TYR SEQRES 14 A 330 ASN PHE GLY PHE ILE ASP THR THR ALA TYR THR GLY SER SEQRES 15 A 330 ILE THR TYR THR ALA VAL SER THR LYS GLN GLY PHE TRP SEQRES 16 A 330 GLU TRP THR SER THR GLY TYR ALA VAL GLY SER GLY THR SEQRES 17 A 330 PHE LYS SER THR SER ILE ASP GLY ILE ALA ASP THR GLY SEQRES 18 A 330 THR THR LEU LEU TYR LEU PRO ALA THR VAL VAL SER ALA SEQRES 19 A 330 TYR TRP ALA GLN VAL SER GLY ALA LYS SER SER SER SER SEQRES 20 A 330 VAL GLY GLY TYR VAL PHE PRO CYS SER ALA THR LEU PRO SEQRES 21 A 330 SER PHE THR PHE GLY VAL GLY SER ALA ARG ILE VAL ILE SEQRES 22 A 330 PRO GLY ASP TYR ILE ASP PHE GLY PRO ILE SER THR GLY SEQRES 23 A 330 SER SER SER CYS PHE GLY GLY ILE GLN SER SER ALA GLY SEQRES 24 A 330 ILE GLY ILE ASN ILE PHE GLY ASP VAL ALA LEU LYS ALA SEQRES 25 A 330 ALA PHE VAL VAL PHE ASN GLY ALA THR THR PRO THR LEU SEQRES 26 A 330 GLY PHE ALA SER LYS HET GOL A 401 14 HET GOL A 402 14 HET GOL A 403 14 HET GOL A 404 14 HET GOL A 405 14 HET ACT A 406 7 HET ACT A 407 7 HET ACT A 408 7 HET DMS A 409 10 HET DMS A 410 10 HET 0A9 A 411 13 HET DMS A 412 10 HET DMS A 413 10 HET DMS A 414 10 HETNAM GOL GLYCEROL HETNAM ACT ACETATE ION HETNAM DMS DIMETHYL SULFOXIDE HETNAM 0A9 METHYL L-PHENYLALANINATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 5(C3 H8 O3) FORMUL 7 ACT 3(C2 H3 O2 1-) FORMUL 10 DMS 5(C2 H6 O S) FORMUL 12 0A9 C10 H13 N O2 FORMUL 16 HOH *305(H2 O) HELIX 1 AA1 THR A 49 VAL A 53 5 5 HELIX 2 AA2 THR A 60 SER A 64 5 5 HELIX 3 AA3 SER A 113 GLU A 118 1 6 HELIX 4 AA4 PHE A 130 ASN A 134 5 5 HELIX 5 AA5 THR A 143 LYS A 149 1 7 HELIX 6 AA6 PRO A 228 ALA A 237 1 10 HELIX 7 AA7 PRO A 274 TYR A 277 5 4 HELIX 8 AA8 GLY A 306 LYS A 311 1 6 SHEET 1 AA1 9 LYS A 68 SER A 78 0 SHEET 2 AA1 9 SER A 84 VAL A 96 -1 O VAL A 89 N LEU A 70 SHEET 3 AA1 9 TYR A 17 ILE A 23 -1 N GLN A 22 O SER A 95 SHEET 4 AA1 9 GLY A 3 PRO A 9 -1 N THR A 8 O ILE A 18 SHEET 5 AA1 9 GLY A 167 PHE A 171 -1 O PHE A 171 N GLY A 3 SHEET 6 AA1 9 VAL A 156 ASP A 160 -1 N THR A 158 O ASN A 170 SHEET 7 AA1 9 PHE A 314 ASN A 318 -1 O PHE A 317 N PHE A 157 SHEET 8 AA1 9 THR A 324 ALA A 328 -1 O ALA A 328 N PHE A 314 SHEET 9 AA1 9 THR A 184 ALA A 187 -1 N THR A 184 O PHE A 327 SHEET 1 AA213 LYS A 68 SER A 78 0 SHEET 2 AA213 SER A 84 VAL A 96 -1 O VAL A 89 N LEU A 70 SHEET 3 AA213 LEU A 99 VAL A 112 -1 O VAL A 106 N TYR A 90 SHEET 4 AA213 LEU A 41 VAL A 43 1 N LEU A 41 O GLU A 107 SHEET 5 AA213 GLY A 124 GLY A 127 -1 O LEU A 125 N TRP A 42 SHEET 6 AA213 GLN A 28 ASP A 35 1 N ASP A 35 O LEU A 126 SHEET 7 AA213 TYR A 17 ILE A 23 -1 N VAL A 21 O LEU A 30 SHEET 8 AA213 GLY A 3 PRO A 9 -1 N THR A 8 O ILE A 18 SHEET 9 AA213 GLY A 167 PHE A 171 -1 O PHE A 171 N GLY A 3 SHEET 10 AA213 VAL A 156 ASP A 160 -1 N THR A 158 O ASN A 170 SHEET 11 AA213 PHE A 314 ASN A 318 -1 O PHE A 317 N PHE A 157 SHEET 12 AA213 THR A 324 ALA A 328 -1 O ALA A 328 N PHE A 314 SHEET 13 AA213 THR A 184 ALA A 187 -1 N THR A 184 O PHE A 327 SHEET 1 AA3 7 ALA A 269 ILE A 273 0 SHEET 2 AA3 7 PHE A 262 VAL A 266 -1 N PHE A 262 O ILE A 273 SHEET 3 AA3 7 GLU A 196 VAL A 204 -1 N ALA A 203 O THR A 263 SHEET 4 AA3 7 LYS A 210 ALA A 218 -1 O LYS A 210 N TYR A 202 SHEET 5 AA3 7 ASN A 303 PHE A 305 1 O PHE A 305 N ILE A 217 SHEET 6 AA3 7 LEU A 225 LEU A 227 -1 N TYR A 226 O ILE A 304 SHEET 7 AA3 7 ILE A 294 SER A 296 1 O GLN A 295 N LEU A 225 SHEET 1 AA4 4 LYS A 243 SER A 245 0 SHEET 2 AA4 4 GLY A 250 PRO A 254 -1 O GLY A 250 N SER A 245 SHEET 3 AA4 4 SER A 289 GLY A 292 -1 O CYS A 290 N PHE A 253 SHEET 4 AA4 4 ASP A 279 PRO A 282 -1 N GLY A 281 O PHE A 291 SSBOND 1 CYS A 255 CYS A 290 1555 1555 2.05 CISPEP 1 THR A 25 PRO A 26 0 -8.02 CISPEP 2 SER A 137 PRO A 138 0 6.49 SITE 1 AC1 9 TYR A 202 ALA A 203 VAL A 204 GLY A 207 SITE 2 AC1 9 THR A 208 LYS A 210 HOH A 504 HOH A 532 SITE 3 AC1 9 HOH A 728 SITE 1 AC2 7 SER A 297 ALA A 298 GLY A 301 ILE A 302 SITE 2 AC2 7 HOH A 511 HOH A 533 HOH A 679 SITE 1 AC3 3 THR A 6 GLY A 167 THR A 168 SITE 1 AC4 7 VAL A 272 TYR A 277 ALA A 312 SER A 329 SITE 2 AC4 7 LYS A 330 HOH A 522 HOH A 644 SITE 1 AC5 7 TYR A 185 ILE A 283 SER A 287 SER A 288 SITE 2 AC5 7 SER A 289 HOH A 503 HOH A 761 SITE 1 AC6 7 CYS A 255 ASP A 279 GLY A 281 PRO A 282 SITE 2 AC6 7 CYS A 290 HOH A 554 HOH A 709 SITE 1 AC7 5 ILE A 283 SER A 284 THR A 285 ASN A 318 SITE 2 AC7 5 HOH A 501 SITE 1 AC8 5 SER A 233 TRP A 236 ALA A 242 HOH A 513 SITE 2 AC8 5 HOH A 724 SITE 1 AC9 3 ALA A 187 THR A 198 ASP A 215 SITE 1 AD1 3 SER A 113 SER A 114 SER A 115 SITE 1 AD2 12 ASP A 33 ASP A 35 TYR A 79 GLY A 80 SITE 2 AD2 12 ASP A 81 SER A 83 ASP A 219 GLY A 221 SITE 3 AD2 12 THR A 222 DMS A 412 HOH A 526 HOH A 563 SITE 1 AD3 5 GLY A 221 THR A 222 THR A 223 0A9 A 411 SITE 2 AD3 5 HOH A 525 SITE 1 AD4 2 PRO A 26 ALA A 27 SITE 1 AD5 4 SER A 46 GLU A 47 THR A 48 ALA A 50 CRYST1 45.052 72.900 52.099 90.00 108.73 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022197 0.000000 0.007525 0.00000 SCALE2 0.000000 0.013717 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020267 0.00000