HEADER DNA BINDING PROTEIN 09-MAR-15 4YN8 TITLE CRYSTAL STRUCTURE OF RESPONSE REGULATOR CHRA IN HEME-SENSING TWO TITLE 2 COMPONENT SYSTEM COMPND MOL_ID: 1; COMPND 2 MOLECULE: RESPONSE REGULATOR CHRA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM DIPHTHERIAE; SOURCE 3 ORGANISM_TAXID: 1717; SOURCE 4 GENE: CHRA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX6P-1 KEYWDS DNA-BINDING, HELIX-TURN-HELIX, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.DOI,H.NAKAMURA,Y.SHIRO,H.SUGIMOTO REVDAT 3 08-NOV-23 4YN8 1 LINK REVDAT 2 05-FEB-20 4YN8 1 REMARK REVDAT 1 19-AUG-15 4YN8 0 JRNL AUTH A.DOI,H.NAKAMURA,Y.SHIRO,H.SUGIMOTO JRNL TITL STRUCTURE OF THE RESPONSE REGULATOR CHRA IN THE HAEM-SENSING JRNL TITL 2 TWO-COMPONENT SYSTEM OF CORYNEBACTERIUM DIPHTHERIAE. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 71 966 2015 JRNL REFN ESSN 2053-230X JRNL PMID 26249683 JRNL DOI 10.1107/S2053230X15009838 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Y.ITO,S.NAKAGAWA,A.KOMAGATA,M.IKEDA-SAITO,Y.SHIRO,H.NAKAMURA REMARK 1 TITL HEME-DEPENDENT AUTOPHOSPHORYLATION OF A HEME SENSOR KINASE, REMARK 1 TITL 2 CHRS, FROM CORYNEBACTERIUM DIPHTHERIAE RECONSTITUTED IN REMARK 1 TITL 3 PROTEOLIPOSOMES. REMARK 1 REF FEBS LETT. V. 583 2244 2009 REMARK 1 REFN ISSN 0014-5793 REMARK 1 PMID 19505463 REMARK 1 DOI 10.1016/J.FEBSLET.2009.06.001 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.28 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 27233 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1449 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1507 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 197 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : -0.07000 REMARK 3 B33 (A**2) : 0.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.097 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.056 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.736 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4YN8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000207744. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28694 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 14.10 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : 0.09600 REMARK 200 FOR THE DATA SET : 30.0350 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.30 REMARK 200 R MERGE FOR SHELL (I) : 0.41800 REMARK 200 R SYM FOR SHELL (I) : 0.41800 REMARK 200 FOR SHELL : 7.843 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: 3EUL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M MAGNESIUM SULFATE, 0.1 M MES, PH REMARK 280 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.44000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 42.44000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.65000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 42.44000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 42.32500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 42.44000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 126.97500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 42.44000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 126.97500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.44000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.32500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 42.44000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 42.44000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 84.65000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 42.44000 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 42.44000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 84.65000 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 42.44000 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 126.97500 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 42.44000 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 42.32500 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 42.44000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 42.32500 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 42.44000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 126.97500 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 42.44000 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 42.44000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 84.65000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 323 O HOH A 379 5554 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 14 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 186 NE - CZ - NH1 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG A 186 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 120 76.24 -104.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD1 REMARK 620 2 ASP A 50 OD1 98.6 REMARK 620 3 ASP A 50 OD2 87.5 15.2 REMARK 620 4 ASP A 50 OD2 104.5 50.7 63.6 REMARK 620 5 HOH A 308 O 77.0 95.6 83.0 146.3 REMARK 620 6 HOH A 387 O 81.3 80.6 89.1 35.9 157.2 REMARK 620 7 HOH A 397 O 179.6 81.4 92.5 75.8 102.6 99.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 207 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 22 O REMARK 620 2 PHE A 24 O 86.9 REMARK 620 3 ILE A 27 O 108.7 82.5 REMARK 620 4 HOH A 419 O 88.9 166.0 86.3 REMARK 620 5 HOH A 429 O 83.8 95.6 167.2 97.2 REMARK 620 6 HOH A 476 O 171.2 93.9 80.1 92.3 87.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 205 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE A 199 OXT REMARK 620 2 HOH A 310 O 86.7 REMARK 620 3 HOH A 312 O 90.1 89.1 REMARK 620 4 HOH A 360 O 94.3 177.5 93.2 REMARK 620 5 HOH A 368 O 171.8 85.9 93.2 92.9 REMARK 620 6 HOH A 401 O 86.0 90.9 176.1 86.9 90.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 206 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 307 O REMARK 620 2 HOH A 313 O 86.0 REMARK 620 3 HOH A 339 O 171.8 88.0 REMARK 620 4 HOH A 346 O 86.6 96.3 88.5 REMARK 620 5 HOH A 381 O 92.8 176.8 93.4 86.6 REMARK 620 6 HOH A 384 O 96.7 91.5 88.9 171.7 85.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 208 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 395 O REMARK 620 2 HOH A 424 O 172.2 REMARK 620 3 HOH A 450 O 91.3 82.1 REMARK 620 4 HOH A 471 O 86.0 101.4 168.5 REMARK 620 5 HOH A 487 O 96.4 89.3 104.9 64.4 REMARK 620 6 HOH A 495 O 85.3 89.0 75.2 115.6 178.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 209 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 447 O REMARK 620 2 HOH A 448 O 101.3 REMARK 620 3 HOH A 488 O 88.6 76.6 REMARK 620 4 HOH A 489 O 99.1 86.1 162.2 REMARK 620 5 HOH A 494 O 125.5 120.8 71.2 115.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 210 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 373 O REMARK 620 2 HOH A 382 O 89.9 REMARK 620 3 HOH A 383 O 83.6 87.9 REMARK 620 4 HOH A 407 O 102.0 87.9 173.1 REMARK 620 5 HOH A 467 O 81.2 168.4 83.7 101.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 210 DBREF 4YN8 A 1 199 UNP Q9RPE9 Q9RPE9_CORDP 1 199 SEQADV 4YN8 GLY A -3 UNP Q9RPE9 EXPRESSION TAG SEQADV 4YN8 PRO A -2 UNP Q9RPE9 EXPRESSION TAG SEQADV 4YN8 LEU A -1 UNP Q9RPE9 EXPRESSION TAG SEQADV 4YN8 GLY A 0 UNP Q9RPE9 EXPRESSION TAG SEQADV 4YN8 SER A 1 UNP Q9RPE9 MET 1 ENGINEERED MUTATION SEQRES 1 A 203 GLY PRO LEU GLY SER ILE ARG VAL MET LEU ILE ASP ASP SEQRES 2 A 203 HIS PRO VAL VAL ARG ALA GLY LEU ARG SER ILE LEU ASP SEQRES 3 A 203 SER PHE ASP ASP ILE THR VAL VAL ALA GLU ALA SER ASP SEQRES 4 A 203 GLY SER ASN ILE ASN THR LYS GLY ILE ASP VAL VAL VAL SEQRES 5 A 203 THR ASP ILE GLN MET PRO GLY THR ASP GLY ILE THR LEU SEQRES 6 A 203 THR ARG ALA LEU ALA ASN ALA GLY GLY PRO PRO VAL LEU SEQRES 7 A 203 ILE LEU THR THR TYR ASP THR GLU ALA ASP ILE LEU ALA SEQRES 8 A 203 ALA VAL GLU ALA GLY ALA MET GLY TYR LEU LEU LYS ASP SEQRES 9 A 203 ALA PRO GLU SER ALA LEU HIS ASP ALA VAL VAL ALA THR SEQRES 10 A 203 PHE GLU GLY ARG ARG THR LEU ALA PRO GLU VAL ALA ASN SEQRES 11 A 203 ALA LEU MET GLN ARG VAL SER LYS PRO ARG GLN ALA LEU SEQRES 12 A 203 SER ALA ARG GLU ILE GLU ILE LEU GLN ASN LEU GLU GLN SEQRES 13 A 203 GLY LEU SER ASN ARG GLN LEU ALA ALA LYS LEU PHE ILE SEQRES 14 A 203 SER GLU ALA THR VAL LYS THR HIS LEU VAL HIS ILE TYR SEQRES 15 A 203 SER LYS LEU GLY VAL ASP ASN ARG THR ALA ALA ILE THR SEQRES 16 A 203 ALA ALA ARG GLN GLN ARG LEU ILE HET SO4 A 200 5 HET SO4 A 201 5 HET SO4 A 202 5 HET SO4 A 203 5 HET MG A 204 1 HET MG A 205 1 HET MG A 206 1 HET MG A 207 1 HET MG A 208 1 HET MG A 209 1 HET MG A 210 1 HETNAM SO4 SULFATE ION HETNAM MG MAGNESIUM ION FORMUL 2 SO4 4(O4 S 2-) FORMUL 6 MG 7(MG 2+) FORMUL 13 HOH *197(H2 O) HELIX 1 AA1 HIS A 10 SER A 23 1 14 HELIX 2 AA2 ASP A 57 GLY A 69 1 13 HELIX 3 AA3 ASP A 84 ALA A 91 1 8 HELIX 4 AA4 PRO A 102 GLY A 116 1 15 HELIX 5 AA5 ALA A 121 SER A 133 1 13 HELIX 6 AA6 SER A 140 GLN A 152 1 13 HELIX 7 AA7 SER A 155 PHE A 164 1 10 HELIX 8 AA8 SER A 166 GLY A 182 1 17 HELIX 9 AA9 ASN A 185 GLN A 196 1 12 SHEET 1 AA1 6 ILE A 27 ALA A 33 0 SHEET 2 AA1 6 ILE A 2 ILE A 7 1 N VAL A 4 O THR A 28 SHEET 3 AA1 6 VAL A 46 THR A 49 1 O VAL A 48 N MET A 5 SHEET 4 AA1 6 VAL A 73 THR A 77 1 O LEU A 74 N VAL A 47 SHEET 5 AA1 6 GLY A 95 LEU A 98 1 O GLY A 95 N ILE A 75 SHEET 6 AA1 6 THR A 119 LEU A 120 1 O THR A 119 N TYR A 96 LINK OD1 ASP A 8 MG MG A 204 1555 1555 2.13 LINK O ASP A 22 MG MG A 207 1555 1555 2.54 LINK O PHE A 24 MG MG A 207 1555 1555 2.45 LINK O ILE A 27 MG MG A 207 1555 1555 2.32 LINK OD1BASP A 50 MG MG A 204 1555 1555 2.29 LINK OD2AASP A 50 MG MG A 204 1555 1555 2.13 LINK OD2BASP A 50 MG MG A 204 1555 1555 2.80 LINK OXT ILE A 199 MG MG A 205 1555 1555 2.07 LINK MG MG A 204 O HOH A 308 1555 1555 2.06 LINK MG MG A 204 O AHOH A 387 1555 1555 2.20 LINK MG MG A 204 O HOH A 397 1555 1555 2.00 LINK MG MG A 205 O HOH A 310 1555 1555 2.17 LINK MG MG A 205 O HOH A 312 1555 1555 2.06 LINK MG MG A 205 O HOH A 360 1555 1555 2.02 LINK MG MG A 205 O HOH A 368 1555 8565 2.11 LINK MG MG A 205 O HOH A 401 1555 1555 2.12 LINK MG MG A 206 O HOH A 307 1555 1555 2.11 LINK MG MG A 206 O HOH A 313 1555 1555 2.10 LINK MG MG A 206 O HOH A 339 1555 8665 2.00 LINK MG MG A 206 O HOH A 346 1555 8665 2.06 LINK MG MG A 206 O HOH A 381 1555 8665 2.18 LINK MG MG A 206 O HOH A 384 1555 1555 2.22 LINK MG MG A 207 O HOH A 419 1555 1555 2.64 LINK MG MG A 207 O HOH A 429 1555 1555 2.26 LINK MG MG A 207 O HOH A 476 1555 1555 2.47 LINK MG MG A 208 O HOH A 395 1555 1555 2.16 LINK MG MG A 208 O HOH A 424 1555 1555 2.25 LINK MG MG A 208 O HOH A 450 1555 1555 2.01 LINK MG MG A 208 O HOH A 471 1555 1555 2.30 LINK MG MG A 208 O HOH A 487 1555 1555 2.18 LINK MG MG A 208 O HOH A 495 1555 1555 2.15 LINK MG MG A 209 O HOH A 447 1555 1555 2.11 LINK MG MG A 209 O HOH A 448 1555 1555 2.17 LINK MG MG A 209 O HOH A 488 1555 1555 2.20 LINK MG MG A 209 O HOH A 489 1555 1555 2.15 LINK MG MG A 209 O HOH A 494 1555 1555 2.33 LINK MG MG A 210 O HOH A 373 1555 1555 2.14 LINK MG MG A 210 O HOH A 382 1555 8665 2.16 LINK MG MG A 210 O HOH A 383 1555 8665 2.24 LINK MG MG A 210 O HOH A 407 1555 1555 1.99 LINK MG MG A 210 O HOH A 467 1555 1555 2.14 SITE 1 AC1 10 ASP A 50 ILE A 51 GLN A 52 LEU A 76 SITE 2 AC1 10 THR A 77 THR A 81 ALA A 83 LYS A 99 SITE 3 AC1 10 HOH A 302 HOH A 397 SITE 1 AC2 3 ARG A 14 SER A 34 HOH A 423 SITE 1 AC3 4 LYS A 171 TYR A 178 ASN A 185 ARG A 186 SITE 1 AC4 9 PRO A 102 GLU A 103 SER A 104 HOH A 303 SITE 2 AC4 9 HOH A 316 HOH A 329 HOH A 339 HOH A 346 SITE 3 AC4 9 HOH A 489 SITE 1 AC5 7 ASP A 8 ASP A 9 HIS A 10 ASP A 50 SITE 2 AC5 7 HOH A 308 HOH A 387 HOH A 397 SITE 1 AC6 6 ILE A 199 HOH A 310 HOH A 312 HOH A 360 SITE 2 AC6 6 HOH A 368 HOH A 401 SITE 1 AC7 6 HOH A 307 HOH A 313 HOH A 339 HOH A 346 SITE 2 AC7 6 HOH A 381 HOH A 384 SITE 1 AC8 6 ASP A 22 PHE A 24 ILE A 27 HOH A 419 SITE 2 AC8 6 HOH A 429 HOH A 476 SITE 1 AC9 6 HOH A 395 HOH A 424 HOH A 450 HOH A 471 SITE 2 AC9 6 HOH A 487 HOH A 495 SITE 1 AD1 5 HOH A 447 HOH A 448 HOH A 488 HOH A 489 SITE 2 AD1 5 HOH A 494 SITE 1 AD2 5 HOH A 373 HOH A 382 HOH A 383 HOH A 407 SITE 2 AD2 5 HOH A 467 CRYST1 84.880 84.880 169.300 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011781 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011781 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005907 0.00000