HEADER TRANSPORT PROTEIN 05-MAR-15 4YLE TITLE CRYSTAL STRUCTURE OF AN ABC TRANSPOTER SOLUTE BINDING PROTEIN TITLE 2 (IPR025997) FROM BURKHOLDERIA MULTIVORANS (BMUL_1631, TARGET EFI- TITLE 3 511115) WITH AN UNKNOWN LIGAND MODELLED AS ALPHA-D-ERYTHROFURANOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC BINDING PROTEIN/LACI TRANSCRIPTIONAL REGULATOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SIMPLE SUGAR TRANSPORT SYSTEM SUBSTRATE-BINDING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA MULTIVORANS; SOURCE 3 ORGANISM_TAXID: 395019; SOURCE 4 STRAIN: ATCC 17616 / 249; SOURCE 5 GENE: BMUL_1631, BMULJ_01611; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS ABC TRANSPORTER SOLUTE BINDING PROTEIN, ENZYME FUNCTION INITIATIVE, KEYWDS 2 EFI, STRUCTURAL GENOMICS, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,N.F.AL OBAIDI,R.TORO,L.L.MORISCO,J.BENACH,J.KOSS, AUTHOR 2 S.R.WASSERMAN,J.D.ATTONITO,A.SCOTT GLENN,S.CHAMALA,S.CHOWDHURY, AUTHOR 3 J.LAFLEUR,J.LOVE,R.D.SEIDEL,K.L.WHALEN,J.A.GERLT,S.C.ALMO,ENZYME AUTHOR 4 FUNCTION INITIATIVE (EFI) REVDAT 3 25-DEC-19 4YLE 1 REMARK REVDAT 2 06-SEP-17 4YLE 1 SOURCE REMARK REVDAT 1 15-APR-15 4YLE 0 JRNL AUTH M.W.VETTING,N.F.AL OBAIDI,R.TORO,L.L.MORISCO,J.BENACH, JRNL AUTH 2 J.KOSS,S.R.WASSERMAN,J.D.ATTONITO,A.SCOTT GLENN,S.CHAMALA, JRNL AUTH 3 S.CHOWDHURY,J.LAFLEUR,J.LOVE,R.D.SEIDEL,K.L.WHALEN, JRNL AUTH 4 J.A.GERLT,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING JRNL TITL 2 PROTEIN (IPR025997) FROM BURKHOLDERIA MULTIVORANS JRNL TITL 3 (BMUL_1631, TARGET EFI-511115) WITH AN UNKNOWN LIGAND JRNL TITL 4 MODELLED AS ALPHA-D-ERYTHROFURANOSE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 28868 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 1409 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.4406 - 3.6596 0.97 2927 161 0.1549 0.1665 REMARK 3 2 3.6596 - 2.9059 1.00 2910 148 0.1680 0.2399 REMARK 3 3 2.9059 - 2.5389 1.00 2839 141 0.1765 0.2209 REMARK 3 4 2.5389 - 2.3070 1.00 2849 132 0.1614 0.2213 REMARK 3 5 2.3070 - 2.1417 0.99 2815 134 0.1735 0.2180 REMARK 3 6 2.1417 - 2.0155 0.98 2749 154 0.1797 0.2134 REMARK 3 7 2.0155 - 1.9146 0.97 2684 135 0.1842 0.2234 REMARK 3 8 1.9146 - 1.8312 0.95 2633 144 0.2047 0.2625 REMARK 3 9 1.8312 - 1.7608 0.91 2569 134 0.2071 0.2870 REMARK 3 10 1.7608 - 1.7000 0.89 2484 126 0.2242 0.2388 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2130 REMARK 3 ANGLE : 1.343 2881 REMARK 3 CHIRALITY : 0.054 345 REMARK 3 PLANARITY : 0.006 375 REMARK 3 DIHEDRAL : 14.413 797 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 30:60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2478 -4.8734 11.3665 REMARK 3 T TENSOR REMARK 3 T11: 0.1745 T22: 0.2000 REMARK 3 T33: 0.2797 T12: 0.0004 REMARK 3 T13: 0.0562 T23: -0.0302 REMARK 3 L TENSOR REMARK 3 L11: 2.6600 L22: 4.9741 REMARK 3 L33: 2.8135 L12: -0.7560 REMARK 3 L13: -0.6356 L23: 2.0789 REMARK 3 S TENSOR REMARK 3 S11: 0.1230 S12: -0.1113 S13: 0.3622 REMARK 3 S21: -0.5192 S22: 0.2271 S23: -0.7114 REMARK 3 S31: -0.1423 S32: 0.3340 S33: -0.3680 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 61:77 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7558 -1.2806 8.3977 REMARK 3 T TENSOR REMARK 3 T11: 0.2563 T22: 0.2159 REMARK 3 T33: 0.4272 T12: -0.0387 REMARK 3 T13: 0.1654 T23: -0.0585 REMARK 3 L TENSOR REMARK 3 L11: 1.3416 L22: 6.6138 REMARK 3 L33: 2.9758 L12: -0.2993 REMARK 3 L13: -0.1952 L23: 1.8133 REMARK 3 S TENSOR REMARK 3 S11: 0.1574 S12: 0.1913 S13: 0.2484 REMARK 3 S21: -0.7978 S22: -0.0763 S23: -0.5303 REMARK 3 S31: -0.2204 S32: -0.0224 S33: -0.0806 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 78:145 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.0263 5.5516 2.1659 REMARK 3 T TENSOR REMARK 3 T11: 0.6616 T22: 0.2355 REMARK 3 T33: 0.3097 T12: 0.0674 REMARK 3 T13: 0.0313 T23: 0.0614 REMARK 3 L TENSOR REMARK 3 L11: 0.5404 L22: 3.0466 REMARK 3 L33: 3.6113 L12: 1.1798 REMARK 3 L13: 0.1678 L23: 0.3520 REMARK 3 S TENSOR REMARK 3 S11: -0.0641 S12: 0.3455 S13: 0.4228 REMARK 3 S21: -1.4078 S22: -0.0327 S23: -0.0081 REMARK 3 S31: -1.0240 S32: -0.1486 S33: 0.0088 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 146:193 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.3401 7.8191 26.9741 REMARK 3 T TENSOR REMARK 3 T11: 0.1377 T22: 0.2794 REMARK 3 T33: 0.2003 T12: 0.0357 REMARK 3 T13: -0.0042 T23: -0.0786 REMARK 3 L TENSOR REMARK 3 L11: 2.9513 L22: 2.0219 REMARK 3 L33: 1.7829 L12: -0.2145 REMARK 3 L13: -0.0340 L23: 1.4519 REMARK 3 S TENSOR REMARK 3 S11: -0.0863 S12: -0.0318 S13: 0.0080 REMARK 3 S21: 0.0408 S22: -0.2174 S23: 0.3466 REMARK 3 S31: -0.0592 S32: -0.5736 S33: 0.2508 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 194:219 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3685 16.0970 29.3382 REMARK 3 T TENSOR REMARK 3 T11: 0.1878 T22: 0.2096 REMARK 3 T33: 0.2275 T12: 0.0645 REMARK 3 T13: -0.0263 T23: -0.0549 REMARK 3 L TENSOR REMARK 3 L11: 0.2188 L22: 3.4056 REMARK 3 L33: 2.8300 L12: -0.3565 REMARK 3 L13: 0.3400 L23: 2.1358 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: -0.0832 S13: 0.1216 REMARK 3 S21: -0.1044 S22: 0.0327 S23: -0.0984 REMARK 3 S31: -0.4191 S32: -0.3189 S33: -0.0761 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 220:259 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6167 10.1665 34.5619 REMARK 3 T TENSOR REMARK 3 T11: 0.2174 T22: 0.2261 REMARK 3 T33: 0.1746 T12: 0.1083 REMARK 3 T13: -0.0584 T23: -0.0752 REMARK 3 L TENSOR REMARK 3 L11: 1.1241 L22: 2.0694 REMARK 3 L33: 2.3088 L12: 0.2998 REMARK 3 L13: -0.2421 L23: 1.0747 REMARK 3 S TENSOR REMARK 3 S11: -0.1852 S12: -0.2726 S13: 0.1703 REMARK 3 S21: 0.5047 S22: 0.2763 S23: -0.3395 REMARK 3 S31: 0.2053 S32: 0.1494 S33: -0.0912 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 260:315 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6012 -5.1353 15.8093 REMARK 3 T TENSOR REMARK 3 T11: 0.1139 T22: 0.1212 REMARK 3 T33: 0.1943 T12: -0.0226 REMARK 3 T13: 0.0204 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 1.1597 L22: 3.4615 REMARK 3 L33: 5.3141 L12: -0.7595 REMARK 3 L13: -1.3117 L23: 1.6443 REMARK 3 S TENSOR REMARK 3 S11: -0.1719 S12: 0.0658 S13: -0.1047 REMARK 3 S21: 0.0386 S22: -0.0786 S23: 0.1580 REMARK 3 S31: 0.4497 S32: -0.3011 S33: 0.2198 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YLE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000207650. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28926 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 29.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 10.70 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.6 REMARK 200 DATA REDUNDANCY IN SHELL : 11.00 REMARK 200 R MERGE FOR SHELL (I) : 0.81600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (10 MM HEPES PH 7.5, 5 MM REMARK 280 DTT); RESERVOIR (MCSG1 G7, 0.1 M TRIS PH 8.5, 25% (W/V) PEG 3350) REMARK 280 ; CRYOPROTECTION (20% GLYCEROL, 80% RESERVOIR), VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 16.48300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.53000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.63350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.53000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 16.48300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.63350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 ASN A 2 REMARK 465 VAL A 3 REMARK 465 ARG A 4 REMARK 465 PHE A 5 REMARK 465 ARG A 6 REMARK 465 ARG A 7 REMARK 465 ARG A 8 REMARK 465 PHE A 9 REMARK 465 LEU A 10 REMARK 465 THR A 11 REMARK 465 ALA A 12 REMARK 465 ALA A 13 REMARK 465 LEU A 14 REMARK 465 ALA A 15 REMARK 465 ALA A 16 REMARK 465 VAL A 17 REMARK 465 ALA A 18 REMARK 465 VAL A 19 REMARK 465 ALA A 20 REMARK 465 ALA A 21 REMARK 465 ALA A 22 REMARK 465 PRO A 23 REMARK 465 ALA A 24 REMARK 465 VAL A 25 REMARK 465 HIS A 26 REMARK 465 ALA A 27 REMARK 465 GLN A 28 REMARK 465 ALA A 29 REMARK 465 SER A 304 REMARK 465 GLY A 305 REMARK 465 VAL A 306 REMARK 465 LYS A 316 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 59 CG CD CE NZ REMARK 470 LYS A 111 CG CD CE NZ REMARK 470 GLN A 248 CG CD OE1 NE2 REMARK 470 LYS A 267 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 40 -129.51 -97.63 REMARK 500 ASP A 124 -71.58 74.27 REMARK 500 ASP A 257 -28.93 135.78 REMARK 500 TYR A 278 70.78 56.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-511115 RELATED DB: TARGETTRACK DBREF 4YLE A 1 316 UNP A9AIX1 A9AIX1_BURM1 1 316 SEQRES 1 A 316 MSE ASN VAL ARG PHE ARG ARG ARG PHE LEU THR ALA ALA SEQRES 2 A 316 LEU ALA ALA VAL ALA VAL ALA ALA ALA PRO ALA VAL HIS SEQRES 3 A 316 ALA GLN ALA ALA GLY LYS PRO LYS VAL ALA LEU VAL MSE SEQRES 4 A 316 LYS SER LEU ALA ASN GLU PHE PHE LEU THR MSE GLU ASN SEQRES 5 A 316 GLY ALA LYS GLU TYR GLN LYS HIS ASN ALA SER GLN PHE SEQRES 6 A 316 ASP LEU ILE THR ASN GLY ILE LYS ASP GLU THR ASP THR SEQRES 7 A 316 ALA ASN GLN ILE ARG ILE VAL GLU GLN MSE ILE VAL SER SEQRES 8 A 316 LYS VAL ASP ALA ILE VAL LEU ALA PRO ALA ASP SER LYS SEQRES 9 A 316 ALA LEU VAL PRO VAL VAL LYS LYS ALA VAL ASP ALA GLY SEQRES 10 A 316 ILE ILE VAL VAL ASN ILE ASP ASN ARG LEU ASP PRO ASP SEQRES 11 A 316 VAL LEU LYS SER LYS ASN LEU ASN VAL PRO PHE VAL GLY SEQRES 12 A 316 PRO ASP ASN ARG LYS GLY ALA ARG LYS VAL GLY ASP TYR SEQRES 13 A 316 LEU ALA LYS LYS LEU LYS ALA GLY ASP GLN VAL GLY ILE SEQRES 14 A 316 VAL GLU GLY VAL SER THR THR THR ASN ALA GLN GLN ARG SEQRES 15 A 316 THR ALA GLY PHE GLN ASP ALA MSE LYS ALA GLY GLY MSE SEQRES 16 A 316 LYS VAL VAL SER VAL GLN SER GLY GLU TRP GLU ILE ASP SEQRES 17 A 316 LYS GLY ASN ALA VAL ALA SER ALA MSE LEU ASN GLU TYR SEQRES 18 A 316 PRO ASN LEU LYS ALA LEU LEU CYS GLY ASN ASP ASN MSE SEQRES 19 A 316 ALA ILE GLY ALA VAL SER ALA VAL ARG ALA ALA GLY LYS SEQRES 20 A 316 GLN GLY LYS VAL TYR VAL VAL GLY TYR ASP ASN ILE ASN SEQRES 21 A 316 ALA ILE LYS PRO MSE LEU LYS ASP GLY ARG VAL LEU ALA SEQRES 22 A 316 THR ALA ASP GLN TYR ALA ALA LYS GLN ALA VAL PHE GLY SEQRES 23 A 316 ILE ASP THR ALA LEU LYS ALA ILE ALA GLU HIS ARG LYS SEQRES 24 A 316 GLN ALA GLU LEU SER GLY VAL VAL GLU THR PRO VAL ASP SEQRES 25 A 316 LEU VAL THR LYS MODRES 4YLE MSE A 39 MET MODIFIED RESIDUE MODRES 4YLE MSE A 50 MET MODIFIED RESIDUE MODRES 4YLE MSE A 88 MET MODIFIED RESIDUE MODRES 4YLE MSE A 190 MET MODIFIED RESIDUE MODRES 4YLE MSE A 195 MET MODIFIED RESIDUE MODRES 4YLE MSE A 217 MET MODIFIED RESIDUE MODRES 4YLE MSE A 234 MET MODIFIED RESIDUE MODRES 4YLE MSE A 265 MET MODIFIED RESIDUE HET MSE A 39 17 HET MSE A 50 17 HET MSE A 88 17 HET MSE A 190 17 HET MSE A 195 17 HET MSE A 217 17 HET MSE A 234 17 HET MSE A 265 17 HET UNL A 401 8 HETNAM MSE SELENOMETHIONINE HETNAM UNL UNKNOWN LIGAND FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 HOH *246(H2 O) HELIX 1 AA1 ASN A 44 ASN A 61 1 18 HELIX 2 AA2 ASP A 77 SER A 91 1 15 HELIX 3 AA3 LEU A 106 ALA A 116 1 11 HELIX 4 AA4 ASP A 128 SER A 134 1 7 HELIX 5 AA5 ASP A 145 LEU A 161 1 17 HELIX 6 AA6 THR A 176 GLY A 194 1 19 HELIX 7 AA7 GLU A 206 TYR A 221 1 16 HELIX 8 AA8 ASN A 231 ALA A 245 1 15 HELIX 9 AA9 ILE A 259 ALA A 261 5 3 HELIX 10 AB1 ILE A 262 ASP A 268 1 7 HELIX 11 AB2 TYR A 278 GLU A 296 1 19 HELIX 12 AB3 LYS A 299 LEU A 303 5 5 SHEET 1 AA1 6 ASP A 66 ILE A 72 0 SHEET 2 AA1 6 LYS A 34 SER A 41 1 N MSE A 39 O ASN A 70 SHEET 3 AA1 6 ALA A 95 LEU A 98 1 O VAL A 97 N ALA A 36 SHEET 4 AA1 6 ILE A 119 ILE A 123 1 O ILE A 123 N LEU A 98 SHEET 5 AA1 6 PHE A 141 PRO A 144 1 O VAL A 142 N ASN A 122 SHEET 6 AA1 6 GLU A 308 THR A 309 1 O THR A 309 N GLY A 143 SHEET 1 AA2 4 LYS A 196 SER A 202 0 SHEET 2 AA2 4 GLN A 166 GLU A 171 1 N GLU A 171 O GLN A 201 SHEET 3 AA2 4 ALA A 226 CYS A 229 1 O LEU A 228 N GLY A 168 SHEET 4 AA2 4 TYR A 252 VAL A 254 1 O TYR A 252 N LEU A 227 SHEET 1 AA3 2 THR A 274 ASP A 276 0 SHEET 2 AA3 2 ASP A 312 VAL A 314 -1 O ASP A 312 N ASP A 276 LINK C VAL A 38 N MSE A 39 1555 1555 1.33 LINK C MSE A 39 N LYS A 40 1555 1555 1.32 LINK C THR A 49 N MSE A 50 1555 1555 1.32 LINK C MSE A 50 N GLU A 51 1555 1555 1.33 LINK C GLN A 87 N MSE A 88 1555 1555 1.33 LINK C MSE A 88 N ILE A 89 1555 1555 1.33 LINK C ALA A 189 N MSE A 190 1555 1555 1.33 LINK C MSE A 190 N LYS A 191 1555 1555 1.34 LINK C GLY A 194 N MSE A 195 1555 1555 1.34 LINK C MSE A 195 N LYS A 196 1555 1555 1.32 LINK C ALA A 216 N MSE A 217 1555 1555 1.34 LINK C MSE A 217 N LEU A 218 1555 1555 1.33 LINK C ASN A 233 N MSE A 234 1555 1555 1.33 LINK C MSE A 234 N ALA A 235 1555 1555 1.34 LINK C PRO A 264 N MSE A 265 1555 1555 1.33 LINK C MSE A 265 N LEU A 266 1555 1555 1.33 CRYST1 32.966 69.267 115.060 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030334 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014437 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008691 0.00000