HEADER TRANSFERASE 16-FEB-15 4Y7T TITLE STRUCTURAL ANALYSIS OF MURU COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOTIDYL TRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MURU; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 931281; SOURCE 4 STRAIN: BIRD-1; SOURCE 5 GENE: PPUBIRD1_0444; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET29B KEYWDS NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN, URIDYLTRANSFERASE, ROSSMAN KEYWDS 2 FOLD, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.G.RENNER-SCHNECK,T.STEHLE REVDAT 3 06-MAY-15 4Y7T 1 JRNL REVDAT 2 25-MAR-15 4Y7T 1 JRNL REVDAT 1 18-MAR-15 4Y7T 0 JRNL AUTH M.RENNER-SCHNECK,I.HINDERBERGER,J.GISIN,T.EXNER,C.MAYER, JRNL AUTH 2 T.STEHLE JRNL TITL CRYSTAL STRUCTURE OF THE N-ACETYLMURAMIC ACID JRNL TITL 2 ALPHA-1-PHOSPHATE (MURNAC-ALPHA 1-P) URIDYLYLTRANSFERASE JRNL TITL 3 MURU, A MINIMAL SUGAR NUCLEOTIDYLTRANSFERASE AND POTENTIAL JRNL TITL 4 DRUG TARGET ENZYME IN GRAM-NEGATIVE PATHOGENS. JRNL REF J.BIOL.CHEM. V. 290 10804 2015 JRNL REFN ESSN 1083-351X JRNL PMID 25767118 JRNL DOI 10.1074/JBC.M114.620989 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.040 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23688 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1185 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.4565 - 3.5993 1.00 3057 161 0.1684 0.1916 REMARK 3 2 3.5993 - 2.8571 1.00 2854 151 0.2165 0.2644 REMARK 3 3 2.8571 - 2.4960 1.00 2813 148 0.2494 0.2838 REMARK 3 4 2.4960 - 2.2678 1.00 2784 146 0.2324 0.2535 REMARK 3 5 2.2678 - 2.1053 1.00 2773 146 0.2510 0.3070 REMARK 3 6 2.1053 - 1.9812 1.00 2749 145 0.3184 0.3809 REMARK 3 7 1.9812 - 1.8820 1.00 2756 145 0.2969 0.3535 REMARK 3 8 1.8820 - 1.8000 0.99 2717 143 0.3190 0.3649 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.090 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 1764 REMARK 3 ANGLE : 1.526 2405 REMARK 3 CHIRALITY : 0.066 268 REMARK 3 PLANARITY : 0.008 307 REMARK 3 DIHEDRAL : 15.150 652 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:79) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3485 31.0780 -0.4944 REMARK 3 T TENSOR REMARK 3 T11: 0.2430 T22: 0.3851 REMARK 3 T33: 0.3149 T12: 0.0250 REMARK 3 T13: -0.0326 T23: 0.0267 REMARK 3 L TENSOR REMARK 3 L11: 3.0413 L22: 2.8321 REMARK 3 L33: 2.3903 L12: -0.9994 REMARK 3 L13: 0.2965 L23: -0.4716 REMARK 3 S TENSOR REMARK 3 S11: 0.0904 S12: 0.0342 S13: -0.1942 REMARK 3 S21: -0.0477 S22: -0.0047 S23: 0.3363 REMARK 3 S31: -0.0019 S32: -0.2403 S33: -0.0917 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 80:133) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3956 27.5047 9.1526 REMARK 3 T TENSOR REMARK 3 T11: 0.2513 T22: 0.3200 REMARK 3 T33: 0.3301 T12: 0.0206 REMARK 3 T13: -0.0212 T23: 0.0189 REMARK 3 L TENSOR REMARK 3 L11: 4.2677 L22: 2.8501 REMARK 3 L33: 3.3876 L12: 2.1149 REMARK 3 L13: 0.7615 L23: -0.0728 REMARK 3 S TENSOR REMARK 3 S11: 0.1494 S12: -0.0067 S13: -0.0314 REMARK 3 S21: -0.0812 S22: -0.1141 S23: -0.0479 REMARK 3 S31: 0.2111 S32: -0.1917 S33: -0.0531 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 139:171) REMARK 3 ORIGIN FOR THE GROUP (A): 26.7541 31.8259 17.1293 REMARK 3 T TENSOR REMARK 3 T11: 0.3225 T22: 0.3982 REMARK 3 T33: 0.2469 T12: -0.0175 REMARK 3 T13: -0.0206 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 6.0215 L22: 4.9133 REMARK 3 L33: 3.2223 L12: 1.4388 REMARK 3 L13: 0.1495 L23: -1.2787 REMARK 3 S TENSOR REMARK 3 S11: 0.2668 S12: -0.6461 S13: 0.2467 REMARK 3 S21: 0.5948 S22: -0.2518 S23: -0.1869 REMARK 3 S31: -0.2602 S32: 0.1066 S33: -0.0441 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 172:191) REMARK 3 ORIGIN FOR THE GROUP (A): 16.1434 27.0516 22.6646 REMARK 3 T TENSOR REMARK 3 T11: 0.3979 T22: 0.7030 REMARK 3 T33: 0.3876 T12: -0.1044 REMARK 3 T13: -0.0218 T23: 0.0389 REMARK 3 L TENSOR REMARK 3 L11: 3.2800 L22: 4.7379 REMARK 3 L33: 6.9830 L12: -3.1328 REMARK 3 L13: 3.5003 L23: -0.9831 REMARK 3 S TENSOR REMARK 3 S11: 0.3683 S12: -1.1501 S13: -0.1581 REMARK 3 S21: 0.3627 S22: -0.2138 S23: 0.6068 REMARK 3 S31: 0.1949 S32: -1.1983 S33: -0.0335 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 192:224) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3127 40.4535 2.9413 REMARK 3 T TENSOR REMARK 3 T11: 0.3706 T22: 0.3861 REMARK 3 T33: 0.3323 T12: -0.0335 REMARK 3 T13: -0.0066 T23: 0.0899 REMARK 3 L TENSOR REMARK 3 L11: 4.0964 L22: 2.6373 REMARK 3 L33: 2.5693 L12: -0.6166 REMARK 3 L13: 1.3340 L23: 0.6123 REMARK 3 S TENSOR REMARK 3 S11: -0.0285 S12: 0.4330 S13: 0.6273 REMARK 3 S21: -0.1841 S22: -0.2399 S23: -0.2423 REMARK 3 S31: -0.6994 S32: 0.3518 S33: 0.2332 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Y7T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000204395. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 93.2 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23700 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: (NH4)2SO4, MES, PH 6.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.82333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 105.64667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 79.23500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 132.05833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 26.41167 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 52.82333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 105.64667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 132.05833 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 79.23500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 26.41167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 134 REMARK 465 HIS A 135 REMARK 465 HIS A 136 REMARK 465 GLY A 137 REMARK 465 ARG A 138 REMARK 465 ALA A 154 REMARK 465 GLU A 225 REMARK 465 HIS A 226 REMARK 465 HIS A 227 REMARK 465 HIS A 228 REMARK 465 HIS A 229 REMARK 465 HIS A 230 REMARK 465 HIS A 231 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 12 CD OE1 OE2 REMARK 470 ASP A 98 OD2 REMARK 470 GLN A 118 OE1 REMARK 470 GLN A 122 CG CD OE1 NE2 REMARK 470 ASP A 150 OD2 REMARK 470 ASP A 152 CG OD1 OD2 REMARK 470 ASP A 153 CG OD1 OD2 REMARK 470 GLU A 172 CG CD OE1 OE2 REMARK 470 GLU A 221 CD OE1 OE2 REMARK 470 ARG A 222 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 224 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 402 O HOH A 402 7555 2.05 REMARK 500 O HOH A 402 O HOH A 423 7555 2.13 REMARK 500 O HOH A 424 O HOH A 424 12555 2.16 REMARK 500 O HOH A 423 O HOH A 423 7555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 7 30.66 -149.81 REMARK 500 ALA A 54 -80.18 -155.76 REMARK 500 GLU A 84 168.09 63.28 REMARK 500 PRO A 120 105.12 -49.49 REMARK 500 PHE A 171 56.19 -103.34 REMARK 500 CYS A 174 -7.28 -154.60 REMARK 500 GLN A 175 76.71 114.08 REMARK 500 ALA A 178 95.76 68.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 306 DBREF 4Y7T A 1 223 UNP E4RE40 E4RE40_PSEPB 1 223 SEQADV 4Y7T LEU A 224 UNP E4RE40 EXPRESSION TAG SEQADV 4Y7T GLU A 225 UNP E4RE40 EXPRESSION TAG SEQADV 4Y7T HIS A 226 UNP E4RE40 EXPRESSION TAG SEQADV 4Y7T HIS A 227 UNP E4RE40 EXPRESSION TAG SEQADV 4Y7T HIS A 228 UNP E4RE40 EXPRESSION TAG SEQADV 4Y7T HIS A 229 UNP E4RE40 EXPRESSION TAG SEQADV 4Y7T HIS A 230 UNP E4RE40 EXPRESSION TAG SEQADV 4Y7T HIS A 231 UNP E4RE40 EXPRESSION TAG SEQRES 1 A 231 MET LYS ALA MET ILE LEU ALA ALA GLY LYS GLY GLU ARG SEQRES 2 A 231 MET ARG PRO LEU THR LEU HIS THR PRO LYS PRO LEU VAL SEQRES 3 A 231 PRO VAL ALA GLY GLN PRO LEU ILE GLU TYR HIS LEU ARG SEQRES 4 A 231 ALA LEU ALA ALA ALA GLY VAL THR GLU VAL VAL ILE ASN SEQRES 5 A 231 HIS ALA TRP LEU GLY GLN GLN ILE GLU ASP HIS LEU GLY SEQRES 6 A 231 ASP GLY SER ARG PHE GLY LEU SER ILE ARG TYR SER PRO SEQRES 7 A 231 GLU GLY GLU PRO LEU GLU THR GLY GLY GLY ILE PHE LYS SEQRES 8 A 231 ALA LEU PRO LEU LEU GLY ASP ALA PRO PHE LEU LEU VAL SEQRES 9 A 231 ASN GLY ASP VAL TRP THR ASP TYR ASP PHE ALA ARG LEU SEQRES 10 A 231 GLN ALA PRO LEU GLN GLY LEU ALA HIS LEU VAL LEU VAL SEQRES 11 A 231 ASP ASN PRO GLY HIS HIS GLY ARG GLY ASP PHE ARG LEU SEQRES 12 A 231 VAL GLY GLU GLN VAL VAL ASP GLY ASP ASP ALA PRO GLY SEQRES 13 A 231 THR LEU THR PHE SER GLY ILE SER VAL LEU HIS PRO ALA SEQRES 14 A 231 LEU PHE GLU GLY CYS GLN ALA GLY ALA PHE LYS LEU ALA SEQRES 15 A 231 PRO LEU LEU ARG GLN ALA MET ALA ALA GLY LYS VAL SER SEQRES 16 A 231 GLY GLU HIS TYR ARG GLY HIS TRP VAL ASP VAL GLY THR SEQRES 17 A 231 LEU GLU ARG LEU ALA GLU ALA GLU SER LEU ILE GLY GLU SEQRES 18 A 231 ARG ALA LEU GLU HIS HIS HIS HIS HIS HIS HET GOL A 301 28 HET GOL A 302 14 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET SO4 A 306 5 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 2(C3 H8 O3) FORMUL 4 SO4 4(O4 S 2-) FORMUL 8 HOH *80(H2 O) HELIX 1 AA1 GLY A 11 ARG A 15 5 5 HELIX 2 AA2 PRO A 22 LEU A 25 5 4 HELIX 3 AA3 LEU A 33 ALA A 44 1 12 HELIX 4 AA4 LEU A 56 GLY A 65 1 10 HELIX 5 AA5 GLY A 67 GLY A 71 5 5 HELIX 6 AA6 LEU A 83 GLY A 97 1 15 HELIX 7 AA7 ASP A 113 ALA A 119 5 7 HELIX 8 AA8 PRO A 168 GLU A 172 5 5 HELIX 9 AA9 LEU A 181 ALA A 191 1 11 HELIX 10 AB1 THR A 208 ALA A 223 1 16 SHEET 1 AA1 7 SER A 73 PRO A 78 0 SHEET 2 AA1 7 GLU A 48 HIS A 53 1 N ILE A 51 O SER A 77 SHEET 3 AA1 7 ALA A 3 ALA A 7 1 N ILE A 5 O VAL A 50 SHEET 4 AA1 7 PHE A 101 ASN A 105 1 O LEU A 102 N MET A 4 SHEET 5 AA1 7 THR A 159 LEU A 166 -1 O SER A 164 N LEU A 103 SHEET 6 AA1 7 ALA A 125 VAL A 130 -1 N VAL A 130 O THR A 159 SHEET 7 AA1 7 VAL A 194 HIS A 198 1 O GLU A 197 N LEU A 129 SHEET 1 AA2 2 PRO A 27 VAL A 28 0 SHEET 2 AA2 2 GLN A 31 PRO A 32 -1 O GLN A 31 N VAL A 28 SHEET 1 AA3 2 VAL A 108 THR A 110 0 SHEET 2 AA3 2 TRP A 203 ASP A 205 -1 O VAL A 204 N TRP A 109 SHEET 1 AA4 2 PHE A 141 VAL A 144 0 SHEET 2 AA4 2 GLN A 147 ASP A 150 -1 O GLN A 147 N VAL A 144 CISPEP 1 ARG A 15 PRO A 16 0 7.04 CISPEP 2 PRO A 155 GLY A 156 0 2.67 CISPEP 3 GLU A 172 GLY A 173 0 -3.46 CISPEP 4 GLY A 173 CYS A 174 0 -1.68 SITE 1 AC1 6 LEU A 117 ALA A 119 PRO A 120 LEU A 121 SITE 2 AC1 6 GLN A 122 GLY A 123 SITE 1 AC2 6 GLN A 175 ALA A 178 PHE A 179 GLN A 187 SITE 2 AC2 6 ALA A 191 HOH A 403 SITE 1 AC3 5 THR A 85 LYS A 180 LEU A 181 ALA A 182 SITE 2 AC3 5 HOH A 457 SITE 1 AC4 3 ARG A 211 GLU A 214 HOH A 465 SITE 1 AC5 5 GLY A 11 GLU A 12 ARG A 13 HOH A 458 SITE 2 AC5 5 HOH A 464 SITE 1 AC6 6 LEU A 64 ASP A 66 GLY A 67 SER A 68 SITE 2 AC6 6 ARG A 69 ARG A 200 CRYST1 72.610 72.610 158.470 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013772 0.007951 0.000000 0.00000 SCALE2 0.000000 0.015903 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006310 0.00000