HEADER SIGNALING PROTEIN 11-FEB-15 4Y5I TITLE CRYSTAL STRUCTURE OF C-TERMINAL MODIFIED TAU PEPTIDE-HYBRID 126B WITH TITLE 2 14-3-3SIGMA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 14-3-3 PROTEIN SIGMA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-231; COMPND 5 SYNONYM: EPITHELIAL CELL MARKER PROTEIN 1,STRATIFIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: MICROTUBULE-ASSOCIATED PROTEIN TAU; COMPND 9 CHAIN: F, G; COMPND 10 FRAGMENT: UNP RESIDUES 528-534; COMPND 11 SYNONYM: NEUROFIBRILLARY TANGLE PROTEIN,PAIRED HELICAL FILAMENT-TAU, COMPND 12 PHF-TAU; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SFN, HME1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS 14-3-3 SIGMA, PROTEIN-PROTEIN INTERACTION, INHIBITOR, TAU, PEPTIDE- KEYWDS 2 HYBRID, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.LEYSEN,M.BARTEL,L.MILROY,L.BRUNSVELD,C.OTTMANN REVDAT 4 10-JAN-24 4Y5I 1 REMARK LINK REVDAT 3 13-MAR-19 4Y5I 1 REMARK SITE ATOM REVDAT 2 27-JAN-16 4Y5I 1 JRNL REVDAT 1 13-JAN-16 4Y5I 0 JRNL AUTH L.G.MILROY,M.BARTEL,M.A.HENEN,S.LEYSEN,J.M.ADRIAANS, JRNL AUTH 2 L.BRUNSVELD,I.LANDRIEU,C.OTTMANN JRNL TITL STABILIZER-GUIDED INHIBITION OF PROTEIN-PROTEIN JRNL TITL 2 INTERACTIONS. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 54 15720 2015 JRNL REFN ESSN 1521-3773 JRNL PMID 26537010 JRNL DOI 10.1002/ANIE.201507976 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 113422 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.148 REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.172 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 5678 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.1488 - 4.3489 1.00 3859 214 0.1778 0.1928 REMARK 3 2 4.3489 - 3.4522 1.00 3713 192 0.1402 0.1551 REMARK 3 3 3.4522 - 3.0160 1.00 3651 185 0.1565 0.1858 REMARK 3 4 3.0160 - 2.7403 1.00 3651 201 0.1621 0.1595 REMARK 3 5 2.7403 - 2.5439 1.00 3598 198 0.1579 0.1785 REMARK 3 6 2.5439 - 2.3939 1.00 3644 178 0.1482 0.1700 REMARK 3 7 2.3939 - 2.2740 1.00 3623 181 0.1431 0.1652 REMARK 3 8 2.2740 - 2.1750 1.00 3606 180 0.1375 0.1608 REMARK 3 9 2.1750 - 2.0913 1.00 3596 197 0.1337 0.1653 REMARK 3 10 2.0913 - 2.0191 1.00 3584 193 0.1340 0.1506 REMARK 3 11 2.0191 - 1.9560 1.00 3569 189 0.1367 0.1611 REMARK 3 12 1.9560 - 1.9001 1.00 3557 204 0.1433 0.1597 REMARK 3 13 1.9001 - 1.8501 1.00 3580 187 0.1398 0.1772 REMARK 3 14 1.8501 - 1.8049 1.00 3559 198 0.1385 0.1877 REMARK 3 15 1.8049 - 1.7639 1.00 3570 220 0.1356 0.1612 REMARK 3 16 1.7639 - 1.7263 1.00 3580 187 0.1329 0.1898 REMARK 3 17 1.7263 - 1.6918 1.00 3553 189 0.1281 0.1713 REMARK 3 18 1.6918 - 1.6599 1.00 3528 198 0.1222 0.1530 REMARK 3 19 1.6599 - 1.6302 1.00 3581 180 0.1205 0.1782 REMARK 3 20 1.6302 - 1.6026 1.00 3585 167 0.1161 0.1621 REMARK 3 21 1.6026 - 1.5768 1.00 3529 203 0.1168 0.1626 REMARK 3 22 1.5768 - 1.5525 1.00 3576 192 0.1233 0.1644 REMARK 3 23 1.5525 - 1.5297 1.00 3573 182 0.1257 0.1602 REMARK 3 24 1.5297 - 1.5081 1.00 3531 205 0.1273 0.1720 REMARK 3 25 1.5081 - 1.4877 1.00 3563 177 0.1325 0.1664 REMARK 3 26 1.4877 - 1.4684 1.00 3539 162 0.1340 0.1880 REMARK 3 27 1.4684 - 1.4501 1.00 3635 159 0.1447 0.2070 REMARK 3 28 1.4501 - 1.4326 1.00 3525 181 0.1563 0.2156 REMARK 3 29 1.4326 - 1.4159 1.00 3572 165 0.1654 0.1872 REMARK 3 30 1.4159 - 1.4000 1.00 3514 214 0.1750 0.2332 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4046 REMARK 3 ANGLE : 0.960 5530 REMARK 3 CHIRALITY : 0.036 625 REMARK 3 PLANARITY : 0.004 711 REMARK 3 DIHEDRAL : 14.050 1635 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Y5I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000206888. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99983 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 113518 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 64.553 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07700 REMARK 200 FOR THE DATA SET : 17.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.20 REMARK 200 R MERGE FOR SHELL (I) : 0.76000 REMARK 200 R SYM FOR SHELL (I) : 0.76000 REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 4FL5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES/NAOH PH 7.1, 0.19 M CACL2, REMARK 280 24% PEG 400, 5% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.55250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.55350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.10650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.55350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.55250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.10650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, G REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -31.55250 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -35.10650 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 71 REMARK 465 GLU A 72 REMARK 465 GLY A 73 REMARK 465 SER A 74 REMARK 465 GLU A 75 REMARK 465 GLU A 76 REMARK 465 LYS A 77 REMARK 465 GLU A 110 REMARK 465 ALA A 111 REMARK 465 ASN B 70 REMARK 465 GLU B 71 REMARK 465 GLU B 72 REMARK 465 GLY B 73 REMARK 465 SER B 74 REMARK 465 GLU B 75 REMARK 465 LYS B 77 REMARK 465 THR B 231 REMARK 465 ACE G 1 REMARK 465 ARG G 2 REMARK 465 PIP G 9 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ILE A 168 CA CB CG1 CG2 CD1 REMARK 480 LEU A 193 CA CB CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 506 O HOH B 583 1.81 REMARK 500 NH2 ARG A 142 O HOH A 401 1.86 REMARK 500 OD1 ASP A 204 O HOH A 402 1.88 REMARK 500 O HOH B 455 O HOH B 645 1.91 REMARK 500 O HOH A 642 O HOH A 667 1.92 REMARK 500 O HOH B 404 O HOH B 449 1.92 REMARK 500 O HOH B 569 O HOH B 715 1.93 REMARK 500 O HOH A 419 O HOH A 431 1.93 REMARK 500 O HOH A 414 O HOH A 430 1.93 REMARK 500 O HOH A 431 O HOH A 660 1.94 REMARK 500 O HOH A 431 O HOH A 511 1.95 REMARK 500 O HOH A 572 O HOH A 630 1.97 REMARK 500 O HOH F 112 O HOH F 114 2.00 REMARK 500 OD1 ASP A 138 O HOH A 403 2.01 REMARK 500 O HOH B 628 O HOH B 721 2.02 REMARK 500 O HOH B 633 O HOH B 662 2.03 REMARK 500 O HOH B 491 O HOH B 635 2.03 REMARK 500 OD1 ASP B 104 O HOH B 401 2.05 REMARK 500 O HOH B 402 O HOH B 645 2.05 REMARK 500 O HOH A 648 O HOH A 663 2.07 REMARK 500 O HOH B 405 O HOH B 543 2.08 REMARK 500 NE2 HIS A 206 O HOH A 404 2.09 REMARK 500 OE2 GLU A 210 O HOH A 405 2.09 REMARK 500 O HOH A 424 O HOH A 653 2.09 REMARK 500 OD2 ASP A 104 O HOH A 406 2.11 REMARK 500 O ACE F 1 O HOH F 101 2.12 REMARK 500 O HOH B 653 O HOH B 668 2.12 REMARK 500 O HOH A 471 O HOH A 738 2.12 REMARK 500 O HOH A 638 O HOH A 734 2.13 REMARK 500 OE1 GLU B 153 O HOH B 402 2.14 REMARK 500 OG SER B 186 O HOH B 403 2.14 REMARK 500 N GLU B 76 O HOH B 404 2.14 REMARK 500 O ALA B -3 O HOH B 405 2.14 REMARK 500 NH2 ARG A 60 O HOH A 407 2.16 REMARK 500 O HOH B 454 O HOH B 648 2.16 REMARK 500 OD2 ASP A 97 O HOH A 408 2.18 REMARK 500 O HOH A 589 O HOH A 632 2.19 REMARK 500 O HOH A 409 O HOH A 448 2.19 REMARK 500 O HOH A 734 O HOH F 116 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 410 O HOH A 591 4455 1.99 REMARK 500 O HOH A 630 O HOH B 608 1455 2.10 REMARK 500 O HOH A 410 O HOH A 697 4455 2.10 REMARK 500 O HOH A 672 O HOH B 406 4455 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG F 2 NE ARG F 2 CZ 0.144 REMARK 500 ARG F 2 CZ ARG F 2 NH2 0.111 REMARK 500 LEU F 6 C PRO F 7 N 0.123 REMARK 500 THR G 3 C PRO G 4 N 0.125 REMARK 500 LEU G 6 C PRO G 7 N 0.140 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 18 77.29 -102.52 REMARK 500 THR A 136 -48.62 -135.90 REMARK 500 ARG B 18 77.32 -100.18 REMARK 500 HIS B 106 37.23 -146.18 REMARK 500 THR B 136 -58.81 -125.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 764 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH B 750 DISTANCE = 6.01 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Ligand PIP F 9 bound to THR F 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE F 1 and ARG F 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4Y3B RELATED DB: PDB REMARK 900 4Y3B CONTAINS THE SAME PROTEIN COMPLEXED WITH A DIFFERENTLY REMARK 900 CHEMICALLY MODIFIED PEPTIDE LIGAND 201D. REMARK 900 RELATED ID: 4Y32 RELATED DB: PDB REMARK 900 4Y32 CONTAINS THE SAME PROTEIN COMPLEXED WITH A DIFFERENTLY REMARK 900 CHEMICALLY MODIFIED PEPTIDE LIGAND 109B. REMARK 900 RELATED ID: 4Y3V RELATED DB: PDB REMARK 900 4Y3V CONTAINS THE SAME PROTEIN COMPLEXED WITH A DIFFERENTLY REMARK 900 CHEMICALLY MODIFIED PEPTIDE LIGAND 126A. DBREF 4Y5I A 1 231 UNP P31947 1433S_HUMAN 1 231 DBREF 4Y5I B 1 231 UNP P31947 1433S_HUMAN 1 231 DBREF 4Y5I F 2 8 UNP P10636 TAU_HUMAN 528 534 DBREF 4Y5I G 2 8 UNP P10636 TAU_HUMAN 528 534 SEQADV 4Y5I GLY A -4 UNP P31947 EXPRESSION TAG SEQADV 4Y5I ALA A -3 UNP P31947 EXPRESSION TAG SEQADV 4Y5I MET A -2 UNP P31947 EXPRESSION TAG SEQADV 4Y5I GLY A -1 UNP P31947 EXPRESSION TAG SEQADV 4Y5I SER A 0 UNP P31947 EXPRESSION TAG SEQADV 4Y5I GLY B -4 UNP P31947 EXPRESSION TAG SEQADV 4Y5I ALA B -3 UNP P31947 EXPRESSION TAG SEQADV 4Y5I MET B -2 UNP P31947 EXPRESSION TAG SEQADV 4Y5I GLY B -1 UNP P31947 EXPRESSION TAG SEQADV 4Y5I SER B 0 UNP P31947 EXPRESSION TAG SEQADV 4Y5I ACE F 1 UNP P10636 ACETYLATION SEQADV 4Y5I PIP F 9 UNP P10636 EXPRESSION TAG SEQADV 4Y5I ACE G 1 UNP P10636 ACETYLATION SEQADV 4Y5I PIP G 9 UNP P10636 EXPRESSION TAG SEQRES 1 A 236 GLY ALA MET GLY SER MET GLU ARG ALA SER LEU ILE GLN SEQRES 2 A 236 LYS ALA LYS LEU ALA GLU GLN ALA GLU ARG TYR GLU ASP SEQRES 3 A 236 MET ALA ALA PHE MET LYS GLY ALA VAL GLU LYS GLY GLU SEQRES 4 A 236 GLU LEU SER CYS GLU GLU ARG ASN LEU LEU SER VAL ALA SEQRES 5 A 236 TYR LYS ASN VAL VAL GLY GLY GLN ARG ALA ALA TRP ARG SEQRES 6 A 236 VAL LEU SER SER ILE GLU GLN LYS SER ASN GLU GLU GLY SEQRES 7 A 236 SER GLU GLU LYS GLY PRO GLU VAL ARG GLU TYR ARG GLU SEQRES 8 A 236 LYS VAL GLU THR GLU LEU GLN GLY VAL CYS ASP THR VAL SEQRES 9 A 236 LEU GLY LEU LEU ASP SER HIS LEU ILE LYS GLU ALA GLY SEQRES 10 A 236 ASP ALA GLU SER ARG VAL PHE TYR LEU LYS MET LYS GLY SEQRES 11 A 236 ASP TYR TYR ARG TYR LEU ALA GLU VAL ALA THR GLY ASP SEQRES 12 A 236 ASP LYS LYS ARG ILE ILE ASP SER ALA ARG SER ALA TYR SEQRES 13 A 236 GLN GLU ALA MET ASP ILE SER LYS LYS GLU MET PRO PRO SEQRES 14 A 236 THR ASN PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER SEQRES 15 A 236 VAL PHE HIS TYR GLU ILE ALA ASN SER PRO GLU GLU ALA SEQRES 16 A 236 ILE SER LEU ALA LYS THR THR PHE ASP GLU ALA MET ALA SEQRES 17 A 236 ASP LEU HIS THR LEU SER GLU ASP SER TYR LYS ASP SER SEQRES 18 A 236 THR LEU ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU SEQRES 19 A 236 TRP THR SEQRES 1 B 236 GLY ALA MET GLY SER MET GLU ARG ALA SER LEU ILE GLN SEQRES 2 B 236 LYS ALA LYS LEU ALA GLU GLN ALA GLU ARG TYR GLU ASP SEQRES 3 B 236 MET ALA ALA PHE MET LYS GLY ALA VAL GLU LYS GLY GLU SEQRES 4 B 236 GLU LEU SER CYS GLU GLU ARG ASN LEU LEU SER VAL ALA SEQRES 5 B 236 TYR LYS ASN VAL VAL GLY GLY GLN ARG ALA ALA TRP ARG SEQRES 6 B 236 VAL LEU SER SER ILE GLU GLN LYS SER ASN GLU GLU GLY SEQRES 7 B 236 SER GLU GLU LYS GLY PRO GLU VAL ARG GLU TYR ARG GLU SEQRES 8 B 236 LYS VAL GLU THR GLU LEU GLN GLY VAL CYS ASP THR VAL SEQRES 9 B 236 LEU GLY LEU LEU ASP SER HIS LEU ILE LYS GLU ALA GLY SEQRES 10 B 236 ASP ALA GLU SER ARG VAL PHE TYR LEU LYS MET LYS GLY SEQRES 11 B 236 ASP TYR TYR ARG TYR LEU ALA GLU VAL ALA THR GLY ASP SEQRES 12 B 236 ASP LYS LYS ARG ILE ILE ASP SER ALA ARG SER ALA TYR SEQRES 13 B 236 GLN GLU ALA MET ASP ILE SER LYS LYS GLU MET PRO PRO SEQRES 14 B 236 THR ASN PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER SEQRES 15 B 236 VAL PHE HIS TYR GLU ILE ALA ASN SER PRO GLU GLU ALA SEQRES 16 B 236 ILE SER LEU ALA LYS THR THR PHE ASP GLU ALA MET ALA SEQRES 17 B 236 ASP LEU HIS THR LEU SER GLU ASP SER TYR LYS ASP SER SEQRES 18 B 236 THR LEU ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU SEQRES 19 B 236 TRP THR SEQRES 1 F 9 ACE ARG THR PRO SEP LEU PRO THR PIP SEQRES 1 G 9 ACE ARG THR PRO SEP LEU PRO THR PIP MODRES 4Y5I SEP F 5 SER MODIFIED RESIDUE MODRES 4Y5I SEP G 5 SER MODIFIED RESIDUE HET ACE F 1 3 HET SEP F 5 10 HET PIP F 9 6 HET SEP G 5 10 HET CL A 301 1 HET CL B 301 1 HETNAM ACE ACETYL GROUP HETNAM SEP PHOSPHOSERINE HETNAM PIP PIPERIDINE HETNAM CL CHLORIDE ION HETSYN SEP PHOSPHONOSERINE FORMUL 3 ACE C2 H4 O FORMUL 3 SEP 2(C3 H8 N O6 P) FORMUL 3 PIP C5 H11 N FORMUL 5 CL 2(CL 1-) FORMUL 7 HOH *743(H2 O) HELIX 1 AA1 GLU A 2 ALA A 16 1 15 HELIX 2 AA2 ARG A 18 GLU A 31 1 14 HELIX 3 AA3 SER A 37 ASN A 70 1 34 HELIX 4 AA4 PRO A 79 HIS A 106 1 28 HELIX 5 AA5 ASP A 113 ALA A 135 1 23 HELIX 6 AA6 GLY A 137 MET A 162 1 26 HELIX 7 AA7 ASN A 166 ILE A 183 1 18 HELIX 8 AA8 SER A 186 LEU A 205 1 20 HELIX 9 AA9 HIS A 206 LEU A 208 5 3 HELIX 10 AB1 SER A 209 THR A 231 1 23 HELIX 11 AB2 GLU B 2 ALA B 16 1 15 HELIX 12 AB3 ARG B 18 GLU B 31 1 14 HELIX 13 AB4 SER B 37 SER B 69 1 33 HELIX 14 AB5 PRO B 79 SER B 105 1 27 HELIX 15 AB6 HIS B 106 ALA B 111 1 6 HELIX 16 AB7 ASP B 113 ALA B 135 1 23 HELIX 17 AB8 GLY B 137 MET B 162 1 26 HELIX 18 AB9 ASN B 166 ILE B 183 1 18 HELIX 19 AC1 SER B 186 ALA B 203 1 18 HELIX 20 AC2 ASP B 204 LEU B 208 5 5 HELIX 21 AC3 SER B 209 TRP B 230 1 22 LINK C ACE F 1 N ARG F 2 1555 1555 1.45 LINK C PRO F 4 N SEP F 5 1555 1555 1.46 LINK C SEP F 5 N LEU F 6 1555 1555 1.44 LINK C THR F 8 N1 PIP F 9 1555 1555 1.46 LINK C PRO G 4 N SEP G 5 1555 1555 1.47 LINK C SEP G 5 N LEU G 6 1555 1555 1.44 CISPEP 1 SER B 105 HIS B 106 0 8.41 CISPEP 2 PRO G 7 THR G 8 0 1.03 SITE 1 AC1 3 LYS A 9 HOH B 655 HOH B 698 SITE 1 AC2 2 HOH A 720 LYS B 9 SITE 1 AC3 6 ASN A 42 SER A 45 VAL A 46 HOH A 547 SITE 2 AC3 6 HIS B 206 THR F 8 SITE 1 AC4 7 ARG A 60 GLU A 182 THR F 3 PRO F 4 SITE 2 AC4 7 HOH F 101 HOH F 102 HOH F 113 CRYST1 63.105 70.213 129.107 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015847 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014242 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007746 0.00000