data_4YKL # _entry.id 4YKL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4YKL pdb_00004ykl 10.2210/pdb4ykl/pdb WWPDB D_1000207612 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4YKL _pdbx_database_status.recvd_initial_deposition_date 2015-03-04 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jacewicz, A.' 1 'Chauleau, M.' 2 'Shuman, S.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 43 _citation.language ? _citation.page_first 6075 _citation.page_last 6083 _citation.title ;DNA3'pp5'G de-capping activity of aprataxin: effect of cap nucleoside analogs and structural basis for guanosine recognition. ; _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkv501 _citation.pdbx_database_id_PubMed 26007660 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chauleau, M.' 1 ? primary 'Jacewicz, A.' 2 ? primary 'Shuman, S.' 3 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 4YKL _cell.details ? _cell.formula_units_Z ? _cell.length_a 119.083 _cell.length_a_esd ? _cell.length_b 119.083 _cell.length_b_esd ? _cell.length_c 36.564 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YKL _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Aprataxin-like protein' 23226.652 1 3.-.-.- ? 'UNP residues 33-232' ? 2 polymer syn ;DNA (5'-D(*GP*AP*AP*TP*CP*AP*TP*AP*AP*C)-3') ; 3037.031 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 4 non-polymer syn GUANOSINE 283.241 1 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 4 ? ? ? ? 6 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 7 water nat water 18.015 53 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Hit family protein 3' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SFRDNLKVYIESPESYKNVIYYDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLI FDEARNCLSQQLTNEALCNYIKVGFHAGPSMNNLHLHIMTLDHVSPSLKNSAHYISFTSPFFVKIDTPTSNLPTRGTLTS LFQEDLKCWRCGETFGRHFTKLKAHLQEEYDDWLDKSVSM ; ;SFRDNLKVYIESPESYKNVIYYDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLI FDEARNCLSQQLTNEALCNYIKVGFHAGPSMNNLHLHIMTLDHVSPSLKNSAHYISFTSPFFVKIDTPTSNLPTRGTLTS LFQEDLKCWRCGETFGRHFTKLKAHLQEEYDDWLDKSVSM ; B ? 2 polydeoxyribonucleotide no no '(DG)(DA)(DA)(DT)(DC)(DA)(DT)(DA)(DA)(DC)' GAATCATAAC A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 PHE n 1 3 ARG n 1 4 ASP n 1 5 ASN n 1 6 LEU n 1 7 LYS n 1 8 VAL n 1 9 TYR n 1 10 ILE n 1 11 GLU n 1 12 SER n 1 13 PRO n 1 14 GLU n 1 15 SER n 1 16 TYR n 1 17 LYS n 1 18 ASN n 1 19 VAL n 1 20 ILE n 1 21 TYR n 1 22 TYR n 1 23 ASP n 1 24 ASP n 1 25 ASP n 1 26 VAL n 1 27 VAL n 1 28 LEU n 1 29 VAL n 1 30 ARG n 1 31 ASP n 1 32 MET n 1 33 PHE n 1 34 PRO n 1 35 LYS n 1 36 SER n 1 37 LYS n 1 38 MET n 1 39 HIS n 1 40 LEU n 1 41 LEU n 1 42 LEU n 1 43 MET n 1 44 THR n 1 45 ARG n 1 46 ASP n 1 47 PRO n 1 48 HIS n 1 49 LEU n 1 50 THR n 1 51 HIS n 1 52 VAL n 1 53 HIS n 1 54 PRO n 1 55 LEU n 1 56 GLU n 1 57 ILE n 1 58 MET n 1 59 MET n 1 60 LYS n 1 61 HIS n 1 62 ARG n 1 63 SER n 1 64 LEU n 1 65 VAL n 1 66 GLU n 1 67 LYS n 1 68 LEU n 1 69 VAL n 1 70 SER n 1 71 TYR n 1 72 VAL n 1 73 GLN n 1 74 GLY n 1 75 ASP n 1 76 LEU n 1 77 SER n 1 78 GLY n 1 79 LEU n 1 80 ILE n 1 81 PHE n 1 82 ASP n 1 83 GLU n 1 84 ALA n 1 85 ARG n 1 86 ASN n 1 87 CYS n 1 88 LEU n 1 89 SER n 1 90 GLN n 1 91 GLN n 1 92 LEU n 1 93 THR n 1 94 ASN n 1 95 GLU n 1 96 ALA n 1 97 LEU n 1 98 CYS n 1 99 ASN n 1 100 TYR n 1 101 ILE n 1 102 LYS n 1 103 VAL n 1 104 GLY n 1 105 PHE n 1 106 HIS n 1 107 ALA n 1 108 GLY n 1 109 PRO n 1 110 SER n 1 111 MET n 1 112 ASN n 1 113 ASN n 1 114 LEU n 1 115 HIS n 1 116 LEU n 1 117 HIS n 1 118 ILE n 1 119 MET n 1 120 THR n 1 121 LEU n 1 122 ASP n 1 123 HIS n 1 124 VAL n 1 125 SER n 1 126 PRO n 1 127 SER n 1 128 LEU n 1 129 LYS n 1 130 ASN n 1 131 SER n 1 132 ALA n 1 133 HIS n 1 134 TYR n 1 135 ILE n 1 136 SER n 1 137 PHE n 1 138 THR n 1 139 SER n 1 140 PRO n 1 141 PHE n 1 142 PHE n 1 143 VAL n 1 144 LYS n 1 145 ILE n 1 146 ASP n 1 147 THR n 1 148 PRO n 1 149 THR n 1 150 SER n 1 151 ASN n 1 152 LEU n 1 153 PRO n 1 154 THR n 1 155 ARG n 1 156 GLY n 1 157 THR n 1 158 LEU n 1 159 THR n 1 160 SER n 1 161 LEU n 1 162 PHE n 1 163 GLN n 1 164 GLU n 1 165 ASP n 1 166 LEU n 1 167 LYS n 1 168 CYS n 1 169 TRP n 1 170 ARG n 1 171 CYS n 1 172 GLY n 1 173 GLU n 1 174 THR n 1 175 PHE n 1 176 GLY n 1 177 ARG n 1 178 HIS n 1 179 PHE n 1 180 THR n 1 181 LYS n 1 182 LEU n 1 183 LYS n 1 184 ALA n 1 185 HIS n 1 186 LEU n 1 187 GLN n 1 188 GLU n 1 189 GLU n 1 190 TYR n 1 191 ASP n 1 192 ASP n 1 193 TRP n 1 194 LEU n 1 195 ASP n 1 196 LYS n 1 197 SER n 1 198 VAL n 1 199 SER n 1 200 MET n 2 1 DG n 2 2 DA n 2 3 DA n 2 4 DT n 2 5 DC n 2 6 DA n 2 7 DT n 2 8 DA n 2 9 DA n 2 10 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 200 _entity_src_gen.gene_src_common_name 'Fission yeast' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'hnt3, SPCC18.09c' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain '972 / ATCC 24843' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Schizosaccharomyces pombe (strain 972 / ATCC 24843)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 284812 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pet28b-His10-Smt3 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 10 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details 'chemical synthesis' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP APTX_SCHPO O74859 ? 1 ;SFRDNLKVYIESPESYKNVIYYDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLI FDEARNCLSQQLTNEALCNYIKVGFHAGPSMNNLHLHIMTLDHVSPSLKNSAHYISFTSPFFVKIDTPTSNLPTRGTLTS LFQEDLKCWRCGETFGRHFTKLKAHLQEEYDDWLDKSVSM ; 33 2 PDB 4YKL 4YKL ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4YKL B 1 ? 200 ? O74859 33 ? 232 ? 33 232 2 2 4YKL A 1 ? 10 ? 4YKL 1 ? 10 ? 1 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GMP non-polymer . GUANOSINE ? 'C10 H13 N5 O5' 283.241 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4YKL _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.26 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 62.2 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '25% (w/v) PEG-3350, 0.15 M Mg-Acetate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-02-14 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.77 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.77 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 40.0 _reflns.entry_id 4YKL _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.25 _reflns.d_resolution_low 59.54 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 14369 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.2 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.073 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.25 _reflns_shell.d_res_low 2.32 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.6 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.722 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 10.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 44.8 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4YKL _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.250 _refine.ls_d_res_low 59.54 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14364 _refine.ls_number_reflns_R_free 866 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.94 _refine.ls_percent_reflns_R_free 6.03 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1836 _refine.ls_R_factor_R_free 0.2402 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1800 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4XBA _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details 'Random selection' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.23 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.26 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1593 _refine_hist.pdbx_number_atoms_nucleic_acid 202 _refine_hist.pdbx_number_atoms_ligand 47 _refine_hist.number_atoms_solvent 53 _refine_hist.number_atoms_total 1895 _refine_hist.d_res_high 2.250 _refine_hist.d_res_low 59.54 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 1907 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.188 ? 2620 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 17.471 ? 717 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.044 ? 289 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 291 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.2501 2.3911 . . 157 2203 100.00 . . . 0.2776 . 0.2127 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3911 2.5757 . . 134 2239 100.00 . . . 0.2624 . 0.2131 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5757 2.8349 . . 136 2253 100.00 . . . 0.2595 . 0.2065 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8349 3.2451 . . 139 2224 100.00 . . . 0.2623 . 0.1934 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2451 4.0884 . . 125 2282 100.00 . . . 0.2453 . 0.1671 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.0884 59.5623 . . 175 2297 100.00 . . . 0.2175 . 0.1653 . . . . . . . . . . # _struct.entry_id 4YKL _struct.title 'Hnt3 in complex with DNA and guanosine' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4YKL _struct_keywords.text 'GMP, nucleotidyl transferase, HYDROLASE, Hydrolase-DNA complex' _struct_keywords.pdbx_keywords Hydrolase/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 6 ? J N N 6 ? K N N 7 ? L N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 1 ? ASN A 5 ? SER B 33 ASN B 37 5 ? 5 HELX_P HELX_P2 AA2 LEU A 6 ? SER A 12 ? LEU B 38 SER B 44 1 ? 7 HELX_P HELX_P3 AA3 PRO A 13 ? TYR A 16 ? PRO B 45 TYR B 48 5 ? 4 HELX_P HELX_P4 AA4 HIS A 53 ? HIS A 61 ? HIS B 85 HIS B 93 1 ? 9 HELX_P HELX_P5 AA5 HIS A 61 ? GLY A 74 ? HIS B 93 GLY B 106 1 ? 14 HELX_P HELX_P6 AA6 LEU A 76 ? LEU A 88 ? LEU B 108 LEU B 120 1 ? 13 HELX_P HELX_P7 AA7 THR A 93 ? ASN A 99 ? THR B 125 ASN B 131 1 ? 7 HELX_P HELX_P8 AA8 ASN A 130 ? SER A 139 ? ASN B 162 SER B 171 1 ? 10 HELX_P HELX_P9 AA9 PRO A 148 ? LEU A 152 ? PRO B 180 LEU B 184 5 ? 5 HELX_P HELX_P10 AB1 SER A 160 ? GLU A 164 ? SER B 192 GLU B 196 5 ? 5 HELX_P HELX_P11 AB2 HIS A 178 ? VAL A 198 ? HIS B 210 VAL B 230 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 168 SG ? ? ? 1_555 C ZN . ZN ? ? B CYS 200 B ZN 301 1_555 ? ? ? ? ? ? ? 2.309 ? ? metalc2 metalc ? ? A CYS 171 SG ? ? ? 1_555 C ZN . ZN ? ? B CYS 203 B ZN 301 1_555 ? ? ? ? ? ? ? 2.318 ? ? metalc3 metalc ? ? A HIS 185 NE2 ? ? ? 1_555 C ZN . ZN ? ? B HIS 217 B ZN 301 1_555 ? ? ? ? ? ? ? 2.018 ? ? metalc4 metalc ? ? A GLU 189 OE1 ? ? ? 1_555 C ZN . ZN ? ? B GLU 221 B ZN 301 1_555 ? ? ? ? ? ? ? 1.956 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 B DC 10 N3 ? ? A DG 1 A DC 10 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 B DC 10 O2 ? ? A DG 1 A DC 10 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 B DC 10 N4 ? ? A DG 1 A DC 10 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 10 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 10 A DG 1 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 10 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 10 A DG 1 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 10 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 10 A DG 1 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 19 ? TYR A 22 ? VAL B 51 TYR B 54 AA1 2 VAL A 26 ? ARG A 30 ? VAL B 58 ARG B 62 AA1 3 HIS A 39 ? THR A 44 ? HIS B 71 THR B 76 AA1 4 HIS A 115 ? THR A 120 ? HIS B 147 THR B 152 AA1 5 ILE A 101 ? HIS A 106 ? ILE B 133 HIS B 138 AA1 6 PHE A 142 ? LYS A 144 ? PHE B 174 LYS B 176 AA2 1 LEU A 166 ? LYS A 167 ? LEU B 198 LYS B 199 AA2 2 THR A 174 ? GLY A 176 ? THR B 206 GLY B 208 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TYR A 21 ? N TYR B 53 O LEU A 28 ? O LEU B 60 AA1 2 3 N VAL A 27 ? N VAL B 59 O MET A 43 ? O MET B 75 AA1 3 4 N LEU A 40 ? N LEU B 72 O ILE A 118 ? O ILE B 150 AA1 4 5 O HIS A 117 ? O HIS B 149 N GLY A 104 ? N GLY B 136 AA1 5 6 N PHE A 105 ? N PHE B 137 O VAL A 143 ? O VAL B 175 AA2 1 2 N LEU A 166 ? N LEU B 198 O GLY A 176 ? O GLY B 208 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B ZN 301 ? 4 'binding site for residue ZN B 301' AC2 Software B GMP 302 ? 10 'binding site for residue GMP B 302' AC3 Software B GOL 303 ? 3 'binding site for residue GOL B 303' AC4 Software B GOL 304 ? 4 'binding site for residue GOL B 304' AC5 Software B GOL 305 ? 4 'binding site for residue GOL B 305' AC6 Software B GOL 306 ? 1 'binding site for residue GOL B 306' AC7 Software B CL 307 ? 3 'binding site for residue CL B 307' AC8 Software B CL 308 ? 1 'binding site for residue CL B 308' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 168 ? CYS B 200 . ? 1_555 ? 2 AC1 4 CYS A 171 ? CYS B 203 . ? 1_555 ? 3 AC1 4 HIS A 185 ? HIS B 217 . ? 1_555 ? 4 AC1 4 GLU A 189 ? GLU B 221 . ? 1_555 ? 5 AC2 10 DG B 1 ? DG A 1 . ? 1_555 ? 6 AC2 10 TYR A 9 ? TYR B 41 . ? 1_555 ? 7 AC2 10 ARG A 30 ? ARG B 62 . ? 1_555 ? 8 AC2 10 ASP A 31 ? ASP B 63 . ? 1_555 ? 9 AC2 10 MET A 32 ? MET B 64 . ? 1_555 ? 10 AC2 10 PHE A 33 ? PHE B 65 . ? 1_555 ? 11 AC2 10 LYS A 35 ? LYS B 67 . ? 1_555 ? 12 AC2 10 MET A 111 ? MET B 143 . ? 1_555 ? 13 AC2 10 HIS A 115 ? HIS B 147 . ? 1_555 ? 14 AC2 10 HOH K . ? HOH B 434 . ? 1_555 ? 15 AC3 3 VAL A 72 ? VAL B 104 . ? 1_555 ? 16 AC3 3 SER A 77 ? SER B 109 . ? 1_555 ? 17 AC3 3 CYS A 98 ? CYS B 130 . ? 1_555 ? 18 AC4 4 DG B 1 ? DG A 1 . ? 1_555 ? 19 AC4 4 GLY A 108 ? GLY B 140 . ? 1_555 ? 20 AC4 4 SER A 110 ? SER B 142 . ? 1_555 ? 21 AC4 4 HOH K . ? HOH B 424 . ? 1_555 ? 22 AC5 4 LYS A 17 ? LYS B 49 . ? 1_554 ? 23 AC5 4 HIS A 185 ? HIS B 217 . ? 1_555 ? 24 AC5 4 GLU A 188 ? GLU B 220 . ? 1_555 ? 25 AC5 4 ASP A 192 ? ASP B 224 . ? 1_555 ? 26 AC6 1 SER A 70 ? SER B 102 . ? 1_555 ? 27 AC7 3 GLU A 66 ? GLU B 98 . ? 1_555 ? 28 AC7 3 VAL A 69 ? VAL B 101 . ? 1_555 ? 29 AC7 3 ASN A 94 ? ASN B 126 . ? 3_565 ? 30 AC8 1 LYS A 129 ? LYS B 161 . ? 1_555 ? # _atom_sites.entry_id 4YKL _atom_sites.fract_transf_matrix[1][1] 0.008398 _atom_sites.fract_transf_matrix[1][2] 0.004848 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009697 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027349 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 33 33 SER SER B . n A 1 2 PHE 2 34 34 PHE PHE B . n A 1 3 ARG 3 35 35 ARG ARG B . n A 1 4 ASP 4 36 36 ASP ASP B . n A 1 5 ASN 5 37 37 ASN ASN B . n A 1 6 LEU 6 38 38 LEU LEU B . n A 1 7 LYS 7 39 39 LYS LYS B . n A 1 8 VAL 8 40 40 VAL VAL B . n A 1 9 TYR 9 41 41 TYR TYR B . n A 1 10 ILE 10 42 42 ILE ILE B . n A 1 11 GLU 11 43 43 GLU GLU B . n A 1 12 SER 12 44 44 SER SER B . n A 1 13 PRO 13 45 45 PRO PRO B . n A 1 14 GLU 14 46 46 GLU GLU B . n A 1 15 SER 15 47 47 SER SER B . n A 1 16 TYR 16 48 48 TYR TYR B . n A 1 17 LYS 17 49 49 LYS LYS B . n A 1 18 ASN 18 50 50 ASN ASN B . n A 1 19 VAL 19 51 51 VAL VAL B . n A 1 20 ILE 20 52 52 ILE ILE B . n A 1 21 TYR 21 53 53 TYR TYR B . n A 1 22 TYR 22 54 54 TYR TYR B . n A 1 23 ASP 23 55 55 ASP ASP B . n A 1 24 ASP 24 56 56 ASP ASP B . n A 1 25 ASP 25 57 57 ASP ASP B . n A 1 26 VAL 26 58 58 VAL VAL B . n A 1 27 VAL 27 59 59 VAL VAL B . n A 1 28 LEU 28 60 60 LEU LEU B . n A 1 29 VAL 29 61 61 VAL VAL B . n A 1 30 ARG 30 62 62 ARG ARG B . n A 1 31 ASP 31 63 63 ASP ASP B . n A 1 32 MET 32 64 64 MET MET B . n A 1 33 PHE 33 65 65 PHE PHE B . n A 1 34 PRO 34 66 66 PRO PRO B . n A 1 35 LYS 35 67 67 LYS LYS B . n A 1 36 SER 36 68 68 SER SER B . n A 1 37 LYS 37 69 69 LYS LYS B . n A 1 38 MET 38 70 70 MET MET B . n A 1 39 HIS 39 71 71 HIS HIS B . n A 1 40 LEU 40 72 72 LEU LEU B . n A 1 41 LEU 41 73 73 LEU LEU B . n A 1 42 LEU 42 74 74 LEU LEU B . n A 1 43 MET 43 75 75 MET MET B . n A 1 44 THR 44 76 76 THR THR B . n A 1 45 ARG 45 77 77 ARG ARG B . n A 1 46 ASP 46 78 78 ASP ASP B . n A 1 47 PRO 47 79 79 PRO PRO B . n A 1 48 HIS 48 80 80 HIS HIS B . n A 1 49 LEU 49 81 81 LEU LEU B . n A 1 50 THR 50 82 82 THR THR B . n A 1 51 HIS 51 83 83 HIS HIS B . n A 1 52 VAL 52 84 84 VAL VAL B . n A 1 53 HIS 53 85 85 HIS HIS B . n A 1 54 PRO 54 86 86 PRO PRO B . n A 1 55 LEU 55 87 87 LEU LEU B . n A 1 56 GLU 56 88 88 GLU GLU B . n A 1 57 ILE 57 89 89 ILE ILE B . n A 1 58 MET 58 90 90 MET MET B . n A 1 59 MET 59 91 91 MET MET B . n A 1 60 LYS 60 92 92 LYS LYS B . n A 1 61 HIS 61 93 93 HIS HIS B . n A 1 62 ARG 62 94 94 ARG ARG B . n A 1 63 SER 63 95 95 SER SER B . n A 1 64 LEU 64 96 96 LEU LEU B . n A 1 65 VAL 65 97 97 VAL VAL B . n A 1 66 GLU 66 98 98 GLU GLU B . n A 1 67 LYS 67 99 99 LYS LYS B . n A 1 68 LEU 68 100 100 LEU LEU B . n A 1 69 VAL 69 101 101 VAL VAL B . n A 1 70 SER 70 102 102 SER SER B . n A 1 71 TYR 71 103 103 TYR TYR B . n A 1 72 VAL 72 104 104 VAL VAL B . n A 1 73 GLN 73 105 105 GLN GLN B . n A 1 74 GLY 74 106 106 GLY GLY B . n A 1 75 ASP 75 107 107 ASP ASP B . n A 1 76 LEU 76 108 108 LEU LEU B . n A 1 77 SER 77 109 109 SER SER B . n A 1 78 GLY 78 110 110 GLY GLY B . n A 1 79 LEU 79 111 111 LEU LEU B . n A 1 80 ILE 80 112 112 ILE ILE B . n A 1 81 PHE 81 113 113 PHE PHE B . n A 1 82 ASP 82 114 114 ASP ASP B . n A 1 83 GLU 83 115 115 GLU GLU B . n A 1 84 ALA 84 116 116 ALA ALA B . n A 1 85 ARG 85 117 117 ARG ARG B . n A 1 86 ASN 86 118 118 ASN ASN B . n A 1 87 CYS 87 119 119 CYS CYS B . n A 1 88 LEU 88 120 120 LEU LEU B . n A 1 89 SER 89 121 121 SER SER B . n A 1 90 GLN 90 122 122 GLN GLN B . n A 1 91 GLN 91 123 123 GLN GLN B . n A 1 92 LEU 92 124 124 LEU LEU B . n A 1 93 THR 93 125 125 THR THR B . n A 1 94 ASN 94 126 126 ASN ASN B . n A 1 95 GLU 95 127 127 GLU GLU B . n A 1 96 ALA 96 128 128 ALA ALA B . n A 1 97 LEU 97 129 129 LEU LEU B . n A 1 98 CYS 98 130 130 CYS CYS B . n A 1 99 ASN 99 131 131 ASN ASN B . n A 1 100 TYR 100 132 132 TYR TYR B . n A 1 101 ILE 101 133 133 ILE ILE B . n A 1 102 LYS 102 134 134 LYS LYS B . n A 1 103 VAL 103 135 135 VAL VAL B . n A 1 104 GLY 104 136 136 GLY GLY B . n A 1 105 PHE 105 137 137 PHE PHE B . n A 1 106 HIS 106 138 138 HIS HIS B . n A 1 107 ALA 107 139 139 ALA ALA B . n A 1 108 GLY 108 140 140 GLY GLY B . n A 1 109 PRO 109 141 141 PRO PRO B . n A 1 110 SER 110 142 142 SER SER B . n A 1 111 MET 111 143 143 MET MET B . n A 1 112 ASN 112 144 144 ASN ASN B . n A 1 113 ASN 113 145 145 ASN ASN B . n A 1 114 LEU 114 146 146 LEU LEU B . n A 1 115 HIS 115 147 147 HIS HIS B . n A 1 116 LEU 116 148 148 LEU LEU B . n A 1 117 HIS 117 149 149 HIS HIS B . n A 1 118 ILE 118 150 150 ILE ILE B . n A 1 119 MET 119 151 151 MET MET B . n A 1 120 THR 120 152 152 THR THR B . n A 1 121 LEU 121 153 153 LEU LEU B . n A 1 122 ASP 122 154 154 ASP ASP B . n A 1 123 HIS 123 155 155 HIS HIS B . n A 1 124 VAL 124 156 156 VAL VAL B . n A 1 125 SER 125 157 157 SER SER B . n A 1 126 PRO 126 158 158 PRO PRO B . n A 1 127 SER 127 159 159 SER SER B . n A 1 128 LEU 128 160 160 LEU LEU B . n A 1 129 LYS 129 161 161 LYS LYS B . n A 1 130 ASN 130 162 162 ASN ASN B . n A 1 131 SER 131 163 163 SER SER B . n A 1 132 ALA 132 164 164 ALA ALA B . n A 1 133 HIS 133 165 165 HIS HIS B . n A 1 134 TYR 134 166 166 TYR TYR B . n A 1 135 ILE 135 167 167 ILE ILE B . n A 1 136 SER 136 168 168 SER SER B . n A 1 137 PHE 137 169 169 PHE PHE B . n A 1 138 THR 138 170 170 THR THR B . n A 1 139 SER 139 171 171 SER SER B . n A 1 140 PRO 140 172 172 PRO PRO B . n A 1 141 PHE 141 173 173 PHE PHE B . n A 1 142 PHE 142 174 174 PHE PHE B . n A 1 143 VAL 143 175 175 VAL VAL B . n A 1 144 LYS 144 176 176 LYS LYS B . n A 1 145 ILE 145 177 177 ILE ILE B . n A 1 146 ASP 146 178 178 ASP ASP B . n A 1 147 THR 147 179 179 THR THR B . n A 1 148 PRO 148 180 180 PRO PRO B . n A 1 149 THR 149 181 181 THR THR B . n A 1 150 SER 150 182 182 SER SER B . n A 1 151 ASN 151 183 183 ASN ASN B . n A 1 152 LEU 152 184 184 LEU LEU B . n A 1 153 PRO 153 185 185 PRO PRO B . n A 1 154 THR 154 186 186 THR THR B . n A 1 155 ARG 155 187 187 ARG ARG B . n A 1 156 GLY 156 188 ? ? ? B . n A 1 157 THR 157 189 ? ? ? B . n A 1 158 LEU 158 190 ? ? ? B . n A 1 159 THR 159 191 191 THR THR B . n A 1 160 SER 160 192 192 SER SER B . n A 1 161 LEU 161 193 193 LEU LEU B . n A 1 162 PHE 162 194 194 PHE PHE B . n A 1 163 GLN 163 195 195 GLN GLN B . n A 1 164 GLU 164 196 196 GLU GLU B . n A 1 165 ASP 165 197 197 ASP ASP B . n A 1 166 LEU 166 198 198 LEU LEU B . n A 1 167 LYS 167 199 199 LYS LYS B . n A 1 168 CYS 168 200 200 CYS CYS B . n A 1 169 TRP 169 201 201 TRP TRP B . n A 1 170 ARG 170 202 202 ARG ARG B . n A 1 171 CYS 171 203 203 CYS CYS B . n A 1 172 GLY 172 204 204 GLY GLY B . n A 1 173 GLU 173 205 205 GLU GLU B . n A 1 174 THR 174 206 206 THR THR B . n A 1 175 PHE 175 207 207 PHE PHE B . n A 1 176 GLY 176 208 208 GLY GLY B . n A 1 177 ARG 177 209 209 ARG ARG B . n A 1 178 HIS 178 210 210 HIS HIS B . n A 1 179 PHE 179 211 211 PHE PHE B . n A 1 180 THR 180 212 212 THR THR B . n A 1 181 LYS 181 213 213 LYS LYS B . n A 1 182 LEU 182 214 214 LEU LEU B . n A 1 183 LYS 183 215 215 LYS LYS B . n A 1 184 ALA 184 216 216 ALA ALA B . n A 1 185 HIS 185 217 217 HIS HIS B . n A 1 186 LEU 186 218 218 LEU LEU B . n A 1 187 GLN 187 219 219 GLN GLN B . n A 1 188 GLU 188 220 220 GLU GLU B . n A 1 189 GLU 189 221 221 GLU GLU B . n A 1 190 TYR 190 222 222 TYR TYR B . n A 1 191 ASP 191 223 223 ASP ASP B . n A 1 192 ASP 192 224 224 ASP ASP B . n A 1 193 TRP 193 225 225 TRP TRP B . n A 1 194 LEU 194 226 226 LEU LEU B . n A 1 195 ASP 195 227 227 ASP ASP B . n A 1 196 LYS 196 228 228 LYS LYS B . n A 1 197 SER 197 229 229 SER SER B . n A 1 198 VAL 198 230 230 VAL VAL B . n A 1 199 SER 199 231 ? ? ? B . n A 1 200 MET 200 232 ? ? ? B . n B 2 1 DG 1 1 1 DG DG A . n B 2 2 DA 2 2 2 DA DA A . n B 2 3 DA 3 3 3 DA DA A . n B 2 4 DT 4 4 4 DT DT A . n B 2 5 DC 5 5 5 DC DC A . n B 2 6 DA 6 6 6 DA DA A . n B 2 7 DT 7 7 7 DT DT A . n B 2 8 DA 8 8 8 DA DA A . n B 2 9 DA 9 9 9 DA DA A . n B 2 10 DC 10 10 10 DC DC A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 301 1 ZN ZN B . D 4 GMP 1 302 1 GMP 5GP B . E 5 GOL 1 303 1 GOL GOL B . F 5 GOL 1 304 2 GOL GOL B . G 5 GOL 1 305 3 GOL GOL B . H 5 GOL 1 306 4 GOL GOL B . I 6 CL 1 307 1 CL CL B . J 6 CL 1 308 1 CL CL B . K 7 HOH 1 401 29 HOH HOH B . K 7 HOH 2 402 42 HOH HOH B . K 7 HOH 3 403 30 HOH HOH B . K 7 HOH 4 404 23 HOH HOH B . K 7 HOH 5 405 39 HOH HOH B . K 7 HOH 6 406 38 HOH HOH B . K 7 HOH 7 407 35 HOH HOH B . K 7 HOH 8 408 37 HOH HOH B . K 7 HOH 9 409 21 HOH HOH B . K 7 HOH 10 410 18 HOH HOH B . K 7 HOH 11 411 47 HOH HOH B . K 7 HOH 12 412 49 HOH HOH B . K 7 HOH 13 413 48 HOH HOH B . K 7 HOH 14 414 1 HOH HOH B . K 7 HOH 15 415 2 HOH HOH B . K 7 HOH 16 416 3 HOH HOH B . K 7 HOH 17 417 5 HOH HOH B . K 7 HOH 18 418 6 HOH HOH B . K 7 HOH 19 419 7 HOH HOH B . K 7 HOH 20 420 8 HOH HOH B . K 7 HOH 21 421 9 HOH HOH B . K 7 HOH 22 422 10 HOH HOH B . K 7 HOH 23 423 11 HOH HOH B . K 7 HOH 24 424 12 HOH HOH B . K 7 HOH 25 425 13 HOH HOH B . K 7 HOH 26 426 14 HOH HOH B . K 7 HOH 27 427 15 HOH HOH B . K 7 HOH 28 428 16 HOH HOH B . K 7 HOH 29 429 17 HOH HOH B . K 7 HOH 30 430 19 HOH HOH B . K 7 HOH 31 431 20 HOH HOH B . K 7 HOH 32 432 22 HOH HOH B . K 7 HOH 33 433 24 HOH HOH B . K 7 HOH 34 434 25 HOH HOH B . K 7 HOH 35 435 27 HOH HOH B . K 7 HOH 36 436 28 HOH HOH B . K 7 HOH 37 437 31 HOH HOH B . K 7 HOH 38 438 32 HOH HOH B . K 7 HOH 39 439 33 HOH HOH B . K 7 HOH 40 440 34 HOH HOH B . K 7 HOH 41 441 40 HOH HOH B . K 7 HOH 42 442 41 HOH HOH B . K 7 HOH 43 443 43 HOH HOH B . K 7 HOH 44 444 44 HOH HOH B . K 7 HOH 45 445 45 HOH HOH B . K 7 HOH 46 446 50 HOH HOH B . K 7 HOH 47 447 53 HOH HOH B . L 7 HOH 1 101 46 HOH HOH A . L 7 HOH 2 102 26 HOH HOH A . L 7 HOH 3 103 52 HOH HOH A . L 7 HOH 4 104 51 HOH HOH A . L 7 HOH 5 105 4 HOH HOH A . L 7 HOH 6 106 36 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6740 ? 1 MORE -75 ? 1 'SSA (A^2)' 21610 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_556 -x,-x+y,-z+1 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 36.5640000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 168 ? B CYS 200 ? 1_555 ZN ? C ZN . ? B ZN 301 ? 1_555 SG ? A CYS 171 ? B CYS 203 ? 1_555 118.0 ? 2 SG ? A CYS 168 ? B CYS 200 ? 1_555 ZN ? C ZN . ? B ZN 301 ? 1_555 NE2 ? A HIS 185 ? B HIS 217 ? 1_555 106.7 ? 3 SG ? A CYS 171 ? B CYS 203 ? 1_555 ZN ? C ZN . ? B ZN 301 ? 1_555 NE2 ? A HIS 185 ? B HIS 217 ? 1_555 110.4 ? 4 SG ? A CYS 168 ? B CYS 200 ? 1_555 ZN ? C ZN . ? B ZN 301 ? 1_555 OE1 ? A GLU 189 ? B GLU 221 ? 1_555 115.5 ? 5 SG ? A CYS 171 ? B CYS 203 ? 1_555 ZN ? C ZN . ? B ZN 301 ? 1_555 OE1 ? A GLU 189 ? B GLU 221 ? 1_555 103.2 ? 6 NE2 ? A HIS 185 ? B HIS 217 ? 1_555 ZN ? C ZN . ? B ZN 301 ? 1_555 OE1 ? A GLU 189 ? B GLU 221 ? 1_555 101.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-06-03 2 'Structure model' 1 1 2015-06-10 3 'Structure model' 1 2 2015-07-22 4 'Structure model' 1 3 2016-07-27 5 'Structure model' 1 4 2017-09-13 6 'Structure model' 1 5 2019-12-25 7 'Structure model' 1 6 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' 'Author supporting evidence' 5 5 'Structure model' 'Derived calculations' 6 6 'Structure model' 'Author supporting evidence' 7 7 'Structure model' 'Data collection' 8 7 'Structure model' 'Database references' 9 7 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' pdbx_audit_support 2 5 'Structure model' pdbx_struct_oper_list 3 6 'Structure model' pdbx_audit_support 4 7 'Structure model' chem_comp_atom 5 7 'Structure model' chem_comp_bond 6 7 'Structure model' database_2 7 7 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_pdbx_audit_support.funding_organization' 2 5 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 3 6 'Structure model' '_pdbx_audit_support.funding_organization' 4 7 'Structure model' '_database_2.pdbx_DOI' 5 7 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -24.5852 83.6782 32.5301 0.5098 ? 0.0022 ? 0.0531 ? 0.5001 ? -0.0354 ? 0.4986 ? 0.1932 ? 0.0896 ? -0.0477 ? 0.0455 ? -0.0385 ? 0.0452 ? -0.1485 ? -0.3948 ? 0.1029 ? 0.4580 ? 0.4075 ? 0.5016 ? -0.5458 ? -0.2828 ? 0.0003 ? 2 'X-RAY DIFFRACTION' ? refined -19.4256 73.5162 28.5211 0.3056 ? -0.0447 ? -0.0039 ? 0.4451 ? -0.0077 ? 0.2721 ? 0.7508 ? -0.3538 ? -0.2513 ? 0.8964 ? -0.3089 ? 0.8682 ? 0.0977 ? -0.2568 ? 0.1437 ? 0.1328 ? -0.0320 ? 0.0291 ? -0.1444 ? -0.1007 ? -0.0001 ? 3 'X-RAY DIFFRACTION' ? refined -13.5006 90.0854 23.8774 0.4091 ? -0.1788 ? -0.0265 ? 0.3274 ? -0.0716 ? 0.4206 ? 1.5102 ? -0.0354 ? 0.2598 ? 2.2503 ? 0.0358 ? 0.1069 ? 0.0264 ? -0.1432 ? 1.0452 ? -0.2540 ? -0.0427 ? -0.2198 ? -0.7039 ? 0.3128 ? 0.1631 ? 4 'X-RAY DIFFRACTION' ? refined -11.0364 71.8881 20.5309 0.2722 ? 0.0267 ? 0.0175 ? 0.4628 ? 0.0316 ? 0.3569 ? 0.4332 ? -0.3556 ? 0.1157 ? 0.8525 ? 0.4185 ? 1.1491 ? -0.0223 ? 0.0325 ? -0.0378 ? -0.0770 ? 0.0676 ? -0.2125 ? 0.2703 ? 0.2766 ? 0.0135 ? 5 'X-RAY DIFFRACTION' ? refined -16.8006 61.2750 12.5791 0.4374 ? 0.0340 ? 0.0533 ? 0.3913 ? -0.0186 ? 0.4400 ? 0.8460 ? -0.8911 ? 0.2571 ? 1.0797 ? -0.2392 ? 1.1341 ? -0.1199 ? 0.5095 ? -0.3042 ? -0.1676 ? -0.1196 ? -0.0640 ? 0.6860 ? 0.4076 ? 0.0035 ? 6 'X-RAY DIFFRACTION' ? refined -23.6180 79.8705 15.0257 0.2543 ? -0.0424 ? 0.0058 ? 0.3257 ? -0.0242 ? 0.2939 ? 0.3879 ? 0.4144 ? 0.3041 ? 1.0559 ? -0.1170 ? 0.3866 ? -0.1175 ? -0.1060 ? 0.0118 ? -0.1616 ? 0.0665 ? 0.0801 ? -0.0302 ? -0.0180 ? 0.0042 ? 7 'X-RAY DIFFRACTION' ? refined -27.6149 90.4102 9.1605 0.5332 ? 0.1064 ? -0.1033 ? 0.3700 ? 0.0593 ? 0.6617 ? 0.0047 ? -0.0219 ? -0.0263 ? 0.0426 ? 0.1152 ? 0.3248 ? -0.1847 ? 0.0208 ? 0.3358 ? 0.1315 ? -0.3041 ? 0.2034 ? -0.3077 ? -0.8935 ? 0.0024 ? 8 'X-RAY DIFFRACTION' ? refined -31.6646 69.4793 4.9807 0.4047 ? -0.0244 ? -0.0312 ? 0.3801 ? -0.0235 ? 0.3012 ? 2.2191 ? 0.0250 ? 0.2155 ? 0.9970 ? -0.2549 ? 0.4928 ? 0.1008 ? 0.5466 ? -0.0557 ? -0.5701 ? -0.1217 ? 0.1765 ? 0.0565 ? 0.0362 ? -0.1601 ? 9 'X-RAY DIFFRACTION' ? refined -48.0335 81.5460 18.5756 0.4491 ? 0.0109 ? -0.0396 ? 0.2672 ? 0.0978 ? 0.7233 ? 1.1028 ? 0.1115 ? -0.3602 ? 0.1510 ? -0.4800 ? 0.5748 ? 0.2800 ? -0.5688 ? 0.5570 ? -0.2875 ? 0.2582 ? 0.4736 ? -0.6286 ? 0.1215 ? 0.1565 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 33 through 43 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 44 through 76 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 77 through 93 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 94 through 119 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 120 through 132 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 133 through 183 ) ; 7 'X-RAY DIFFRACTION' 7 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 184 through 195 ) ; 8 'X-RAY DIFFRACTION' 8 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 196 through 230 ) ; 9 'X-RAY DIFFRACTION' 9 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 1 through 10 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(phenix.refine: 1.8.4_1496)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 N1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 DA _pdbx_validate_symm_contact.auth_seq_id_1 3 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 N6 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 DA _pdbx_validate_symm_contact.auth_seq_id_2 8 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 6_556 _pdbx_validate_symm_contact.dist 2.19 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 DA _pdbx_validate_rmsd_bond.auth_seq_id_1 3 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 DA _pdbx_validate_rmsd_bond.auth_seq_id_2 3 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.381 _pdbx_validate_rmsd_bond.bond_target_value 1.419 _pdbx_validate_rmsd_bond.bond_deviation -0.038 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 DT _pdbx_validate_rmsd_angle.auth_seq_id_1 7 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 DT _pdbx_validate_rmsd_angle.auth_seq_id_2 7 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 DT _pdbx_validate_rmsd_angle.auth_seq_id_3 7 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.94 _pdbx_validate_rmsd_angle.angle_target_value 108.30 _pdbx_validate_rmsd_angle.angle_deviation 8.64 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP B 55 ? ? -139.85 -159.57 2 1 LEU B 120 ? ? -109.27 -69.81 3 1 SER B 157 ? ? -171.44 136.86 4 1 THR B 186 ? ? -179.76 138.48 5 1 SER B 192 ? ? -150.10 0.79 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B ARG 187 ? CZ ? A ARG 155 CZ 2 1 Y 1 B ARG 187 ? NH1 ? A ARG 155 NH1 3 1 Y 1 B ARG 187 ? NH2 ? A ARG 155 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLY 188 ? A GLY 156 2 1 Y 1 B THR 189 ? A THR 157 3 1 Y 1 B LEU 190 ? A LEU 158 4 1 Y 1 B SER 231 ? A SER 199 5 1 Y 1 B MET 232 ? A MET 200 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DG OP3 O N N 159 DG P P N N 160 DG OP1 O N N 161 DG OP2 O N N 162 DG "O5'" O N N 163 DG "C5'" C N N 164 DG "C4'" C N R 165 DG "O4'" O N N 166 DG "C3'" C N S 167 DG "O3'" O N N 168 DG "C2'" C N N 169 DG "C1'" C N R 170 DG N9 N Y N 171 DG C8 C Y N 172 DG N7 N Y N 173 DG C5 C Y N 174 DG C6 C N N 175 DG O6 O N N 176 DG N1 N N N 177 DG C2 C N N 178 DG N2 N N N 179 DG N3 N N N 180 DG C4 C Y N 181 DG HOP3 H N N 182 DG HOP2 H N N 183 DG "H5'" H N N 184 DG "H5''" H N N 185 DG "H4'" H N N 186 DG "H3'" H N N 187 DG "HO3'" H N N 188 DG "H2'" H N N 189 DG "H2''" H N N 190 DG "H1'" H N N 191 DG H8 H N N 192 DG H1 H N N 193 DG H21 H N N 194 DG H22 H N N 195 DT OP3 O N N 196 DT P P N N 197 DT OP1 O N N 198 DT OP2 O N N 199 DT "O5'" O N N 200 DT "C5'" C N N 201 DT "C4'" C N R 202 DT "O4'" O N N 203 DT "C3'" C N S 204 DT "O3'" O N N 205 DT "C2'" C N N 206 DT "C1'" C N R 207 DT N1 N N N 208 DT C2 C N N 209 DT O2 O N N 210 DT N3 N N N 211 DT C4 C N N 212 DT O4 O N N 213 DT C5 C N N 214 DT C7 C N N 215 DT C6 C N N 216 DT HOP3 H N N 217 DT HOP2 H N N 218 DT "H5'" H N N 219 DT "H5''" H N N 220 DT "H4'" H N N 221 DT "H3'" H N N 222 DT "HO3'" H N N 223 DT "H2'" H N N 224 DT "H2''" H N N 225 DT "H1'" H N N 226 DT H3 H N N 227 DT H71 H N N 228 DT H72 H N N 229 DT H73 H N N 230 DT H6 H N N 231 GLN N N N N 232 GLN CA C N S 233 GLN C C N N 234 GLN O O N N 235 GLN CB C N N 236 GLN CG C N N 237 GLN CD C N N 238 GLN OE1 O N N 239 GLN NE2 N N N 240 GLN OXT O N N 241 GLN H H N N 242 GLN H2 H N N 243 GLN HA H N N 244 GLN HB2 H N N 245 GLN HB3 H N N 246 GLN HG2 H N N 247 GLN HG3 H N N 248 GLN HE21 H N N 249 GLN HE22 H N N 250 GLN HXT H N N 251 GLU N N N N 252 GLU CA C N S 253 GLU C C N N 254 GLU O O N N 255 GLU CB C N N 256 GLU CG C N N 257 GLU CD C N N 258 GLU OE1 O N N 259 GLU OE2 O N N 260 GLU OXT O N N 261 GLU H H N N 262 GLU H2 H N N 263 GLU HA H N N 264 GLU HB2 H N N 265 GLU HB3 H N N 266 GLU HG2 H N N 267 GLU HG3 H N N 268 GLU HE2 H N N 269 GLU HXT H N N 270 GLY N N N N 271 GLY CA C N N 272 GLY C C N N 273 GLY O O N N 274 GLY OXT O N N 275 GLY H H N N 276 GLY H2 H N N 277 GLY HA2 H N N 278 GLY HA3 H N N 279 GLY HXT H N N 280 GMP "O5'" O N N 281 GMP "C5'" C N N 282 GMP "C4'" C N R 283 GMP "O4'" O N N 284 GMP "C3'" C N S 285 GMP "O3'" O N N 286 GMP "C2'" C N R 287 GMP "O2'" O N N 288 GMP "C1'" C N R 289 GMP N9 N Y N 290 GMP C8 C Y N 291 GMP N7 N Y N 292 GMP C5 C Y N 293 GMP C6 C N N 294 GMP O6 O N N 295 GMP N1 N N N 296 GMP C2 C N N 297 GMP N2 N N N 298 GMP N3 N N N 299 GMP C4 C Y N 300 GMP "HO5'" H N N 301 GMP "H5'1" H N N 302 GMP "H5'2" H N N 303 GMP "H4'" H N N 304 GMP "H3'" H N N 305 GMP "HO3'" H N N 306 GMP "H2'" H N N 307 GMP "HO2'" H N N 308 GMP "H1'" H N N 309 GMP H8 H N N 310 GMP HN1 H N N 311 GMP HN21 H N N 312 GMP HN22 H N N 313 GOL C1 C N N 314 GOL O1 O N N 315 GOL C2 C N N 316 GOL O2 O N N 317 GOL C3 C N N 318 GOL O3 O N N 319 GOL H11 H N N 320 GOL H12 H N N 321 GOL HO1 H N N 322 GOL H2 H N N 323 GOL HO2 H N N 324 GOL H31 H N N 325 GOL H32 H N N 326 GOL HO3 H N N 327 HIS N N N N 328 HIS CA C N S 329 HIS C C N N 330 HIS O O N N 331 HIS CB C N N 332 HIS CG C Y N 333 HIS ND1 N Y N 334 HIS CD2 C Y N 335 HIS CE1 C Y N 336 HIS NE2 N Y N 337 HIS OXT O N N 338 HIS H H N N 339 HIS H2 H N N 340 HIS HA H N N 341 HIS HB2 H N N 342 HIS HB3 H N N 343 HIS HD1 H N N 344 HIS HD2 H N N 345 HIS HE1 H N N 346 HIS HE2 H N N 347 HIS HXT H N N 348 HOH O O N N 349 HOH H1 H N N 350 HOH H2 H N N 351 ILE N N N N 352 ILE CA C N S 353 ILE C C N N 354 ILE O O N N 355 ILE CB C N S 356 ILE CG1 C N N 357 ILE CG2 C N N 358 ILE CD1 C N N 359 ILE OXT O N N 360 ILE H H N N 361 ILE H2 H N N 362 ILE HA H N N 363 ILE HB H N N 364 ILE HG12 H N N 365 ILE HG13 H N N 366 ILE HG21 H N N 367 ILE HG22 H N N 368 ILE HG23 H N N 369 ILE HD11 H N N 370 ILE HD12 H N N 371 ILE HD13 H N N 372 ILE HXT H N N 373 LEU N N N N 374 LEU CA C N S 375 LEU C C N N 376 LEU O O N N 377 LEU CB C N N 378 LEU CG C N N 379 LEU CD1 C N N 380 LEU CD2 C N N 381 LEU OXT O N N 382 LEU H H N N 383 LEU H2 H N N 384 LEU HA H N N 385 LEU HB2 H N N 386 LEU HB3 H N N 387 LEU HG H N N 388 LEU HD11 H N N 389 LEU HD12 H N N 390 LEU HD13 H N N 391 LEU HD21 H N N 392 LEU HD22 H N N 393 LEU HD23 H N N 394 LEU HXT H N N 395 LYS N N N N 396 LYS CA C N S 397 LYS C C N N 398 LYS O O N N 399 LYS CB C N N 400 LYS CG C N N 401 LYS CD C N N 402 LYS CE C N N 403 LYS NZ N N N 404 LYS OXT O N N 405 LYS H H N N 406 LYS H2 H N N 407 LYS HA H N N 408 LYS HB2 H N N 409 LYS HB3 H N N 410 LYS HG2 H N N 411 LYS HG3 H N N 412 LYS HD2 H N N 413 LYS HD3 H N N 414 LYS HE2 H N N 415 LYS HE3 H N N 416 LYS HZ1 H N N 417 LYS HZ2 H N N 418 LYS HZ3 H N N 419 LYS HXT H N N 420 MET N N N N 421 MET CA C N S 422 MET C C N N 423 MET O O N N 424 MET CB C N N 425 MET CG C N N 426 MET SD S N N 427 MET CE C N N 428 MET OXT O N N 429 MET H H N N 430 MET H2 H N N 431 MET HA H N N 432 MET HB2 H N N 433 MET HB3 H N N 434 MET HG2 H N N 435 MET HG3 H N N 436 MET HE1 H N N 437 MET HE2 H N N 438 MET HE3 H N N 439 MET HXT H N N 440 PHE N N N N 441 PHE CA C N S 442 PHE C C N N 443 PHE O O N N 444 PHE CB C N N 445 PHE CG C Y N 446 PHE CD1 C Y N 447 PHE CD2 C Y N 448 PHE CE1 C Y N 449 PHE CE2 C Y N 450 PHE CZ C Y N 451 PHE OXT O N N 452 PHE H H N N 453 PHE H2 H N N 454 PHE HA H N N 455 PHE HB2 H N N 456 PHE HB3 H N N 457 PHE HD1 H N N 458 PHE HD2 H N N 459 PHE HE1 H N N 460 PHE HE2 H N N 461 PHE HZ H N N 462 PHE HXT H N N 463 PRO N N N N 464 PRO CA C N S 465 PRO C C N N 466 PRO O O N N 467 PRO CB C N N 468 PRO CG C N N 469 PRO CD C N N 470 PRO OXT O N N 471 PRO H H N N 472 PRO HA H N N 473 PRO HB2 H N N 474 PRO HB3 H N N 475 PRO HG2 H N N 476 PRO HG3 H N N 477 PRO HD2 H N N 478 PRO HD3 H N N 479 PRO HXT H N N 480 SER N N N N 481 SER CA C N S 482 SER C C N N 483 SER O O N N 484 SER CB C N N 485 SER OG O N N 486 SER OXT O N N 487 SER H H N N 488 SER H2 H N N 489 SER HA H N N 490 SER HB2 H N N 491 SER HB3 H N N 492 SER HG H N N 493 SER HXT H N N 494 THR N N N N 495 THR CA C N S 496 THR C C N N 497 THR O O N N 498 THR CB C N R 499 THR OG1 O N N 500 THR CG2 C N N 501 THR OXT O N N 502 THR H H N N 503 THR H2 H N N 504 THR HA H N N 505 THR HB H N N 506 THR HG1 H N N 507 THR HG21 H N N 508 THR HG22 H N N 509 THR HG23 H N N 510 THR HXT H N N 511 TRP N N N N 512 TRP CA C N S 513 TRP C C N N 514 TRP O O N N 515 TRP CB C N N 516 TRP CG C Y N 517 TRP CD1 C Y N 518 TRP CD2 C Y N 519 TRP NE1 N Y N 520 TRP CE2 C Y N 521 TRP CE3 C Y N 522 TRP CZ2 C Y N 523 TRP CZ3 C Y N 524 TRP CH2 C Y N 525 TRP OXT O N N 526 TRP H H N N 527 TRP H2 H N N 528 TRP HA H N N 529 TRP HB2 H N N 530 TRP HB3 H N N 531 TRP HD1 H N N 532 TRP HE1 H N N 533 TRP HE3 H N N 534 TRP HZ2 H N N 535 TRP HZ3 H N N 536 TRP HH2 H N N 537 TRP HXT H N N 538 TYR N N N N 539 TYR CA C N S 540 TYR C C N N 541 TYR O O N N 542 TYR CB C N N 543 TYR CG C Y N 544 TYR CD1 C Y N 545 TYR CD2 C Y N 546 TYR CE1 C Y N 547 TYR CE2 C Y N 548 TYR CZ C Y N 549 TYR OH O N N 550 TYR OXT O N N 551 TYR H H N N 552 TYR H2 H N N 553 TYR HA H N N 554 TYR HB2 H N N 555 TYR HB3 H N N 556 TYR HD1 H N N 557 TYR HD2 H N N 558 TYR HE1 H N N 559 TYR HE2 H N N 560 TYR HH H N N 561 TYR HXT H N N 562 VAL N N N N 563 VAL CA C N S 564 VAL C C N N 565 VAL O O N N 566 VAL CB C N N 567 VAL CG1 C N N 568 VAL CG2 C N N 569 VAL OXT O N N 570 VAL H H N N 571 VAL H2 H N N 572 VAL HA H N N 573 VAL HB H N N 574 VAL HG11 H N N 575 VAL HG12 H N N 576 VAL HG13 H N N 577 VAL HG21 H N N 578 VAL HG22 H N N 579 VAL HG23 H N N 580 VAL HXT H N N 581 ZN ZN ZN N N 582 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 GMP "O5'" "C5'" sing N N 278 GMP "O5'" "HO5'" sing N N 279 GMP "C5'" "C4'" sing N N 280 GMP "C5'" "H5'1" sing N N 281 GMP "C5'" "H5'2" sing N N 282 GMP "C4'" "O4'" sing N N 283 GMP "C4'" "C3'" sing N N 284 GMP "C4'" "H4'" sing N N 285 GMP "O4'" "C1'" sing N N 286 GMP "C3'" "O3'" sing N N 287 GMP "C3'" "C2'" sing N N 288 GMP "C3'" "H3'" sing N N 289 GMP "O3'" "HO3'" sing N N 290 GMP "C2'" "O2'" sing N N 291 GMP "C2'" "C1'" sing N N 292 GMP "C2'" "H2'" sing N N 293 GMP "O2'" "HO2'" sing N N 294 GMP "C1'" N9 sing N N 295 GMP "C1'" "H1'" sing N N 296 GMP N9 C8 sing Y N 297 GMP N9 C4 sing Y N 298 GMP C8 N7 doub Y N 299 GMP C8 H8 sing N N 300 GMP N7 C5 sing Y N 301 GMP C5 C6 sing N N 302 GMP C5 C4 doub Y N 303 GMP C6 O6 doub N N 304 GMP C6 N1 sing N N 305 GMP N1 C2 sing N N 306 GMP N1 HN1 sing N N 307 GMP C2 N2 sing N N 308 GMP C2 N3 doub N N 309 GMP N2 HN21 sing N N 310 GMP N2 HN22 sing N N 311 GMP N3 C4 sing N N 312 GOL C1 O1 sing N N 313 GOL C1 C2 sing N N 314 GOL C1 H11 sing N N 315 GOL C1 H12 sing N N 316 GOL O1 HO1 sing N N 317 GOL C2 O2 sing N N 318 GOL C2 C3 sing N N 319 GOL C2 H2 sing N N 320 GOL O2 HO2 sing N N 321 GOL C3 O3 sing N N 322 GOL C3 H31 sing N N 323 GOL C3 H32 sing N N 324 GOL O3 HO3 sing N N 325 HIS N CA sing N N 326 HIS N H sing N N 327 HIS N H2 sing N N 328 HIS CA C sing N N 329 HIS CA CB sing N N 330 HIS CA HA sing N N 331 HIS C O doub N N 332 HIS C OXT sing N N 333 HIS CB CG sing N N 334 HIS CB HB2 sing N N 335 HIS CB HB3 sing N N 336 HIS CG ND1 sing Y N 337 HIS CG CD2 doub Y N 338 HIS ND1 CE1 doub Y N 339 HIS ND1 HD1 sing N N 340 HIS CD2 NE2 sing Y N 341 HIS CD2 HD2 sing N N 342 HIS CE1 NE2 sing Y N 343 HIS CE1 HE1 sing N N 344 HIS NE2 HE2 sing N N 345 HIS OXT HXT sing N N 346 HOH O H1 sing N N 347 HOH O H2 sing N N 348 ILE N CA sing N N 349 ILE N H sing N N 350 ILE N H2 sing N N 351 ILE CA C sing N N 352 ILE CA CB sing N N 353 ILE CA HA sing N N 354 ILE C O doub N N 355 ILE C OXT sing N N 356 ILE CB CG1 sing N N 357 ILE CB CG2 sing N N 358 ILE CB HB sing N N 359 ILE CG1 CD1 sing N N 360 ILE CG1 HG12 sing N N 361 ILE CG1 HG13 sing N N 362 ILE CG2 HG21 sing N N 363 ILE CG2 HG22 sing N N 364 ILE CG2 HG23 sing N N 365 ILE CD1 HD11 sing N N 366 ILE CD1 HD12 sing N N 367 ILE CD1 HD13 sing N N 368 ILE OXT HXT sing N N 369 LEU N CA sing N N 370 LEU N H sing N N 371 LEU N H2 sing N N 372 LEU CA C sing N N 373 LEU CA CB sing N N 374 LEU CA HA sing N N 375 LEU C O doub N N 376 LEU C OXT sing N N 377 LEU CB CG sing N N 378 LEU CB HB2 sing N N 379 LEU CB HB3 sing N N 380 LEU CG CD1 sing N N 381 LEU CG CD2 sing N N 382 LEU CG HG sing N N 383 LEU CD1 HD11 sing N N 384 LEU CD1 HD12 sing N N 385 LEU CD1 HD13 sing N N 386 LEU CD2 HD21 sing N N 387 LEU CD2 HD22 sing N N 388 LEU CD2 HD23 sing N N 389 LEU OXT HXT sing N N 390 LYS N CA sing N N 391 LYS N H sing N N 392 LYS N H2 sing N N 393 LYS CA C sing N N 394 LYS CA CB sing N N 395 LYS CA HA sing N N 396 LYS C O doub N N 397 LYS C OXT sing N N 398 LYS CB CG sing N N 399 LYS CB HB2 sing N N 400 LYS CB HB3 sing N N 401 LYS CG CD sing N N 402 LYS CG HG2 sing N N 403 LYS CG HG3 sing N N 404 LYS CD CE sing N N 405 LYS CD HD2 sing N N 406 LYS CD HD3 sing N N 407 LYS CE NZ sing N N 408 LYS CE HE2 sing N N 409 LYS CE HE3 sing N N 410 LYS NZ HZ1 sing N N 411 LYS NZ HZ2 sing N N 412 LYS NZ HZ3 sing N N 413 LYS OXT HXT sing N N 414 MET N CA sing N N 415 MET N H sing N N 416 MET N H2 sing N N 417 MET CA C sing N N 418 MET CA CB sing N N 419 MET CA HA sing N N 420 MET C O doub N N 421 MET C OXT sing N N 422 MET CB CG sing N N 423 MET CB HB2 sing N N 424 MET CB HB3 sing N N 425 MET CG SD sing N N 426 MET CG HG2 sing N N 427 MET CG HG3 sing N N 428 MET SD CE sing N N 429 MET CE HE1 sing N N 430 MET CE HE2 sing N N 431 MET CE HE3 sing N N 432 MET OXT HXT sing N N 433 PHE N CA sing N N 434 PHE N H sing N N 435 PHE N H2 sing N N 436 PHE CA C sing N N 437 PHE CA CB sing N N 438 PHE CA HA sing N N 439 PHE C O doub N N 440 PHE C OXT sing N N 441 PHE CB CG sing N N 442 PHE CB HB2 sing N N 443 PHE CB HB3 sing N N 444 PHE CG CD1 doub Y N 445 PHE CG CD2 sing Y N 446 PHE CD1 CE1 sing Y N 447 PHE CD1 HD1 sing N N 448 PHE CD2 CE2 doub Y N 449 PHE CD2 HD2 sing N N 450 PHE CE1 CZ doub Y N 451 PHE CE1 HE1 sing N N 452 PHE CE2 CZ sing Y N 453 PHE CE2 HE2 sing N N 454 PHE CZ HZ sing N N 455 PHE OXT HXT sing N N 456 PRO N CA sing N N 457 PRO N CD sing N N 458 PRO N H sing N N 459 PRO CA C sing N N 460 PRO CA CB sing N N 461 PRO CA HA sing N N 462 PRO C O doub N N 463 PRO C OXT sing N N 464 PRO CB CG sing N N 465 PRO CB HB2 sing N N 466 PRO CB HB3 sing N N 467 PRO CG CD sing N N 468 PRO CG HG2 sing N N 469 PRO CG HG3 sing N N 470 PRO CD HD2 sing N N 471 PRO CD HD3 sing N N 472 PRO OXT HXT sing N N 473 SER N CA sing N N 474 SER N H sing N N 475 SER N H2 sing N N 476 SER CA C sing N N 477 SER CA CB sing N N 478 SER CA HA sing N N 479 SER C O doub N N 480 SER C OXT sing N N 481 SER CB OG sing N N 482 SER CB HB2 sing N N 483 SER CB HB3 sing N N 484 SER OG HG sing N N 485 SER OXT HXT sing N N 486 THR N CA sing N N 487 THR N H sing N N 488 THR N H2 sing N N 489 THR CA C sing N N 490 THR CA CB sing N N 491 THR CA HA sing N N 492 THR C O doub N N 493 THR C OXT sing N N 494 THR CB OG1 sing N N 495 THR CB CG2 sing N N 496 THR CB HB sing N N 497 THR OG1 HG1 sing N N 498 THR CG2 HG21 sing N N 499 THR CG2 HG22 sing N N 500 THR CG2 HG23 sing N N 501 THR OXT HXT sing N N 502 TRP N CA sing N N 503 TRP N H sing N N 504 TRP N H2 sing N N 505 TRP CA C sing N N 506 TRP CA CB sing N N 507 TRP CA HA sing N N 508 TRP C O doub N N 509 TRP C OXT sing N N 510 TRP CB CG sing N N 511 TRP CB HB2 sing N N 512 TRP CB HB3 sing N N 513 TRP CG CD1 doub Y N 514 TRP CG CD2 sing Y N 515 TRP CD1 NE1 sing Y N 516 TRP CD1 HD1 sing N N 517 TRP CD2 CE2 doub Y N 518 TRP CD2 CE3 sing Y N 519 TRP NE1 CE2 sing Y N 520 TRP NE1 HE1 sing N N 521 TRP CE2 CZ2 sing Y N 522 TRP CE3 CZ3 doub Y N 523 TRP CE3 HE3 sing N N 524 TRP CZ2 CH2 doub Y N 525 TRP CZ2 HZ2 sing N N 526 TRP CZ3 CH2 sing Y N 527 TRP CZ3 HZ3 sing N N 528 TRP CH2 HH2 sing N N 529 TRP OXT HXT sing N N 530 TYR N CA sing N N 531 TYR N H sing N N 532 TYR N H2 sing N N 533 TYR CA C sing N N 534 TYR CA CB sing N N 535 TYR CA HA sing N N 536 TYR C O doub N N 537 TYR C OXT sing N N 538 TYR CB CG sing N N 539 TYR CB HB2 sing N N 540 TYR CB HB3 sing N N 541 TYR CG CD1 doub Y N 542 TYR CG CD2 sing Y N 543 TYR CD1 CE1 sing Y N 544 TYR CD1 HD1 sing N N 545 TYR CD2 CE2 doub Y N 546 TYR CD2 HD2 sing N N 547 TYR CE1 CZ doub Y N 548 TYR CE1 HE1 sing N N 549 TYR CE2 CZ sing Y N 550 TYR CE2 HE2 sing N N 551 TYR CZ OH sing N N 552 TYR OH HH sing N N 553 TYR OXT HXT sing N N 554 VAL N CA sing N N 555 VAL N H sing N N 556 VAL N H2 sing N N 557 VAL CA C sing N N 558 VAL CA CB sing N N 559 VAL CA HA sing N N 560 VAL C O doub N N 561 VAL C OXT sing N N 562 VAL CB CG1 sing N N 563 VAL CB CG2 sing N N 564 VAL CB HB sing N N 565 VAL CG1 HG11 sing N N 566 VAL CG1 HG12 sing N N 567 VAL CG1 HG13 sing N N 568 VAL CG2 HG21 sing N N 569 VAL CG2 HG22 sing N N 570 VAL CG2 HG23 sing N N 571 VAL OXT HXT sing N N 572 # _ndb_struct_conf_na.entry_id 4YKL _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 B DC 10 6_556 -0.360 -0.048 -0.272 -22.283 -13.262 1.842 1 A_DG1:DC10_A A 1 ? A 10 ? 19 1 1 B DG 1 1_555 B DC 10 1_555 -0.360 -0.048 -0.272 -22.283 -13.262 1.842 2 A_DG1:DC10_A A 1 ? A 10 ? 19 1 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM46330 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 GUANOSINE GMP 5 GLYCEROL GOL 6 'CHLORIDE ION' CL 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4XBA _pdbx_initial_refinement_model.details ? #