HEADER ISOMERASE 19-FEB-15 4YCC TITLE STRUCTURE OF A SINGLE TRYPTOPHAN MUTANT OF ACETOBACTER ACETI PURE WITH TITLE 2 Y154L MUTATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE MUTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: N5-CAIR MUTASE,5-(CARBOXYAMINO)IMIDAZOLE RIBONUCLEOTIDE COMPND 5 MUTASE; COMPND 6 EC: 5.4.99.18; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACETOBACTER ACETI 1023; SOURCE 3 ORGANISM_TAXID: 1457393; SOURCE 4 GENE: PURE, AZ09_02690; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET23A KEYWDS ACIDOPHILE, PURE, PURINE BIOSYNTHESIS, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.J.KAPPOCK,K.L.SULLIVAN REVDAT 3 27-SEP-23 4YCC 1 REMARK REVDAT 2 01-JUN-16 4YCC 1 TITLE REVDAT 1 24-FEB-16 4YCC 0 JRNL AUTH K.L.SULLIVAN,S.TRANCHIMAND,T.J.KAPPOCK JRNL TITL STRUCTURE OF A SINGLE TRYPTOPHAN MUTANT OF ACETOBACTER ACETI JRNL TITL 2 PURE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.26 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.26 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 19655 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.130 REMARK 3 R VALUE (WORKING SET) : 0.128 REMARK 3 FREE R VALUE : 0.171 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.810 REMARK 3 FREE R VALUE TEST SET COUNT : 945 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.7410 - 4.3168 0.97 2785 132 0.1185 0.1341 REMARK 3 2 4.3168 - 3.4266 0.98 2692 133 0.1110 0.1482 REMARK 3 3 3.4266 - 2.9935 0.99 2683 137 0.1317 0.1912 REMARK 3 4 2.9935 - 2.7198 0.99 2631 150 0.1439 0.2112 REMARK 3 5 2.7198 - 2.5249 0.99 2670 126 0.1420 0.1915 REMARK 3 6 2.5249 - 2.3760 1.00 2648 144 0.1419 0.2072 REMARK 3 7 2.3760 - 2.2570 0.98 2601 123 0.1452 0.2134 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.22 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2401 REMARK 3 ANGLE : 1.235 3283 REMARK 3 CHIRALITY : 0.050 404 REMARK 3 PLANARITY : 0.007 425 REMARK 3 DIHEDRAL : 12.651 872 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 20 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8002 30.1854 -35.8619 REMARK 3 T TENSOR REMARK 3 T11: 0.2405 T22: 0.2178 REMARK 3 T33: 0.2588 T12: -0.0007 REMARK 3 T13: -0.0296 T23: 0.0802 REMARK 3 L TENSOR REMARK 3 L11: 6.2827 L22: 2.8819 REMARK 3 L33: 6.3537 L12: 0.4551 REMARK 3 L13: -1.2837 L23: 4.1004 REMARK 3 S TENSOR REMARK 3 S11: -0.1369 S12: 0.3299 S13: 0.1921 REMARK 3 S21: -0.2209 S22: 0.2077 S23: 0.2578 REMARK 3 S31: -0.2418 S32: -0.0586 S33: 0.0070 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7532 22.9335 -41.1895 REMARK 3 T TENSOR REMARK 3 T11: 0.2572 T22: 0.2750 REMARK 3 T33: 0.2243 T12: -0.0384 REMARK 3 T13: 0.0206 T23: 0.0369 REMARK 3 L TENSOR REMARK 3 L11: 4.4358 L22: 6.8551 REMARK 3 L33: 6.2425 L12: -5.3682 REMARK 3 L13: 0.2773 L23: -0.2441 REMARK 3 S TENSOR REMARK 3 S11: 0.1980 S12: 0.4745 S13: 0.2765 REMARK 3 S21: -0.3366 S22: -0.2215 S23: -0.2832 REMARK 3 S31: 0.2729 S32: 0.0285 S33: -0.0260 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 47 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9147 27.6026 -36.3412 REMARK 3 T TENSOR REMARK 3 T11: 0.1759 T22: 0.1683 REMARK 3 T33: 0.1776 T12: -0.0121 REMARK 3 T13: 0.0067 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 4.9653 L22: 5.7186 REMARK 3 L33: 4.9005 L12: -4.6721 REMARK 3 L13: 4.7412 L23: -4.2839 REMARK 3 S TENSOR REMARK 3 S11: -0.0394 S12: 0.3942 S13: 0.2483 REMARK 3 S21: -0.0522 S22: -0.1534 S23: -0.1063 REMARK 3 S31: -0.0320 S32: 0.2725 S33: 0.0830 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.1915 30.4445 -28.7983 REMARK 3 T TENSOR REMARK 3 T11: 0.2632 T22: 0.2363 REMARK 3 T33: 0.3276 T12: -0.0539 REMARK 3 T13: 0.0099 T23: 0.0313 REMARK 3 L TENSOR REMARK 3 L11: 5.6087 L22: 8.7209 REMARK 3 L33: 3.5410 L12: -6.8678 REMARK 3 L13: -4.0710 L23: 4.9190 REMARK 3 S TENSOR REMARK 3 S11: 0.0796 S12: -0.0523 S13: 0.8743 REMARK 3 S21: 0.0729 S22: 0.0233 S23: -0.6930 REMARK 3 S31: -0.2137 S32: -0.0358 S33: -0.1613 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2572 26.5259 -27.0800 REMARK 3 T TENSOR REMARK 3 T11: 0.1713 T22: 0.1714 REMARK 3 T33: 0.1376 T12: -0.0047 REMARK 3 T13: 0.0093 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 3.8752 L22: 4.0925 REMARK 3 L33: 2.8777 L12: -1.5001 REMARK 3 L13: 0.9240 L23: -0.5278 REMARK 3 S TENSOR REMARK 3 S11: 0.0011 S12: -0.1341 S13: 0.2913 REMARK 3 S21: 0.0615 S22: -0.0844 S23: -0.1162 REMARK 3 S31: -0.1187 S32: 0.0360 S33: 0.0706 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.5732 5.8120 -34.8563 REMARK 3 T TENSOR REMARK 3 T11: 0.4611 T22: 0.4321 REMARK 3 T33: 0.3001 T12: 0.0657 REMARK 3 T13: -0.0180 T23: -0.0585 REMARK 3 L TENSOR REMARK 3 L11: 1.6858 L22: 2.1999 REMARK 3 L33: 3.7076 L12: -1.4716 REMARK 3 L13: 0.0928 L23: -0.7728 REMARK 3 S TENSOR REMARK 3 S11: 0.2208 S12: 1.1754 S13: -0.6302 REMARK 3 S21: -1.4082 S22: -0.5018 S23: 0.6279 REMARK 3 S31: 0.6016 S32: 0.2280 S33: 0.5131 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.1523 21.8951 -26.7500 REMARK 3 T TENSOR REMARK 3 T11: 0.1410 T22: 0.1503 REMARK 3 T33: 0.1255 T12: -0.0346 REMARK 3 T13: 0.0209 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 3.2838 L22: 4.5450 REMARK 3 L33: 1.7894 L12: -2.8184 REMARK 3 L13: 0.5459 L23: -0.6476 REMARK 3 S TENSOR REMARK 3 S11: -0.0005 S12: 0.0061 S13: 0.1335 REMARK 3 S21: 0.0420 S22: -0.0930 S23: -0.1327 REMARK 3 S31: -0.0454 S32: -0.0205 S33: 0.0925 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.3761 31.8675 -35.0451 REMARK 3 T TENSOR REMARK 3 T11: 0.2172 T22: 0.2315 REMARK 3 T33: 0.2129 T12: 0.0614 REMARK 3 T13: -0.0211 T23: 0.0302 REMARK 3 L TENSOR REMARK 3 L11: 8.6679 L22: 9.6593 REMARK 3 L33: 2.6403 L12: 8.6943 REMARK 3 L13: 4.4676 L23: 3.8307 REMARK 3 S TENSOR REMARK 3 S11: 0.1824 S12: -0.1015 S13: -0.0261 REMARK 3 S21: 0.2921 S22: -0.2012 S23: -0.1182 REMARK 3 S31: 0.0620 S32: -0.0941 S33: 0.0102 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 172 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.4490 13.7143 -43.6748 REMARK 3 T TENSOR REMARK 3 T11: 0.5438 T22: 0.3217 REMARK 3 T33: 0.2682 T12: -0.0255 REMARK 3 T13: -0.0415 T23: 0.0358 REMARK 3 L TENSOR REMARK 3 L11: 9.7202 L22: 3.5938 REMARK 3 L33: 2.2063 L12: 5.4849 REMARK 3 L13: 3.2975 L23: 1.7118 REMARK 3 S TENSOR REMARK 3 S11: -0.1546 S12: 0.4877 S13: -0.3007 REMARK 3 S21: -1.7320 S22: 0.4499 S23: 0.3429 REMARK 3 S31: 0.3266 S32: -0.2181 S33: -0.2966 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5405 27.9186 -11.6595 REMARK 3 T TENSOR REMARK 3 T11: 0.2543 T22: 0.3011 REMARK 3 T33: 0.1481 T12: 0.0402 REMARK 3 T13: -0.0311 T23: -0.0678 REMARK 3 L TENSOR REMARK 3 L11: 8.3317 L22: 2.6426 REMARK 3 L33: 7.5800 L12: 1.5021 REMARK 3 L13: -1.6179 L23: -4.4189 REMARK 3 S TENSOR REMARK 3 S11: 0.0144 S12: -0.4500 S13: 0.4773 REMARK 3 S21: 0.4661 S22: -0.1303 S23: -0.1942 REMARK 3 S31: -0.1776 S32: -0.0297 S33: 0.1964 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 31 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.8074 22.3436 -6.2018 REMARK 3 T TENSOR REMARK 3 T11: 0.3225 T22: 0.3080 REMARK 3 T33: 0.1739 T12: 0.0541 REMARK 3 T13: -0.0332 T23: -0.0510 REMARK 3 L TENSOR REMARK 3 L11: 3.7510 L22: 3.0638 REMARK 3 L33: 5.1927 L12: 1.6633 REMARK 3 L13: -3.3153 L23: -3.5369 REMARK 3 S TENSOR REMARK 3 S11: 0.0693 S12: -0.4703 S13: 0.1602 REMARK 3 S21: 0.8046 S22: 0.0490 S23: 0.0714 REMARK 3 S31: 0.0607 S32: 0.2486 S33: -0.0191 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 47 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.2968 24.1840 -17.5102 REMARK 3 T TENSOR REMARK 3 T11: 0.2655 T22: 0.2186 REMARK 3 T33: 0.1758 T12: 0.0401 REMARK 3 T13: 0.0077 T23: -0.0120 REMARK 3 L TENSOR REMARK 3 L11: 2.6665 L22: 2.6858 REMARK 3 L33: 1.4243 L12: 0.6412 REMARK 3 L13: -0.2302 L23: 0.2990 REMARK 3 S TENSOR REMARK 3 S11: 0.0301 S12: -0.0069 S13: 0.2157 REMARK 3 S21: 0.1457 S22: -0.0071 S23: 0.2651 REMARK 3 S31: -0.1202 S32: -0.1694 S33: -0.0249 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 108 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0327 4.6149 -12.1871 REMARK 3 T TENSOR REMARK 3 T11: 0.4817 T22: 0.4155 REMARK 3 T33: 0.3311 T12: -0.1055 REMARK 3 T13: -0.0300 T23: 0.0277 REMARK 3 L TENSOR REMARK 3 L11: 2.1214 L22: 1.5068 REMARK 3 L33: 4.8021 L12: 1.2396 REMARK 3 L13: 2.6294 L23: 2.6424 REMARK 3 S TENSOR REMARK 3 S11: 0.5753 S12: -1.3414 S13: -0.8232 REMARK 3 S21: 1.6725 S22: -0.3851 S23: -0.6994 REMARK 3 S31: 0.3790 S32: 0.0760 S33: 0.0849 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 115 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5464 21.4974 -20.5470 REMARK 3 T TENSOR REMARK 3 T11: 0.1043 T22: 0.1934 REMARK 3 T33: 0.1298 T12: 0.0242 REMARK 3 T13: 0.0270 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 2.0391 L22: 6.1274 REMARK 3 L33: 2.4738 L12: 1.0967 REMARK 3 L13: -0.0066 L23: -0.2523 REMARK 3 S TENSOR REMARK 3 S11: -0.0488 S12: -0.0848 S13: 0.0731 REMARK 3 S21: 0.1318 S22: 0.0413 S23: 0.0340 REMARK 3 S31: -0.0282 S32: -0.0302 S33: 0.0192 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 155 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6140 35.2789 -12.4031 REMARK 3 T TENSOR REMARK 3 T11: 0.3860 T22: 0.3550 REMARK 3 T33: 0.3751 T12: -0.0353 REMARK 3 T13: -0.0087 T23: -0.1768 REMARK 3 L TENSOR REMARK 3 L11: 2.1929 L22: 2.2340 REMARK 3 L33: 1.3177 L12: 1.3364 REMARK 3 L13: 0.8161 L23: -0.6202 REMARK 3 S TENSOR REMARK 3 S11: -0.2177 S12: -0.4213 S13: 0.6952 REMARK 3 S21: 0.1778 S22: 0.4091 S23: -0.3209 REMARK 3 S31: -0.2334 S32: 0.2997 S33: 0.0646 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 172 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.6056 19.8849 -3.9932 REMARK 3 T TENSOR REMARK 3 T11: 0.3606 T22: 0.4012 REMARK 3 T33: 0.3279 T12: 0.0409 REMARK 3 T13: -0.0689 T23: -0.0631 REMARK 3 L TENSOR REMARK 3 L11: 4.1296 L22: 9.9667 REMARK 3 L33: 5.3528 L12: -4.2357 REMARK 3 L13: 1.7631 L23: -6.3971 REMARK 3 S TENSOR REMARK 3 S11: -0.8603 S12: -0.8593 S13: 0.3804 REMARK 3 S21: 1.1581 S22: 0.4682 S23: -1.6092 REMARK 3 S31: -0.5340 S32: 0.0658 S33: 0.2057 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YCC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000207199. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-DEC-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19655 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : 0.10200 REMARK 200 FOR THE DATA SET : 37.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 8.10 REMARK 200 R MERGE FOR SHELL (I) : 0.24000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 10.60 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4YCB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% W/V PEG 4000, 0.1 M TRIS-HCL, 0.2 REMARK 280 M LITHIUM SULFATE, PH 8.3, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 49.72900 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 49.72900 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 82.78350 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 49.72900 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 49.72900 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 82.78350 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 49.72900 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 49.72900 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 82.78350 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 49.72900 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 49.72900 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 82.78350 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 49.72900 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 49.72900 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 82.78350 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 49.72900 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 49.72900 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 82.78350 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 49.72900 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 49.72900 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 82.78350 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 49.72900 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 49.72900 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 82.78350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 35770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -335.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 405 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLU A 3 REMARK 465 THR A 4 REMARK 465 ALA A 5 REMARK 465 PRO A 6 REMARK 465 LEU A 7 REMARK 465 PRO A 8 REMARK 465 SER A 9 REMARK 465 ALA A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 ALA A 13 REMARK 465 LEU A 14 REMARK 465 GLU A 15 REMARK 465 ASP A 16 REMARK 465 LYS A 17 REMARK 465 ALA A 18 REMARK 465 ALA A 19 REMARK 465 GLU A 180 REMARK 465 ASP A 181 REMARK 465 LYS A 182 REMARK 465 MET B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLU B 3 REMARK 465 THR B 4 REMARK 465 ALA B 5 REMARK 465 PRO B 6 REMARK 465 LEU B 7 REMARK 465 PRO B 8 REMARK 465 SER B 9 REMARK 465 ALA B 10 REMARK 465 SER B 11 REMARK 465 SER B 12 REMARK 465 ALA B 13 REMARK 465 LEU B 14 REMARK 465 GLU B 15 REMARK 465 ASP B 16 REMARK 465 LYS B 17 REMARK 465 ALA B 18 REMARK 465 ALA B 19 REMARK 465 GLU B 180 REMARK 465 ASP B 181 REMARK 465 LYS B 182 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 398 O HOH A 408 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 123 38.57 -80.94 REMARK 500 GLN B 123 37.85 -83.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1U11 RELATED DB: PDB REMARK 900 WILD-TYPE FORM OF AAPURE REMARK 900 RELATED ID: 4YCB RELATED DB: PDB REMARK 900 SAME PROTEIN, EXCEPT THAT IT POSSESSES THE WILD TYPE TYR154 REMARK 900 RELATED ID: 4YCD RELATED DB: PDB REMARK 900 SAME PROTEIN, EXCEPT THAT IT POSSESSES THE TYR154PHE MUTANT REMARK 900 RELATED ID: 4YCJ RELATED DB: PDB REMARK 900 SAME AS 1U11 PLUS TYR154PHE MUTANT DBREF1 4YCC A 1 182 UNP A0A063X4U8_ACEAC DBREF2 4YCC A A0A063X4U8 1 182 DBREF1 4YCC B 1 182 UNP A0A063X4U8_ACEAC DBREF2 4YCC B A0A063X4U8 1 182 SEQADV 4YCC MET A 0 UNP A0A063X4U INITIATING METHIONINE SEQADV 4YCC PHE A 34 UNP A0A063X4U TRP 34 ENGINEERED MUTATION SEQADV 4YCC LEU A 154 UNP A0A063X4U TYR 154 ENGINEERED MUTATION SEQADV 4YCC PHE A 165 UNP A0A063X4U TRP 165 ENGINEERED MUTATION SEQADV 4YCC MET B 0 UNP A0A063X4U INITIATING METHIONINE SEQADV 4YCC PHE B 34 UNP A0A063X4U TRP 34 ENGINEERED MUTATION SEQADV 4YCC LEU B 154 UNP A0A063X4U TYR 154 ENGINEERED MUTATION SEQADV 4YCC PHE B 165 UNP A0A063X4U TRP 165 ENGINEERED MUTATION SEQRES 1 A 183 MET MET SER GLU THR ALA PRO LEU PRO SER ALA SER SER SEQRES 2 A 183 ALA LEU GLU ASP LYS ALA ALA SER ALA PRO VAL VAL GLY SEQRES 3 A 183 ILE ILE MET GLY SER GLN SER ASP PHE GLU THR MET ARG SEQRES 4 A 183 HIS ALA ASP ALA LEU LEU THR GLU LEU GLU ILE PRO HIS SEQRES 5 A 183 GLU THR LEU ILE VAL SER ALA HIS ARG THR PRO ASP ARG SEQRES 6 A 183 LEU ALA ASP TYR ALA ARG THR ALA ALA GLU ARG GLY LEU SEQRES 7 A 183 ASN VAL ILE ILE ALA GLY ALA GLY GLY ALA ALA HIS LEU SEQRES 8 A 183 PRO GLY MET CYS ALA ALA TRP THR ARG LEU PRO VAL LEU SEQRES 9 A 183 GLY VAL PRO VAL GLU SER ARG ALA LEU LYS GLY MET ASP SEQRES 10 A 183 SER LEU LEU SER ILE VAL GLN MET PRO GLY GLY VAL PRO SEQRES 11 A 183 VAL GLY THR LEU ALA ILE GLY ALA SER GLY ALA LYS ASN SEQRES 12 A 183 ALA ALA LEU LEU ALA ALA SER ILE LEU ALA LEU LEU ASN SEQRES 13 A 183 PRO ALA LEU ALA ALA ARG LEU GLU THR PHE ARG ALA LEU SEQRES 14 A 183 GLN THR ALA SER VAL PRO ASN SER PRO ILE THR GLU ASP SEQRES 15 A 183 LYS SEQRES 1 B 183 MET MET SER GLU THR ALA PRO LEU PRO SER ALA SER SER SEQRES 2 B 183 ALA LEU GLU ASP LYS ALA ALA SER ALA PRO VAL VAL GLY SEQRES 3 B 183 ILE ILE MET GLY SER GLN SER ASP PHE GLU THR MET ARG SEQRES 4 B 183 HIS ALA ASP ALA LEU LEU THR GLU LEU GLU ILE PRO HIS SEQRES 5 B 183 GLU THR LEU ILE VAL SER ALA HIS ARG THR PRO ASP ARG SEQRES 6 B 183 LEU ALA ASP TYR ALA ARG THR ALA ALA GLU ARG GLY LEU SEQRES 7 B 183 ASN VAL ILE ILE ALA GLY ALA GLY GLY ALA ALA HIS LEU SEQRES 8 B 183 PRO GLY MET CYS ALA ALA TRP THR ARG LEU PRO VAL LEU SEQRES 9 B 183 GLY VAL PRO VAL GLU SER ARG ALA LEU LYS GLY MET ASP SEQRES 10 B 183 SER LEU LEU SER ILE VAL GLN MET PRO GLY GLY VAL PRO SEQRES 11 B 183 VAL GLY THR LEU ALA ILE GLY ALA SER GLY ALA LYS ASN SEQRES 12 B 183 ALA ALA LEU LEU ALA ALA SER ILE LEU ALA LEU LEU ASN SEQRES 13 B 183 PRO ALA LEU ALA ALA ARG LEU GLU THR PHE ARG ALA LEU SEQRES 14 B 183 GLN THR ALA SER VAL PRO ASN SER PRO ILE THR GLU ASP SEQRES 15 B 183 LYS HET EDO A 201 4 HET SO4 A 202 5 HET EDO A 203 4 HET ACT B 201 4 HET SO4 B 202 5 HET SO4 B 203 5 HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 2(C2 H6 O2) FORMUL 4 SO4 3(O4 S 2-) FORMUL 6 ACT C2 H3 O2 1- FORMUL 9 HOH *225(H2 O) HELIX 1 AA1 SER A 30 SER A 32 5 3 HELIX 2 AA2 ASP A 33 LEU A 47 1 15 HELIX 3 AA3 THR A 61 ALA A 73 1 13 HELIX 4 AA4 HIS A 89 THR A 98 1 10 HELIX 5 AA5 GLY A 114 GLN A 123 1 10 HELIX 6 AA6 GLY A 136 ALA A 152 1 17 HELIX 7 AA7 ASN A 155 SER A 172 1 18 HELIX 8 AA8 SER B 30 SER B 32 5 3 HELIX 9 AA9 ASP B 33 LEU B 47 1 15 HELIX 10 AB1 THR B 61 ALA B 72 1 12 HELIX 11 AB2 HIS B 89 THR B 98 1 10 HELIX 12 AB3 GLY B 114 GLN B 123 1 10 HELIX 13 AB4 GLY B 136 ALA B 152 1 17 HELIX 14 AB5 ASN B 155 SER B 172 1 18 SHEET 1 AA1 5 HIS A 51 ILE A 55 0 SHEET 2 AA1 5 VAL A 24 MET A 28 1 N ILE A 26 O LEU A 54 SHEET 3 AA1 5 VAL A 79 GLY A 85 1 O ILE A 81 N GLY A 25 SHEET 4 AA1 5 VAL A 102 VAL A 107 1 O LEU A 103 N ALA A 82 SHEET 5 AA1 5 GLY A 131 THR A 132 1 O GLY A 131 N VAL A 102 SHEET 1 AA2 5 HIS B 51 ILE B 55 0 SHEET 2 AA2 5 VAL B 24 MET B 28 1 N ILE B 26 O GLU B 52 SHEET 3 AA2 5 VAL B 79 GLY B 85 1 O ILE B 81 N GLY B 25 SHEET 4 AA2 5 VAL B 102 VAL B 107 1 O LEU B 103 N ILE B 80 SHEET 5 AA2 5 GLY B 131 THR B 132 1 O GLY B 131 N GLY B 104 SSBOND 1 SO4 B 203 SO4 B 203 1555 5555 1.95 SITE 1 AC1 3 ASN A 175 SER A 176 HOH A 304 SITE 1 AC2 7 SER A 57 ALA A 58 HIS A 59 HOH A 302 SITE 2 AC2 7 HOH A 345 HOH A 355 HOH A 359 SITE 1 AC3 5 TRP A 97 ARG A 99 GLU B 163 ARG B 166 SITE 2 AC3 5 HOH B 329 SITE 1 AC4 2 ASN B 155 ARG B 161 SITE 1 AC5 8 PRO A 125 SER B 57 ALA B 58 HIS B 59 SITE 2 AC5 8 ARG B 60 HOH B 301 HOH B 304 HOH B 337 SITE 1 AC6 2 ARG B 38 HIS B 39 CRYST1 99.458 99.458 165.567 90.00 90.00 90.00 I 4 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010054 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010054 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006040 0.00000