HEADER SUGAR BINDING PROTEIN 20-MAR-15 4YWA TITLE STRUCTURAL INSIGHT INTO DIVALENT GALACTOSIDE BINDING TO PSEUDOMONAS TITLE 2 AERUGINOSA LECTIN LECA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PA-I GALACTOPHILIC LECTIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: PA-IL,GALACTOSE-BINDING LECTIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: LECA, PA1L, PA2570; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GALACTOSIDES, LECTINS, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.VISINI,X.JIN,G.MICHAUD,M.BERGMANN,E.GILLON,A.IMBERTY,A.STOCKER, AUTHOR 2 T.DARBRE,R.PIETERS,J.-L.REYMOND REVDAT 3 10-JAN-24 4YWA 1 LINK REVDAT 2 02-DEC-15 4YWA 1 JRNL REVDAT 1 09-SEP-15 4YWA 0 JRNL AUTH R.VISINI,X.JIN,M.BERGMANN,G.MICHAUD,F.PERTICI,O.FU,A.PUKIN, JRNL AUTH 2 T.R.BRANSON,D.M.THIES-WEESIE,J.KEMMINK,E.GILLON,A.IMBERTY, JRNL AUTH 3 A.STOCKER,T.DARBRE,R.J.PIETERS,J.L.REYMOND JRNL TITL STRUCTURAL INSIGHT INTO MULTIVALENT GALACTOSIDE BINDING TO JRNL TITL 2 PSEUDOMONAS AERUGINOSA LECTIN LECA. JRNL REF ACS CHEM.BIOL. V. 10 2455 2015 JRNL REFN ESSN 1554-8937 JRNL PMID 26295304 JRNL DOI 10.1021/ACSCHEMBIO.5B00302 REMARK 2 REMARK 2 RESOLUTION. 1.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 3 NUMBER OF REFLECTIONS : 228983 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 11482 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.7403 - 3.6993 0.99 7628 436 0.1620 0.1923 REMARK 3 2 3.6993 - 2.9380 0.99 7594 395 0.1550 0.1625 REMARK 3 3 2.9380 - 2.5671 0.98 7612 378 0.1716 0.1834 REMARK 3 4 2.5671 - 2.3326 0.97 7546 404 0.1603 0.1812 REMARK 3 5 2.3326 - 2.1656 0.97 7475 393 0.1632 0.1777 REMARK 3 6 2.1656 - 2.0380 0.97 7469 385 0.1611 0.1773 REMARK 3 7 2.0380 - 1.9359 0.96 7435 375 0.1645 0.1800 REMARK 3 8 1.9359 - 1.8517 0.96 7400 405 0.1853 0.1899 REMARK 3 9 1.8517 - 1.7804 0.96 7425 374 0.1651 0.1774 REMARK 3 10 1.7804 - 1.7190 0.95 7367 384 0.1726 0.2182 REMARK 3 11 1.7190 - 1.6653 0.95 7393 382 0.1726 0.1885 REMARK 3 12 1.6653 - 1.6177 0.95 7350 394 0.1835 0.2165 REMARK 3 13 1.6177 - 1.5751 0.95 7233 377 0.1918 0.2188 REMARK 3 14 1.5751 - 1.5367 0.94 7349 392 0.1968 0.2190 REMARK 3 15 1.5367 - 1.5018 0.94 7259 371 0.2184 0.2353 REMARK 3 16 1.5018 - 1.4698 0.94 7253 396 0.2112 0.2309 REMARK 3 17 1.4698 - 1.4404 0.93 7208 400 0.2210 0.2420 REMARK 3 18 1.4404 - 1.4132 0.93 7136 400 0.2250 0.2371 REMARK 3 19 1.4132 - 1.3880 0.93 7292 351 0.2264 0.2550 REMARK 3 20 1.3880 - 1.3645 0.92 7106 379 0.2674 0.2761 REMARK 3 21 1.3645 - 1.3425 0.93 7178 408 0.2600 0.2622 REMARK 3 22 1.3425 - 1.3218 0.92 7136 359 0.2608 0.2807 REMARK 3 23 1.3218 - 1.3024 0.92 7139 388 0.2840 0.2789 REMARK 3 24 1.3024 - 1.2840 0.91 6972 382 0.3097 0.3164 REMARK 3 25 1.2840 - 1.2667 0.91 7103 350 0.3003 0.3053 REMARK 3 26 1.2667 - 1.2502 0.91 7019 354 0.3460 0.3622 REMARK 3 27 1.2502 - 1.2346 0.91 7010 358 0.3157 0.3294 REMARK 3 28 1.2346 - 1.2197 0.90 7028 363 0.3590 0.3754 REMARK 3 29 1.2197 - 1.2055 0.87 6701 383 0.3477 0.3412 REMARK 3 30 1.2055 - 1.1920 0.86 6685 366 0.3609 0.3658 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3860 REMARK 3 ANGLE : 1.389 5298 REMARK 3 CHIRALITY : 0.089 594 REMARK 3 PLANARITY : 0.008 680 REMARK 3 DIHEDRAL : 11.999 1280 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YWA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000208192. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00003 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 229498 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.190 REMARK 200 RESOLUTION RANGE LOW (A) : 66.968 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06400 REMARK 200 FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.99500 REMARK 200 R SYM FOR SHELL (I) : 0.99500 REMARK 200 FOR SHELL : 0.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1OKO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M AMMONIUM SULFATE, PH 4.6, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 20.39835 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -35.99351 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 66.96810 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -20.39835 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 35.99351 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -66.96810 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 1017 O HOH B 1130 2.02 REMARK 500 O HOH C 323 O HOH C 343 2.05 REMARK 500 O HOH C 485 O HOH D 1117 2.07 REMARK 500 OG SER B 113 O HOH B 1001 2.07 REMARK 500 O HOH B 1108 O HOH B 1121 2.08 REMARK 500 O HOH C 429 O HOH C 434 2.10 REMARK 500 O HOH A 325 O HOH A 356 2.10 REMARK 500 O HOH D 1077 O HOH D 1088 2.10 REMARK 500 O HOH B 1159 O HOH B 1166 2.11 REMARK 500 O HOH D 1116 O HOH D 1159 2.12 REMARK 500 O HOH C 397 O HOH C 476 2.12 REMARK 500 OG SER A 113 O HOH A 301 2.12 REMARK 500 O HOH C 397 O HOH C 429 2.12 REMARK 500 O HOH D 1013 O HOH D 1133 2.13 REMARK 500 O HOH A 482 O HOH A 493 2.13 REMARK 500 O HOH A 420 O HOH A 432 2.14 REMARK 500 O HOH D 1152 O HOH D 1163 2.14 REMARK 500 O HOH A 424 O HOH A 480 2.17 REMARK 500 O HOH B 1123 O HOH B 1170 2.17 REMARK 500 O HOH D 1106 O HOH D 1107 2.17 REMARK 500 O HOH C 305 O HOH C 441 2.18 REMARK 500 O HOH B 1136 O HOH B 1151 2.18 REMARK 500 O HOH D 1128 O HOH D 1140 2.18 REMARK 500 O HOH C 347 O HOH C 398 2.18 REMARK 500 O HOH A 427 O HOH A 433 2.18 REMARK 500 O HOH D 1130 O HOH D 1155 2.18 REMARK 500 O HOH A 357 O HOH A 467 2.19 REMARK 500 O HOH A 362 O HOH A 459 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 1130 O HOH C 423 1645 2.08 REMARK 500 O HOH A 423 O HOH D 1133 1655 2.13 REMARK 500 O HOH B 1128 O HOH C 434 1645 2.13 REMARK 500 O HOH A 432 O HOH D 1124 1655 2.13 REMARK 500 O HOH A 425 O HOH D 1116 1655 2.15 REMARK 500 O HOH A 457 O HOH C 381 1656 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 78 -134.61 56.65 REMARK 500 ASN B 78 -132.96 56.54 REMARK 500 ASN C 78 -132.22 54.41 REMARK 500 ASN D 78 -135.54 56.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 496 DISTANCE = 6.69 ANGSTROMS REMARK 525 HOH D1175 DISTANCE = 6.50 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 36 O REMARK 620 2 ASP A 100 OD2 105.0 REMARK 620 3 THR A 104 O 160.9 90.0 REMARK 620 4 ASN A 107 OD1 82.4 150.8 78.8 REMARK 620 5 ASN A 108 OD1 78.4 75.8 94.2 78.2 REMARK 620 6 4J9 A 202 OB0 92.4 131.5 86.2 75.1 152.7 REMARK 620 7 4J9 A 202 OB1 79.3 74.7 116.8 134.4 136.6 64.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 900 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 4J9 A 202 O25 REMARK 620 2 4J9 A 202 O26 65.0 REMARK 620 3 TYR B 36 O 79.6 91.6 REMARK 620 4 ASP B 100 OD2 73.9 131.8 105.0 REMARK 620 5 THR B 104 O 115.1 86.5 162.4 89.1 REMARK 620 6 ASN B 107 OD1 134.7 73.9 83.5 151.4 79.1 REMARK 620 7 ASN B 108 OD1 137.7 151.1 79.0 77.1 94.3 77.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR C 36 O REMARK 620 2 ASP C 100 OD2 104.8 REMARK 620 3 THR C 104 O 161.6 89.3 REMARK 620 4 ASN C 107 OD1 83.5 150.8 78.5 REMARK 620 5 ASN C 108 OD1 78.6 76.3 93.6 78.2 REMARK 620 6 4J9 C 201 OB0 91.3 132.8 87.6 73.6 150.9 REMARK 620 7 4J9 C 201 OB1 79.7 74.3 116.2 134.8 137.2 65.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 900 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 4J9 C 201 O25 REMARK 620 2 4J9 C 201 O26 64.5 REMARK 620 3 TYR D 36 O 79.7 90.4 REMARK 620 4 ASP D 100 OD2 74.2 132.3 105.0 REMARK 620 5 THR D 104 O 115.3 87.6 162.0 89.5 REMARK 620 6 ASN D 107 OD1 134.3 73.7 83.2 151.5 79.1 REMARK 620 7 ASN D 108 OD1 137.9 150.7 78.9 77.0 94.3 78.0 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4J9 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4J9 C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA D 900 DBREF 4YWA A 1 121 UNP Q05097 PA1L_PSEAE 2 122 DBREF 4YWA B 1 121 UNP Q05097 PA1L_PSEAE 2 122 DBREF 4YWA C 1 121 UNP Q05097 PA1L_PSEAE 2 122 DBREF 4YWA D 1 121 UNP Q05097 PA1L_PSEAE 2 122 SEQRES 1 A 121 ALA TRP LYS GLY GLU VAL LEU ALA ASN ASN GLU ALA GLY SEQRES 2 A 121 GLN VAL THR SER ILE ILE TYR ASN PRO GLY ASP VAL ILE SEQRES 3 A 121 THR ILE VAL ALA ALA GLY TRP ALA SER TYR GLY PRO THR SEQRES 4 A 121 GLN LYS TRP GLY PRO GLN GLY ASP ARG GLU HIS PRO ASP SEQRES 5 A 121 GLN GLY LEU ILE CYS HIS ASP ALA PHE CYS GLY ALA LEU SEQRES 6 A 121 VAL MET LYS ILE GLY ASN SER GLY THR ILE PRO VAL ASN SEQRES 7 A 121 THR GLY LEU PHE ARG TRP VAL ALA PRO ASN ASN VAL GLN SEQRES 8 A 121 GLY ALA ILE THR LEU ILE TYR ASN ASP VAL PRO GLY THR SEQRES 9 A 121 TYR GLY ASN ASN SER GLY SER PHE SER VAL ASN ILE GLY SEQRES 10 A 121 LYS ASP GLN SER SEQRES 1 B 121 ALA TRP LYS GLY GLU VAL LEU ALA ASN ASN GLU ALA GLY SEQRES 2 B 121 GLN VAL THR SER ILE ILE TYR ASN PRO GLY ASP VAL ILE SEQRES 3 B 121 THR ILE VAL ALA ALA GLY TRP ALA SER TYR GLY PRO THR SEQRES 4 B 121 GLN LYS TRP GLY PRO GLN GLY ASP ARG GLU HIS PRO ASP SEQRES 5 B 121 GLN GLY LEU ILE CYS HIS ASP ALA PHE CYS GLY ALA LEU SEQRES 6 B 121 VAL MET LYS ILE GLY ASN SER GLY THR ILE PRO VAL ASN SEQRES 7 B 121 THR GLY LEU PHE ARG TRP VAL ALA PRO ASN ASN VAL GLN SEQRES 8 B 121 GLY ALA ILE THR LEU ILE TYR ASN ASP VAL PRO GLY THR SEQRES 9 B 121 TYR GLY ASN ASN SER GLY SER PHE SER VAL ASN ILE GLY SEQRES 10 B 121 LYS ASP GLN SER SEQRES 1 C 121 ALA TRP LYS GLY GLU VAL LEU ALA ASN ASN GLU ALA GLY SEQRES 2 C 121 GLN VAL THR SER ILE ILE TYR ASN PRO GLY ASP VAL ILE SEQRES 3 C 121 THR ILE VAL ALA ALA GLY TRP ALA SER TYR GLY PRO THR SEQRES 4 C 121 GLN LYS TRP GLY PRO GLN GLY ASP ARG GLU HIS PRO ASP SEQRES 5 C 121 GLN GLY LEU ILE CYS HIS ASP ALA PHE CYS GLY ALA LEU SEQRES 6 C 121 VAL MET LYS ILE GLY ASN SER GLY THR ILE PRO VAL ASN SEQRES 7 C 121 THR GLY LEU PHE ARG TRP VAL ALA PRO ASN ASN VAL GLN SEQRES 8 C 121 GLY ALA ILE THR LEU ILE TYR ASN ASP VAL PRO GLY THR SEQRES 9 C 121 TYR GLY ASN ASN SER GLY SER PHE SER VAL ASN ILE GLY SEQRES 10 C 121 LYS ASP GLN SER SEQRES 1 D 121 ALA TRP LYS GLY GLU VAL LEU ALA ASN ASN GLU ALA GLY SEQRES 2 D 121 GLN VAL THR SER ILE ILE TYR ASN PRO GLY ASP VAL ILE SEQRES 3 D 121 THR ILE VAL ALA ALA GLY TRP ALA SER TYR GLY PRO THR SEQRES 4 D 121 GLN LYS TRP GLY PRO GLN GLY ASP ARG GLU HIS PRO ASP SEQRES 5 D 121 GLN GLY LEU ILE CYS HIS ASP ALA PHE CYS GLY ALA LEU SEQRES 6 D 121 VAL MET LYS ILE GLY ASN SER GLY THR ILE PRO VAL ASN SEQRES 7 D 121 THR GLY LEU PHE ARG TRP VAL ALA PRO ASN ASN VAL GLN SEQRES 8 D 121 GLY ALA ILE THR LEU ILE TYR ASN ASP VAL PRO GLY THR SEQRES 9 D 121 TYR GLY ASN ASN SER GLY SER PHE SER VAL ASN ILE GLY SEQRES 10 D 121 LYS ASP GLN SER HET CA A 201 1 HET 4J9 A 202 136 HET CA B 900 1 HET 4J9 C 201 136 HET CA C 202 1 HET CA D 900 1 HETNAM CA CALCIUM ION HETNAM 4J9 (2R,3R,4S,5R,6R,2'R,3'R,4'S,5'R,6'R)-2,2'-([(2R,3R,4S, HETNAM 2 4J9 5S,6S)-3,4-DIHYDROXY-6-(HYDROXYMETHYL)TETRAHYDRO-2H- HETNAM 3 4J9 PYRAN-2,5-DIYL]BIS{1H-1,2,3-TRIAZOLE-1,4-DIYL[(2S,3R, HETNAM 4 4J9 4S,5S,6S)-3,4-DIHYDROXY-6-(HYDROXYMETHYL)TETRAHYDRO- HETNAM 5 4J9 2H-PYRAN-2,5-DIYL]-1H-1,2,3-TRIAZOLE-1,4- HETNAM 6 4J9 DIYLMETHANEDIYLOXY})BIS[6-(HYDROXYMETHYL)TETRAHYDRO- HETNAM 7 4J9 2H-PYRAN-3,4,5-TRIOL] FORMUL 5 CA 4(CA 2+) FORMUL 6 4J9 2(C40 H60 N12 O24) FORMUL 11 HOH *744(H2 O) HELIX 1 AA1 THR A 104 ASN A 108 5 5 HELIX 2 AA2 THR B 104 ASN B 108 5 5 HELIX 3 AA3 THR C 104 ASN C 108 5 5 HELIX 4 AA4 THR D 104 ASN D 108 5 5 SHEET 1 AA1 4 TRP A 2 LEU A 7 0 SHEET 2 AA1 4 SER A 109 LYS A 118 -1 O VAL A 114 N GLY A 4 SHEET 3 AA1 4 ILE A 26 SER A 35 -1 N SER A 35 O SER A 109 SHEET 4 AA1 4 GLY A 80 TRP A 84 -1 O TRP A 84 N ILE A 26 SHEET 1 AA2 4 GLN A 14 TYR A 20 0 SHEET 2 AA2 4 GLY A 92 TYR A 98 -1 O LEU A 96 N GLN A 14 SHEET 3 AA2 4 LEU A 65 ILE A 69 -1 N VAL A 66 O ILE A 97 SHEET 4 AA2 4 ILE A 75 PRO A 76 -1 O ILE A 75 N MET A 67 SHEET 1 AA3 4 TRP B 2 LEU B 7 0 SHEET 2 AA3 4 SER B 109 LYS B 118 -1 O VAL B 114 N GLY B 4 SHEET 3 AA3 4 ILE B 26 SER B 35 -1 N SER B 35 O SER B 109 SHEET 4 AA3 4 GLY B 80 TRP B 84 -1 O TRP B 84 N ILE B 26 SHEET 1 AA4 4 GLN B 14 TYR B 20 0 SHEET 2 AA4 4 GLY B 92 TYR B 98 -1 O LEU B 96 N GLN B 14 SHEET 3 AA4 4 LEU B 65 ILE B 69 -1 N VAL B 66 O ILE B 97 SHEET 4 AA4 4 ILE B 75 PRO B 76 -1 O ILE B 75 N MET B 67 SHEET 1 AA5 4 TRP C 2 LEU C 7 0 SHEET 2 AA5 4 SER C 109 LYS C 118 -1 O VAL C 114 N GLY C 4 SHEET 3 AA5 4 ILE C 26 SER C 35 -1 N SER C 35 O SER C 109 SHEET 4 AA5 4 GLY C 80 TRP C 84 -1 O TRP C 84 N ILE C 26 SHEET 1 AA6 4 GLN C 14 TYR C 20 0 SHEET 2 AA6 4 GLY C 92 TYR C 98 -1 O LEU C 96 N GLN C 14 SHEET 3 AA6 4 LEU C 65 ILE C 69 -1 N VAL C 66 O ILE C 97 SHEET 4 AA6 4 ILE C 75 PRO C 76 -1 O ILE C 75 N MET C 67 SHEET 1 AA7 4 TRP D 2 LEU D 7 0 SHEET 2 AA7 4 SER D 109 LYS D 118 -1 O ILE D 116 N TRP D 2 SHEET 3 AA7 4 ILE D 26 SER D 35 -1 N SER D 35 O SER D 109 SHEET 4 AA7 4 GLY D 80 TRP D 84 -1 O TRP D 84 N ILE D 26 SHEET 1 AA8 4 GLN D 14 TYR D 20 0 SHEET 2 AA8 4 GLY D 92 TYR D 98 -1 O LEU D 96 N GLN D 14 SHEET 3 AA8 4 CYS D 62 ILE D 69 -1 N VAL D 66 O ILE D 97 SHEET 4 AA8 4 GLN D 45 ASP D 47 -1 N ASP D 47 O CYS D 62 SHEET 1 AA9 4 GLN D 14 TYR D 20 0 SHEET 2 AA9 4 GLY D 92 TYR D 98 -1 O LEU D 96 N GLN D 14 SHEET 3 AA9 4 CYS D 62 ILE D 69 -1 N VAL D 66 O ILE D 97 SHEET 4 AA9 4 ILE D 75 PRO D 76 -1 O ILE D 75 N MET D 67 LINK O TYR A 36 CA CA A 201 1555 1555 2.37 LINK OD2 ASP A 100 CA CA A 201 1555 1555 2.46 LINK O THR A 104 CA CA A 201 1555 1555 2.31 LINK OD1 ASN A 107 CA CA A 201 1555 1555 2.44 LINK OD1 ASN A 108 CA CA A 201 1555 1555 2.34 LINK CA CA A 201 OB0 4J9 A 202 1555 1555 2.46 LINK CA CA A 201 OB1 4J9 A 202 1555 1555 2.52 LINK O25 4J9 A 202 CA CA B 900 1555 1555 2.51 LINK O26 4J9 A 202 CA CA B 900 1555 1555 2.50 LINK O TYR B 36 CA CA B 900 1555 1555 2.35 LINK OD2 ASP B 100 CA CA B 900 1555 1555 2.48 LINK O THR B 104 CA CA B 900 1555 1555 2.30 LINK OD1 ASN B 107 CA CA B 900 1555 1555 2.43 LINK OD1 ASN B 108 CA CA B 900 1555 1555 2.34 LINK O TYR C 36 CA CA C 202 1555 1555 2.33 LINK OD2 ASP C 100 CA CA C 202 1555 1555 2.47 LINK O THR C 104 CA CA C 202 1555 1555 2.31 LINK OD1 ASN C 107 CA CA C 202 1555 1555 2.44 LINK OD1 ASN C 108 CA CA C 202 1555 1555 2.35 LINK OB0 4J9 C 201 CA CA C 202 1555 1555 2.48 LINK OB1 4J9 C 201 CA CA C 202 1555 1555 2.51 LINK O25 4J9 C 201 CA CA D 900 1555 1555 2.51 LINK O26 4J9 C 201 CA CA D 900 1555 1555 2.45 LINK O TYR D 36 CA CA D 900 1555 1555 2.36 LINK OD2 ASP D 100 CA CA D 900 1555 1555 2.46 LINK O THR D 104 CA CA D 900 1555 1555 2.30 LINK OD1 ASN D 107 CA CA D 900 1555 1555 2.44 LINK OD1 ASN D 108 CA CA D 900 1555 1555 2.33 SITE 1 AC1 6 TYR A 36 ASP A 100 THR A 104 ASN A 107 SITE 2 AC1 6 ASN A 108 4J9 A 202 SITE 1 AC2 32 TYR A 36 GLN A 40 HIS A 50 GLN A 53 SITE 2 AC2 32 ASP A 100 THR A 104 ASN A 107 CA A 201 SITE 3 AC2 32 HOH A 302 HOH A 304 HOH A 308 HOH A 310 SITE 4 AC2 32 HOH A 318 HOH A 319 HOH A 321 HOH A 323 SITE 5 AC2 32 HOH A 330 HOH A 343 HOH A 355 HOH A 364 SITE 6 AC2 32 HOH A 374 HOH A 409 TYR B 36 HIS B 50 SITE 7 AC2 32 GLN B 53 ASP B 100 THR B 104 ASN B 107 SITE 8 AC2 32 CA B 900 HOH B1012 HOH B1039 HOH B1048 SITE 1 AC3 6 4J9 A 202 TYR B 36 ASP B 100 THR B 104 SITE 2 AC3 6 ASN B 107 ASN B 108 SITE 1 AC4 31 TYR C 36 GLN C 40 HIS C 50 GLN C 53 SITE 2 AC4 31 ASP C 100 THR C 104 ASN C 107 CA C 202 SITE 3 AC4 31 HOH C 304 HOH C 312 HOH C 313 HOH C 315 SITE 4 AC4 31 HOH C 320 HOH C 321 HOH C 331 HOH C 350 SITE 5 AC4 31 HOH C 353 HOH C 362 HOH C 368 HOH C 418 SITE 6 AC4 31 TYR D 36 GLU D 49 HIS D 50 GLN D 53 SITE 7 AC4 31 ASP D 100 THR D 104 ASN D 107 CA D 900 SITE 8 AC4 31 HOH D1012 HOH D1031 HOH D1045 SITE 1 AC5 6 TYR C 36 ASP C 100 THR C 104 ASN C 107 SITE 2 AC5 6 ASN C 108 4J9 C 201 SITE 1 AC6 6 4J9 C 201 TYR D 36 ASP D 100 THR D 104 SITE 2 AC6 6 ASN D 107 ASN D 108 CRYST1 40.770 72.320 78.710 117.23 105.00 89.94 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024528 -0.000026 0.007448 0.00000 SCALE2 0.000000 0.013827 0.007432 0.00000 SCALE3 0.000000 0.000000 0.014932 0.00000