HEADER TRANSFERASE 05-MAR-15 4YL5 TITLE STRUCTURE OF A PUTATIVE PHOSPHOMETHYLPYRIMIDINE KINASE FROM TITLE 2 ACINETOBACTER BAUMANNII COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE PHOSPHOMETHYLPYRIMIDINE KINASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 2-255; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII IS-123; SOURCE 3 ORGANISM_TAXID: 903899; SOURCE 4 GENE: ACINIS123_0279; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS PUTATIVE PHOSPHOMETHYLPYRIMIDINE KINASE, STRUCTURAL GENOMICS, SEATTLE KEYWDS 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID, KEYWDS 3 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 4 29-MAY-24 4YL5 1 JRNL REVDAT 3 27-SEP-23 4YL5 1 REMARK REVDAT 2 22-NOV-17 4YL5 1 SOURCE REMARK REVDAT 1 01-APR-15 4YL5 0 JRNL AUTH H.DE VITTO,K.K.J.BELFON,N.SHARMA,S.TOAY,J.ABENDROTH, JRNL AUTH 2 D.M.DRANOW,C.M.LUKACS,R.CHOI,H.S.UDELL,S.WILLIS,G.BARRERA, JRNL AUTH 3 O.BEYER,T.D.LI,K.A.HICKS,A.T.TORELLI,J.B.FRENCH JRNL TITL CHARACTERIZATION OF AN ACINETOBACTER BAUMANNII JRNL TITL 2 MONOFUNCTIONAL PHOSPHOMETHYLPYRIMIDINE KINASE THAT IS JRNL TITL 3 INHIBITED BY PYRIDOXAL PHOSPHATE. JRNL REF BIOCHEMISTRY 2024 JRNL REFN ISSN 0006-2960 JRNL PMID 38306231 JRNL DOI 10.1021/ACS.BIOCHEM.3C00640 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1965) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 31294 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.177 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.260 REMARK 3 FREE R VALUE TEST SET COUNT : 1647 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.4144 - 3.8893 0.99 2624 136 0.1486 0.1497 REMARK 3 2 3.8893 - 3.0882 1.00 2533 134 0.1522 0.1650 REMARK 3 3 3.0882 - 2.6981 1.00 2524 124 0.1643 0.1943 REMARK 3 4 2.6981 - 2.4515 1.00 2491 130 0.1554 0.1614 REMARK 3 5 2.4515 - 2.2759 1.00 2492 124 0.1457 0.1621 REMARK 3 6 2.2759 - 2.1418 1.00 2498 133 0.1594 0.1653 REMARK 3 7 2.1418 - 2.0345 1.00 2439 151 0.1592 0.1777 REMARK 3 8 2.0345 - 1.9460 1.00 2460 152 0.1732 0.2304 REMARK 3 9 1.9460 - 1.8711 1.00 2442 146 0.1705 0.1956 REMARK 3 10 1.8711 - 1.8065 1.00 2460 133 0.1914 0.2143 REMARK 3 11 1.8065 - 1.7500 0.98 2398 141 0.2103 0.2612 REMARK 3 12 1.7500 - 1.7000 0.93 2286 143 0.2415 0.2655 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1716 REMARK 3 ANGLE : 1.071 2349 REMARK 3 CHIRALITY : 0.056 289 REMARK 3 PLANARITY : 0.005 306 REMARK 3 DIHEDRAL : 13.333 614 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 9:90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.1559 31.7813 28.1272 REMARK 3 T TENSOR REMARK 3 T11: 0.1208 T22: 0.1132 REMARK 3 T33: 0.1064 T12: 0.0061 REMARK 3 T13: -0.0004 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 2.4277 L22: 1.9136 REMARK 3 L33: 2.9153 L12: 0.2814 REMARK 3 L13: 0.4003 L23: 0.3308 REMARK 3 S TENSOR REMARK 3 S11: 0.1099 S12: -0.0238 S13: -0.0059 REMARK 3 S21: -0.0033 S22: -0.0157 S23: -0.0119 REMARK 3 S31: 0.0376 S32: 0.0206 S33: -0.0775 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 91:158 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7452 29.1926 42.2032 REMARK 3 T TENSOR REMARK 3 T11: 0.1715 T22: 0.1426 REMARK 3 T33: 0.1402 T12: -0.0169 REMARK 3 T13: -0.0232 T23: 0.0221 REMARK 3 L TENSOR REMARK 3 L11: 2.2972 L22: 1.1195 REMARK 3 L33: 2.7498 L12: 0.0695 REMARK 3 L13: -1.3728 L23: 0.5815 REMARK 3 S TENSOR REMARK 3 S11: 0.0440 S12: -0.0812 S13: -0.0627 REMARK 3 S21: 0.1295 S22: -0.0075 S23: 0.0358 REMARK 3 S31: 0.2406 S32: -0.0355 S33: -0.0253 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 159:186 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.7372 39.8581 51.0933 REMARK 3 T TENSOR REMARK 3 T11: 0.2738 T22: 0.2379 REMARK 3 T33: 0.2536 T12: -0.0715 REMARK 3 T13: 0.0492 T23: -0.0489 REMARK 3 L TENSOR REMARK 3 L11: 3.6826 L22: 7.9536 REMARK 3 L33: 5.7563 L12: -2.0160 REMARK 3 L13: 1.2001 L23: -3.2607 REMARK 3 S TENSOR REMARK 3 S11: 0.1158 S12: -0.4538 S13: 0.2788 REMARK 3 S21: 0.4674 S22: 0.1728 S23: 0.6173 REMARK 3 S31: -0.4347 S32: -0.3677 S33: -0.2558 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 187:217 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.8553 46.0199 47.5330 REMARK 3 T TENSOR REMARK 3 T11: 0.2522 T22: 0.2017 REMARK 3 T33: 0.3502 T12: -0.0475 REMARK 3 T13: 0.0641 T23: -0.0654 REMARK 3 L TENSOR REMARK 3 L11: 7.3883 L22: 9.5378 REMARK 3 L33: 5.1830 L12: -1.7834 REMARK 3 L13: -1.4636 L23: -0.4095 REMARK 3 S TENSOR REMARK 3 S11: 0.2076 S12: -0.3743 S13: 0.5484 REMARK 3 S21: 0.4287 S22: -0.1971 S23: 0.5637 REMARK 3 S31: -0.3779 S32: -0.6329 S33: -0.0376 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 218:245 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.8153 48.6060 37.5943 REMARK 3 T TENSOR REMARK 3 T11: 0.2102 T22: 0.1342 REMARK 3 T33: 0.2132 T12: -0.0428 REMARK 3 T13: 0.0415 T23: -0.0590 REMARK 3 L TENSOR REMARK 3 L11: 2.7737 L22: 1.1972 REMARK 3 L33: 3.9002 L12: 0.3794 REMARK 3 L13: 1.1285 L23: 0.7736 REMARK 3 S TENSOR REMARK 3 S11: -0.0307 S12: -0.1924 S13: 0.4488 REMARK 3 S21: -0.0510 S22: 0.0203 S23: 0.0238 REMARK 3 S31: -0.2475 S32: -0.0670 S33: 0.0299 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YL5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000207637. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31307 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.03700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.9400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.40900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.390 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES, PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4C51 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MICROLYTICS MGSC1 SCREEN, C8: 25% PEG REMARK 280 4000, 200MM AMMONIUM CITRATE, 100MM NA CITRATE/HCL, PH 5.6; REMARK 280 ACBAC.00867.A.B1.PW37632 AT 22 MG/ML, TRAY 261062, PUCK PMA4-8; REMARK 280 CRYO: 20% EG, PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.44000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.44000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 29.41000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.05000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 29.41000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.05000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.44000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 29.41000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 54.05000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.44000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 29.41000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 54.05000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 44.44000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 406 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 415 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 ARG A 205 REMARK 465 LEU A 206 REMARK 465 GLU A 207 REMARK 465 GLY A 208 REMARK 465 GLU A 209 REMARK 465 TYR A 210 REMARK 465 HIS A 211 REMARK 465 GLY A 212 REMARK 465 SER A 213 REMARK 465 GLY A 214 REMARK 465 LEU A 246 REMARK 465 LYS A 247 REMARK 465 ASN A 248 REMARK 465 ALA A 249 REMARK 465 GLU A 250 REMARK 465 THR A 251 REMARK 465 PRO A 252 REMARK 465 VAL A 253 REMARK 465 LEU A 254 REMARK 465 ASN A 255 REMARK 465 GLY A 256 REMARK 465 GLN A 257 REMARK 465 LYS A 258 REMARK 465 ILE A 259 REMARK 465 PRO A 260 REMARK 465 LYS A 261 REMARK 465 ARG A 262 REMARK 465 PHE A 263 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 131 CG CD CE NZ REMARK 470 ILE A 187 CG1 CG2 CD1 REMARK 470 LYS A 188 CG CD CE NZ REMARK 470 PHE A 243 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL A 245 CB CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 47 144.05 -171.41 REMARK 500 THR A 144 66.61 -119.96 REMARK 500 CYS A 203 117.12 -169.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-ACBAC.00867.A RELATED DB: TARGETTRACK DBREF 4YL5 A 10 263 UNP J5A2R3 J5A2R3_ACIBA 2 255 SEQADV 4YL5 MET A 1 UNP J5A2R3 EXPRESSION TAG SEQADV 4YL5 ALA A 2 UNP J5A2R3 EXPRESSION TAG SEQADV 4YL5 HIS A 3 UNP J5A2R3 EXPRESSION TAG SEQADV 4YL5 HIS A 4 UNP J5A2R3 EXPRESSION TAG SEQADV 4YL5 HIS A 5 UNP J5A2R3 EXPRESSION TAG SEQADV 4YL5 HIS A 6 UNP J5A2R3 EXPRESSION TAG SEQADV 4YL5 HIS A 7 UNP J5A2R3 EXPRESSION TAG SEQADV 4YL5 HIS A 8 UNP J5A2R3 EXPRESSION TAG SEQADV 4YL5 VAL A 9 UNP J5A2R3 EXPRESSION TAG SEQRES 1 A 263 MET ALA HIS HIS HIS HIS HIS HIS VAL ARG PRO THR VAL SEQRES 2 A 263 LEU CYS PHE SER GLY LEU ASP PRO SER GLY GLY ALA GLY SEQRES 3 A 263 LEU GLN ALA ASP ILE GLU ALA ILE GLY GLN SER GLY ALA SEQRES 4 A 263 HIS ALA ALA ILE ALA CYS THR ALA LEU THR ILE GLN ASN SEQRES 5 A 263 SER GLN GLN VAL PHE GLY PHE GLU ALA THR SER LYS GLU SEQRES 6 A 263 LEU LEU LEU ALA GLN ALA ASN ALA VAL VAL GLY ASP LEU SEQRES 7 A 263 PRO ILE LYS CYS VAL LYS SER GLY MET LEU GLY THR THR SEQRES 8 A 263 ASP ASN ILE ALA ALA LEU ALA GLU PHE LEU ARG ALA HIS SEQRES 9 A 263 PRO ASP TYR GLN TYR VAL LEU ASP PRO VAL LEU VAL ALA SEQRES 10 A 263 ASN SER GLY GLY SER LEU GLY ASP GLN ALA THR LEU VAL SEQRES 11 A 263 LYS ALA PHE VAL GLU LEU ILE PRO LEU ALA THR LEU ILE SEQRES 12 A 263 THR PRO ASN THR VAL GLU LEU ARG ALA LEU THR GLY VAL SEQRES 13 A 263 THR ASP LEU ASP GLN ALA THR GLN LYS LEU PHE GLU MET SEQRES 14 A 263 GLY ALA LYS ALA VAL LEU VAL LYS GLY GLY HIS GLU ASP SEQRES 15 A 263 THR PRO ASP PHE ILE LYS ASN SER LEU TYR ILE ASP GLY SEQRES 16 A 263 GLU LEU ALA ALA SER SER THR CYS PRO ARG LEU GLU GLY SEQRES 17 A 263 GLU TYR HIS GLY SER GLY CYS SER LEU ALA SER PHE ILE SEQRES 18 A 263 ALA GLY ARG LEU ALA LEU GLY ASP SER LEU LYS ILE ALA SEQRES 19 A 263 VAL GLN HIS ALA GLU THR TRP LEU PHE GLY VAL LEU LYS SEQRES 20 A 263 ASN ALA GLU THR PRO VAL LEU ASN GLY GLN LYS ILE PRO SEQRES 21 A 263 LYS ARG PHE HET EDO A 300 4 HET EDO A 301 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 2(C2 H6 O2) FORMUL 4 HOH *186(H2 O) HELIX 1 AA1 GLY A 26 GLY A 38 1 13 HELIX 2 AA2 SER A 63 VAL A 75 1 13 HELIX 3 AA3 THR A 90 HIS A 104 1 15 HELIX 4 AA4 ASP A 125 VAL A 134 1 10 HELIX 5 AA5 GLU A 135 ALA A 140 5 6 HELIX 6 AA6 ASN A 146 GLY A 155 1 10 HELIX 7 AA7 ASP A 158 MET A 169 1 12 HELIX 8 AA8 LEU A 217 LEU A 227 1 11 HELIX 9 AA9 SER A 230 PHE A 243 1 14 SHEET 1 AA1 6 VAL A 56 ALA A 61 0 SHEET 2 AA1 6 HIS A 40 GLN A 51 -1 N ILE A 50 O GLY A 58 SHEET 3 AA1 6 THR A 12 LEU A 19 1 N CYS A 15 O ALA A 44 SHEET 4 AA1 6 ILE A 80 SER A 85 1 O LYS A 84 N PHE A 16 SHEET 5 AA1 6 GLN A 108 LEU A 111 1 O VAL A 110 N VAL A 83 SHEET 6 AA1 6 LEU A 142 ILE A 143 1 O LEU A 142 N LEU A 111 SHEET 1 AA2 3 ALA A 173 LYS A 177 0 SHEET 2 AA2 3 ILE A 187 ILE A 193 -1 O TYR A 192 N VAL A 174 SHEET 3 AA2 3 GLU A 196 CYS A 203 -1 O SER A 201 N ASN A 189 SSBOND 1 CYS A 203 CYS A 215 1555 1555 2.03 SITE 1 AC1 8 GLY A 86 MET A 87 LEU A 88 GLY A 89 SITE 2 AC1 8 VAL A 114 LEU A 123 LEU A 129 PHE A 133 SITE 1 AC2 3 GLN A 51 MET A 87 HOH A 456 CRYST1 58.820 108.100 88.880 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017001 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009251 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011251 0.00000