HEADER PROTEIN BINDING 03-MAR-15 4YJX TITLE THE STRUCTURE OF AGROBACTERIUM TUMEFACIENS CLPS2 BOUND TO L- TITLE 2 PHENYLALANINAMIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS 2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM FABRUM (STRAIN C58 / ATCC 33970); SOURCE 3 ORGANISM_TAXID: 176299; SOURCE 4 STRAIN: C58 / ATCC 33970; SOURCE 5 GENE: CLPS2, ATU2232, AGR_C_4060; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET23B KEYWDS N-END RULE, PROTEASE ADAPTOR, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR B.STEIN,R.A.GRANT,R.T.SAUER,T.A.BAKER REVDAT 7 27-SEP-23 4YJX 1 REMARK REVDAT 6 20-NOV-19 4YJX 1 REMARK REVDAT 5 20-SEP-17 4YJX 1 REMARK REVDAT 4 28-DEC-16 4YJX 1 TITLE REVDAT 3 10-FEB-16 4YJX 1 JRNL REVDAT 2 03-FEB-16 4YJX 1 JRNL REVDAT 1 27-JAN-16 4YJX 0 JRNL AUTH B.J.STEIN,R.A.GRANT,R.T.SAUER,T.A.BAKER JRNL TITL STRUCTURAL BASIS OF AN N-DEGRON ADAPTOR WITH MORE STRINGENT JRNL TITL 2 SPECIFICITY. JRNL REF STRUCTURE V. 24 232 2016 JRNL REFN ISSN 0969-2126 JRNL PMID 26805523 JRNL DOI 10.1016/J.STR.2015.12.008 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 17257 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.750 REMARK 3 FREE R VALUE TEST SET COUNT : 819 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.8674 - 4.6245 1.00 2905 122 0.1750 0.1986 REMARK 3 2 4.6245 - 3.6720 1.00 2760 126 0.1417 0.1713 REMARK 3 3 3.6720 - 3.2083 1.00 2739 122 0.1789 0.2295 REMARK 3 4 3.2083 - 2.9151 1.00 2680 160 0.1979 0.2291 REMARK 3 5 2.9151 - 2.7063 1.00 2669 156 0.2063 0.3056 REMARK 3 6 2.7063 - 2.5468 1.00 2685 133 0.2113 0.2238 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2749 REMARK 3 ANGLE : 0.813 3698 REMARK 3 CHIRALITY : 0.028 421 REMARK 3 PLANARITY : 0.003 470 REMARK 3 DIHEDRAL : 11.511 1036 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -20.6773 11.7901 0.1429 REMARK 3 T TENSOR REMARK 3 T11: 0.2330 T22: 0.2937 REMARK 3 T33: 0.2175 T12: -0.0247 REMARK 3 T13: 0.0136 T23: 0.0263 REMARK 3 L TENSOR REMARK 3 L11: 2.8140 L22: 4.9331 REMARK 3 L33: 2.5107 L12: -0.5077 REMARK 3 L13: -0.4349 L23: 0.1380 REMARK 3 S TENSOR REMARK 3 S11: 0.0055 S12: -0.0916 S13: -0.0374 REMARK 3 S21: -0.2008 S22: 0.0110 S23: 0.2302 REMARK 3 S31: 0.0964 S32: -0.1895 S33: -0.0072 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -3.1572 16.6566 -8.8259 REMARK 3 T TENSOR REMARK 3 T11: 0.1886 T22: 0.2238 REMARK 3 T33: 0.2349 T12: 0.0144 REMARK 3 T13: -0.0006 T23: 0.0122 REMARK 3 L TENSOR REMARK 3 L11: 3.3270 L22: 3.3282 REMARK 3 L33: 4.1023 L12: 0.9168 REMARK 3 L13: 0.1440 L23: 2.2182 REMARK 3 S TENSOR REMARK 3 S11: -0.0139 S12: -0.0502 S13: 0.0027 REMARK 3 S21: 0.1537 S22: 0.1223 S23: -0.1912 REMARK 3 S31: 0.1296 S32: 0.2947 S33: -0.1058 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): -7.9417 -2.0775 -26.7789 REMARK 3 T TENSOR REMARK 3 T11: 0.2786 T22: 0.2440 REMARK 3 T33: 0.2482 T12: 0.0051 REMARK 3 T13: -0.0027 T23: -0.0430 REMARK 3 L TENSOR REMARK 3 L11: 3.2049 L22: 4.7009 REMARK 3 L33: 3.7886 L12: -0.5024 REMARK 3 L13: 0.5358 L23: 0.0894 REMARK 3 S TENSOR REMARK 3 S11: -0.0787 S12: -0.1516 S13: -0.0496 REMARK 3 S21: 0.1871 S22: 0.1353 S23: 0.0039 REMARK 3 S31: 0.0905 S32: -0.0865 S33: -0.0312 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): -2.9249 26.0443 -28.9590 REMARK 3 T TENSOR REMARK 3 T11: 0.3855 T22: 0.2873 REMARK 3 T33: 0.2473 T12: -0.0135 REMARK 3 T13: -0.0113 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 3.9280 L22: 5.8700 REMARK 3 L33: 4.0256 L12: 2.1464 REMARK 3 L13: -0.2111 L23: 0.1427 REMARK 3 S TENSOR REMARK 3 S11: -0.1115 S12: 0.4033 S13: 0.2693 REMARK 3 S21: -0.6987 S22: 0.1723 S23: 0.1409 REMARK 3 S31: -0.1877 S32: 0.0590 S33: -0.0576 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YJX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000207581. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : OTHER REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17257 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.547 REMARK 200 RESOLUTION RANGE LOW (A) : 33.864 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09800 REMARK 200 FOR THE DATA SET : 19.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.50100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.080 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4YJM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.2M AMMONIUM SULFATE 0.2M SODIUM REMARK 280 FORMATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.01650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.12950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.49850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.12950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.01650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.49850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 SER A 4 REMARK 465 PRO A 5 REMARK 465 VAL A 6 REMARK 465 ASP A 7 REMARK 465 LEU A 8 REMARK 465 LYS A 9 REMARK 465 PRO A 10 REMARK 465 LYS A 11 REMARK 465 PRO A 12 REMARK 465 LYS A 13 REMARK 465 VAL A 14 REMARK 465 LYS A 15 REMARK 465 PRO A 16 REMARK 465 LYS A 17 REMARK 465 LEU A 18 REMARK 465 GLU A 19 REMARK 465 GLU A 103 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASP B 3 REMARK 465 SER B 4 REMARK 465 PRO B 5 REMARK 465 VAL B 6 REMARK 465 ASP B 7 REMARK 465 LEU B 8 REMARK 465 LYS B 9 REMARK 465 PRO B 10 REMARK 465 LYS B 11 REMARK 465 PRO B 12 REMARK 465 LYS B 13 REMARK 465 VAL B 14 REMARK 465 LYS B 15 REMARK 465 PRO B 16 REMARK 465 LYS B 17 REMARK 465 LEU B 18 REMARK 465 GLU B 19 REMARK 465 GLU B 103 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 ASP C 3 REMARK 465 SER C 4 REMARK 465 PRO C 5 REMARK 465 VAL C 6 REMARK 465 ASP C 7 REMARK 465 LEU C 8 REMARK 465 LYS C 9 REMARK 465 PRO C 10 REMARK 465 LYS C 11 REMARK 465 PRO C 12 REMARK 465 LYS C 13 REMARK 465 VAL C 14 REMARK 465 LYS C 15 REMARK 465 PRO C 16 REMARK 465 LYS C 17 REMARK 465 LEU C 18 REMARK 465 GLU C 19 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 ASP D 3 REMARK 465 SER D 4 REMARK 465 PRO D 5 REMARK 465 VAL D 6 REMARK 465 ASP D 7 REMARK 465 LEU D 8 REMARK 465 LYS D 9 REMARK 465 PRO D 10 REMARK 465 LYS D 11 REMARK 465 PRO D 12 REMARK 465 LYS D 13 REMARK 465 VAL D 14 REMARK 465 LYS D 15 REMARK 465 PRO D 16 REMARK 465 LYS D 17 REMARK 465 LEU D 18 REMARK 465 GLU D 19 REMARK 465 GLU D 103 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NFA A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NFA B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NFA C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NFA D 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4YJM RELATED DB: PDB REMARK 900 4YJM CONTAINS THE SAME PROTEIN WITHOUT LIGAND BOUND REMARK 900 RELATED ID: 4YKA RELATED DB: PDB DBREF 4YJX A 1 103 UNP Q8UD95 CLPS2_AGRFC 1 103 DBREF 4YJX B 1 103 UNP Q8UD95 CLPS2_AGRFC 1 103 DBREF 4YJX C 1 103 UNP Q8UD95 CLPS2_AGRFC 1 103 DBREF 4YJX D 1 103 UNP Q8UD95 CLPS2_AGRFC 1 103 SEQRES 1 A 103 MET SER ASP SER PRO VAL ASP LEU LYS PRO LYS PRO LYS SEQRES 2 A 103 VAL LYS PRO LYS LEU GLU ARG PRO LYS LEU TYR LYS VAL SEQRES 3 A 103 MET LEU LEU ASN ASP ASP TYR THR PRO ARG GLU PHE VAL SEQRES 4 A 103 THR VAL VAL LEU LYS ALA VAL PHE ARG MET SER GLU ASP SEQRES 5 A 103 THR GLY ARG ARG VAL MET MET THR ALA HIS ARG PHE GLY SEQRES 6 A 103 SER ALA VAL VAL VAL VAL CYS GLU ARG ASP ILE ALA GLU SEQRES 7 A 103 THR LYS ALA LYS GLU ALA THR ASP LEU GLY LYS GLU ALA SEQRES 8 A 103 GLY PHE PRO LEU MET PHE THR THR GLU PRO GLU GLU SEQRES 1 B 103 MET SER ASP SER PRO VAL ASP LEU LYS PRO LYS PRO LYS SEQRES 2 B 103 VAL LYS PRO LYS LEU GLU ARG PRO LYS LEU TYR LYS VAL SEQRES 3 B 103 MET LEU LEU ASN ASP ASP TYR THR PRO ARG GLU PHE VAL SEQRES 4 B 103 THR VAL VAL LEU LYS ALA VAL PHE ARG MET SER GLU ASP SEQRES 5 B 103 THR GLY ARG ARG VAL MET MET THR ALA HIS ARG PHE GLY SEQRES 6 B 103 SER ALA VAL VAL VAL VAL CYS GLU ARG ASP ILE ALA GLU SEQRES 7 B 103 THR LYS ALA LYS GLU ALA THR ASP LEU GLY LYS GLU ALA SEQRES 8 B 103 GLY PHE PRO LEU MET PHE THR THR GLU PRO GLU GLU SEQRES 1 C 103 MET SER ASP SER PRO VAL ASP LEU LYS PRO LYS PRO LYS SEQRES 2 C 103 VAL LYS PRO LYS LEU GLU ARG PRO LYS LEU TYR LYS VAL SEQRES 3 C 103 MET LEU LEU ASN ASP ASP TYR THR PRO ARG GLU PHE VAL SEQRES 4 C 103 THR VAL VAL LEU LYS ALA VAL PHE ARG MET SER GLU ASP SEQRES 5 C 103 THR GLY ARG ARG VAL MET MET THR ALA HIS ARG PHE GLY SEQRES 6 C 103 SER ALA VAL VAL VAL VAL CYS GLU ARG ASP ILE ALA GLU SEQRES 7 C 103 THR LYS ALA LYS GLU ALA THR ASP LEU GLY LYS GLU ALA SEQRES 8 C 103 GLY PHE PRO LEU MET PHE THR THR GLU PRO GLU GLU SEQRES 1 D 103 MET SER ASP SER PRO VAL ASP LEU LYS PRO LYS PRO LYS SEQRES 2 D 103 VAL LYS PRO LYS LEU GLU ARG PRO LYS LEU TYR LYS VAL SEQRES 3 D 103 MET LEU LEU ASN ASP ASP TYR THR PRO ARG GLU PHE VAL SEQRES 4 D 103 THR VAL VAL LEU LYS ALA VAL PHE ARG MET SER GLU ASP SEQRES 5 D 103 THR GLY ARG ARG VAL MET MET THR ALA HIS ARG PHE GLY SEQRES 6 D 103 SER ALA VAL VAL VAL VAL CYS GLU ARG ASP ILE ALA GLU SEQRES 7 D 103 THR LYS ALA LYS GLU ALA THR ASP LEU GLY LYS GLU ALA SEQRES 8 D 103 GLY PHE PRO LEU MET PHE THR THR GLU PRO GLU GLU HET SO4 A 201 5 HET NFA A 202 25 HET NFA B 201 25 HET SO4 C 201 5 HET SO4 C 202 5 HET NFA C 203 25 HET NFA D 201 25 HETNAM SO4 SULFATE ION HETNAM NFA PHENYLALANINE AMIDE FORMUL 5 SO4 3(O4 S 2-) FORMUL 6 NFA 4(C9 H12 N2 O) FORMUL 12 HOH *63(H2 O) HELIX 1 AA1 PRO A 35 ARG A 48 1 14 HELIX 2 AA2 SER A 50 GLY A 65 1 16 HELIX 3 AA3 ARG A 74 GLU A 90 1 17 HELIX 4 AA4 PRO B 35 ARG B 48 1 14 HELIX 5 AA5 SER B 50 GLY B 65 1 16 HELIX 6 AA6 ARG B 74 GLU B 90 1 17 HELIX 7 AA7 PRO C 35 ARG C 48 1 14 HELIX 8 AA8 SER C 50 GLY C 65 1 16 HELIX 9 AA9 ARG C 74 ALA C 91 1 18 HELIX 10 AB1 PRO D 35 ARG D 48 1 14 HELIX 11 AB2 SER D 50 GLY D 65 1 16 HELIX 12 AB3 ARG D 74 ALA D 91 1 18 SHEET 1 AA1 3 SER A 66 GLU A 73 0 SHEET 2 AA1 3 LEU A 23 LEU A 29 -1 N VAL A 26 O VAL A 69 SHEET 3 AA1 3 MET A 96 PRO A 101 -1 O GLU A 100 N LYS A 25 SHEET 1 AA2 3 SER B 66 GLU B 73 0 SHEET 2 AA2 3 LEU B 23 LEU B 29 -1 N TYR B 24 O CYS B 72 SHEET 3 AA2 3 MET B 96 PRO B 101 -1 O THR B 98 N MET B 27 SHEET 1 AA3 3 SER C 66 GLU C 73 0 SHEET 2 AA3 3 LEU C 23 LEU C 29 -1 N VAL C 26 O VAL C 69 SHEET 3 AA3 3 MET C 96 PRO C 101 -1 O GLU C 100 N LYS C 25 SHEET 1 AA4 3 SER D 66 GLU D 73 0 SHEET 2 AA4 3 LEU D 23 LEU D 29 -1 N TYR D 24 O CYS D 72 SHEET 3 AA4 3 MET D 96 PRO D 101 -1 O THR D 98 N MET D 27 SITE 1 AC1 4 ARG A 48 ARG B 48 LYS B 80 ARG D 48 SITE 1 AC2 8 LEU A 29 ASN A 30 ASP A 31 THR A 34 SITE 2 AC2 8 ARG A 36 MET A 58 HIS A 62 HOH A 301 SITE 1 AC3 10 LEU B 29 ASN B 30 ASP B 31 THR B 34 SITE 2 AC3 10 ARG B 36 MET B 58 HIS B 62 HOH B 301 SITE 3 AC3 10 LYS C 25 GLU C 100 SITE 1 AC4 3 PRO C 35 ARG C 36 NFA C 203 SITE 1 AC5 6 ARG C 48 LYS C 80 HOH C 317 HOH C 319 SITE 2 AC5 6 ARG D 48 LYS D 80 SITE 1 AC6 9 LEU C 29 ASN C 30 ASP C 31 THR C 34 SITE 2 AC6 9 ARG C 36 MET C 58 HIS C 62 SO4 C 201 SITE 3 AC6 9 HOH C 302 SITE 1 AC7 8 LEU D 29 ASN D 30 ASP D 31 THR D 34 SITE 2 AC7 8 ARG D 36 MET D 58 HIS D 62 HOH D 301 CRYST1 58.033 92.997 94.259 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017232 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010753 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010609 0.00000