HEADER    IMMUNE SYSTEM                           27-FEB-15   4YHY              
TITLE     CRYSTAL STRUCTURE OF 309M3-B IN COMPLEX WITH TRIMETHYLATED LYS        
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: FAB LIGHT CHAIN;                                           
COMPND   3 CHAIN: C, L;                                                         
COMPND   4 ENGINEERED: YES;                                                     
COMPND   5 MOL_ID: 2;                                                           
COMPND   6 MOLECULE: FAB HEAVY CHAIN;                                           
COMPND   7 CHAIN: B, H;                                                         
COMPND   8 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_TAXID: 9606;                                                
SOURCE   4 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   5 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   6 EXPRESSION_SYSTEM_STRAIN: ATCC 55244;                                
SOURCE   7 MOL_ID: 2;                                                           
SOURCE   8 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   9 ORGANISM_TAXID: 9606;                                                
SOURCE  10 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE  11 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE  12 EXPRESSION_SYSTEM_STRAIN: ATCC 55244                                 
KEYWDS    ANTIBODY, FAB, TRIMETHYLATED LYS, IMMUNE SYSTEM                       
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    T.HATTORI,I.S.DEMENTIEVA,S.P.MONTANO,S.KOIDE                          
REVDAT   6   27-SEP-23 4YHY    1       REMARK                                   
REVDAT   5   11-DEC-19 4YHY    1       REMARK                                   
REVDAT   4   13-SEP-17 4YHY    1       JRNL   REMARK                            
REVDAT   3   02-MAR-16 4YHY    1       JRNL                                     
REVDAT   2   17-FEB-16 4YHY    1       JRNL                                     
REVDAT   1   10-FEB-16 4YHY    0                                                
JRNL        AUTH   T.HATTORI,D.LAI,I.S.DEMENTIEVA,S.P.MONTANO,K.KUROSAWA,       
JRNL        AUTH 2 Y.ZHENG,L.R.AKIN,K.M.SWIST-ROSOWSKA,A.T.GRZYBOWSKI,A.KOIDE,  
JRNL        AUTH 3 K.KRAJEWSKI,B.D.STRAHL,N.L.KELLEHER,A.J.RUTHENBURG,S.KOIDE   
JRNL        TITL   ANTIGEN CLASPING BY TWO ANTIGEN-BINDING SITES OF AN          
JRNL        TITL 2 EXCEPTIONALLY SPECIFIC ANTIBODY FOR HISTONE METHYLATION.     
JRNL        REF    PROC.NATL.ACAD.SCI.USA        V. 113  2092 2016              
JRNL        REFN                   ESSN 1091-6490                               
JRNL        PMID   26862167                                                     
JRNL        DOI    10.1073/PNAS.1522691113                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.90 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX 1.9_1692                                      
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 39.85                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.340                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 98.3                           
REMARK   3   NUMBER OF REFLECTIONS             : 79566                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.208                           
REMARK   3   R VALUE            (WORKING SET) : 0.206                           
REMARK   3   FREE R VALUE                     : 0.242                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.020                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 3995                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 39.8563 -  5.8329    0.99     2838   146  0.1939 0.2058        
REMARK   3     2  5.8329 -  4.6320    1.00     2746   137  0.1642 0.2083        
REMARK   3     3  4.6320 -  4.0471    1.00     2700   151  0.1569 0.1770        
REMARK   3     4  4.0471 -  3.6774    1.00     2658   161  0.1906 0.2051        
REMARK   3     5  3.6774 -  3.4140    1.00     2676   149  0.1962 0.2557        
REMARK   3     6  3.4140 -  3.2128    1.00     2668   138  0.2131 0.2625        
REMARK   3     7  3.2128 -  3.0519    1.00     2655   139  0.2216 0.2554        
REMARK   3     8  3.0519 -  2.9191    1.00     2664   136  0.2200 0.2573        
REMARK   3     9  2.9191 -  2.8068    1.00     2654   142  0.2159 0.2194        
REMARK   3    10  2.8068 -  2.7099    1.00     2628   145  0.2214 0.2857        
REMARK   3    11  2.7099 -  2.6252    1.00     2663   130  0.2123 0.2216        
REMARK   3    12  2.6252 -  2.5502    1.00     2613   162  0.2203 0.2554        
REMARK   3    13  2.5502 -  2.4831    1.00     2634   140  0.2222 0.2767        
REMARK   3    14  2.4831 -  2.4225    1.00     2623   137  0.2260 0.3078        
REMARK   3    15  2.4225 -  2.3674    1.00     2641   126  0.2163 0.2777        
REMARK   3    16  2.3674 -  2.3171    1.00     2638   140  0.2109 0.2458        
REMARK   3    17  2.3171 -  2.2707    1.00     2602   137  0.2142 0.2646        
REMARK   3    18  2.2707 -  2.2279    1.00     2617   135  0.2133 0.2428        
REMARK   3    19  2.2279 -  2.1881    0.99     2629   125  0.2138 0.2762        
REMARK   3    20  2.1881 -  2.1510    1.00     2618   148  0.2092 0.2701        
REMARK   3    21  2.1510 -  2.1163    1.00     2613   147  0.2195 0.2514        
REMARK   3    22  2.1163 -  2.0837    0.99     2571   143  0.2014 0.2442        
REMARK   3    23  2.0837 -  2.0531    0.99     2622   128  0.2191 0.2594        
REMARK   3    24  2.0531 -  2.0242    0.98     2593   124  0.2343 0.2794        
REMARK   3    25  2.0242 -  1.9968    0.97     2575   147  0.2419 0.2756        
REMARK   3    26  1.9968 -  1.9709    0.97     2518   135  0.2519 0.2990        
REMARK   3    27  1.9709 -  1.9463    0.96     2549   105  0.2752 0.2978        
REMARK   3    28  1.9463 -  1.9228    0.91     2353   110  0.2806 0.2886        
REMARK   3    29  1.9228 -  1.9005    0.77     2012   132  0.2869 0.3084        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.210            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.510           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.007           6686                                  
REMARK   3   ANGLE     :  1.061           9108                                  
REMARK   3   CHIRALITY :  0.041           1026                                  
REMARK   3   PLANARITY :  0.005           1172                                  
REMARK   3   DIHEDRAL  : 12.613           2360                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 4YHY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAR-15.                  
REMARK 100 THE DEPOSITION ID IS D_1000207481.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 20-MAR-13                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 7.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 19-ID                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.978                              
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315R                  
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-3000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-3000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 79791                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.900                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 98.6                               
REMARK 200  DATA REDUNDANCY                : 7.200                              
REMARK 200  R MERGE                    (I) : 0.08900                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 25.4000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.93                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 84.8                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 5.50                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.58700                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.500                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: MOLREP                                                
REMARK 200 STARTING MODEL: 2R8S, 2DD8, 1MHP                                     
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 55.38                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG 3350, 10% TACSIMATE (PH7.0),     
REMARK 280  10 MM EDTA, 1% MPD, 10 MM SARCOSINE, VAPOR DIFFUSION, HANGING       
REMARK 280  DROP, TEMPERATURE 292K                                              
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       37.48950            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       67.64350            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       50.17100            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       67.64350            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       37.48950            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       50.17100            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2                                                    
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 3330 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 19520 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 3380 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 19550 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     SER C     1                                                      
REMARK 465     TYR C     2                                                      
REMARK 465     VAL C     3                                                      
REMARK 465     GLU C   214                                                      
REMARK 465     CYS C   215                                                      
REMARK 465     SER B   136                                                      
REMARK 465     LYS B   137                                                      
REMARK 465     SER B   138                                                      
REMARK 465     LYS B   222                                                      
REMARK 465     SER B   223                                                      
REMARK 465     CYS B   224                                                      
REMARK 465     ASP B   225                                                      
REMARK 465     LYS B   226                                                      
REMARK 465     THR B   227                                                      
REMARK 465     HIS B   228                                                      
REMARK 465     THR B   229                                                      
REMARK 465     SER H   136                                                      
REMARK 465     LYS H   137                                                      
REMARK 465     SER H   138                                                      
REMARK 465     LYS H   222                                                      
REMARK 465     SER H   223                                                      
REMARK 465     CYS H   224                                                      
REMARK 465     ASP H   225                                                      
REMARK 465     LYS H   226                                                      
REMARK 465     THR H   227                                                      
REMARK 465     HIS H   228                                                      
REMARK 465     THR H   229                                                      
REMARK 465     SER L     1                                                      
REMARK 465     TYR L     2                                                      
REMARK 465     VAL L     3                                                      
REMARK 465     GLU L   214                                                      
REMARK 465     CYS L   215                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASP C  50      -48.48     71.34                                   
REMARK 500    ALA C  83      178.21    175.38                                   
REMARK 500    ASP B 152       65.19     65.02                                   
REMARK 500    SER B 164       19.69     59.98                                   
REMARK 500    ASP H 152       62.09     65.54                                   
REMARK 500    ASP L  50      -48.15     73.22                                   
REMARK 500    ALA L  83      178.66    179.81                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue M3L B 301                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue M3L H 301                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 4YHP   RELATED DB: PDB                                   
REMARK 900 4HYP CONTAINS THE SAME FAB ANTIBODY COMPLEXED WITH PEPTIDE.          
REMARK 900 RELATED ID: 4YHZ   RELATED DB: PDB                                   
DBREF  4YHY C    1   215  PDB    4YHY     4YHY             1    215             
DBREF  4YHY B    1   229  PDB    4YHY     4YHY             1    229             
DBREF  4YHY H    1   229  PDB    4YHY     4YHY             1    229             
DBREF  4YHY L    1   215  PDB    4YHY     4YHY             1    215             
SEQRES   1 C  215  SER TYR VAL LEU THR GLN PRO PRO SER VAL SER VAL ALA          
SEQRES   2 C  215  PRO GLY GLN THR ALA ARG ILE THR CYS GLY GLY THR ASN          
SEQRES   3 C  215  ILE GLY ASP ILE SER VAL HIS TRP TYR GLN GLN ARG PRO          
SEQRES   4 C  215  GLY GLN ALA PRO LEU VAL VAL VAL TYR ASP ASP SER ASP          
SEQRES   5 C  215  ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER ASN          
SEQRES   6 C  215  SER GLY ASN THR ALA THR LEU THR ILE SER ARG VAL GLU          
SEQRES   7 C  215  ALA GLY ASP GLU ALA ASP TYR TYR CYS GLN VAL TRP ASP          
SEQRES   8 C  215  ASP SER ILE ASN ALA TYR VAL PHE GLY THR GLY THR LYS          
SEQRES   9 C  215  VAL THR VAL LEU ARG THR VAL ALA ALA PRO SER VAL PHE          
SEQRES  10 C  215  ILE PHE PRO PRO SER ASP SER GLN LEU LYS SER GLY THR          
SEQRES  11 C  215  ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG          
SEQRES  12 C  215  GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN          
SEQRES  13 C  215  SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER          
SEQRES  14 C  215  LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU          
SEQRES  15 C  215  SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS          
SEQRES  16 C  215  GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS          
SEQRES  17 C  215  SER PHE ASN ARG GLY GLU CYS                                  
SEQRES   1 B  229  GLU VAL GLN LEU VAL GLU THR GLY GLY GLY VAL VAL GLN          
SEQRES   2 B  229  PRO GLY ARG SER LEU ARG LEU SER CYS THR ALA SER GLY          
SEQRES   3 B  229  PHE THR PHE ARG ASP TYR TRP MET SER TRP VAL ARG GLN          
SEQRES   4 B  229  ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA ASP ILE ASN          
SEQRES   5 B  229  PRO ASP GLY ILE THR ARG TYR TYR ILE ASP ALA VAL LYS          
SEQRES   6 B  229  GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS SER SER          
SEQRES   7 B  229  LEU TYR LEU GLN MET ASN SER LEU GLY ALA GLU ASP THR          
SEQRES   8 B  229  ALA VAL TYR TYR CYS ALA ARG GLU PHE HIS SER GLY LEU          
SEQRES   9 B  229  GLY TRP HIS PHE ASP LEU TRP GLY ARG GLY THR LEU VAL          
SEQRES  10 B  229  THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE          
SEQRES  11 B  229  PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR          
SEQRES  12 B  229  ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU          
SEQRES  13 B  229  PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER          
SEQRES  14 B  229  GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY          
SEQRES  15 B  229  LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER          
SEQRES  16 B  229  SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS          
SEQRES  17 B  229  LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO          
SEQRES  18 B  229  LYS SER CYS ASP LYS THR HIS THR                              
SEQRES   1 H  229  GLU VAL GLN LEU VAL GLU THR GLY GLY GLY VAL VAL GLN          
SEQRES   2 H  229  PRO GLY ARG SER LEU ARG LEU SER CYS THR ALA SER GLY          
SEQRES   3 H  229  PHE THR PHE ARG ASP TYR TRP MET SER TRP VAL ARG GLN          
SEQRES   4 H  229  ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA ASP ILE ASN          
SEQRES   5 H  229  PRO ASP GLY ILE THR ARG TYR TYR ILE ASP ALA VAL LYS          
SEQRES   6 H  229  GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS SER SER          
SEQRES   7 H  229  LEU TYR LEU GLN MET ASN SER LEU GLY ALA GLU ASP THR          
SEQRES   8 H  229  ALA VAL TYR TYR CYS ALA ARG GLU PHE HIS SER GLY LEU          
SEQRES   9 H  229  GLY TRP HIS PHE ASP LEU TRP GLY ARG GLY THR LEU VAL          
SEQRES  10 H  229  THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE          
SEQRES  11 H  229  PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR          
SEQRES  12 H  229  ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU          
SEQRES  13 H  229  PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER          
SEQRES  14 H  229  GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY          
SEQRES  15 H  229  LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER          
SEQRES  16 H  229  SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS          
SEQRES  17 H  229  LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO          
SEQRES  18 H  229  LYS SER CYS ASP LYS THR HIS THR                              
SEQRES   1 L  215  SER TYR VAL LEU THR GLN PRO PRO SER VAL SER VAL ALA          
SEQRES   2 L  215  PRO GLY GLN THR ALA ARG ILE THR CYS GLY GLY THR ASN          
SEQRES   3 L  215  ILE GLY ASP ILE SER VAL HIS TRP TYR GLN GLN ARG PRO          
SEQRES   4 L  215  GLY GLN ALA PRO LEU VAL VAL VAL TYR ASP ASP SER ASP          
SEQRES   5 L  215  ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER ASN          
SEQRES   6 L  215  SER GLY ASN THR ALA THR LEU THR ILE SER ARG VAL GLU          
SEQRES   7 L  215  ALA GLY ASP GLU ALA ASP TYR TYR CYS GLN VAL TRP ASP          
SEQRES   8 L  215  ASP SER ILE ASN ALA TYR VAL PHE GLY THR GLY THR LYS          
SEQRES   9 L  215  VAL THR VAL LEU ARG THR VAL ALA ALA PRO SER VAL PHE          
SEQRES  10 L  215  ILE PHE PRO PRO SER ASP SER GLN LEU LYS SER GLY THR          
SEQRES  11 L  215  ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG          
SEQRES  12 L  215  GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN          
SEQRES  13 L  215  SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER          
SEQRES  14 L  215  LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU          
SEQRES  15 L  215  SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS          
SEQRES  16 L  215  GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS          
SEQRES  17 L  215  SER PHE ASN ARG GLY GLU CYS                                  
HET    M3L  B 301      13                                                       
HET    M3L  H 301      13                                                       
HETNAM     M3L N-TRIMETHYLLYSINE                                                
FORMUL   5  M3L    2(C9 H21 N2 O2 1+)                                           
FORMUL   7  HOH   *604(H2 O)                                                    
HELIX    1 AA1 ASN C   26  ILE C   30  5                                   5    
HELIX    2 AA2 GLU C   78  GLU C   82  5                                   5    
HELIX    3 AA3 SER C  122  SER C  128  1                                   7    
HELIX    4 AA4 LYS C  184  GLU C  188  1                                   5    
HELIX    5 AA5 THR B   28  TYR B   32  5                                   5    
HELIX    6 AA6 ASP B   62  LYS B   65  5                                   4    
HELIX    7 AA7 GLY B   87  THR B   91  5                                   5    
HELIX    8 AA8 SER B  164  ALA B  166  5                                   3    
HELIX    9 AA9 SER B  195  LEU B  197  5                                   3    
HELIX   10 AB1 LYS B  209  ASN B  212  5                                   4    
HELIX   11 AB2 THR H   28  TYR H   32  5                                   5    
HELIX   12 AB3 ASP H   62  LYS H   65  5                                   4    
HELIX   13 AB4 ASN H   74  LYS H   76  5                                   3    
HELIX   14 AB5 GLY H   87  THR H   91  5                                   5    
HELIX   15 AB6 SER H  164  ALA H  166  5                                   3    
HELIX   16 AB7 SER H  195  LEU H  197  5                                   3    
HELIX   17 AB8 LYS H  209  ASN H  212  5                                   4    
HELIX   18 AB9 ASN L   26  ILE L   30  5                                   5    
HELIX   19 AC1 GLU L   78  GLU L   82  5                                   5    
HELIX   20 AC2 SER L  122  GLY L  129  1                                   8    
HELIX   21 AC3 LYS L  184  GLU L  188  1                                   5    
SHEET    1 AA1 5 SER C   9  VAL C  12  0                                        
SHEET    2 AA1 5 THR C 103  VAL C 107  1  O  THR C 106   N  VAL C  10           
SHEET    3 AA1 5 ALA C  83  ASP C  91 -1  N  ALA C  83   O  VAL C 105           
SHEET    4 AA1 5 HIS C  33  GLN C  37 -1  N  GLN C  37   O  ASP C  84           
SHEET    5 AA1 5 LEU C  44  VAL C  47 -1  O  LEU C  44   N  GLN C  36           
SHEET    1 AA2 4 SER C   9  VAL C  12  0                                        
SHEET    2 AA2 4 THR C 103  VAL C 107  1  O  THR C 106   N  VAL C  10           
SHEET    3 AA2 4 ALA C  83  ASP C  91 -1  N  ALA C  83   O  VAL C 105           
SHEET    4 AA2 4 ALA C  96  PHE C  99 -1  O  ALA C  96   N  ASP C  91           
SHEET    1 AA3 3 ALA C  18  GLY C  23  0                                        
SHEET    2 AA3 3 THR C  69  ILE C  74 -1  O  LEU C  72   N  ILE C  20           
SHEET    3 AA3 3 PHE C  61  SER C  66 -1  N  SER C  62   O  THR C  73           
SHEET    1 AA4 4 SER C 115  PHE C 119  0                                        
SHEET    2 AA4 4 THR C 130  PHE C 140 -1  O  LEU C 136   N  PHE C 117           
SHEET    3 AA4 4 TYR C 174  SER C 183 -1  O  SER C 178   N  CYS C 135           
SHEET    4 AA4 4 SER C 160  VAL C 164 -1  N  SER C 163   O  SER C 177           
SHEET    1 AA5 4 ALA C 154  LEU C 155  0                                        
SHEET    2 AA5 4 LYS C 146  VAL C 151 -1  N  VAL C 151   O  ALA C 154           
SHEET    3 AA5 4 VAL C 192  THR C 198 -1  O  GLU C 196   N  GLN C 148           
SHEET    4 AA5 4 VAL C 206  ASN C 211 -1  O  VAL C 206   N  VAL C 197           
SHEET    1 AA6 4 GLN B   3  THR B   7  0                                        
SHEET    2 AA6 4 LEU B  18  SER B  25 -1  O  SER B  21   N  THR B   7           
SHEET    3 AA6 4 SER B  78  MET B  83 -1  O  MET B  83   N  LEU B  18           
SHEET    4 AA6 4 PHE B  68  ASP B  73 -1  N  THR B  69   O  GLN B  82           
SHEET    1 AA7 6 GLY B  10  VAL B  12  0                                        
SHEET    2 AA7 6 THR B 115  VAL B 119  1  O  THR B 118   N  GLY B  10           
SHEET    3 AA7 6 ALA B  92  SER B 102 -1  N  TYR B  94   O  THR B 115           
SHEET    4 AA7 6 MET B  34  GLN B  39 -1  N  VAL B  37   O  TYR B  95           
SHEET    5 AA7 6 LEU B  45  ILE B  51 -1  O  GLU B  46   N  ARG B  38           
SHEET    6 AA7 6 ARG B  58  TYR B  60 -1  O  TYR B  59   N  ASP B  50           
SHEET    1 AA8 4 GLY B  10  VAL B  12  0                                        
SHEET    2 AA8 4 THR B 115  VAL B 119  1  O  THR B 118   N  GLY B  10           
SHEET    3 AA8 4 ALA B  92  SER B 102 -1  N  TYR B  94   O  THR B 115           
SHEET    4 AA8 4 GLY B 105  TRP B 111 -1  O  HIS B 107   N  PHE B 100           
SHEET    1 AA9 4 SER B 128  LEU B 132  0                                        
SHEET    2 AA9 4 THR B 143  TYR B 153 -1  O  LEU B 149   N  PHE B 130           
SHEET    3 AA9 4 TYR B 184  PRO B 193 -1  O  TYR B 184   N  TYR B 153           
SHEET    4 AA9 4 VAL B 171  THR B 173 -1  N  HIS B 172   O  VAL B 189           
SHEET    1 AB1 4 SER B 128  LEU B 132  0                                        
SHEET    2 AB1 4 THR B 143  TYR B 153 -1  O  LEU B 149   N  PHE B 130           
SHEET    3 AB1 4 TYR B 184  PRO B 193 -1  O  TYR B 184   N  TYR B 153           
SHEET    4 AB1 4 VAL B 177  LEU B 178 -1  N  VAL B 177   O  SER B 185           
SHEET    1 AB2 3 THR B 159  TRP B 162  0                                        
SHEET    2 AB2 3 ILE B 203  HIS B 208 -1  O  ASN B 205   N  SER B 161           
SHEET    3 AB2 3 THR B 213  LYS B 218 -1  O  VAL B 215   N  VAL B 206           
SHEET    1 AB3 4 GLN H   3  THR H   7  0                                        
SHEET    2 AB3 4 LEU H  18  SER H  25 -1  O  SER H  21   N  THR H   7           
SHEET    3 AB3 4 SER H  78  MET H  83 -1  O  MET H  83   N  LEU H  18           
SHEET    4 AB3 4 PHE H  68  ASP H  73 -1  N  THR H  69   O  GLN H  82           
SHEET    1 AB4 6 GLY H  10  VAL H  12  0                                        
SHEET    2 AB4 6 THR H 115  VAL H 119  1  O  THR H 118   N  GLY H  10           
SHEET    3 AB4 6 ALA H  92  SER H 102 -1  N  ALA H  92   O  VAL H 117           
SHEET    4 AB4 6 MET H  34  GLN H  39 -1  N  VAL H  37   O  TYR H  95           
SHEET    5 AB4 6 LEU H  45  ILE H  51 -1  O  GLU H  46   N  ARG H  38           
SHEET    6 AB4 6 ARG H  58  TYR H  60 -1  O  TYR H  59   N  ASP H  50           
SHEET    1 AB5 4 GLY H  10  VAL H  12  0                                        
SHEET    2 AB5 4 THR H 115  VAL H 119  1  O  THR H 118   N  GLY H  10           
SHEET    3 AB5 4 ALA H  92  SER H 102 -1  N  ALA H  92   O  VAL H 117           
SHEET    4 AB5 4 GLY H 105  TRP H 111 -1  O  HIS H 107   N  PHE H 100           
SHEET    1 AB6 4 SER H 128  LEU H 132  0                                        
SHEET    2 AB6 4 THR H 143  TYR H 153 -1  O  LEU H 149   N  PHE H 130           
SHEET    3 AB6 4 TYR H 184  PRO H 193 -1  O  TYR H 184   N  TYR H 153           
SHEET    4 AB6 4 VAL H 171  THR H 173 -1  N  HIS H 172   O  VAL H 189           
SHEET    1 AB7 4 SER H 128  LEU H 132  0                                        
SHEET    2 AB7 4 THR H 143  TYR H 153 -1  O  LEU H 149   N  PHE H 130           
SHEET    3 AB7 4 TYR H 184  PRO H 193 -1  O  TYR H 184   N  TYR H 153           
SHEET    4 AB7 4 VAL H 177  LEU H 178 -1  N  VAL H 177   O  SER H 185           
SHEET    1 AB8 3 THR H 159  TRP H 162  0                                        
SHEET    2 AB8 3 ILE H 203  HIS H 208 -1  O  ASN H 205   N  SER H 161           
SHEET    3 AB8 3 THR H 213  LYS H 218 -1  O  THR H 213   N  HIS H 208           
SHEET    1 AB9 5 SER L   9  VAL L  12  0                                        
SHEET    2 AB9 5 THR L 103  VAL L 107  1  O  THR L 106   N  VAL L  10           
SHEET    3 AB9 5 ALA L  83  ASP L  91 -1  N  ALA L  83   O  VAL L 105           
SHEET    4 AB9 5 HIS L  33  GLN L  37 -1  N  GLN L  37   O  ASP L  84           
SHEET    5 AB9 5 LEU L  44  VAL L  47 -1  O  VAL L  46   N  TRP L  34           
SHEET    1 AC1 4 SER L   9  VAL L  12  0                                        
SHEET    2 AC1 4 THR L 103  VAL L 107  1  O  THR L 106   N  VAL L  10           
SHEET    3 AC1 4 ALA L  83  ASP L  91 -1  N  ALA L  83   O  VAL L 105           
SHEET    4 AC1 4 ALA L  96  PHE L  99 -1  O  ALA L  96   N  ASP L  91           
SHEET    1 AC2 3 ALA L  18  GLY L  23  0                                        
SHEET    2 AC2 3 THR L  69  ILE L  74 -1  O  LEU L  72   N  ILE L  20           
SHEET    3 AC2 3 PHE L  61  SER L  66 -1  N  SER L  62   O  THR L  73           
SHEET    1 AC3 4 SER L 115  PHE L 119  0                                        
SHEET    2 AC3 4 THR L 130  PHE L 140 -1  O  LEU L 136   N  PHE L 117           
SHEET    3 AC3 4 TYR L 174  SER L 183 -1  O  LEU L 182   N  ALA L 131           
SHEET    4 AC3 4 SER L 160  VAL L 164 -1  N  GLN L 161   O  THR L 179           
SHEET    1 AC4 4 ALA L 154  LEU L 155  0                                        
SHEET    2 AC4 4 LYS L 146  VAL L 151 -1  N  VAL L 151   O  ALA L 154           
SHEET    3 AC4 4 VAL L 192  THR L 198 -1  O  GLU L 196   N  GLN L 148           
SHEET    4 AC4 4 VAL L 206  ASN L 211 -1  O  VAL L 206   N  VAL L 197           
SSBOND   1 CYS C   22    CYS C   87                          1555   1555  2.06  
SSBOND   2 CYS C  135    CYS C  195                          1555   1555  2.02  
SSBOND   3 CYS B   22    CYS B   96                          1555   1555  2.07  
SSBOND   4 CYS B  148    CYS B  204                          1555   1555  2.05  
SSBOND   5 CYS H   22    CYS H   96                          1555   1555  2.07  
SSBOND   6 CYS H  148    CYS H  204                          1555   1555  2.04  
SSBOND   7 CYS L   22    CYS L   87                          1555   1555  2.06  
SSBOND   8 CYS L  135    CYS L  195                          1555   1555  2.06  
CISPEP   1 TYR C  141    PRO C  142          0         2.90                     
CISPEP   2 PHE B  154    PRO B  155          0        -3.68                     
CISPEP   3 GLU B  156    PRO B  157          0        -2.45                     
CISPEP   4 PHE H  154    PRO H  155          0        -2.79                     
CISPEP   5 GLU H  156    PRO H  157          0         0.09                     
CISPEP   6 TYR L  141    PRO L  142          0         2.42                     
SITE     1 AC1 10 TRP B  33  ASP B  50  GLU B  99  TRP B 106                    
SITE     2 AC1 10 HOH B 401  HOH B 481  TRP C  90  TYR C  97                    
SITE     3 AC1 10 GLY H 142  HOH H 497                                          
SITE     1 AC2 10 GLY B 142  SER B 194  HOH B 517  TRP H  33                    
SITE     2 AC2 10 ASP H  50  GLU H  99  TRP H 106  HOH H 466                    
SITE     3 AC2 10 TRP L  90  TYR L  97                                          
CRYST1   74.979  100.342  135.287  90.00  90.00  90.00 P 21 21 21    8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.013337  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.009966  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.007392        0.00000