data_4YMN # _entry.id 4YMN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4YMN pdb_00004ymn 10.2210/pdb4ymn/pdb WWPDB D_1000207711 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-03-09 2 'Structure model' 1 1 2018-07-25 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' pdbx_struct_oper_list 4 3 'Structure model' chem_comp_atom 5 3 'Structure model' chem_comp_bond 6 3 'Structure model' database_2 7 3 'Structure model' pdbx_struct_conn_angle 8 3 'Structure model' struct_conn 9 3 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 11 3 'Structure model' '_database_2.pdbx_DOI' 12 3 'Structure model' '_database_2.pdbx_database_accession' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 24 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 25 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 26 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 27 3 'Structure model' '_pdbx_struct_conn_angle.value' 28 3 'Structure model' '_struct_conn.conn_type_id' 29 3 'Structure model' '_struct_conn.id' 30 3 'Structure model' '_struct_conn.pdbx_dist_value' 31 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 32 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 33 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 34 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 35 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 36 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 37 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 38 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 39 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 40 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 41 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 42 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 43 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 44 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 45 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 46 3 'Structure model' '_struct_conn_type.id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4YMN _pdbx_database_status.recvd_initial_deposition_date 2015-03-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 4YMM PDB . unspecified 4YMO PDB . unspecified 4YN4 PDB . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lee, S.' 1 'Koag, M.-C.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochemistry _citation.journal_id_ASTM BICHAW _citation.journal_id_CSD 0033 _citation.journal_id_ISSN 1520-4995 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural and kinetic studies of the effect of guanine-N7 alkylation and metal cofactors on DNA replication.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.biochem.8b00331 _citation.pdbx_database_id_PubMed 29957995 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kou, Y.' 1 ? primary 'Koag, M.C.' 2 ? primary 'Lee, S.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase beta' 38241.672 1 2.7.7.7,4.2.99.- ? ? ? 2 polymer syn 'DNA 16-mer (template)' 4953.265 1 ? ? ? ? 3 polymer syn 'DNA 10-mer (up-primer)' 3085.029 1 ? ? ? ? 4 polymer syn 'DNA 5-mer (dn-primer)' 1536.035 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 7 non-polymer syn "2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine" 466.172 1 ? ? ? ? 8 water nat water 18.015 84 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; A ? 2 polydeoxyribonucleotide no yes '(DC)(DC)(DG)(DA)(DC)(7BG)(DT)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACXTCGCATCAGC T ? 3 polydeoxyribonucleotide no no '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DA)' GCTGATGCGA P ? 4 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'MAGNESIUM ION' MG 6 'SODIUM ION' NA 7 "2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine" 0KX 8 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 LYS n 1 4 ARG n 1 5 LYS n 1 6 ALA n 1 7 PRO n 1 8 GLN n 1 9 GLU n 1 10 THR n 1 11 LEU n 1 12 ASN n 1 13 GLY n 1 14 GLY n 1 15 ILE n 1 16 THR n 1 17 ASP n 1 18 MET n 1 19 LEU n 1 20 THR n 1 21 GLU n 1 22 LEU n 1 23 ALA n 1 24 ASN n 1 25 PHE n 1 26 GLU n 1 27 LYS n 1 28 ASN n 1 29 VAL n 1 30 SER n 1 31 GLN n 1 32 ALA n 1 33 ILE n 1 34 HIS n 1 35 LYS n 1 36 TYR n 1 37 ASN n 1 38 ALA n 1 39 TYR n 1 40 ARG n 1 41 LYS n 1 42 ALA n 1 43 ALA n 1 44 SER n 1 45 VAL n 1 46 ILE n 1 47 ALA n 1 48 LYS n 1 49 TYR n 1 50 PRO n 1 51 HIS n 1 52 LYS n 1 53 ILE n 1 54 LYS n 1 55 SER n 1 56 GLY n 1 57 ALA n 1 58 GLU n 1 59 ALA n 1 60 LYS n 1 61 LYS n 1 62 LEU n 1 63 PRO n 1 64 GLY n 1 65 VAL n 1 66 GLY n 1 67 THR n 1 68 LYS n 1 69 ILE n 1 70 ALA n 1 71 GLU n 1 72 LYS n 1 73 ILE n 1 74 ASP n 1 75 GLU n 1 76 PHE n 1 77 LEU n 1 78 ALA n 1 79 THR n 1 80 GLY n 1 81 LYS n 1 82 LEU n 1 83 ARG n 1 84 LYS n 1 85 LEU n 1 86 GLU n 1 87 LYS n 1 88 ILE n 1 89 ARG n 1 90 GLN n 1 91 ASP n 1 92 ASP n 1 93 THR n 1 94 SER n 1 95 SER n 1 96 SER n 1 97 ILE n 1 98 ASN n 1 99 PHE n 1 100 LEU n 1 101 THR n 1 102 ARG n 1 103 VAL n 1 104 SER n 1 105 GLY n 1 106 ILE n 1 107 GLY n 1 108 PRO n 1 109 SER n 1 110 ALA n 1 111 ALA n 1 112 ARG n 1 113 LYS n 1 114 PHE n 1 115 VAL n 1 116 ASP n 1 117 GLU n 1 118 GLY n 1 119 ILE n 1 120 LYS n 1 121 THR n 1 122 LEU n 1 123 GLU n 1 124 ASP n 1 125 LEU n 1 126 ARG n 1 127 LYS n 1 128 ASN n 1 129 GLU n 1 130 ASP n 1 131 LYS n 1 132 LEU n 1 133 ASN n 1 134 HIS n 1 135 HIS n 1 136 GLN n 1 137 ARG n 1 138 ILE n 1 139 GLY n 1 140 LEU n 1 141 LYS n 1 142 TYR n 1 143 PHE n 1 144 GLY n 1 145 ASP n 1 146 PHE n 1 147 GLU n 1 148 LYS n 1 149 ARG n 1 150 ILE n 1 151 PRO n 1 152 ARG n 1 153 GLU n 1 154 GLU n 1 155 MET n 1 156 LEU n 1 157 GLN n 1 158 MET n 1 159 GLN n 1 160 ASP n 1 161 ILE n 1 162 VAL n 1 163 LEU n 1 164 ASN n 1 165 GLU n 1 166 VAL n 1 167 LYS n 1 168 LYS n 1 169 VAL n 1 170 ASP n 1 171 SER n 1 172 GLU n 1 173 TYR n 1 174 ILE n 1 175 ALA n 1 176 THR n 1 177 VAL n 1 178 CYS n 1 179 GLY n 1 180 SER n 1 181 PHE n 1 182 ARG n 1 183 ARG n 1 184 GLY n 1 185 ALA n 1 186 GLU n 1 187 SER n 1 188 SER n 1 189 GLY n 1 190 ASP n 1 191 MET n 1 192 ASP n 1 193 VAL n 1 194 LEU n 1 195 LEU n 1 196 THR n 1 197 HIS n 1 198 PRO n 1 199 SER n 1 200 PHE n 1 201 THR n 1 202 SER n 1 203 GLU n 1 204 SER n 1 205 THR n 1 206 LYS n 1 207 GLN n 1 208 PRO n 1 209 LYS n 1 210 LEU n 1 211 LEU n 1 212 HIS n 1 213 GLN n 1 214 VAL n 1 215 VAL n 1 216 GLU n 1 217 GLN n 1 218 LEU n 1 219 GLN n 1 220 LYS n 1 221 VAL n 1 222 HIS n 1 223 PHE n 1 224 ILE n 1 225 THR n 1 226 ASP n 1 227 THR n 1 228 LEU n 1 229 SER n 1 230 LYS n 1 231 GLY n 1 232 GLU n 1 233 THR n 1 234 LYS n 1 235 PHE n 1 236 MET n 1 237 GLY n 1 238 VAL n 1 239 CYS n 1 240 GLN n 1 241 LEU n 1 242 PRO n 1 243 SER n 1 244 LYS n 1 245 ASN n 1 246 ASP n 1 247 GLU n 1 248 LYS n 1 249 GLU n 1 250 TYR n 1 251 PRO n 1 252 HIS n 1 253 ARG n 1 254 ARG n 1 255 ILE n 1 256 ASP n 1 257 ILE n 1 258 ARG n 1 259 LEU n 1 260 ILE n 1 261 PRO n 1 262 LYS n 1 263 ASP n 1 264 GLN n 1 265 TYR n 1 266 TYR n 1 267 CYS n 1 268 GLY n 1 269 VAL n 1 270 LEU n 1 271 TYR n 1 272 PHE n 1 273 THR n 1 274 GLY n 1 275 SER n 1 276 ASP n 1 277 ILE n 1 278 PHE n 1 279 ASN n 1 280 LYS n 1 281 ASN n 1 282 MET n 1 283 ARG n 1 284 ALA n 1 285 HIS n 1 286 ALA n 1 287 LEU n 1 288 GLU n 1 289 LYS n 1 290 GLY n 1 291 PHE n 1 292 THR n 1 293 ILE n 1 294 ASN n 1 295 GLU n 1 296 TYR n 1 297 THR n 1 298 ILE n 1 299 ARG n 1 300 PRO n 1 301 LEU n 1 302 GLY n 1 303 VAL n 1 304 THR n 1 305 GLY n 1 306 VAL n 1 307 ALA n 1 308 GLY n 1 309 GLU n 1 310 PRO n 1 311 LEU n 1 312 PRO n 1 313 VAL n 1 314 ASP n 1 315 SER n 1 316 GLU n 1 317 LYS n 1 318 ASP n 1 319 ILE n 1 320 PHE n 1 321 ASP n 1 322 TYR n 1 323 ILE n 1 324 GLN n 1 325 TRP n 1 326 LYS n 1 327 TYR n 1 328 ARG n 1 329 GLU n 1 330 PRO n 1 331 LYS n 1 332 ASP n 1 333 ARG n 1 334 SER n 1 335 GLU n 2 1 DC n 2 2 DC n 2 3 DG n 2 4 DA n 2 5 DC n 2 6 7BG n 2 7 DT n 2 8 DC n 2 9 DG n 2 10 DC n 2 11 DA n 2 12 DT n 2 13 DC n 2 14 DA n 2 15 DG n 2 16 DC n 3 1 DG n 3 2 DC n 3 3 DT n 3 4 DG n 3 5 DA n 3 6 DT n 3 7 DG n 3 8 DC n 3 9 DG n 3 10 DA n 4 1 DG n 4 2 DT n 4 3 DC n 4 4 DG n 4 5 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 335 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene POLB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 16 'Homo sapiens' Human 9606 ? 3 1 sample 1 10 'Homo sapiens' Human 9606 ? 4 1 sample 1 5 'Homo sapiens' Human 9606 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0KX non-polymer . "2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine" ? 'C9 H17 N4 O12 P3' 466.172 7BG 'DNA linking' n '2-amino-7-benzyl-9-(2-deoxy-2-fluoro-5-O-phosphono-beta-D-arabinofuranosyl)-6-oxo-6,9-dihydro-1H-purin-7-ium' ? 'C17 H20 F N5 O7 P 1' 456.342 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 ARG 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 ALA 6 6 ? ? ? A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 MET 18 18 18 MET MET A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 HIS 34 34 34 HIS HIS A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 HIS 51 51 51 HIS HIS A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 ASN 133 133 133 ASN ASN A . n A 1 134 HIS 134 134 134 HIS HIS A . n A 1 135 HIS 135 135 135 HIS HIS A . n A 1 136 GLN 136 136 136 GLN GLN A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 TYR 142 142 142 TYR TYR A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 GLY 144 144 144 GLY GLY A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 PRO 151 151 151 PRO PRO A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 MET 155 155 155 MET MET A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 GLN 157 157 157 GLN GLN A . n A 1 158 MET 158 158 158 MET MET A . n A 1 159 GLN 159 159 159 GLN GLN A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 LYS 167 167 167 LYS LYS A . n A 1 168 LYS 168 168 168 LYS LYS A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 ASP 170 170 170 ASP ASP A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 TYR 173 173 173 TYR TYR A . n A 1 174 ILE 174 174 174 ILE ILE A . n A 1 175 ALA 175 175 175 ALA ALA A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 CYS 178 178 178 CYS CYS A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 PHE 181 181 181 PHE PHE A . n A 1 182 ARG 182 182 182 ARG ARG A . n A 1 183 ARG 183 183 183 ARG ARG A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 SER 187 187 187 SER SER A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 MET 191 191 191 MET MET A . n A 1 192 ASP 192 192 192 ASP ASP A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 HIS 197 197 197 HIS HIS A . n A 1 198 PRO 198 198 198 PRO PRO A . n A 1 199 SER 199 199 199 SER SER A . n A 1 200 PHE 200 200 200 PHE PHE A . n A 1 201 THR 201 201 201 THR THR A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 GLU 203 203 203 GLU GLU A . n A 1 204 SER 204 204 204 SER SER A . n A 1 205 THR 205 205 ? ? ? A . n A 1 206 LYS 206 206 ? ? ? A . n A 1 207 GLN 207 207 207 GLN GLN A . n A 1 208 PRO 208 208 208 PRO PRO A . n A 1 209 LYS 209 209 209 LYS LYS A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 HIS 212 212 212 HIS HIS A . n A 1 213 GLN 213 213 213 GLN GLN A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 VAL 215 215 215 VAL VAL A . n A 1 216 GLU 216 216 216 GLU GLU A . n A 1 217 GLN 217 217 217 GLN GLN A . n A 1 218 LEU 218 218 218 LEU LEU A . n A 1 219 GLN 219 219 219 GLN GLN A . n A 1 220 LYS 220 220 220 LYS LYS A . n A 1 221 VAL 221 221 221 VAL VAL A . n A 1 222 HIS 222 222 222 HIS HIS A . n A 1 223 PHE 223 223 223 PHE PHE A . n A 1 224 ILE 224 224 224 ILE ILE A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 ASP 226 226 226 ASP ASP A . n A 1 227 THR 227 227 227 THR THR A . n A 1 228 LEU 228 228 228 LEU LEU A . n A 1 229 SER 229 229 229 SER SER A . n A 1 230 LYS 230 230 230 LYS LYS A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 THR 233 233 233 THR THR A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 PHE 235 235 235 PHE PHE A . n A 1 236 MET 236 236 236 MET MET A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 VAL 238 238 238 VAL VAL A . n A 1 239 CYS 239 239 239 CYS CYS A . n A 1 240 GLN 240 240 240 GLN GLN A . n A 1 241 LEU 241 241 241 LEU LEU A . n A 1 242 PRO 242 242 242 PRO PRO A . n A 1 243 SER 243 243 243 SER SER A . n A 1 244 LYS 244 244 244 LYS LYS A . n A 1 245 ASN 245 245 245 ASN ASN A . n A 1 246 ASP 246 246 246 ASP ASP A . n A 1 247 GLU 247 247 247 GLU GLU A . n A 1 248 LYS 248 248 248 LYS LYS A . n A 1 249 GLU 249 249 249 GLU GLU A . n A 1 250 TYR 250 250 250 TYR TYR A . n A 1 251 PRO 251 251 251 PRO PRO A . n A 1 252 HIS 252 252 252 HIS HIS A . n A 1 253 ARG 253 253 253 ARG ARG A . n A 1 254 ARG 254 254 254 ARG ARG A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 ASP 256 256 256 ASP ASP A . n A 1 257 ILE 257 257 257 ILE ILE A . n A 1 258 ARG 258 258 258 ARG ARG A . n A 1 259 LEU 259 259 259 LEU LEU A . n A 1 260 ILE 260 260 260 ILE ILE A . n A 1 261 PRO 261 261 261 PRO PRO A . n A 1 262 LYS 262 262 262 LYS LYS A . n A 1 263 ASP 263 263 263 ASP ASP A . n A 1 264 GLN 264 264 264 GLN GLN A . n A 1 265 TYR 265 265 265 TYR TYR A . n A 1 266 TYR 266 266 266 TYR TYR A . n A 1 267 CYS 267 267 267 CYS CYS A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 VAL 269 269 269 VAL VAL A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 TYR 271 271 271 TYR TYR A . n A 1 272 PHE 272 272 272 PHE PHE A . n A 1 273 THR 273 273 273 THR THR A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 SER 275 275 275 SER SER A . n A 1 276 ASP 276 276 276 ASP ASP A . n A 1 277 ILE 277 277 277 ILE ILE A . n A 1 278 PHE 278 278 278 PHE PHE A . n A 1 279 ASN 279 279 279 ASN ASN A . n A 1 280 LYS 280 280 280 LYS LYS A . n A 1 281 ASN 281 281 281 ASN ASN A . n A 1 282 MET 282 282 282 MET MET A . n A 1 283 ARG 283 283 283 ARG ARG A . n A 1 284 ALA 284 284 284 ALA ALA A . n A 1 285 HIS 285 285 285 HIS HIS A . n A 1 286 ALA 286 286 286 ALA ALA A . n A 1 287 LEU 287 287 287 LEU LEU A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 LYS 289 289 289 LYS LYS A . n A 1 290 GLY 290 290 290 GLY GLY A . n A 1 291 PHE 291 291 291 PHE PHE A . n A 1 292 THR 292 292 292 THR THR A . n A 1 293 ILE 293 293 293 ILE ILE A . n A 1 294 ASN 294 294 294 ASN ASN A . n A 1 295 GLU 295 295 295 GLU GLU A . n A 1 296 TYR 296 296 296 TYR TYR A . n A 1 297 THR 297 297 297 THR THR A . n A 1 298 ILE 298 298 298 ILE ILE A . n A 1 299 ARG 299 299 299 ARG ARG A . n A 1 300 PRO 300 300 300 PRO PRO A . n A 1 301 LEU 301 301 301 LEU LEU A . n A 1 302 GLY 302 302 302 GLY GLY A . n A 1 303 VAL 303 303 303 VAL VAL A . n A 1 304 THR 304 304 304 THR THR A . n A 1 305 GLY 305 305 305 GLY GLY A . n A 1 306 VAL 306 306 306 VAL VAL A . n A 1 307 ALA 307 307 307 ALA ALA A . n A 1 308 GLY 308 308 308 GLY GLY A . n A 1 309 GLU 309 309 309 GLU GLU A . n A 1 310 PRO 310 310 310 PRO PRO A . n A 1 311 LEU 311 311 311 LEU LEU A . n A 1 312 PRO 312 312 312 PRO PRO A . n A 1 313 VAL 313 313 313 VAL VAL A . n A 1 314 ASP 314 314 314 ASP ASP A . n A 1 315 SER 315 315 315 SER SER A . n A 1 316 GLU 316 316 316 GLU GLU A . n A 1 317 LYS 317 317 317 LYS LYS A . n A 1 318 ASP 318 318 318 ASP ASP A . n A 1 319 ILE 319 319 319 ILE ILE A . n A 1 320 PHE 320 320 320 PHE PHE A . n A 1 321 ASP 321 321 321 ASP ASP A . n A 1 322 TYR 322 322 322 TYR TYR A . n A 1 323 ILE 323 323 323 ILE ILE A . n A 1 324 GLN 324 324 324 GLN GLN A . n A 1 325 TRP 325 325 325 TRP TRP A . n A 1 326 LYS 326 326 326 LYS LYS A . n A 1 327 TYR 327 327 327 TYR TYR A . n A 1 328 ARG 328 328 328 ARG ARG A . n A 1 329 GLU 329 329 329 GLU GLU A . n A 1 330 PRO 330 330 330 PRO PRO A . n A 1 331 LYS 331 331 331 LYS LYS A . n A 1 332 ASP 332 332 332 ASP ASP A . n A 1 333 ARG 333 333 333 ARG ARG A . n A 1 334 SER 334 334 334 SER SER A . n A 1 335 GLU 335 335 335 GLU GLU A . n B 2 1 DC 1 1 1 DC DC T . n B 2 2 DC 2 2 2 DC DC T . n B 2 3 DG 3 3 3 DG DG T . n B 2 4 DA 4 4 4 DA DA T . n B 2 5 DC 5 5 5 DC DC T . n B 2 6 7BG 6 6 6 7BG 7BG T . n B 2 7 DT 7 7 7 DT DT T . n B 2 8 DC 8 8 8 DC DC T . n B 2 9 DG 9 9 9 DG DG T . n B 2 10 DC 10 10 10 DC DC T . n B 2 11 DA 11 11 11 DA DA T . n B 2 12 DT 12 12 12 DT DT T . n B 2 13 DC 13 13 13 DC DC T . n B 2 14 DA 14 14 14 DA DA T . n B 2 15 DG 15 15 15 DG DG T . n B 2 16 DC 16 16 16 DC DC T . n C 3 1 DG 1 1 1 DG DG P . n C 3 2 DC 2 2 2 DC DC P . n C 3 3 DT 3 3 3 DT DT P . n C 3 4 DG 4 4 4 DG DG P . n C 3 5 DA 5 5 5 DA DA P . n C 3 6 DT 6 6 6 DT DT P . n C 3 7 DG 7 7 7 DG DG P . n C 3 8 DC 8 8 8 DC DC P . n C 3 9 DG 9 9 9 DG DG P . n C 3 10 DA 10 10 10 DA DA P . n D 4 1 DG 1 1 1 DG DG D . n D 4 2 DT 2 2 2 DT DT D . n D 4 3 DC 3 3 3 DC DC D . n D 4 4 DG 4 4 4 DG DG D . n D 4 5 DG 5 5 5 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MG 1 401 400 MG MG A . F 6 NA 1 402 402 NA NA A . G 6 NA 1 403 403 NA NA A . H 7 0KX 1 404 405 0KX 0KX A . I 8 HOH 1 501 60 HOH HOH A . I 8 HOH 2 502 65 HOH HOH A . I 8 HOH 3 503 18 HOH HOH A . I 8 HOH 4 504 43 HOH HOH A . I 8 HOH 5 505 54 HOH HOH A . I 8 HOH 6 506 62 HOH HOH A . I 8 HOH 7 507 30 HOH HOH A . I 8 HOH 8 508 16 HOH HOH A . I 8 HOH 9 509 63 HOH HOH A . I 8 HOH 10 510 76 HOH HOH A . I 8 HOH 11 511 77 HOH HOH A . I 8 HOH 12 512 50 HOH HOH A . I 8 HOH 13 513 80 HOH HOH A . I 8 HOH 14 514 59 HOH HOH A . I 8 HOH 15 515 27 HOH HOH A . I 8 HOH 16 516 2 HOH HOH A . I 8 HOH 17 517 4 HOH HOH A . I 8 HOH 18 518 5 HOH HOH A . I 8 HOH 19 519 6 HOH HOH A . I 8 HOH 20 520 7 HOH HOH A . I 8 HOH 21 521 8 HOH HOH A . I 8 HOH 22 522 9 HOH HOH A . I 8 HOH 23 523 11 HOH HOH A . I 8 HOH 24 524 12 HOH HOH A . I 8 HOH 25 525 13 HOH HOH A . I 8 HOH 26 526 17 HOH HOH A . I 8 HOH 27 527 19 HOH HOH A . I 8 HOH 28 528 22 HOH HOH A . I 8 HOH 29 529 23 HOH HOH A . I 8 HOH 30 530 24 HOH HOH A . I 8 HOH 31 531 32 HOH HOH A . I 8 HOH 32 532 33 HOH HOH A . I 8 HOH 33 533 35 HOH HOH A . I 8 HOH 34 534 37 HOH HOH A . I 8 HOH 35 535 38 HOH HOH A . I 8 HOH 36 536 39 HOH HOH A . I 8 HOH 37 537 41 HOH HOH A . I 8 HOH 38 538 42 HOH HOH A . I 8 HOH 39 539 48 HOH HOH A . I 8 HOH 40 540 55 HOH HOH A . I 8 HOH 41 541 61 HOH HOH A . I 8 HOH 42 542 64 HOH HOH A . I 8 HOH 43 543 66 HOH HOH A . I 8 HOH 44 544 67 HOH HOH A . I 8 HOH 45 545 70 HOH HOH A . I 8 HOH 46 546 75 HOH HOH A . I 8 HOH 47 547 78 HOH HOH A . I 8 HOH 48 548 79 HOH HOH A . I 8 HOH 49 549 82 HOH HOH A . I 8 HOH 50 550 85 HOH HOH A . I 8 HOH 51 551 86 HOH HOH A . I 8 HOH 52 552 87 HOH HOH A . I 8 HOH 53 553 91 HOH HOH A . I 8 HOH 54 554 92 HOH HOH A . I 8 HOH 55 555 93 HOH HOH A . I 8 HOH 56 556 94 HOH HOH A . J 8 HOH 1 101 46 HOH HOH T . J 8 HOH 2 102 73 HOH HOH T . J 8 HOH 3 103 88 HOH HOH T . J 8 HOH 4 104 40 HOH HOH T . J 8 HOH 5 105 10 HOH HOH T . J 8 HOH 6 106 14 HOH HOH T . J 8 HOH 7 107 15 HOH HOH T . J 8 HOH 8 108 29 HOH HOH T . J 8 HOH 9 109 45 HOH HOH T . J 8 HOH 10 110 53 HOH HOH T . K 8 HOH 1 101 71 HOH HOH P . K 8 HOH 2 102 25 HOH HOH P . K 8 HOH 3 103 3 HOH HOH P . K 8 HOH 4 104 20 HOH HOH P . K 8 HOH 5 105 28 HOH HOH P . K 8 HOH 6 106 47 HOH HOH P . K 8 HOH 7 107 49 HOH HOH P . K 8 HOH 8 108 52 HOH HOH P . K 8 HOH 9 109 69 HOH HOH P . K 8 HOH 10 110 81 HOH HOH P . K 8 HOH 11 111 84 HOH HOH P . K 8 HOH 12 112 90 HOH HOH P . L 8 HOH 1 101 57 HOH HOH D . L 8 HOH 2 102 56 HOH HOH D . L 8 HOH 3 103 31 HOH HOH D . L 8 HOH 4 104 34 HOH HOH D . L 8 HOH 5 105 68 HOH HOH D . L 8 HOH 6 106 72 HOH HOH D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 8 ? CG ? A GLN 8 CG 2 1 Y 1 A GLN 8 ? CD ? A GLN 8 CD 3 1 Y 1 A GLN 8 ? OE1 ? A GLN 8 OE1 4 1 Y 1 A GLN 8 ? NE2 ? A GLN 8 NE2 5 1 Y 1 A GLU 9 ? CG ? A GLU 9 CG 6 1 Y 1 A GLU 9 ? CD ? A GLU 9 CD 7 1 Y 1 A GLU 9 ? OE1 ? A GLU 9 OE1 8 1 Y 1 A GLU 9 ? OE2 ? A GLU 9 OE2 9 1 Y 1 A GLU 203 ? CG ? A GLU 203 CG 10 1 Y 1 A GLU 203 ? CD ? A GLU 203 CD 11 1 Y 1 A GLU 203 ? OE1 ? A GLU 203 OE1 12 1 Y 1 A GLU 203 ? OE2 ? A GLU 203 OE2 13 1 Y 1 A GLN 207 ? CG ? A GLN 207 CG 14 1 Y 1 A GLN 207 ? CD ? A GLN 207 CD 15 1 Y 1 A GLN 207 ? OE1 ? A GLN 207 OE1 16 1 Y 1 A GLN 207 ? NE2 ? A GLN 207 NE2 17 1 Y 1 A LYS 244 ? CG ? A LYS 244 CG 18 1 Y 1 A LYS 244 ? CD ? A LYS 244 CD 19 1 Y 1 A LYS 244 ? CE ? A LYS 244 CE 20 1 Y 1 A LYS 244 ? NZ ? A LYS 244 NZ 21 1 Y 1 A ASN 245 ? CG ? A ASN 245 CG 22 1 Y 1 A ASN 245 ? OD1 ? A ASN 245 OD1 23 1 Y 1 A ASN 245 ? ND2 ? A ASN 245 ND2 24 1 Y 1 A ASP 246 ? CG ? A ASP 246 CG 25 1 Y 1 A ASP 246 ? OD1 ? A ASP 246 OD1 26 1 Y 1 A ASP 246 ? OD2 ? A ASP 246 OD2 27 1 Y 1 A GLU 247 ? CG ? A GLU 247 CG 28 1 Y 1 A GLU 247 ? CD ? A GLU 247 CD 29 1 Y 1 A GLU 247 ? OE1 ? A GLU 247 OE1 30 1 Y 1 A GLU 247 ? OE2 ? A GLU 247 OE2 31 1 Y 1 A LEU 287 ? CG ? A LEU 287 CG 32 1 Y 1 A LEU 287 ? CD1 ? A LEU 287 CD1 33 1 Y 1 A LEU 287 ? CD2 ? A LEU 287 CD2 34 1 Y 1 A GLN 324 ? CG ? A GLN 324 CG 35 1 Y 1 A GLN 324 ? CD ? A GLN 324 CD 36 1 Y 1 A GLN 324 ? OE1 ? A GLN 324 OE1 37 1 Y 1 A GLN 324 ? NE2 ? A GLN 324 NE2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(phenix.refine: 1.8.4_1496)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DENZO ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _cell.entry_id 4YMN _cell.length_a 54.907 _cell.length_b 79.020 _cell.length_c 55.019 _cell.angle_alpha 90.00 _cell.angle_beta 107.92 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YMN _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4YMN _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.37 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.20 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 297 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '14% to 23% PEG3400, and 350 mM sodium acetate in 50 mM imidazole (pH 7.5)' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-08-29 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97648 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.3' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97648 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.3 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4YMN _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.591 _reflns.d_resolution_low 20.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13902 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4YMN _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 13320 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.755 _refine.ls_d_res_high 2.591 _refine.ls_percent_reflns_obs 95.37 _refine.ls_R_factor_obs 0.2031 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1998 _refine.ls_R_factor_R_free 0.2692 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.91 _refine.ls_number_reflns_R_free 654 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method NONE _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.38 _refine.pdbx_overall_phase_error 27.26 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2586 _refine_hist.pdbx_number_atoms_nucleic_acid 640 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 84 _refine_hist.number_atoms_total 3341 _refine_hist.d_res_high 2.591 _refine_hist.d_res_low 19.755 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.009 ? ? 3387 'X-RAY DIFFRACTION' ? f_angle_d 1.618 ? ? 4699 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 21.370 ? ? 1328 'X-RAY DIFFRACTION' ? f_chiral_restr 0.094 ? ? 518 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 492 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.5912 2.7908 2304 0.2727 87.00 0.3623 . . 111 . . . . 'X-RAY DIFFRACTION' . 2.7908 3.0707 2472 0.2459 94.00 0.3308 . . 139 . . . . 'X-RAY DIFFRACTION' . 3.0707 3.5128 2582 0.2233 98.00 0.3179 . . 125 . . . . 'X-RAY DIFFRACTION' . 3.5128 4.4176 2650 0.1781 99.00 0.2388 . . 125 . . . . 'X-RAY DIFFRACTION' . 4.4176 19.7556 2658 0.1632 99.00 0.2141 . . 154 . . . . # _struct.entry_id 4YMN _struct.title 'Structure of human DNA polymerase beta complexed with N7BG in the template base paired with incoming non-hydrolyzable CTP' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4YMN _struct_keywords.text 'human DNA polymerase beta, TRANSFERASE-DNA complex' _struct_keywords.pdbx_keywords TRANSFERASE/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 7 ? I N N 8 ? J N N 8 ? K N N 8 ? L N N 8 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP DPOLB_HUMAN P06746 ? 1 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 2 PDB 4YMN 4YMN ? 2 ? 1 3 PDB 4YMN 4YMN ? 3 ? 1 4 PDB 4YMN 4YMN ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4YMN A 1 ? 335 ? P06746 1 ? 335 ? 1 335 2 2 4YMN T 1 ? 16 ? 4YMN 1 ? 16 ? 1 16 3 3 4YMN P 1 ? 10 ? 4YMN 1 ? 10 ? 1 10 4 4 4YMN D 1 ? 5 ? 4YMN 1 ? 5 ? 1 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4590 ? 1 MORE -53 ? 1 'SSA (A^2)' 21030 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN A 8 ? VAL A 29 ? GLN A 8 VAL A 29 1 ? 22 HELX_P HELX_P2 AA2 ALA A 32 ? LYS A 48 ? ALA A 32 LYS A 48 1 ? 17 HELX_P HELX_P3 AA3 SER A 55 ? LYS A 61 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 AA4 GLY A 66 ? GLY A 80 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 AA5 LEU A 82 ? ASP A 91 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 AA6 ASP A 91 ? THR A 101 ? ASP A 91 THR A 101 1 ? 11 HELX_P HELX_P7 AA7 GLY A 107 ? GLU A 117 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 AA8 THR A 121 ? LYS A 127 ? THR A 121 LYS A 127 1 ? 7 HELX_P HELX_P9 AA9 ASN A 128 ? LEU A 132 ? ASN A 128 LEU A 132 5 ? 5 HELX_P HELX_P10 AB1 ASN A 133 ? TYR A 142 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 AB2 TYR A 142 ? LYS A 148 ? TYR A 142 LYS A 148 1 ? 7 HELX_P HELX_P12 AB3 ARG A 152 ? ASP A 170 ? ARG A 152 ASP A 170 1 ? 19 HELX_P HELX_P13 AB4 CYS A 178 ? ARG A 183 ? CYS A 178 ARG A 183 1 ? 6 HELX_P HELX_P14 AB5 PRO A 208 ? VAL A 221 ? PRO A 208 VAL A 221 1 ? 14 HELX_P HELX_P15 AB6 PRO A 261 ? ASP A 263 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 AB7 GLN A 264 ? GLY A 274 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 AB8 SER A 275 ? HIS A 285 ? SER A 275 HIS A 285 1 ? 11 HELX_P HELX_P18 AB9 ALA A 286 ? GLY A 290 ? ALA A 286 GLY A 290 5 ? 5 HELX_P HELX_P19 AC1 SER A 315 ? ASP A 321 ? SER A 315 ASP A 321 1 ? 7 HELX_P HELX_P20 AC2 GLU A 329 ? ARG A 333 ? GLU A 329 ARG A 333 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 5 "O3'" ? ? ? 1_555 B 7BG 6 P ? ? T DC 5 T 7BG 6 1_555 ? ? ? ? ? ? ? 1.537 ? ? covale2 covale one ? B 7BG 6 "O3'" ? ? ? 1_555 B DT 7 P ? ? T 7BG 6 T DT 7 1_555 ? ? ? ? ? ? ? 1.573 ? ? metalc1 metalc ? ? A LYS 60 O ? ? ? 1_555 G NA . NA ? ? A LYS 60 A NA 403 1_555 ? ? ? ? ? ? ? 2.433 ? ? metalc2 metalc ? ? A LEU 62 O ? ? ? 1_555 G NA . NA ? ? A LEU 62 A NA 403 1_555 ? ? ? ? ? ? ? 2.577 ? ? metalc3 metalc ? ? A VAL 65 O ? ? ? 1_555 G NA . NA ? ? A VAL 65 A NA 403 1_555 ? ? ? ? ? ? ? 2.919 ? ? metalc4 metalc ? ? A THR 101 O ? ? ? 1_555 F NA . NA ? ? A THR 101 A NA 402 1_555 ? ? ? ? ? ? ? 2.261 ? ? metalc5 metalc ? ? A VAL 103 O ? ? ? 1_555 F NA . NA ? ? A VAL 103 A NA 402 1_555 ? ? ? ? ? ? ? 2.869 ? ? metalc6 metalc ? ? A ILE 106 O ? ? ? 1_555 F NA . NA ? ? A ILE 106 A NA 402 1_555 ? ? ? ? ? ? ? 2.641 ? ? metalc7 metalc ? ? A ASP 190 O ? ? ? 1_555 E MG . MG ? ? A ASP 190 A MG 401 1_555 ? ? ? ? ? ? ? 2.994 ? ? metalc8 metalc ? ? A ASP 190 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 190 A MG 401 1_555 ? ? ? ? ? ? ? 2.256 ? ? metalc9 metalc ? ? E MG . MG ? ? ? 1_555 H 0KX . O1B ? ? A MG 401 A 0KX 404 1_555 ? ? ? ? ? ? ? 2.256 ? ? metalc10 metalc ? ? F NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 402 A HOH 554 1_555 ? ? ? ? ? ? ? 3.003 ? ? metalc11 metalc ? ? F NA . NA ? ? ? 1_555 C DG 9 OP1 ? ? A NA 402 P DG 9 1_555 ? ? ? ? ? ? ? 2.271 ? ? metalc12 metalc ? ? G NA . NA ? ? ? 1_555 D DC 3 OP1 ? ? A NA 403 D DC 3 1_555 ? ? ? ? ? ? ? 2.878 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 D DG 5 N1 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 D DG 5 O6 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 D DG 5 N2 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 D DG 4 N1 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 D DG 4 O6 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 D DG 4 N2 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N1 ? ? ? 1_555 D DC 3 N3 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 N2 ? ? ? 1_555 D DC 3 O2 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 3 O6 ? ? ? 1_555 D DC 3 N4 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DA 4 N1 ? ? ? 1_555 D DT 2 N3 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DA 4 N6 ? ? ? 1_555 D DT 2 O4 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 5 N3 ? ? ? 1_555 D DG 1 N1 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 5 N4 ? ? ? 1_555 D DG 1 O6 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 5 O2 ? ? ? 1_555 D DG 1 N2 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 10 N1 ? ? T DT 7 P DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 10 N6 ? ? T DT 7 P DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 9 N1 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 9 O6 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 9 N2 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C DC 8 N3 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 9 N2 ? ? ? 1_555 C DC 8 O2 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 9 O6 ? ? ? 1_555 C DC 8 N4 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 7 N1 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 7 O6 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 7 N2 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DA 11 N1 ? ? ? 1_555 C DT 6 N3 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DA 11 N6 ? ? ? 1_555 C DT 6 O4 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DT 12 N3 ? ? ? 1_555 C DA 5 N1 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DT 12 O4 ? ? ? 1_555 C DA 5 N6 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DC 13 N3 ? ? ? 1_555 C DG 4 N1 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 13 N4 ? ? ? 1_555 C DG 4 O6 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 13 O2 ? ? ? 1_555 C DG 4 N2 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DA 14 N1 ? ? ? 1_555 C DT 3 N3 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DA 14 N6 ? ? ? 1_555 C DT 3 O4 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DG 15 N1 ? ? ? 1_555 C DC 2 N3 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DG 15 N2 ? ? ? 1_555 C DC 2 O2 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DG 15 O6 ? ? ? 1_555 C DC 2 N4 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DC 16 N3 ? ? ? 1_555 C DG 1 N1 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DC 16 N4 ? ? ? 1_555 C DG 1 O6 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DC 16 O2 ? ? ? 1_555 C DG 1 N2 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A LYS 60 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? A LEU 62 ? A LEU 62 ? 1_555 93.2 ? 2 O ? A LYS 60 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? A VAL 65 ? A VAL 65 ? 1_555 72.3 ? 3 O ? A LEU 62 ? A LEU 62 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? A VAL 65 ? A VAL 65 ? 1_555 79.9 ? 4 O ? A LYS 60 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? D DC 3 ? D DC 3 ? 1_555 143.4 ? 5 O ? A LEU 62 ? A LEU 62 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? D DC 3 ? D DC 3 ? 1_555 88.0 ? 6 O ? A VAL 65 ? A VAL 65 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? D DC 3 ? D DC 3 ? 1_555 71.8 ? 7 O ? A THR 101 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? A VAL 103 ? A VAL 103 ? 1_555 86.4 ? 8 O ? A THR 101 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? A ILE 106 ? A ILE 106 ? 1_555 86.4 ? 9 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? A ILE 106 ? A ILE 106 ? 1_555 75.0 ? 10 O ? A THR 101 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? I HOH . ? A HOH 554 ? 1_555 54.5 ? 11 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? I HOH . ? A HOH 554 ? 1_555 123.9 ? 12 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? I HOH . ? A HOH 554 ? 1_555 130.6 ? 13 O ? A THR 101 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 174.5 ? 14 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 88.9 ? 15 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 89.6 ? 16 O ? I HOH . ? A HOH 554 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 130.9 ? 17 O ? A ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 71.4 ? 18 O ? A ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O1B ? H 0KX . ? A 0KX 404 ? 1_555 156.5 ? 19 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O1B ? H 0KX . ? A 0KX 404 ? 1_555 114.4 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 274 A . ? GLY 274 A SER 275 A ? SER 275 A 1 1.15 2 LEU 301 A . ? LEU 301 A GLY 302 A ? GLY 302 A 1 13.55 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 5 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 150 ? PRO A 151 ? ILE A 150 PRO A 151 AA1 2 SER A 187 ? SER A 188 ? SER A 187 SER A 188 AA2 1 ILE A 174 ? VAL A 177 ? ILE A 174 VAL A 177 AA2 2 MET A 191 ? THR A 196 ? MET A 191 THR A 196 AA2 3 ARG A 253 ? LEU A 259 ? ARG A 253 LEU A 259 AA2 4 LYS A 234 ? CYS A 239 ? LYS A 234 CYS A 239 AA2 5 ILE A 224 ? LYS A 230 ? ILE A 224 LYS A 230 AA3 1 THR A 292 ? ILE A 293 ? THR A 292 ILE A 293 AA3 2 ILE A 298 ? ARG A 299 ? ILE A 298 ARG A 299 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 150 ? N ILE A 150 O SER A 188 ? O SER A 188 AA2 1 2 N THR A 176 ? N THR A 176 O LEU A 194 ? O LEU A 194 AA2 2 3 N LEU A 195 ? N LEU A 195 O ARG A 258 ? O ARG A 258 AA2 3 4 O ARG A 253 ? O ARG A 253 N CYS A 239 ? N CYS A 239 AA2 4 5 O VAL A 238 ? O VAL A 238 N THR A 225 ? N THR A 225 AA3 1 2 N THR A 292 ? N THR A 292 O ARG A 299 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 401 ? 2 'binding site for residue MG A 401' AC2 Software A NA 402 ? 5 'binding site for residue NA A 402' AC3 Software A NA 403 ? 5 'binding site for residue NA A 403' AC4 Software A 0KX 404 ? 13 'binding site for residue 0KX A 404' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ASP A 190 ? ASP A 190 . ? 1_555 ? 2 AC1 2 0KX H . ? 0KX A 404 . ? 1_555 ? 3 AC2 5 THR A 101 ? THR A 101 . ? 1_555 ? 4 AC2 5 VAL A 103 ? VAL A 103 . ? 1_555 ? 5 AC2 5 ILE A 106 ? ILE A 106 . ? 1_555 ? 6 AC2 5 HOH I . ? HOH A 554 . ? 1_555 ? 7 AC2 5 DG C 9 ? DG P 9 . ? 1_555 ? 8 AC3 5 LYS A 60 ? LYS A 60 . ? 1_555 ? 9 AC3 5 LYS A 61 ? LYS A 61 . ? 1_555 ? 10 AC3 5 LEU A 62 ? LEU A 62 . ? 1_555 ? 11 AC3 5 VAL A 65 ? VAL A 65 . ? 1_555 ? 12 AC3 5 DC D 3 ? DC D 3 . ? 1_555 ? 13 AC4 13 ARG A 149 ? ARG A 149 . ? 1_555 ? 14 AC4 13 SER A 180 ? SER A 180 . ? 1_555 ? 15 AC4 13 ARG A 183 ? ARG A 183 . ? 1_555 ? 16 AC4 13 SER A 188 ? SER A 188 . ? 1_555 ? 17 AC4 13 GLY A 189 ? GLY A 189 . ? 1_555 ? 18 AC4 13 ASP A 190 ? ASP A 190 . ? 1_555 ? 19 AC4 13 TYR A 271 ? TYR A 271 . ? 1_555 ? 20 AC4 13 GLY A 274 ? GLY A 274 . ? 1_555 ? 21 AC4 13 ASP A 276 ? ASP A 276 . ? 1_555 ? 22 AC4 13 MG E . ? MG A 401 . ? 1_555 ? 23 AC4 13 HOH I . ? HOH A 541 . ? 1_555 ? 24 AC4 13 DA C 10 ? DA P 10 . ? 1_555 ? 25 AC4 13 7BG B 6 ? 7BG T 6 . ? 1_555 ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OG _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 SER _pdbx_validate_symm_contact.auth_seq_id_1 243 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OE2 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 GLU _pdbx_validate_symm_contact.auth_seq_id_2 288 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_556 _pdbx_validate_symm_contact.dist 1.72 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" T DA 4 ? ? P T DC 5 ? ? 1.509 1.607 -0.098 0.012 Y 2 1 P D DG 1 ? ? OP3 D DG 1 ? ? 1.480 1.607 -0.127 0.012 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 50 ? ? -83.67 36.28 2 1 CYS A 178 ? ? -100.70 -139.94 3 1 GLU A 203 ? ? -97.34 34.88 4 1 ASN A 245 ? ? 52.57 -132.91 5 1 ASN A 294 ? ? -103.05 -166.40 6 1 ASP A 332 ? ? -105.45 49.80 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 THR _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 304 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GLY _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 305 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -139.50 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A ARG 4 ? A ARG 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A ALA 6 ? A ALA 6 7 1 Y 1 A THR 205 ? A THR 205 8 1 Y 1 A LYS 206 ? A LYS 206 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0KX PG P N N 1 0KX O1G O N N 2 0KX O2G O N N 3 0KX O3G O N N 4 0KX PB P N N 5 0KX O1B O N N 6 0KX O2B O N N 7 0KX O3B O N N 8 0KX PA P N N 9 0KX O1A O N N 10 0KX O2A O N N 11 0KX N3A N N N 12 0KX "O5'" O N N 13 0KX "C5'" C N N 14 0KX "C4'" C N R 15 0KX "O4'" O N N 16 0KX "C3'" C N S 17 0KX "O3'" O N N 18 0KX "C2'" C N N 19 0KX "C1'" C N R 20 0KX N1 N N N 21 0KX C2 C N N 22 0KX N3 N N N 23 0KX C4 C N N 24 0KX C5 C N N 25 0KX C6 C N N 26 0KX O2 O N N 27 0KX N4 N N N 28 0KX H1 H N N 29 0KX H2 H N N 30 0KX H3 H N N 31 0KX H4 H N N 32 0KX H5 H N N 33 0KX H6 H N N 34 0KX H7 H N N 35 0KX H8 H N N 36 0KX H9 H N N 37 0KX H10 H N N 38 0KX H11 H N N 39 0KX H12 H N N 40 0KX H13 H N N 41 0KX H14 H N N 42 0KX H15 H N N 43 0KX H16 H N N 44 0KX H17 H N N 45 7BG OP2 O N N 46 7BG P P N N 47 7BG OP1 O N N 48 7BG "O5'" O N N 49 7BG "C5'" C N N 50 7BG "C4'" C N R 51 7BG "O4'" O N N 52 7BG "C3'" C N R 53 7BG "O3'" O N N 54 7BG "C2'" C N S 55 7BG "F1'" F N N 56 7BG "C1'" C N R 57 7BG N9 N Y N 58 7BG C8 C Y N 59 7BG C4 C Y N 60 7BG N3 N N N 61 7BG C2 C N N 62 7BG N2 N N N 63 7BG N1 N N N 64 7BG C6 C N N 65 7BG O6 O N N 66 7BG C5 C Y N 67 7BG N7 N Y N 68 7BG C10 C N N 69 7BG C11 C Y N 70 7BG C12 C Y N 71 7BG C13 C Y N 72 7BG C14 C Y N 73 7BG C15 C Y N 74 7BG C16 C Y N 75 7BG H1 H N N 76 7BG H2 H N N 77 7BG H3 H N N 78 7BG H4 H N N 79 7BG H5 H N N 80 7BG H6 H N N 81 7BG H7 H N N 82 7BG H8 H N N 83 7BG H9 H N N 84 7BG H10 H N N 85 7BG H11 H N N 86 7BG H12 H N N 87 7BG H13 H N N 88 7BG H14 H N N 89 7BG H15 H N N 90 7BG H16 H N N 91 7BG H17 H N N 92 7BG H18 H N N 93 7BG H19 H N N 94 7BG H20 H N N 95 7BG O1 O N N 96 ALA N N N N 97 ALA CA C N S 98 ALA C C N N 99 ALA O O N N 100 ALA CB C N N 101 ALA OXT O N N 102 ALA H H N N 103 ALA H2 H N N 104 ALA HA H N N 105 ALA HB1 H N N 106 ALA HB2 H N N 107 ALA HB3 H N N 108 ALA HXT H N N 109 ARG N N N N 110 ARG CA C N S 111 ARG C C N N 112 ARG O O N N 113 ARG CB C N N 114 ARG CG C N N 115 ARG CD C N N 116 ARG NE N N N 117 ARG CZ C N N 118 ARG NH1 N N N 119 ARG NH2 N N N 120 ARG OXT O N N 121 ARG H H N N 122 ARG H2 H N N 123 ARG HA H N N 124 ARG HB2 H N N 125 ARG HB3 H N N 126 ARG HG2 H N N 127 ARG HG3 H N N 128 ARG HD2 H N N 129 ARG HD3 H N N 130 ARG HE H N N 131 ARG HH11 H N N 132 ARG HH12 H N N 133 ARG HH21 H N N 134 ARG HH22 H N N 135 ARG HXT H N N 136 ASN N N N N 137 ASN CA C N S 138 ASN C C N N 139 ASN O O N N 140 ASN CB C N N 141 ASN CG C N N 142 ASN OD1 O N N 143 ASN ND2 N N N 144 ASN OXT O N N 145 ASN H H N N 146 ASN H2 H N N 147 ASN HA H N N 148 ASN HB2 H N N 149 ASN HB3 H N N 150 ASN HD21 H N N 151 ASN HD22 H N N 152 ASN HXT H N N 153 ASP N N N N 154 ASP CA C N S 155 ASP C C N N 156 ASP O O N N 157 ASP CB C N N 158 ASP CG C N N 159 ASP OD1 O N N 160 ASP OD2 O N N 161 ASP OXT O N N 162 ASP H H N N 163 ASP H2 H N N 164 ASP HA H N N 165 ASP HB2 H N N 166 ASP HB3 H N N 167 ASP HD2 H N N 168 ASP HXT H N N 169 CYS N N N N 170 CYS CA C N R 171 CYS C C N N 172 CYS O O N N 173 CYS CB C N N 174 CYS SG S N N 175 CYS OXT O N N 176 CYS H H N N 177 CYS H2 H N N 178 CYS HA H N N 179 CYS HB2 H N N 180 CYS HB3 H N N 181 CYS HG H N N 182 CYS HXT H N N 183 DA OP3 O N N 184 DA P P N N 185 DA OP1 O N N 186 DA OP2 O N N 187 DA "O5'" O N N 188 DA "C5'" C N N 189 DA "C4'" C N R 190 DA "O4'" O N N 191 DA "C3'" C N S 192 DA "O3'" O N N 193 DA "C2'" C N N 194 DA "C1'" C N R 195 DA N9 N Y N 196 DA C8 C Y N 197 DA N7 N Y N 198 DA C5 C Y N 199 DA C6 C Y N 200 DA N6 N N N 201 DA N1 N Y N 202 DA C2 C Y N 203 DA N3 N Y N 204 DA C4 C Y N 205 DA HOP3 H N N 206 DA HOP2 H N N 207 DA "H5'" H N N 208 DA "H5''" H N N 209 DA "H4'" H N N 210 DA "H3'" H N N 211 DA "HO3'" H N N 212 DA "H2'" H N N 213 DA "H2''" H N N 214 DA "H1'" H N N 215 DA H8 H N N 216 DA H61 H N N 217 DA H62 H N N 218 DA H2 H N N 219 DC OP3 O N N 220 DC P P N N 221 DC OP1 O N N 222 DC OP2 O N N 223 DC "O5'" O N N 224 DC "C5'" C N N 225 DC "C4'" C N R 226 DC "O4'" O N N 227 DC "C3'" C N S 228 DC "O3'" O N N 229 DC "C2'" C N N 230 DC "C1'" C N R 231 DC N1 N N N 232 DC C2 C N N 233 DC O2 O N N 234 DC N3 N N N 235 DC C4 C N N 236 DC N4 N N N 237 DC C5 C N N 238 DC C6 C N N 239 DC HOP3 H N N 240 DC HOP2 H N N 241 DC "H5'" H N N 242 DC "H5''" H N N 243 DC "H4'" H N N 244 DC "H3'" H N N 245 DC "HO3'" H N N 246 DC "H2'" H N N 247 DC "H2''" H N N 248 DC "H1'" H N N 249 DC H41 H N N 250 DC H42 H N N 251 DC H5 H N N 252 DC H6 H N N 253 DG OP3 O N N 254 DG P P N N 255 DG OP1 O N N 256 DG OP2 O N N 257 DG "O5'" O N N 258 DG "C5'" C N N 259 DG "C4'" C N R 260 DG "O4'" O N N 261 DG "C3'" C N S 262 DG "O3'" O N N 263 DG "C2'" C N N 264 DG "C1'" C N R 265 DG N9 N Y N 266 DG C8 C Y N 267 DG N7 N Y N 268 DG C5 C Y N 269 DG C6 C N N 270 DG O6 O N N 271 DG N1 N N N 272 DG C2 C N N 273 DG N2 N N N 274 DG N3 N N N 275 DG C4 C Y N 276 DG HOP3 H N N 277 DG HOP2 H N N 278 DG "H5'" H N N 279 DG "H5''" H N N 280 DG "H4'" H N N 281 DG "H3'" H N N 282 DG "HO3'" H N N 283 DG "H2'" H N N 284 DG "H2''" H N N 285 DG "H1'" H N N 286 DG H8 H N N 287 DG H1 H N N 288 DG H21 H N N 289 DG H22 H N N 290 DT OP3 O N N 291 DT P P N N 292 DT OP1 O N N 293 DT OP2 O N N 294 DT "O5'" O N N 295 DT "C5'" C N N 296 DT "C4'" C N R 297 DT "O4'" O N N 298 DT "C3'" C N S 299 DT "O3'" O N N 300 DT "C2'" C N N 301 DT "C1'" C N R 302 DT N1 N N N 303 DT C2 C N N 304 DT O2 O N N 305 DT N3 N N N 306 DT C4 C N N 307 DT O4 O N N 308 DT C5 C N N 309 DT C7 C N N 310 DT C6 C N N 311 DT HOP3 H N N 312 DT HOP2 H N N 313 DT "H5'" H N N 314 DT "H5''" H N N 315 DT "H4'" H N N 316 DT "H3'" H N N 317 DT "HO3'" H N N 318 DT "H2'" H N N 319 DT "H2''" H N N 320 DT "H1'" H N N 321 DT H3 H N N 322 DT H71 H N N 323 DT H72 H N N 324 DT H73 H N N 325 DT H6 H N N 326 GLN N N N N 327 GLN CA C N S 328 GLN C C N N 329 GLN O O N N 330 GLN CB C N N 331 GLN CG C N N 332 GLN CD C N N 333 GLN OE1 O N N 334 GLN NE2 N N N 335 GLN OXT O N N 336 GLN H H N N 337 GLN H2 H N N 338 GLN HA H N N 339 GLN HB2 H N N 340 GLN HB3 H N N 341 GLN HG2 H N N 342 GLN HG3 H N N 343 GLN HE21 H N N 344 GLN HE22 H N N 345 GLN HXT H N N 346 GLU N N N N 347 GLU CA C N S 348 GLU C C N N 349 GLU O O N N 350 GLU CB C N N 351 GLU CG C N N 352 GLU CD C N N 353 GLU OE1 O N N 354 GLU OE2 O N N 355 GLU OXT O N N 356 GLU H H N N 357 GLU H2 H N N 358 GLU HA H N N 359 GLU HB2 H N N 360 GLU HB3 H N N 361 GLU HG2 H N N 362 GLU HG3 H N N 363 GLU HE2 H N N 364 GLU HXT H N N 365 GLY N N N N 366 GLY CA C N N 367 GLY C C N N 368 GLY O O N N 369 GLY OXT O N N 370 GLY H H N N 371 GLY H2 H N N 372 GLY HA2 H N N 373 GLY HA3 H N N 374 GLY HXT H N N 375 HIS N N N N 376 HIS CA C N S 377 HIS C C N N 378 HIS O O N N 379 HIS CB C N N 380 HIS CG C Y N 381 HIS ND1 N Y N 382 HIS CD2 C Y N 383 HIS CE1 C Y N 384 HIS NE2 N Y N 385 HIS OXT O N N 386 HIS H H N N 387 HIS H2 H N N 388 HIS HA H N N 389 HIS HB2 H N N 390 HIS HB3 H N N 391 HIS HD1 H N N 392 HIS HD2 H N N 393 HIS HE1 H N N 394 HIS HE2 H N N 395 HIS HXT H N N 396 HOH O O N N 397 HOH H1 H N N 398 HOH H2 H N N 399 ILE N N N N 400 ILE CA C N S 401 ILE C C N N 402 ILE O O N N 403 ILE CB C N S 404 ILE CG1 C N N 405 ILE CG2 C N N 406 ILE CD1 C N N 407 ILE OXT O N N 408 ILE H H N N 409 ILE H2 H N N 410 ILE HA H N N 411 ILE HB H N N 412 ILE HG12 H N N 413 ILE HG13 H N N 414 ILE HG21 H N N 415 ILE HG22 H N N 416 ILE HG23 H N N 417 ILE HD11 H N N 418 ILE HD12 H N N 419 ILE HD13 H N N 420 ILE HXT H N N 421 LEU N N N N 422 LEU CA C N S 423 LEU C C N N 424 LEU O O N N 425 LEU CB C N N 426 LEU CG C N N 427 LEU CD1 C N N 428 LEU CD2 C N N 429 LEU OXT O N N 430 LEU H H N N 431 LEU H2 H N N 432 LEU HA H N N 433 LEU HB2 H N N 434 LEU HB3 H N N 435 LEU HG H N N 436 LEU HD11 H N N 437 LEU HD12 H N N 438 LEU HD13 H N N 439 LEU HD21 H N N 440 LEU HD22 H N N 441 LEU HD23 H N N 442 LEU HXT H N N 443 LYS N N N N 444 LYS CA C N S 445 LYS C C N N 446 LYS O O N N 447 LYS CB C N N 448 LYS CG C N N 449 LYS CD C N N 450 LYS CE C N N 451 LYS NZ N N N 452 LYS OXT O N N 453 LYS H H N N 454 LYS H2 H N N 455 LYS HA H N N 456 LYS HB2 H N N 457 LYS HB3 H N N 458 LYS HG2 H N N 459 LYS HG3 H N N 460 LYS HD2 H N N 461 LYS HD3 H N N 462 LYS HE2 H N N 463 LYS HE3 H N N 464 LYS HZ1 H N N 465 LYS HZ2 H N N 466 LYS HZ3 H N N 467 LYS HXT H N N 468 MET N N N N 469 MET CA C N S 470 MET C C N N 471 MET O O N N 472 MET CB C N N 473 MET CG C N N 474 MET SD S N N 475 MET CE C N N 476 MET OXT O N N 477 MET H H N N 478 MET H2 H N N 479 MET HA H N N 480 MET HB2 H N N 481 MET HB3 H N N 482 MET HG2 H N N 483 MET HG3 H N N 484 MET HE1 H N N 485 MET HE2 H N N 486 MET HE3 H N N 487 MET HXT H N N 488 MG MG MG N N 489 NA NA NA N N 490 PHE N N N N 491 PHE CA C N S 492 PHE C C N N 493 PHE O O N N 494 PHE CB C N N 495 PHE CG C Y N 496 PHE CD1 C Y N 497 PHE CD2 C Y N 498 PHE CE1 C Y N 499 PHE CE2 C Y N 500 PHE CZ C Y N 501 PHE OXT O N N 502 PHE H H N N 503 PHE H2 H N N 504 PHE HA H N N 505 PHE HB2 H N N 506 PHE HB3 H N N 507 PHE HD1 H N N 508 PHE HD2 H N N 509 PHE HE1 H N N 510 PHE HE2 H N N 511 PHE HZ H N N 512 PHE HXT H N N 513 PRO N N N N 514 PRO CA C N S 515 PRO C C N N 516 PRO O O N N 517 PRO CB C N N 518 PRO CG C N N 519 PRO CD C N N 520 PRO OXT O N N 521 PRO H H N N 522 PRO HA H N N 523 PRO HB2 H N N 524 PRO HB3 H N N 525 PRO HG2 H N N 526 PRO HG3 H N N 527 PRO HD2 H N N 528 PRO HD3 H N N 529 PRO HXT H N N 530 SER N N N N 531 SER CA C N S 532 SER C C N N 533 SER O O N N 534 SER CB C N N 535 SER OG O N N 536 SER OXT O N N 537 SER H H N N 538 SER H2 H N N 539 SER HA H N N 540 SER HB2 H N N 541 SER HB3 H N N 542 SER HG H N N 543 SER HXT H N N 544 THR N N N N 545 THR CA C N S 546 THR C C N N 547 THR O O N N 548 THR CB C N R 549 THR OG1 O N N 550 THR CG2 C N N 551 THR OXT O N N 552 THR H H N N 553 THR H2 H N N 554 THR HA H N N 555 THR HB H N N 556 THR HG1 H N N 557 THR HG21 H N N 558 THR HG22 H N N 559 THR HG23 H N N 560 THR HXT H N N 561 TRP N N N N 562 TRP CA C N S 563 TRP C C N N 564 TRP O O N N 565 TRP CB C N N 566 TRP CG C Y N 567 TRP CD1 C Y N 568 TRP CD2 C Y N 569 TRP NE1 N Y N 570 TRP CE2 C Y N 571 TRP CE3 C Y N 572 TRP CZ2 C Y N 573 TRP CZ3 C Y N 574 TRP CH2 C Y N 575 TRP OXT O N N 576 TRP H H N N 577 TRP H2 H N N 578 TRP HA H N N 579 TRP HB2 H N N 580 TRP HB3 H N N 581 TRP HD1 H N N 582 TRP HE1 H N N 583 TRP HE3 H N N 584 TRP HZ2 H N N 585 TRP HZ3 H N N 586 TRP HH2 H N N 587 TRP HXT H N N 588 TYR N N N N 589 TYR CA C N S 590 TYR C C N N 591 TYR O O N N 592 TYR CB C N N 593 TYR CG C Y N 594 TYR CD1 C Y N 595 TYR CD2 C Y N 596 TYR CE1 C Y N 597 TYR CE2 C Y N 598 TYR CZ C Y N 599 TYR OH O N N 600 TYR OXT O N N 601 TYR H H N N 602 TYR H2 H N N 603 TYR HA H N N 604 TYR HB2 H N N 605 TYR HB3 H N N 606 TYR HD1 H N N 607 TYR HD2 H N N 608 TYR HE1 H N N 609 TYR HE2 H N N 610 TYR HH H N N 611 TYR HXT H N N 612 VAL N N N N 613 VAL CA C N S 614 VAL C C N N 615 VAL O O N N 616 VAL CB C N N 617 VAL CG1 C N N 618 VAL CG2 C N N 619 VAL OXT O N N 620 VAL H H N N 621 VAL H2 H N N 622 VAL HA H N N 623 VAL HB H N N 624 VAL HG11 H N N 625 VAL HG12 H N N 626 VAL HG13 H N N 627 VAL HG21 H N N 628 VAL HG22 H N N 629 VAL HG23 H N N 630 VAL HXT H N N 631 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0KX "O4'" "C4'" sing N N 1 0KX "O4'" "C1'" sing N N 2 0KX "C4'" "C5'" sing N N 3 0KX "C4'" "C3'" sing N N 4 0KX "C5'" "O5'" sing N N 5 0KX "C1'" N1 sing N N 6 0KX "C1'" "C2'" sing N N 7 0KX "O5'" PA sing N N 8 0KX O1A PA doub N N 9 0KX O2 C2 doub N N 10 0KX N1 C2 sing N N 11 0KX N1 C6 sing N N 12 0KX "C3'" "C2'" sing N N 13 0KX "C3'" "O3'" sing N N 14 0KX C2 N3 sing N N 15 0KX C6 C5 doub N N 16 0KX O2B PB doub N N 17 0KX PA O2A sing N N 18 0KX PA N3A sing N N 19 0KX N3 C4 doub N N 20 0KX C5 C4 sing N N 21 0KX C4 N4 sing N N 22 0KX O2G PG doub N N 23 0KX PB N3A sing N N 24 0KX PB O1B sing N N 25 0KX PB O3B sing N N 26 0KX PG O3B sing N N 27 0KX PG O3G sing N N 28 0KX PG O1G sing N N 29 0KX O1G H1 sing N N 30 0KX O3G H2 sing N N 31 0KX O1B H3 sing N N 32 0KX O2A H4 sing N N 33 0KX N3A H5 sing N N 34 0KX "C5'" H6 sing N N 35 0KX "C5'" H7 sing N N 36 0KX "C4'" H8 sing N N 37 0KX "C3'" H9 sing N N 38 0KX "O3'" H10 sing N N 39 0KX "C2'" H11 sing N N 40 0KX "C2'" H12 sing N N 41 0KX "C1'" H13 sing N N 42 0KX C5 H14 sing N N 43 0KX C6 H15 sing N N 44 0KX N4 H16 sing N N 45 0KX N4 H17 sing N N 46 7BG OP2 P sing N N 47 7BG OP1 P sing N N 48 7BG P "O5'" sing N N 49 7BG "O3'" "C3'" sing N N 50 7BG "O5'" "C5'" sing N N 51 7BG "C5'" "C4'" sing N N 52 7BG "C4'" "C3'" sing N N 53 7BG "C4'" "O4'" sing N N 54 7BG "C3'" "C2'" sing N N 55 7BG "O4'" "C1'" sing N N 56 7BG "C2'" "C1'" sing N N 57 7BG "C2'" "F1'" sing N N 58 7BG "C1'" N9 sing N N 59 7BG N9 C8 sing Y N 60 7BG N9 C4 sing Y N 61 7BG C8 N7 doub Y N 62 7BG C4 N3 sing N N 63 7BG C4 C5 doub Y N 64 7BG N3 C2 doub N N 65 7BG N7 C5 sing Y N 66 7BG N7 C10 sing N N 67 7BG C16 C15 doub Y N 68 7BG C16 C11 sing Y N 69 7BG C15 C14 sing Y N 70 7BG C5 C6 sing N N 71 7BG C2 N2 sing N N 72 7BG C2 N1 sing N N 73 7BG C10 C11 sing N N 74 7BG C11 C12 doub Y N 75 7BG C6 N1 sing N N 76 7BG C6 O6 doub N N 77 7BG C14 C13 doub Y N 78 7BG C12 C13 sing Y N 79 7BG OP2 H1 sing N N 80 7BG OP1 H2 sing N N 81 7BG "C5'" H3 sing N N 82 7BG "C5'" H4 sing N N 83 7BG "C4'" H5 sing N N 84 7BG "C3'" H6 sing N N 85 7BG "O3'" H7 sing N N 86 7BG "C2'" H8 sing N N 87 7BG "C1'" H9 sing N N 88 7BG C8 H10 sing N N 89 7BG N2 H11 sing N N 90 7BG N2 H12 sing N N 91 7BG N1 H13 sing N N 92 7BG C10 H14 sing N N 93 7BG C10 H15 sing N N 94 7BG C12 H16 sing N N 95 7BG C13 H17 sing N N 96 7BG C14 H18 sing N N 97 7BG C15 H19 sing N N 98 7BG C16 H20 sing N N 99 7BG P O1 doub N N 100 ALA N CA sing N N 101 ALA N H sing N N 102 ALA N H2 sing N N 103 ALA CA C sing N N 104 ALA CA CB sing N N 105 ALA CA HA sing N N 106 ALA C O doub N N 107 ALA C OXT sing N N 108 ALA CB HB1 sing N N 109 ALA CB HB2 sing N N 110 ALA CB HB3 sing N N 111 ALA OXT HXT sing N N 112 ARG N CA sing N N 113 ARG N H sing N N 114 ARG N H2 sing N N 115 ARG CA C sing N N 116 ARG CA CB sing N N 117 ARG CA HA sing N N 118 ARG C O doub N N 119 ARG C OXT sing N N 120 ARG CB CG sing N N 121 ARG CB HB2 sing N N 122 ARG CB HB3 sing N N 123 ARG CG CD sing N N 124 ARG CG HG2 sing N N 125 ARG CG HG3 sing N N 126 ARG CD NE sing N N 127 ARG CD HD2 sing N N 128 ARG CD HD3 sing N N 129 ARG NE CZ sing N N 130 ARG NE HE sing N N 131 ARG CZ NH1 sing N N 132 ARG CZ NH2 doub N N 133 ARG NH1 HH11 sing N N 134 ARG NH1 HH12 sing N N 135 ARG NH2 HH21 sing N N 136 ARG NH2 HH22 sing N N 137 ARG OXT HXT sing N N 138 ASN N CA sing N N 139 ASN N H sing N N 140 ASN N H2 sing N N 141 ASN CA C sing N N 142 ASN CA CB sing N N 143 ASN CA HA sing N N 144 ASN C O doub N N 145 ASN C OXT sing N N 146 ASN CB CG sing N N 147 ASN CB HB2 sing N N 148 ASN CB HB3 sing N N 149 ASN CG OD1 doub N N 150 ASN CG ND2 sing N N 151 ASN ND2 HD21 sing N N 152 ASN ND2 HD22 sing N N 153 ASN OXT HXT sing N N 154 ASP N CA sing N N 155 ASP N H sing N N 156 ASP N H2 sing N N 157 ASP CA C sing N N 158 ASP CA CB sing N N 159 ASP CA HA sing N N 160 ASP C O doub N N 161 ASP C OXT sing N N 162 ASP CB CG sing N N 163 ASP CB HB2 sing N N 164 ASP CB HB3 sing N N 165 ASP CG OD1 doub N N 166 ASP CG OD2 sing N N 167 ASP OD2 HD2 sing N N 168 ASP OXT HXT sing N N 169 CYS N CA sing N N 170 CYS N H sing N N 171 CYS N H2 sing N N 172 CYS CA C sing N N 173 CYS CA CB sing N N 174 CYS CA HA sing N N 175 CYS C O doub N N 176 CYS C OXT sing N N 177 CYS CB SG sing N N 178 CYS CB HB2 sing N N 179 CYS CB HB3 sing N N 180 CYS SG HG sing N N 181 CYS OXT HXT sing N N 182 DA OP3 P sing N N 183 DA OP3 HOP3 sing N N 184 DA P OP1 doub N N 185 DA P OP2 sing N N 186 DA P "O5'" sing N N 187 DA OP2 HOP2 sing N N 188 DA "O5'" "C5'" sing N N 189 DA "C5'" "C4'" sing N N 190 DA "C5'" "H5'" sing N N 191 DA "C5'" "H5''" sing N N 192 DA "C4'" "O4'" sing N N 193 DA "C4'" "C3'" sing N N 194 DA "C4'" "H4'" sing N N 195 DA "O4'" "C1'" sing N N 196 DA "C3'" "O3'" sing N N 197 DA "C3'" "C2'" sing N N 198 DA "C3'" "H3'" sing N N 199 DA "O3'" "HO3'" sing N N 200 DA "C2'" "C1'" sing N N 201 DA "C2'" "H2'" sing N N 202 DA "C2'" "H2''" sing N N 203 DA "C1'" N9 sing N N 204 DA "C1'" "H1'" sing N N 205 DA N9 C8 sing Y N 206 DA N9 C4 sing Y N 207 DA C8 N7 doub Y N 208 DA C8 H8 sing N N 209 DA N7 C5 sing Y N 210 DA C5 C6 sing Y N 211 DA C5 C4 doub Y N 212 DA C6 N6 sing N N 213 DA C6 N1 doub Y N 214 DA N6 H61 sing N N 215 DA N6 H62 sing N N 216 DA N1 C2 sing Y N 217 DA C2 N3 doub Y N 218 DA C2 H2 sing N N 219 DA N3 C4 sing Y N 220 DC OP3 P sing N N 221 DC OP3 HOP3 sing N N 222 DC P OP1 doub N N 223 DC P OP2 sing N N 224 DC P "O5'" sing N N 225 DC OP2 HOP2 sing N N 226 DC "O5'" "C5'" sing N N 227 DC "C5'" "C4'" sing N N 228 DC "C5'" "H5'" sing N N 229 DC "C5'" "H5''" sing N N 230 DC "C4'" "O4'" sing N N 231 DC "C4'" "C3'" sing N N 232 DC "C4'" "H4'" sing N N 233 DC "O4'" "C1'" sing N N 234 DC "C3'" "O3'" sing N N 235 DC "C3'" "C2'" sing N N 236 DC "C3'" "H3'" sing N N 237 DC "O3'" "HO3'" sing N N 238 DC "C2'" "C1'" sing N N 239 DC "C2'" "H2'" sing N N 240 DC "C2'" "H2''" sing N N 241 DC "C1'" N1 sing N N 242 DC "C1'" "H1'" sing N N 243 DC N1 C2 sing N N 244 DC N1 C6 sing N N 245 DC C2 O2 doub N N 246 DC C2 N3 sing N N 247 DC N3 C4 doub N N 248 DC C4 N4 sing N N 249 DC C4 C5 sing N N 250 DC N4 H41 sing N N 251 DC N4 H42 sing N N 252 DC C5 C6 doub N N 253 DC C5 H5 sing N N 254 DC C6 H6 sing N N 255 DG OP3 P sing N N 256 DG OP3 HOP3 sing N N 257 DG P OP1 doub N N 258 DG P OP2 sing N N 259 DG P "O5'" sing N N 260 DG OP2 HOP2 sing N N 261 DG "O5'" "C5'" sing N N 262 DG "C5'" "C4'" sing N N 263 DG "C5'" "H5'" sing N N 264 DG "C5'" "H5''" sing N N 265 DG "C4'" "O4'" sing N N 266 DG "C4'" "C3'" sing N N 267 DG "C4'" "H4'" sing N N 268 DG "O4'" "C1'" sing N N 269 DG "C3'" "O3'" sing N N 270 DG "C3'" "C2'" sing N N 271 DG "C3'" "H3'" sing N N 272 DG "O3'" "HO3'" sing N N 273 DG "C2'" "C1'" sing N N 274 DG "C2'" "H2'" sing N N 275 DG "C2'" "H2''" sing N N 276 DG "C1'" N9 sing N N 277 DG "C1'" "H1'" sing N N 278 DG N9 C8 sing Y N 279 DG N9 C4 sing Y N 280 DG C8 N7 doub Y N 281 DG C8 H8 sing N N 282 DG N7 C5 sing Y N 283 DG C5 C6 sing N N 284 DG C5 C4 doub Y N 285 DG C6 O6 doub N N 286 DG C6 N1 sing N N 287 DG N1 C2 sing N N 288 DG N1 H1 sing N N 289 DG C2 N2 sing N N 290 DG C2 N3 doub N N 291 DG N2 H21 sing N N 292 DG N2 H22 sing N N 293 DG N3 C4 sing N N 294 DT OP3 P sing N N 295 DT OP3 HOP3 sing N N 296 DT P OP1 doub N N 297 DT P OP2 sing N N 298 DT P "O5'" sing N N 299 DT OP2 HOP2 sing N N 300 DT "O5'" "C5'" sing N N 301 DT "C5'" "C4'" sing N N 302 DT "C5'" "H5'" sing N N 303 DT "C5'" "H5''" sing N N 304 DT "C4'" "O4'" sing N N 305 DT "C4'" "C3'" sing N N 306 DT "C4'" "H4'" sing N N 307 DT "O4'" "C1'" sing N N 308 DT "C3'" "O3'" sing N N 309 DT "C3'" "C2'" sing N N 310 DT "C3'" "H3'" sing N N 311 DT "O3'" "HO3'" sing N N 312 DT "C2'" "C1'" sing N N 313 DT "C2'" "H2'" sing N N 314 DT "C2'" "H2''" sing N N 315 DT "C1'" N1 sing N N 316 DT "C1'" "H1'" sing N N 317 DT N1 C2 sing N N 318 DT N1 C6 sing N N 319 DT C2 O2 doub N N 320 DT C2 N3 sing N N 321 DT N3 C4 sing N N 322 DT N3 H3 sing N N 323 DT C4 O4 doub N N 324 DT C4 C5 sing N N 325 DT C5 C7 sing N N 326 DT C5 C6 doub N N 327 DT C7 H71 sing N N 328 DT C7 H72 sing N N 329 DT C7 H73 sing N N 330 DT C6 H6 sing N N 331 GLN N CA sing N N 332 GLN N H sing N N 333 GLN N H2 sing N N 334 GLN CA C sing N N 335 GLN CA CB sing N N 336 GLN CA HA sing N N 337 GLN C O doub N N 338 GLN C OXT sing N N 339 GLN CB CG sing N N 340 GLN CB HB2 sing N N 341 GLN CB HB3 sing N N 342 GLN CG CD sing N N 343 GLN CG HG2 sing N N 344 GLN CG HG3 sing N N 345 GLN CD OE1 doub N N 346 GLN CD NE2 sing N N 347 GLN NE2 HE21 sing N N 348 GLN NE2 HE22 sing N N 349 GLN OXT HXT sing N N 350 GLU N CA sing N N 351 GLU N H sing N N 352 GLU N H2 sing N N 353 GLU CA C sing N N 354 GLU CA CB sing N N 355 GLU CA HA sing N N 356 GLU C O doub N N 357 GLU C OXT sing N N 358 GLU CB CG sing N N 359 GLU CB HB2 sing N N 360 GLU CB HB3 sing N N 361 GLU CG CD sing N N 362 GLU CG HG2 sing N N 363 GLU CG HG3 sing N N 364 GLU CD OE1 doub N N 365 GLU CD OE2 sing N N 366 GLU OE2 HE2 sing N N 367 GLU OXT HXT sing N N 368 GLY N CA sing N N 369 GLY N H sing N N 370 GLY N H2 sing N N 371 GLY CA C sing N N 372 GLY CA HA2 sing N N 373 GLY CA HA3 sing N N 374 GLY C O doub N N 375 GLY C OXT sing N N 376 GLY OXT HXT sing N N 377 HIS N CA sing N N 378 HIS N H sing N N 379 HIS N H2 sing N N 380 HIS CA C sing N N 381 HIS CA CB sing N N 382 HIS CA HA sing N N 383 HIS C O doub N N 384 HIS C OXT sing N N 385 HIS CB CG sing N N 386 HIS CB HB2 sing N N 387 HIS CB HB3 sing N N 388 HIS CG ND1 sing Y N 389 HIS CG CD2 doub Y N 390 HIS ND1 CE1 doub Y N 391 HIS ND1 HD1 sing N N 392 HIS CD2 NE2 sing Y N 393 HIS CD2 HD2 sing N N 394 HIS CE1 NE2 sing Y N 395 HIS CE1 HE1 sing N N 396 HIS NE2 HE2 sing N N 397 HIS OXT HXT sing N N 398 HOH O H1 sing N N 399 HOH O H2 sing N N 400 ILE N CA sing N N 401 ILE N H sing N N 402 ILE N H2 sing N N 403 ILE CA C sing N N 404 ILE CA CB sing N N 405 ILE CA HA sing N N 406 ILE C O doub N N 407 ILE C OXT sing N N 408 ILE CB CG1 sing N N 409 ILE CB CG2 sing N N 410 ILE CB HB sing N N 411 ILE CG1 CD1 sing N N 412 ILE CG1 HG12 sing N N 413 ILE CG1 HG13 sing N N 414 ILE CG2 HG21 sing N N 415 ILE CG2 HG22 sing N N 416 ILE CG2 HG23 sing N N 417 ILE CD1 HD11 sing N N 418 ILE CD1 HD12 sing N N 419 ILE CD1 HD13 sing N N 420 ILE OXT HXT sing N N 421 LEU N CA sing N N 422 LEU N H sing N N 423 LEU N H2 sing N N 424 LEU CA C sing N N 425 LEU CA CB sing N N 426 LEU CA HA sing N N 427 LEU C O doub N N 428 LEU C OXT sing N N 429 LEU CB CG sing N N 430 LEU CB HB2 sing N N 431 LEU CB HB3 sing N N 432 LEU CG CD1 sing N N 433 LEU CG CD2 sing N N 434 LEU CG HG sing N N 435 LEU CD1 HD11 sing N N 436 LEU CD1 HD12 sing N N 437 LEU CD1 HD13 sing N N 438 LEU CD2 HD21 sing N N 439 LEU CD2 HD22 sing N N 440 LEU CD2 HD23 sing N N 441 LEU OXT HXT sing N N 442 LYS N CA sing N N 443 LYS N H sing N N 444 LYS N H2 sing N N 445 LYS CA C sing N N 446 LYS CA CB sing N N 447 LYS CA HA sing N N 448 LYS C O doub N N 449 LYS C OXT sing N N 450 LYS CB CG sing N N 451 LYS CB HB2 sing N N 452 LYS CB HB3 sing N N 453 LYS CG CD sing N N 454 LYS CG HG2 sing N N 455 LYS CG HG3 sing N N 456 LYS CD CE sing N N 457 LYS CD HD2 sing N N 458 LYS CD HD3 sing N N 459 LYS CE NZ sing N N 460 LYS CE HE2 sing N N 461 LYS CE HE3 sing N N 462 LYS NZ HZ1 sing N N 463 LYS NZ HZ2 sing N N 464 LYS NZ HZ3 sing N N 465 LYS OXT HXT sing N N 466 MET N CA sing N N 467 MET N H sing N N 468 MET N H2 sing N N 469 MET CA C sing N N 470 MET CA CB sing N N 471 MET CA HA sing N N 472 MET C O doub N N 473 MET C OXT sing N N 474 MET CB CG sing N N 475 MET CB HB2 sing N N 476 MET CB HB3 sing N N 477 MET CG SD sing N N 478 MET CG HG2 sing N N 479 MET CG HG3 sing N N 480 MET SD CE sing N N 481 MET CE HE1 sing N N 482 MET CE HE2 sing N N 483 MET CE HE3 sing N N 484 MET OXT HXT sing N N 485 PHE N CA sing N N 486 PHE N H sing N N 487 PHE N H2 sing N N 488 PHE CA C sing N N 489 PHE CA CB sing N N 490 PHE CA HA sing N N 491 PHE C O doub N N 492 PHE C OXT sing N N 493 PHE CB CG sing N N 494 PHE CB HB2 sing N N 495 PHE CB HB3 sing N N 496 PHE CG CD1 doub Y N 497 PHE CG CD2 sing Y N 498 PHE CD1 CE1 sing Y N 499 PHE CD1 HD1 sing N N 500 PHE CD2 CE2 doub Y N 501 PHE CD2 HD2 sing N N 502 PHE CE1 CZ doub Y N 503 PHE CE1 HE1 sing N N 504 PHE CE2 CZ sing Y N 505 PHE CE2 HE2 sing N N 506 PHE CZ HZ sing N N 507 PHE OXT HXT sing N N 508 PRO N CA sing N N 509 PRO N CD sing N N 510 PRO N H sing N N 511 PRO CA C sing N N 512 PRO CA CB sing N N 513 PRO CA HA sing N N 514 PRO C O doub N N 515 PRO C OXT sing N N 516 PRO CB CG sing N N 517 PRO CB HB2 sing N N 518 PRO CB HB3 sing N N 519 PRO CG CD sing N N 520 PRO CG HG2 sing N N 521 PRO CG HG3 sing N N 522 PRO CD HD2 sing N N 523 PRO CD HD3 sing N N 524 PRO OXT HXT sing N N 525 SER N CA sing N N 526 SER N H sing N N 527 SER N H2 sing N N 528 SER CA C sing N N 529 SER CA CB sing N N 530 SER CA HA sing N N 531 SER C O doub N N 532 SER C OXT sing N N 533 SER CB OG sing N N 534 SER CB HB2 sing N N 535 SER CB HB3 sing N N 536 SER OG HG sing N N 537 SER OXT HXT sing N N 538 THR N CA sing N N 539 THR N H sing N N 540 THR N H2 sing N N 541 THR CA C sing N N 542 THR CA CB sing N N 543 THR CA HA sing N N 544 THR C O doub N N 545 THR C OXT sing N N 546 THR CB OG1 sing N N 547 THR CB CG2 sing N N 548 THR CB HB sing N N 549 THR OG1 HG1 sing N N 550 THR CG2 HG21 sing N N 551 THR CG2 HG22 sing N N 552 THR CG2 HG23 sing N N 553 THR OXT HXT sing N N 554 TRP N CA sing N N 555 TRP N H sing N N 556 TRP N H2 sing N N 557 TRP CA C sing N N 558 TRP CA CB sing N N 559 TRP CA HA sing N N 560 TRP C O doub N N 561 TRP C OXT sing N N 562 TRP CB CG sing N N 563 TRP CB HB2 sing N N 564 TRP CB HB3 sing N N 565 TRP CG CD1 doub Y N 566 TRP CG CD2 sing Y N 567 TRP CD1 NE1 sing Y N 568 TRP CD1 HD1 sing N N 569 TRP CD2 CE2 doub Y N 570 TRP CD2 CE3 sing Y N 571 TRP NE1 CE2 sing Y N 572 TRP NE1 HE1 sing N N 573 TRP CE2 CZ2 sing Y N 574 TRP CE3 CZ3 doub Y N 575 TRP CE3 HE3 sing N N 576 TRP CZ2 CH2 doub Y N 577 TRP CZ2 HZ2 sing N N 578 TRP CZ3 CH2 sing Y N 579 TRP CZ3 HZ3 sing N N 580 TRP CH2 HH2 sing N N 581 TRP OXT HXT sing N N 582 TYR N CA sing N N 583 TYR N H sing N N 584 TYR N H2 sing N N 585 TYR CA C sing N N 586 TYR CA CB sing N N 587 TYR CA HA sing N N 588 TYR C O doub N N 589 TYR C OXT sing N N 590 TYR CB CG sing N N 591 TYR CB HB2 sing N N 592 TYR CB HB3 sing N N 593 TYR CG CD1 doub Y N 594 TYR CG CD2 sing Y N 595 TYR CD1 CE1 sing Y N 596 TYR CD1 HD1 sing N N 597 TYR CD2 CE2 doub Y N 598 TYR CD2 HD2 sing N N 599 TYR CE1 CZ doub Y N 600 TYR CE1 HE1 sing N N 601 TYR CE2 CZ sing Y N 602 TYR CE2 HE2 sing N N 603 TYR CZ OH sing N N 604 TYR OH HH sing N N 605 TYR OXT HXT sing N N 606 VAL N CA sing N N 607 VAL N H sing N N 608 VAL N H2 sing N N 609 VAL CA C sing N N 610 VAL CA CB sing N N 611 VAL CA HA sing N N 612 VAL C O doub N N 613 VAL C OXT sing N N 614 VAL CB CG1 sing N N 615 VAL CB CG2 sing N N 616 VAL CB HB sing N N 617 VAL CG1 HG11 sing N N 618 VAL CG1 HG12 sing N N 619 VAL CG1 HG13 sing N N 620 VAL CG2 HG21 sing N N 621 VAL CG2 HG22 sing N N 622 VAL CG2 HG23 sing N N 623 VAL OXT HXT sing N N 624 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature _ndb_struct_conf_na.feature_count 4YMN 'double helix' ? 4YMN 'b-form double helix' ? # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 D DG 5 1_555 -0.037 -0.234 0.262 -1.433 -13.673 3.323 1 T_DC1:DG5_D T 1 ? D 5 ? 19 1 1 B DC 2 1_555 D DG 4 1_555 0.051 -0.555 0.145 -2.288 -1.815 -1.034 2 T_DC2:DG4_D T 2 ? D 4 ? 19 1 1 B DG 3 1_555 D DC 3 1_555 -0.263 -0.080 0.174 2.392 -6.902 -0.997 3 T_DG3:DC3_D T 3 ? D 3 ? 19 1 1 B DA 4 1_555 D DT 2 1_555 -0.151 -0.046 0.557 4.754 -4.447 -1.063 4 T_DA4:DT2_D T 4 ? D 2 ? 20 1 1 B DC 5 1_555 D DG 1 1_555 0.350 -0.025 -0.047 10.141 -0.951 4.381 5 T_DC5:DG1_D T 5 ? D 1 ? 19 1 1 B DT 7 1_555 C DA 10 1_555 -0.758 -0.091 -0.109 -12.747 -3.911 2.244 6 T_DT7:DA10_P T 7 ? P 10 ? 20 1 1 B DC 8 1_555 C DG 9 1_555 0.083 -0.092 -0.534 10.367 -12.501 2.199 7 T_DC8:DG9_P T 8 ? P 9 ? 19 1 1 B DG 9 1_555 C DC 8 1_555 -0.291 0.010 0.138 1.085 -7.306 3.899 8 T_DG9:DC8_P T 9 ? P 8 ? 19 1 1 B DC 10 1_555 C DG 7 1_555 0.449 -0.044 0.294 4.709 -12.389 -1.769 9 T_DC10:DG7_P T 10 ? P 7 ? 19 1 1 B DA 11 1_555 C DT 6 1_555 -0.037 0.110 0.405 5.713 -14.586 1.228 10 T_DA11:DT6_P T 11 ? P 6 ? 20 1 1 B DT 12 1_555 C DA 5 1_555 -0.134 0.054 0.161 10.572 -13.959 3.213 11 T_DT12:DA5_P T 12 ? P 5 ? 20 1 1 B DC 13 1_555 C DG 4 1_555 0.391 -0.266 0.157 2.416 -17.314 2.531 12 T_DC13:DG4_P T 13 ? P 4 ? 19 1 1 B DA 14 1_555 C DT 3 1_555 0.222 -0.072 0.332 -2.072 -8.818 -1.854 13 T_DA14:DT3_P T 14 ? P 3 ? 20 1 1 B DG 15 1_555 C DC 2 1_555 0.022 -0.176 -0.018 5.121 -5.498 2.065 14 T_DG15:DC2_P T 15 ? P 2 ? 19 1 1 B DC 16 1_555 C DG 1 1_555 -0.021 -0.219 0.075 13.069 -14.337 0.961 15 T_DC16:DG1_P T 16 ? P 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 D DG 5 1_555 B DC 2 1_555 D DG 4 1_555 1.078 0.659 3.382 2.907 1.970 39.657 0.729 -1.230 3.477 2.897 -4.274 39.806 1 TT_DC1DC2:DG4DG5_DD T 1 ? D 5 ? T 2 ? D 4 ? 1 B DC 2 1_555 D DG 4 1_555 B DG 3 1_555 D DC 3 1_555 -0.648 0.439 3.226 -2.724 2.489 33.080 0.351 0.678 3.291 4.354 4.765 33.279 2 TT_DC2DG3:DC3DG4_DD T 2 ? D 4 ? T 3 ? D 3 ? 1 B DG 3 1_555 D DC 3 1_555 B DA 4 1_555 D DT 2 1_555 -0.531 -0.285 3.117 -4.092 2.140 36.290 -0.737 0.305 3.135 3.419 6.537 36.573 3 TT_DG3DA4:DT2DC3_DD T 3 ? D 3 ? T 4 ? D 2 ? 1 B DA 4 1_555 D DT 2 1_555 B DC 5 1_555 D DG 1 1_555 0.920 -0.512 3.263 3.327 1.202 30.134 -1.223 -1.082 3.321 2.301 -6.371 30.336 4 TT_DA4DC5:DG1DT2_DD T 4 ? D 2 ? T 5 ? D 1 ? 1 B DT 7 1_555 C DA 10 1_555 B DC 8 1_555 C DG 9 1_555 0.147 0.508 2.759 5.054 8.203 32.607 -0.269 0.450 2.792 14.227 -8.765 33.964 5 TT_DT7DC8:DG9DA10_PP T 7 ? P 10 ? T 8 ? P 9 ? 1 B DC 8 1_555 C DG 9 1_555 B DG 9 1_555 C DC 8 1_555 -0.564 0.849 3.570 -8.380 16.482 34.922 -1.034 -0.330 3.640 25.386 12.908 39.380 6 TT_DC8DG9:DC8DG9_PP T 8 ? P 9 ? T 9 ? P 8 ? 1 B DG 9 1_555 C DC 8 1_555 B DC 10 1_555 C DG 7 1_555 -0.633 -0.460 3.195 -1.917 3.982 32.228 -1.499 0.804 3.149 7.132 3.434 32.522 7 TT_DG9DC10:DG7DC8_PP T 9 ? P 8 ? T 10 ? P 7 ? 1 B DC 10 1_555 C DG 7 1_555 B DA 11 1_555 C DT 6 1_555 -0.046 -0.198 3.193 0.344 2.422 37.006 -0.627 0.117 3.174 3.810 -0.541 37.084 8 TT_DC10DA11:DT6DG7_PP T 10 ? P 7 ? T 11 ? P 6 ? 1 B DA 11 1_555 C DT 6 1_555 B DT 12 1_555 C DA 5 1_555 0.494 -0.661 3.136 1.670 -2.122 30.809 -0.842 -0.613 3.195 -3.985 -3.135 30.924 9 TT_DA11DT12:DA5DT6_PP T 11 ? P 6 ? T 12 ? P 5 ? 1 B DT 12 1_555 C DA 5 1_555 B DC 13 1_555 C DG 4 1_555 0.103 -0.162 3.322 2.805 -2.240 43.935 -0.002 0.131 3.326 -2.988 -3.742 44.074 10 TT_DT12DC13:DG4DA5_PP T 12 ? P 5 ? T 13 ? P 4 ? 1 B DC 13 1_555 C DG 4 1_555 B DA 14 1_555 C DT 3 1_555 -0.344 -0.188 3.266 -1.028 5.177 34.293 -1.106 0.419 3.213 8.716 1.731 34.685 11 TT_DC13DA14:DT3DG4_PP T 13 ? P 4 ? T 14 ? P 3 ? 1 B DA 14 1_555 C DT 3 1_555 B DG 15 1_555 C DC 2 1_555 0.734 -0.516 3.234 0.835 3.442 29.934 -1.682 -1.245 3.175 6.635 -1.609 30.138 12 TT_DA14DG15:DC2DT3_PP T 14 ? P 3 ? T 15 ? P 2 ? 1 B DG 15 1_555 C DC 2 1_555 B DC 16 1_555 C DG 1 1_555 -0.471 -0.661 2.949 -3.817 7.706 33.232 -2.196 0.267 2.767 13.201 6.539 34.296 13 TT_DG15DC16:DG1DC2_PP T 15 ? P 2 ? T 16 ? P 1 ? # _atom_sites.entry_id 4YMN _atom_sites.fract_transf_matrix[1][1] 0.018213 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005890 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012655 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019102 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F MG N NA O P S # loop_