HEADER TRANSFERASE 03-MAR-15 4YK0 TITLE CRYSTAL STRUCTURE OF THE CBP BROMODOMAIN IN COMPLEX WITH CPI098 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CREB-BINDING PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: BROMODOMAIN; COMPND 5 EC: 2.3.1.48; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CREBBP, CBP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS CBP, CPI098, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.F.BELLON,H.JAYARAM REVDAT 4 28-FEB-24 4YK0 1 REMARK REVDAT 3 03-NOV-21 4YK0 1 JRNL REMARK HET ATOM REVDAT 2 06-JUL-16 4YK0 1 JRNL REVDAT 1 20-APR-16 4YK0 0 JRNL AUTH S.GHOSH,A.TAYLOR,M.CHIN,H.R.HUANG,A.R.CONERY,J.A.MERTZ, JRNL AUTH 2 A.SALMERON,P.J.DAKLE,D.MELE,A.COTE,H.JAYARAM,J.W.SETSER, JRNL AUTH 3 F.POY,G.HATZIVASSILIOU,D.DEALMEIDA-NAGATA,P.SANDY,C.HATTON, JRNL AUTH 4 F.A.ROMERO,E.CHIANG,T.REIMER,T.CRAWFORD,E.PARDO,V.G.WATSON, JRNL AUTH 5 V.TSUI,A.G.COCHRAN,L.ZAWADZKE,J.C.HARMANGE,J.E.AUDIA, JRNL AUTH 6 B.M.BRYANT,R.T.CUMMINGS,S.R.MAGNUSON,J.L.GROGAN,S.F.BELLON, JRNL AUTH 7 B.K.ALBRECHT,R.J.SIMS,J.M.LORA JRNL TITL REGULATORY T CELL MODULATION BY CBP/EP300 BROMODOMAIN JRNL TITL 2 INHIBITION. JRNL REF J.BIOL.CHEM. V. 291 13014 2016 JRNL REFN ESSN 1083-351X JRNL PMID 27056325 JRNL DOI 10.1074/JBC.M115.708560 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 64.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 52073 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.246 REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2655 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3838 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2600 REMARK 3 BIN FREE R VALUE SET COUNT : 201 REMARK 3 BIN FREE R VALUE : 0.2630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3467 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 343 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.36000 REMARK 3 B22 (A**2) : -0.36000 REMARK 3 B33 (A**2) : 1.16000 REMARK 3 B12 (A**2) : -0.18000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.133 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.123 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.089 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.760 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3626 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3387 ; 0.009 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4930 ; 1.716 ; 1.987 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7753 ; 1.544 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 410 ; 5.540 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 178 ;37.043 ;24.270 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 604 ;13.384 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;22.597 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 519 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4016 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 830 ; 0.009 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1658 ; 1.025 ; 1.046 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1657 ; 1.005 ; 1.044 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2062 ; 1.602 ; 1.556 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 6 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1084 1196 B 1084 1196 6925 0.090 0.050 REMARK 3 2 A 1089 1188 C 1089 1188 5743 0.120 0.050 REMARK 3 3 A 1095 1186 D 1095 1186 5186 0.120 0.050 REMARK 3 4 B 1089 1188 C 1089 1188 5688 0.130 0.050 REMARK 3 5 B 1095 1186 D 1095 1186 5142 0.130 0.050 REMARK 3 6 C 1095 1186 D 1095 1186 5101 0.120 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1084 A 1196 REMARK 3 ORIGIN FOR THE GROUP (A): -27.5569 12.5008 -33.7481 REMARK 3 T TENSOR REMARK 3 T11: 0.0793 T22: 0.0578 REMARK 3 T33: 0.1035 T12: -0.0258 REMARK 3 T13: -0.0259 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 1.1866 L22: 0.2022 REMARK 3 L33: 0.2975 L12: 0.1201 REMARK 3 L13: 0.4217 L23: 0.1849 REMARK 3 S TENSOR REMARK 3 S11: -0.1001 S12: 0.0160 S13: 0.0498 REMARK 3 S21: -0.0136 S22: 0.0589 S23: 0.0360 REMARK 3 S31: -0.0775 S32: 0.0513 S33: 0.0412 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1084 B 1196 REMARK 3 ORIGIN FOR THE GROUP (A): -36.4557 -17.5114 -19.9493 REMARK 3 T TENSOR REMARK 3 T11: 0.0975 T22: 0.0512 REMARK 3 T33: 0.1013 T12: 0.0349 REMARK 3 T13: 0.0291 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 0.1430 L22: 1.6492 REMARK 3 L33: 0.7558 L12: 0.3796 REMARK 3 L13: -0.0908 L23: -0.8944 REMARK 3 S TENSOR REMARK 3 S11: 0.0067 S12: -0.0267 S13: 0.0403 REMARK 3 S21: -0.1290 S22: -0.1110 S23: -0.0321 REMARK 3 S31: 0.1759 S32: 0.0894 S33: 0.1043 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1089 C 1189 REMARK 3 ORIGIN FOR THE GROUP (A): -15.0584 -9.5035 3.5138 REMARK 3 T TENSOR REMARK 3 T11: 0.0610 T22: 0.2596 REMARK 3 T33: 0.0379 T12: 0.0894 REMARK 3 T13: 0.0130 T23: 0.0672 REMARK 3 L TENSOR REMARK 3 L11: 0.9335 L22: 0.4843 REMARK 3 L33: 0.9587 L12: -0.6669 REMARK 3 L13: -0.0717 L23: -0.0078 REMARK 3 S TENSOR REMARK 3 S11: 0.1563 S12: 0.3044 S13: 0.0666 REMARK 3 S21: -0.0860 S22: -0.2041 S23: -0.0561 REMARK 3 S31: -0.1013 S32: -0.1013 S33: 0.0478 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1095 D 1187 REMARK 3 ORIGIN FOR THE GROUP (A): -14.7265 -8.0930 -34.9704 REMARK 3 T TENSOR REMARK 3 T11: 0.0506 T22: 0.1307 REMARK 3 T33: 0.0742 T12: 0.0514 REMARK 3 T13: 0.0245 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 0.8746 L22: 0.3841 REMARK 3 L33: 0.4334 L12: -0.5440 REMARK 3 L13: -0.1007 L23: -0.0735 REMARK 3 S TENSOR REMARK 3 S11: 0.0721 S12: 0.0493 S13: 0.0320 REMARK 3 S21: -0.0550 S22: -0.0492 S23: -0.0205 REMARK 3 S31: -0.0091 S32: 0.0047 S33: -0.0230 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 4YK0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000207576. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0-7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54790 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 64.504 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09300 REMARK 200 FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.33700 REMARK 200 R SYM FOR SHELL (I) : 0.33700 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS, PH 6.5 27% PEG3350 0.1M REMARK 280 MAGNESIUM CHLORIDE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 61.35000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.42044 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 27.05667 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 61.35000 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 35.42044 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 27.05667 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 61.35000 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 35.42044 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.05667 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 70.84088 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 54.11333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 70.84088 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 54.11333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 70.84088 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 54.11333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 1083 REMARK 465 LYS B 1083 REMARK 465 LYS C 1083 REMARK 465 ILE C 1084 REMARK 465 PHE C 1085 REMARK 465 LYS C 1086 REMARK 465 PRO C 1087 REMARK 465 GLU C 1088 REMARK 465 GLN C 1148 REMARK 465 GLU C 1149 REMARK 465 ASP C 1190 REMARK 465 PRO C 1191 REMARK 465 VAL C 1192 REMARK 465 MET C 1193 REMARK 465 GLN C 1194 REMARK 465 SER C 1195 REMARK 465 LEU C 1196 REMARK 465 LYS D 1083 REMARK 465 ILE D 1084 REMARK 465 PHE D 1085 REMARK 465 LYS D 1086 REMARK 465 PRO D 1087 REMARK 465 GLU D 1088 REMARK 465 GLU D 1089 REMARK 465 LEU D 1090 REMARK 465 ARG D 1091 REMARK 465 GLN D 1092 REMARK 465 ALA D 1093 REMARK 465 LEU D 1094 REMARK 465 GLN D 1148 REMARK 465 GLU D 1149 REMARK 465 GLU D 1188 REMARK 465 ILE D 1189 REMARK 465 ASP D 1190 REMARK 465 PRO D 1191 REMARK 465 VAL D 1192 REMARK 465 MET D 1193 REMARK 465 GLN D 1194 REMARK 465 SER D 1195 REMARK 465 LEU D 1196 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A1086 CE NZ REMARK 470 GLN A1194 CG CD OE1 NE2 REMARK 470 LYS B1086 CG CD CE NZ REMARK 470 GLN B1118 CG CD OE1 NE2 REMARK 470 GLN B1194 CG CD OE1 NE2 REMARK 470 GLN C1113 CG CD OE1 NE2 REMARK 470 GLN C1118 CG CD OE1 NE2 REMARK 470 GLU C1183 CG CD OE1 OE2 REMARK 470 GLN C1187 CG CD OE1 NE2 REMARK 470 GLU D1099 CG CD OE1 OE2 REMARK 470 ARG D1103 CG CD NE CZ NH1 NH2 REMARK 470 GLN D1113 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 1176 O HOH A 1301 2.10 REMARK 500 OE2 GLU D 1107 O HOH D 1301 2.11 REMARK 500 O HOH B 1326 O HOH D 1353 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A1103 NE - CZ - NH2 ANGL. DEV. = 4.8 DEGREES REMARK 500 ASP A1105 CB - CG - OD2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG A1169 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A1169 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG B1103 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 ASP B1105 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP B1105 CB - CG - OD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ARG B1169 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 986 A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 986 B 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 986 C 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 986 D 1201 DBREF 4YK0 A 1083 1196 UNP Q92793 CBP_HUMAN 1045 1158 DBREF 4YK0 B 1083 1196 UNP Q92793 CBP_HUMAN 1045 1158 DBREF 4YK0 C 1083 1196 UNP Q92793 CBP_HUMAN 1045 1158 DBREF 4YK0 D 1083 1196 UNP Q92793 CBP_HUMAN 1045 1158 SEQRES 1 A 114 LYS ILE PHE LYS PRO GLU GLU LEU ARG GLN ALA LEU MET SEQRES 2 A 114 PRO THR LEU GLU ALA LEU TYR ARG GLN ASP PRO GLU SER SEQRES 3 A 114 LEU PRO PHE ARG GLN PRO VAL ASP PRO GLN LEU LEU GLY SEQRES 4 A 114 ILE PRO ASP TYR PHE ASP ILE VAL LYS ASN PRO MET ASP SEQRES 5 A 114 LEU SER THR ILE LYS ARG LYS LEU ASP THR GLY GLN TYR SEQRES 6 A 114 GLN GLU PRO TRP GLN TYR VAL ASP ASP VAL TRP LEU MET SEQRES 7 A 114 PHE ASN ASN ALA TRP LEU TYR ASN ARG LYS THR SER ARG SEQRES 8 A 114 VAL TYR LYS PHE CYS SER LYS LEU ALA GLU VAL PHE GLU SEQRES 9 A 114 GLN GLU ILE ASP PRO VAL MET GLN SER LEU SEQRES 1 B 114 LYS ILE PHE LYS PRO GLU GLU LEU ARG GLN ALA LEU MET SEQRES 2 B 114 PRO THR LEU GLU ALA LEU TYR ARG GLN ASP PRO GLU SER SEQRES 3 B 114 LEU PRO PHE ARG GLN PRO VAL ASP PRO GLN LEU LEU GLY SEQRES 4 B 114 ILE PRO ASP TYR PHE ASP ILE VAL LYS ASN PRO MET ASP SEQRES 5 B 114 LEU SER THR ILE LYS ARG LYS LEU ASP THR GLY GLN TYR SEQRES 6 B 114 GLN GLU PRO TRP GLN TYR VAL ASP ASP VAL TRP LEU MET SEQRES 7 B 114 PHE ASN ASN ALA TRP LEU TYR ASN ARG LYS THR SER ARG SEQRES 8 B 114 VAL TYR LYS PHE CYS SER LYS LEU ALA GLU VAL PHE GLU SEQRES 9 B 114 GLN GLU ILE ASP PRO VAL MET GLN SER LEU SEQRES 1 C 114 LYS ILE PHE LYS PRO GLU GLU LEU ARG GLN ALA LEU MET SEQRES 2 C 114 PRO THR LEU GLU ALA LEU TYR ARG GLN ASP PRO GLU SER SEQRES 3 C 114 LEU PRO PHE ARG GLN PRO VAL ASP PRO GLN LEU LEU GLY SEQRES 4 C 114 ILE PRO ASP TYR PHE ASP ILE VAL LYS ASN PRO MET ASP SEQRES 5 C 114 LEU SER THR ILE LYS ARG LYS LEU ASP THR GLY GLN TYR SEQRES 6 C 114 GLN GLU PRO TRP GLN TYR VAL ASP ASP VAL TRP LEU MET SEQRES 7 C 114 PHE ASN ASN ALA TRP LEU TYR ASN ARG LYS THR SER ARG SEQRES 8 C 114 VAL TYR LYS PHE CYS SER LYS LEU ALA GLU VAL PHE GLU SEQRES 9 C 114 GLN GLU ILE ASP PRO VAL MET GLN SER LEU SEQRES 1 D 114 LYS ILE PHE LYS PRO GLU GLU LEU ARG GLN ALA LEU MET SEQRES 2 D 114 PRO THR LEU GLU ALA LEU TYR ARG GLN ASP PRO GLU SER SEQRES 3 D 114 LEU PRO PHE ARG GLN PRO VAL ASP PRO GLN LEU LEU GLY SEQRES 4 D 114 ILE PRO ASP TYR PHE ASP ILE VAL LYS ASN PRO MET ASP SEQRES 5 D 114 LEU SER THR ILE LYS ARG LYS LEU ASP THR GLY GLN TYR SEQRES 6 D 114 GLN GLU PRO TRP GLN TYR VAL ASP ASP VAL TRP LEU MET SEQRES 7 D 114 PHE ASN ASN ALA TRP LEU TYR ASN ARG LYS THR SER ARG SEQRES 8 D 114 VAL TYR LYS PHE CYS SER LYS LEU ALA GLU VAL PHE GLU SEQRES 9 D 114 GLN GLU ILE ASP PRO VAL MET GLN SER LEU HET 986 A1201 13 HET EDO A1202 4 HET 986 B1201 13 HET 986 C1201 13 HET 986 D1201 13 HETNAM 986 (4R)-4-METHYL-1,3,4,5-TETRAHYDRO-2H-1,5-BENZODIAZEPIN- HETNAM 2 986 2-ONE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 986 4(C10 H12 N2 O) FORMUL 6 EDO C2 H6 O2 FORMUL 10 HOH *343(H2 O) HELIX 1 AA1 LYS A 1086 GLN A 1104 1 19 HELIX 2 AA2 SER A 1108 ARG A 1112 5 5 HELIX 3 AA3 ASP A 1124 VAL A 1129 1 6 HELIX 4 AA4 ASP A 1134 THR A 1144 1 11 HELIX 5 AA5 GLU A 1149 ASN A 1168 1 20 HELIX 6 AA6 SER A 1172 LEU A 1196 1 25 HELIX 7 AA7 LYS B 1086 GLN B 1104 1 19 HELIX 8 AA8 SER B 1108 ARG B 1112 5 5 HELIX 9 AA9 ASP B 1116 GLY B 1121 1 6 HELIX 10 AB1 ASP B 1124 VAL B 1129 1 6 HELIX 11 AB2 ASP B 1134 THR B 1144 1 11 HELIX 12 AB3 GLU B 1149 ASN B 1168 1 20 HELIX 13 AB4 SER B 1172 LEU B 1196 1 25 HELIX 14 AB5 LEU C 1090 GLN C 1104 1 15 HELIX 15 AB6 SER C 1108 ARG C 1112 5 5 HELIX 16 AB7 ASP C 1116 GLY C 1121 1 6 HELIX 17 AB8 ASP C 1124 VAL C 1129 1 6 HELIX 18 AB9 ASP C 1134 THR C 1144 1 11 HELIX 19 AC1 TRP C 1151 ASN C 1168 1 18 HELIX 20 AC2 SER C 1172 ILE C 1189 1 18 HELIX 21 AC3 PRO D 1096 GLN D 1104 1 9 HELIX 22 AC4 SER D 1108 ARG D 1112 5 5 HELIX 23 AC5 ASP D 1116 GLY D 1121 1 6 HELIX 24 AC6 ASP D 1124 VAL D 1129 1 6 HELIX 25 AC7 ASP D 1134 THR D 1144 1 11 HELIX 26 AC8 TRP D 1151 ASN D 1168 1 18 HELIX 27 AC9 SER D 1172 GLN D 1187 1 16 CISPEP 1 ASP A 1105 PRO A 1106 0 21.07 CISPEP 2 ASP B 1105 PRO B 1106 0 18.51 CISPEP 3 ASP C 1105 PRO C 1106 0 17.67 CISPEP 4 ASP D 1105 PRO D 1106 0 14.47 SITE 1 AC1 4 PRO A1110 VAL A1115 ASN A1168 HOH A1318 SITE 1 AC2 5 PRO A1123 ASP A1124 ARG B1169 THR B1171 SITE 2 AC2 5 SER B1172 SITE 1 AC3 4 PRO B1110 VAL B1115 ASN B1168 HOH B1308 SITE 1 AC4 6 PRO C1110 VAL C1115 TYR C1125 TYR C1167 SITE 2 AC4 6 ASN C1168 HOH C1308 SITE 1 AC5 6 PRO D1110 VAL D1115 TYR D1125 ASN D1168 SITE 2 AC5 6 VAL D1174 HOH D1303 CRYST1 122.700 122.700 81.170 90.00 90.00 120.00 H 3 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008150 0.004705 0.000000 0.00000 SCALE2 0.000000 0.009411 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012320 0.00000