HEADER VIRAL PROTEIN 23-FEB-15 4YE7 TITLE N-TERMINAL DOMAIN OF ORF22, A CYDIA POMONELLA GRANULOVIRUS ENVELOPE TITLE 2 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ORF22 SIMILAR TO XCGV ORF19; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN RESIDUES 2-106; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CYDIA POMONELLA GRANULOSIS VIRUS; SOURCE 3 ORGANISM_COMMON: CPGV; SOURCE 4 ORGANISM_TAXID: 654905; SOURCE 5 STRAIN: ISOLATE MEXICO/1963; SOURCE 6 GENE: ORF22; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PDEST17 KEYWDS ENVELOPE, CALYX, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.N.BUSBY,P.METCALF REVDAT 1 09-MAR-16 4YE7 0 JRNL AUTH J.N.BUSBY,K.N.GOLDIE,P.METCALF JRNL TITL STRUCTURAL STUDIES OF GRANULOVIRUS ENVELOPE FIBRES. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.AFONINE,R.W.GROSSE-KUNSTLEVE,N.ECHOLS,J.J.HEADD, REMARK 1 AUTH 2 N.W.MORIARTY,M.MUSTYAKIMOV,T.C.TERWILLIGER,A.URZHUMTSEV, REMARK 1 AUTH 3 P.H.ZWART,P.D.ADAMS REMARK 1 TITL TOWARDS AUTOMATED CRYSTALLOGRAPHIC STRUCTURE REFINEMENT WITH REMARK 1 TITL 2 PHENIX.REFINE. REMARK 1 REF ACTA CRYSTALLOGR. D BIOL. V. 68 352 2012 REMARK 1 REF 2 CRYSTALLOGR. REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 22505256 REMARK 1 DOI 10.1107/S0907444912001308 REMARK 1 REFERENCE 2 REMARK 1 AUTH P.D.ADAMS,P.V.AFONINE,G.BUNKOCZI,V.B.CHEN,I.W.DAVIS, REMARK 1 AUTH 2 N.ECHOLS,J.J.HEADD,L.W.HUNG,G.J.KAPRAL,R.W.GROSSE-KUNSTLEVE, REMARK 1 AUTH 3 A.J.MCCOY,N.W.MORIARTY,R.OEFFNER,R.J.READ,D.C.RICHARDSON, REMARK 1 AUTH 4 J.S.RICHARDSON,T.C.TERWILLIGER,P.H.ZWART REMARK 1 TITL PHENIX: A COMPREHENSIVE PYTHON-BASED SYSTEM FOR REMARK 1 TITL 2 MACROMOLECULAR STRUCTURE SOLUTION. REMARK 1 REF ACTA CRYSTALLOGR. D BIOL. V. 66 213 2010 REMARK 1 REF 2 CRYSTALLOGR. REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 20124702 REMARK 1 DOI 10.1107/S0907444909052925 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 53873 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.928 REMARK 3 FREE R VALUE TEST SET COUNT : 2467 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.1475 - 4.3448 1.00 3272 228 0.1463 0.1608 REMARK 3 2 4.3448 - 3.4494 1.00 3297 177 0.1477 0.1944 REMARK 3 3 3.4494 - 3.0136 1.00 3364 151 0.1671 0.2239 REMARK 3 4 3.0136 - 2.7382 1.00 3332 160 0.1701 0.2197 REMARK 3 5 2.7382 - 2.5420 1.00 3281 203 0.1756 0.1716 REMARK 3 6 2.5420 - 2.3921 0.99 3302 152 0.1750 0.1945 REMARK 3 7 2.3921 - 2.2723 0.99 3344 146 0.1647 0.2118 REMARK 3 8 2.2723 - 2.1734 0.99 3236 250 0.1635 0.1904 REMARK 3 9 2.1734 - 2.0898 0.99 3307 161 0.1725 0.1976 REMARK 3 10 2.0898 - 2.0177 0.99 3277 190 0.1722 0.1842 REMARK 3 11 2.0177 - 1.9546 0.99 3286 153 0.1732 0.2024 REMARK 3 12 1.9546 - 1.8987 0.99 3228 195 0.1841 0.1867 REMARK 3 13 1.8987 - 1.8487 0.99 3318 161 0.1803 0.2286 REMARK 3 14 1.8487 - 1.8036 0.98 3226 186 0.1829 0.1717 REMARK 3 15 1.8036 - 1.7626 0.98 3354 112 0.1944 0.2322 REMARK 3 16 1.7626 - 1.7251 0.98 3258 165 0.1995 0.2368 REMARK 3 17 1.7251 - 1.6906 0.98 3291 145 0.2022 0.1856 REMARK 3 18 1.6906 - 1.6587 0.98 3287 144 0.2182 0.2518 REMARK 3 19 1.6587 - 1.6291 0.98 3291 152 0.2395 0.2972 REMARK 3 20 1.6291 - 1.6015 0.98 3159 228 0.2388 0.3055 REMARK 3 21 1.6015 - 1.5756 0.98 3270 178 0.2476 0.2609 REMARK 3 22 1.5756 - 1.5514 0.97 3225 180 0.2611 0.2741 REMARK 3 23 1.5514 - 1.5286 0.97 3212 147 0.2522 0.2617 REMARK 3 24 1.5286 - 1.5070 0.98 3303 179 0.2657 0.3091 REMARK 3 25 1.5070 - 1.4867 0.96 3210 169 0.2860 0.3146 REMARK 3 26 1.4867 - 1.4674 0.97 3230 169 0.2957 0.2805 REMARK 3 27 1.4674 - 1.4490 0.97 3190 152 0.3125 0.3340 REMARK 3 28 1.4490 - 1.4316 0.96 3255 141 0.3318 0.3552 REMARK 3 29 1.4316 - 1.4149 0.97 3271 134 0.3416 0.3848 REMARK 3 30 1.4149 - 1.4000 0.91 3003 165 0.3331 0.3283 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.179 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.501 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.12 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 1899 REMARK 3 ANGLE : 1.641 2602 REMARK 3 CHIRALITY : 0.120 285 REMARK 3 PLANARITY : 0.008 338 REMARK 3 DIHEDRAL : 12.349 695 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.4006 23.5681 22.1511 REMARK 3 T TENSOR REMARK 3 T11: 0.3011 T22: 0.1926 REMARK 3 T33: 0.3433 T12: -0.0805 REMARK 3 T13: -0.0055 T23: -0.0240 REMARK 3 L TENSOR REMARK 3 L11: 7.3928 L22: 8.2862 REMARK 3 L33: 5.0975 L12: -2.8783 REMARK 3 L13: 0.1143 L23: -0.2046 REMARK 3 S TENSOR REMARK 3 S11: 0.0208 S12: -0.3269 S13: -0.7116 REMARK 3 S21: 0.3092 S22: -0.1267 S23: -0.3037 REMARK 3 S31: 0.9420 S32: -0.1895 S33: 0.0507 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 12 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.2298 31.3406 17.8674 REMARK 3 T TENSOR REMARK 3 T11: 0.1829 T22: 0.1793 REMARK 3 T33: 0.1864 T12: 0.0015 REMARK 3 T13: 0.0040 T23: -0.0557 REMARK 3 L TENSOR REMARK 3 L11: 7.6421 L22: 4.7140 REMARK 3 L33: 3.0656 L12: -3.2681 REMARK 3 L13: 3.8435 L23: -2.3341 REMARK 3 S TENSOR REMARK 3 S11: -0.0456 S12: 0.3217 S13: -0.0941 REMARK 3 S21: 0.2392 S22: -0.2405 S23: 0.3542 REMARK 3 S31: 0.0776 S32: -0.2567 S33: 0.2227 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 21 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.7807 29.0324 31.3875 REMARK 3 T TENSOR REMARK 3 T11: 0.6588 T22: 0.2505 REMARK 3 T33: 0.2099 T12: 0.0619 REMARK 3 T13: -0.1432 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 1.2819 L22: 0.0264 REMARK 3 L33: 0.0090 L12: 0.1803 REMARK 3 L13: 0.0885 L23: 0.0104 REMARK 3 S TENSOR REMARK 3 S11: -0.2457 S12: -1.2078 S13: -0.4055 REMARK 3 S21: 2.3325 S22: 0.5370 S23: -0.4559 REMARK 3 S31: 0.8519 S32: -0.0943 S33: -0.2063 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 29 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.8887 38.3172 15.4575 REMARK 3 T TENSOR REMARK 3 T11: 0.0776 T22: 0.1249 REMARK 3 T33: 0.1380 T12: 0.0172 REMARK 3 T13: 0.0021 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 1.6041 L22: 8.5031 REMARK 3 L33: 6.0721 L12: -1.4980 REMARK 3 L13: 0.7947 L23: -3.0619 REMARK 3 S TENSOR REMARK 3 S11: -0.0454 S12: 0.1331 S13: 0.0506 REMARK 3 S21: -0.1110 S22: 0.0489 S23: 0.1512 REMARK 3 S31: -0.1410 S32: -0.2659 S33: 0.0078 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.9531 45.0498 13.4404 REMARK 3 T TENSOR REMARK 3 T11: 0.1940 T22: 0.1842 REMARK 3 T33: 0.1820 T12: -0.0041 REMARK 3 T13: 0.0426 T23: 0.0283 REMARK 3 L TENSOR REMARK 3 L11: 7.8963 L22: 4.3776 REMARK 3 L33: 7.2383 L12: -2.8545 REMARK 3 L13: 5.6015 L23: -1.5410 REMARK 3 S TENSOR REMARK 3 S11: -0.0427 S12: 0.7716 S13: 0.3277 REMARK 3 S21: -0.4298 S22: -0.2169 S23: -0.5179 REMARK 3 S31: -0.7160 S32: 0.8180 S33: 0.2050 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.3016 34.1233 20.8959 REMARK 3 T TENSOR REMARK 3 T11: 0.1529 T22: 0.2071 REMARK 3 T33: 0.2367 T12: 0.0758 REMARK 3 T13: -0.0078 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 0.0186 L22: 8.6736 REMARK 3 L33: 4.8518 L12: 0.1539 REMARK 3 L13: -0.0180 L23: 5.9937 REMARK 3 S TENSOR REMARK 3 S11: -0.0636 S12: 0.0135 S13: -0.0651 REMARK 3 S21: 0.0692 S22: 0.1265 S23: -0.4226 REMARK 3 S31: 0.2920 S32: 0.5171 S33: -0.0738 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.4776 25.4862 14.0512 REMARK 3 T TENSOR REMARK 3 T11: 0.3054 T22: 0.1681 REMARK 3 T33: 0.2358 T12: 0.0897 REMARK 3 T13: 0.0840 T23: -0.0466 REMARK 3 L TENSOR REMARK 3 L11: 2.7923 L22: 4.8855 REMARK 3 L33: 0.5812 L12: -1.2278 REMARK 3 L13: 1.1408 L23: -0.9050 REMARK 3 S TENSOR REMARK 3 S11: -0.3737 S12: 0.0192 S13: -0.3296 REMARK 3 S21: 0.3003 S22: 0.1668 S23: -0.2238 REMARK 3 S31: 0.8245 S32: 0.2997 S33: 0.1080 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 72 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.3977 45.2093 21.3659 REMARK 3 T TENSOR REMARK 3 T11: 0.1074 T22: 0.1114 REMARK 3 T33: 0.1601 T12: 0.0353 REMARK 3 T13: 0.0035 T23: 0.0200 REMARK 3 L TENSOR REMARK 3 L11: 1.1758 L22: 3.0622 REMARK 3 L33: 2.0528 L12: -0.2482 REMARK 3 L13: -0.1659 L23: 0.3820 REMARK 3 S TENSOR REMARK 3 S11: 0.0684 S12: 0.0796 S13: 0.1598 REMARK 3 S21: -0.0917 S22: 0.0304 S23: 0.1123 REMARK 3 S31: -0.3007 S32: -0.2496 S33: -0.0258 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 91 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.1629 36.6878 25.2935 REMARK 3 T TENSOR REMARK 3 T11: 0.1889 T22: 0.2819 REMARK 3 T33: 0.2125 T12: -0.0680 REMARK 3 T13: 0.0643 T23: -0.0748 REMARK 3 L TENSOR REMARK 3 L11: 3.2866 L22: 3.9767 REMARK 3 L33: 1.6272 L12: 0.9453 REMARK 3 L13: -0.2665 L23: 2.2755 REMARK 3 S TENSOR REMARK 3 S11: 0.0511 S12: 0.0685 S13: 0.0735 REMARK 3 S21: 0.8126 S22: -0.3433 S23: 0.5423 REMARK 3 S31: 0.1561 S32: -0.4068 S33: 0.2490 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.0369 42.7596 47.8727 REMARK 3 T TENSOR REMARK 3 T11: 0.1125 T22: 0.2105 REMARK 3 T33: 0.1736 T12: 0.0282 REMARK 3 T13: -0.0418 T23: 0.0677 REMARK 3 L TENSOR REMARK 3 L11: 7.8290 L22: 6.0072 REMARK 3 L33: 7.1685 L12: 1.0183 REMARK 3 L13: -0.1427 L23: 0.5517 REMARK 3 S TENSOR REMARK 3 S11: 0.0870 S12: -0.3861 S13: -0.3902 REMARK 3 S21: 0.4499 S22: 0.0374 S23: 0.0348 REMARK 3 S31: 0.2433 S32: -0.0288 S33: -0.0618 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 12 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.7892 46.8248 41.2469 REMARK 3 T TENSOR REMARK 3 T11: 0.1135 T22: 0.1696 REMARK 3 T33: 0.1562 T12: 0.0025 REMARK 3 T13: 0.0034 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 4.5843 L22: 0.7792 REMARK 3 L33: 6.6682 L12: -1.0361 REMARK 3 L13: 1.4536 L23: 0.2192 REMARK 3 S TENSOR REMARK 3 S11: -0.1339 S12: 0.0033 S13: -0.2894 REMARK 3 S21: -0.2060 S22: -0.0057 S23: -0.2983 REMARK 3 S31: 0.3033 S32: 0.2902 S33: 0.0995 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 40 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.1173 58.5407 33.4806 REMARK 3 T TENSOR REMARK 3 T11: 0.4645 T22: 0.1716 REMARK 3 T33: 0.3919 T12: 0.0573 REMARK 3 T13: 0.0317 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 3.1241 L22: 7.4776 REMARK 3 L33: 3.9031 L12: 1.6115 REMARK 3 L13: -1.6795 L23: 1.0401 REMARK 3 S TENSOR REMARK 3 S11: 0.1299 S12: -0.0354 S13: 1.3313 REMARK 3 S21: 0.1356 S22: 0.1406 S23: 1.2090 REMARK 3 S31: -1.4893 S32: -0.5294 S33: 0.2431 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 51 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.4047 48.7054 45.2182 REMARK 3 T TENSOR REMARK 3 T11: 0.0371 T22: 0.5756 REMARK 3 T33: 0.1901 T12: 0.0357 REMARK 3 T13: 0.0412 T23: -0.0410 REMARK 3 L TENSOR REMARK 3 L11: 1.9607 L22: 0.5493 REMARK 3 L33: 2.8367 L12: -0.3817 REMARK 3 L13: 0.3169 L23: 0.4774 REMARK 3 S TENSOR REMARK 3 S11: 0.0407 S12: -0.7715 S13: 0.0069 REMARK 3 S21: -0.0272 S22: 0.1080 S23: 0.2176 REMARK 3 S31: 0.3628 S32: -1.1999 S33: 0.1172 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 72 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.9725 49.4756 32.2084 REMARK 3 T TENSOR REMARK 3 T11: 0.0949 T22: 0.0865 REMARK 3 T33: 0.1390 T12: 0.0188 REMARK 3 T13: -0.0248 T23: 0.0028 REMARK 3 L TENSOR REMARK 3 L11: 5.5098 L22: 3.7369 REMARK 3 L33: 8.3398 L12: 0.8415 REMARK 3 L13: -2.4770 L23: 1.5835 REMARK 3 S TENSOR REMARK 3 S11: -0.0256 S12: 0.1005 S13: 0.1724 REMARK 3 S21: -0.1880 S22: 0.0669 S23: -0.1110 REMARK 3 S31: -0.3294 S32: -0.2490 S33: -0.0584 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 86 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.1024 52.9837 26.4090 REMARK 3 T TENSOR REMARK 3 T11: 0.3615 T22: 0.3060 REMARK 3 T33: 0.4621 T12: -0.0905 REMARK 3 T13: -0.0340 T23: 0.0485 REMARK 3 L TENSOR REMARK 3 L11: 8.2083 L22: 6.8433 REMARK 3 L33: 4.3874 L12: -4.9290 REMARK 3 L13: -1.8852 L23: 5.0485 REMARK 3 S TENSOR REMARK 3 S11: 0.1874 S12: 0.5123 S13: 1.2229 REMARK 3 S21: -1.0677 S22: -0.3451 S23: -0.1163 REMARK 3 S31: -1.2626 S32: 0.0485 S33: 0.2790 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 91 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.2120 42.2733 36.8208 REMARK 3 T TENSOR REMARK 3 T11: 0.1526 T22: 0.2381 REMARK 3 T33: 0.1924 T12: 0.0877 REMARK 3 T13: -0.0398 T23: -0.0314 REMARK 3 L TENSOR REMARK 3 L11: 1.6939 L22: 0.8024 REMARK 3 L33: 3.4062 L12: -0.4391 REMARK 3 L13: 0.7347 L23: -0.8548 REMARK 3 S TENSOR REMARK 3 S11: 0.1141 S12: -0.2256 S13: 0.2303 REMARK 3 S21: 0.0613 S22: 0.1334 S23: -0.0300 REMARK 3 S31: 0.4635 S32: 1.1350 S33: 0.0269 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YE7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000204832. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-SEP-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9779, 0.9794, 0.9537 REMARK 200 MONOCHROMATOR : DOUBLE SI CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.3.11 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53936 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 47.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 14.70 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.7 REMARK 200 DATA REDUNDANCY IN SHELL : 14.50 REMARK 200 R MERGE FOR SHELL (I) : 3.10400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 8000, 0.02 M SODIUM FORMATE, REMARK 280 0.02 M AMMONIUM ACETATE, 0.02 M TRISODIUM CITRATE, 0.02 M SODIUM REMARK 280 POTASSIUM L-TARTRATE, 0.0612 M MES, 0.0388 M IMIDAZOLE, 20% REMARK 280 ETHYLENE GLYCOL, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.78250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.64150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.60600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.64150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.78250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.60600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 GLY B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 87 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN B 90 O HOH B 201 2.02 REMARK 500 O HOH A 423 O HOH B 249 2.12 REMARK 500 OD1 ASN A 43 O HOH A 398 2.13 REMARK 500 O HOH A 421 O HOH B 258 2.15 REMARK 500 OD1 ASP B 99 O HOH B 202 2.16 REMARK 500 O HOH A 309 O HOH A 350 2.16 REMARK 500 OE2 GLU A 48 O HOH A 407 2.16 REMARK 500 OD1 ASP B 99 O HOH B 259 2.19 REMARK 500 O HOH A 433 O HOH A 442 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 338 O HOH A 348 3645 2.14 REMARK 500 O HOH B 210 O HOH B 229 4566 2.16 REMARK 500 NH1 ARG B 51 O HOH B 202 4466 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS B 87 N - CA - C ANGL. DEV. = 18.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 90 70.03 -102.53 REMARK 500 LYS B 87 -132.70 -141.09 REMARK 500 ASN B 90 82.57 63.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR B 86 LYS B 87 -136.68 REMARK 500 LYS B 87 LEU B 88 -143.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 201 DBREF 4YE7 A 2 106 UNP P87582 P87582_GVCPM 2 106 DBREF 4YE7 B 2 106 UNP P87582 P87582_GVCPM 2 106 SEQADV 4YE7 GLY A -3 UNP P87582 EXPRESSION TAG SEQADV 4YE7 SER A -2 UNP P87582 EXPRESSION TAG SEQADV 4YE7 GLY A -1 UNP P87582 EXPRESSION TAG SEQADV 4YE7 ALA A 0 UNP P87582 EXPRESSION TAG SEQADV 4YE7 MSE A 1 UNP P87582 EXPRESSION TAG SEQADV 4YE7 GLY B -3 UNP P87582 EXPRESSION TAG SEQADV 4YE7 SER B -2 UNP P87582 EXPRESSION TAG SEQADV 4YE7 GLY B -1 UNP P87582 EXPRESSION TAG SEQADV 4YE7 ALA B 0 UNP P87582 EXPRESSION TAG SEQADV 4YE7 MSE B 1 UNP P87582 EXPRESSION TAG SEQRES 1 A 110 GLY SER GLY ALA MSE SER SER ARG LEU ILE PHE SER THR SEQRES 2 A 110 ARG VAL ASP GLY THR ASP VAL PRO VAL PHE TYR SER GLY SEQRES 3 A 110 VAL ALA GLY ASP ARG PRO TYR VAL GLY VAL SER GLU LEU SEQRES 4 A 110 LEU SER ILE LEU GLY HIS SER ASN THR HIS ALA ASP GLU SEQRES 5 A 110 PHE PRO ARG SER GLU THR LYS LEU TRP ALA GLU LEU ALA SEQRES 6 A 110 PRO ASN ASP THR THR TYR SER ALA ASN LYS LEU PHE THR SEQRES 7 A 110 THR GLU VAL GLY PHE ALA VAL TYR PHE GLY LYS THR LYS SEQRES 8 A 110 LEU CYS ASN TRP ALA SER PHE LYS ARG MSE PHE ASP THR SEQRES 9 A 110 ILE ALA ALA TYR ILE ALA SEQRES 1 B 110 GLY SER GLY ALA MSE SER SER ARG LEU ILE PHE SER THR SEQRES 2 B 110 ARG VAL ASP GLY THR ASP VAL PRO VAL PHE TYR SER GLY SEQRES 3 B 110 VAL ALA GLY ASP ARG PRO TYR VAL GLY VAL SER GLU LEU SEQRES 4 B 110 LEU SER ILE LEU GLY HIS SER ASN THR HIS ALA ASP GLU SEQRES 5 B 110 PHE PRO ARG SER GLU THR LYS LEU TRP ALA GLU LEU ALA SEQRES 6 B 110 PRO ASN ASP THR THR TYR SER ALA ASN LYS LEU PHE THR SEQRES 7 B 110 THR GLU VAL GLY PHE ALA VAL TYR PHE GLY LYS THR LYS SEQRES 8 B 110 LEU CYS ASN TRP ALA SER PHE LYS ARG MSE PHE ASP THR SEQRES 9 B 110 ILE ALA ALA TYR ILE ALA MODRES 4YE7 MSE A 97 MET MODIFIED RESIDUE MODRES 4YE7 MSE B 97 MET MODIFIED RESIDUE HET MSE A 1 8 HET MSE A 97 13 HET MSE B 97 16 HET ACT A 201 4 HETNAM MSE SELENOMETHIONINE HETNAM ACT ACETATE ION FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 3 ACT C2 H3 O2 1- FORMUL 4 HOH *268(H2 O) HELIX 1 AA1 VAL A 32 GLY A 40 1 9 HELIX 2 AA2 SER A 42 PHE A 49 5 8 HELIX 3 AA3 PRO A 50 SER A 52 5 3 HELIX 4 AA4 TRP A 57 ALA A 61 1 5 HELIX 5 AA5 GLU A 76 LYS A 87 1 12 HELIX 6 AA6 ASN A 90 ALA A 106 1 17 HELIX 7 AA7 VAL B 32 GLY B 40 1 9 HELIX 8 AA8 SER B 42 PHE B 49 5 8 HELIX 9 AA9 PRO B 50 SER B 52 5 3 HELIX 10 AB1 TRP B 57 ALA B 61 1 5 HELIX 11 AB2 GLU B 76 THR B 86 1 11 HELIX 12 AB3 ASN B 90 ALA B 106 1 17 SHEET 1 AA1 5 LEU A 5 VAL A 11 0 SHEET 2 AA1 5 THR A 14 TYR A 20 -1 O VAL A 18 N PHE A 7 SHEET 3 AA1 5 TYR A 29 GLY A 31 -1 O TYR A 29 N PHE A 19 SHEET 4 AA1 5 LEU A 72 THR A 75 -1 O THR A 74 N VAL A 30 SHEET 5 AA1 5 THR A 54 LEU A 56 -1 N LYS A 55 O PHE A 73 SHEET 1 AA2 5 LEU B 5 VAL B 11 0 SHEET 2 AA2 5 THR B 14 TYR B 20 -1 O VAL B 18 N PHE B 7 SHEET 3 AA2 5 TYR B 29 GLY B 31 -1 O TYR B 29 N PHE B 19 SHEET 4 AA2 5 LEU B 72 THR B 75 -1 O THR B 74 N VAL B 30 SHEET 5 AA2 5 THR B 54 LEU B 56 -1 N LYS B 55 O PHE B 73 LINK C ALA A 0 N MSE A 1 1555 1555 1.34 LINK C MSE A 1 N SER A 2 1555 1555 1.33 LINK C ARG A 96 N MSE A 97 1555 1555 1.32 LINK C MSE A 97 N PHE A 98 1555 1555 1.32 LINK C AARG B 96 N AMSE B 97 1555 1555 1.31 LINK C BARG B 96 N BMSE B 97 1555 1555 1.33 LINK C AMSE B 97 N APHE B 98 1555 1555 1.34 LINK C BMSE B 97 N BPHE B 98 1555 1555 1.33 SITE 1 AC1 4 SER A 52 HOH A 333 ALA B 69 HOH B 208 CRYST1 59.565 61.212 75.283 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016788 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016337 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013283 0.00000