HEADER PROTEIN TRANSPORT 22-MAR-15 4YXB TITLE FLIM(SPOA)::FLIN FUSION PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAGELLAR MOTOR SWITCH PROTEIN FLIM,FLAGELLAR MOTOR SWITCH COMPND 3 PROTEIN FLIN; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: UNP RESIDUES 245-334,UNP RESIDUES 5-137,UNP RESIDUES 245- COMPND 6 334,UNP RESIDUES 5-137; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: FLIM::FLIN FRAGMENT; COMPND 10 CHAIN: C; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: FLIM::FLIN FRAGMENT; COMPND 14 CHAIN: D; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: AMBIGUOUS PEPTIDE DENSITY; COMPND 18 CHAIN: E; COMPND 19 ENGINEERED: YES; COMPND 20 OTHER_DETAILS: THIS PEPTIDE FRAGMENT WAS BUILT INTO A REGION OF COMPND 21 ELECTRON DENSITY FOR WHICH THE SEQUENCE COULD NOT BE DEFINITIVELY COMPND 22 DETERMINED. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM (STRAIN LT2 / SGSC1412 / SOURCE 3 ATCC 700720); SOURCE 4 ORGANISM_TAXID: 99287; SOURCE 5 STRAIN: LT2 / SGSC1412 / ATCC 700720; SOURCE 6 GENE: FLIM, CHEC2, FLA AII, FLA QII, STM1976, FLIN, FLAN, MOTD, SOURCE 7 STM1977; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 12 TYPHIMURIUM; SOURCE 13 ORGANISM_TAXID: 90371; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 MOL_ID: 3; SOURCE 17 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 18 TYPHIMURIUM STR. 798, SALMONELLA TYPHIMURIUM (STRAIN LT2 / SGSC1412 SOURCE 19 / ATCC 700720); SOURCE 20 ORGANISM_TAXID: 1008297, 99287; SOURCE 21 STRAIN: LT2 / SGSC1412 / ATCC 700720; SOURCE 22 GENE: FLIN, UMN798_2086, FLIN, FLAN, MOTD, STM1977; SOURCE 23 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 25 MOL_ID: 4; SOURCE 26 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 27 TYPHIMURIUM; SOURCE 28 ORGANISM_TAXID: 90371; SOURCE 29 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 30 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TYPE III SECRETION SYSTEM, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR R.Q.NOTTI,C.E.STEBBINS REVDAT 2 22-NOV-17 4YXB 1 SOURCE REMARK REVDAT 1 03-JUN-15 4YXB 0 JRNL AUTH R.Q.NOTTI,S.BHATTACHARYA,M.LILIC,C.E.STEBBINS JRNL TITL A COMMON ASSEMBLY MODULE IN INJECTISOME AND FLAGELLAR TYPE JRNL TITL 2 III SECRETION SORTING PLATFORMS. JRNL REF NAT COMMUN V. 6 7125 2015 JRNL REFN ESSN 2041-1723 JRNL PMID 25994170 JRNL DOI 10.1038/NCOMMS8125 REMARK 2 REMARK 2 RESOLUTION. 2.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 18372 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1838 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.0864 - 6.0155 0.99 1376 150 0.2147 0.2442 REMARK 3 2 6.0155 - 4.7762 1.00 1300 142 0.2086 0.2322 REMARK 3 3 4.7762 - 4.1729 1.00 1282 146 0.1616 0.1879 REMARK 3 4 4.1729 - 3.7915 1.00 1284 132 0.1928 0.2278 REMARK 3 5 3.7915 - 3.5199 1.00 1271 148 0.2270 0.2812 REMARK 3 6 3.5199 - 3.3124 1.00 1257 149 0.2257 0.2930 REMARK 3 7 3.3124 - 3.1465 1.00 1274 119 0.2347 0.2703 REMARK 3 8 3.1465 - 3.0096 1.00 1237 145 0.2530 0.3386 REMARK 3 9 3.0096 - 2.8938 1.00 1253 146 0.2709 0.3187 REMARK 3 10 2.8938 - 2.7939 1.00 1261 130 0.2875 0.3379 REMARK 3 11 2.7939 - 2.7066 1.00 1248 147 0.2896 0.3817 REMARK 3 12 2.7066 - 2.6292 1.00 1262 136 0.3071 0.3570 REMARK 3 13 2.6292 - 2.5600 1.00 1229 148 0.3116 0.4148 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 66.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2642 REMARK 3 ANGLE : 1.307 3608 REMARK 3 CHIRALITY : 0.045 467 REMARK 3 PLANARITY : 0.005 456 REMARK 3 DIHEDRAL : 14.710 948 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YXB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000208242. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.2.7 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18420 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.560 REMARK 200 RESOLUTION RANGE LOW (A) : 57.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.80 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.30 REMARK 200 R MERGE FOR SHELL (I) : 1.21500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: FLIM(245-334)::FLIN(5-137) WAS REMARK 280 CONCENTRATED TO 7.5MG/ML AND CRYSTALLIZED WITH 2.2M NACL, 100MM REMARK 280 IMIDAZOLE.CL PH=8.0. CRYSTALS WERE CRYOPROTECTED WITH 2M NACL, REMARK 280 100MM IMIDAZOLE.CL PH=8.0, 30% GLYCEROL., VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.57500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.98000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.75000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.98000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.57500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.75000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 1070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 PRO A 2 REMARK 465 VAL A 3 REMARK 465 ASP A 4 REMARK 465 ASN A 5 REMARK 465 TRP A 6 REMARK 465 ARG A 7 REMARK 465 ASP A 8 REMARK 465 ASN A 9 REMARK 465 LEU A 10 REMARK 465 VAL A 11 REMARK 465 ARG A 12 REMARK 465 GLN A 13 REMARK 465 VAL A 14 REMARK 465 GLN A 15 REMARK 465 HIS A 16 REMARK 465 SER A 17 REMARK 465 GLU A 91 REMARK 465 GLN A 92 REMARK 465 PRO A 93 REMARK 465 LYS A 94 REMARK 465 ASN A 95 REMARK 465 ASN A 96 REMARK 465 PRO A 97 REMARK 465 SER A 98 REMARK 465 ASP A 99 REMARK 465 GLU A 100 REMARK 465 ASN A 101 REMARK 465 THR A 102 REMARK 465 GLY A 103 REMARK 465 ALA A 104 REMARK 465 LEU A 105 REMARK 465 ASP A 106 REMARK 465 ASP A 107 REMARK 465 LEU A 108 REMARK 465 TRP A 109 REMARK 465 ALA A 110 REMARK 465 ASP A 111 REMARK 465 ALA A 112 REMARK 465 LEU A 113 REMARK 465 ASN A 114 REMARK 465 GLU A 115 REMARK 465 GLN A 116 REMARK 465 LYS A 117 REMARK 465 ALA A 118 REMARK 465 THR A 119 REMARK 465 THR A 120 REMARK 465 THR A 121 REMARK 465 LYS A 122 REMARK 465 SER A 123 REMARK 465 ALA A 124 REMARK 465 ALA A 125 REMARK 465 ASP A 126 REMARK 465 ALA A 127 REMARK 465 VAL A 128 REMARK 465 PHE A 129 REMARK 465 GLN A 130 REMARK 465 GLN A 131 REMARK 465 LEU A 132 REMARK 465 GLY A 133 REMARK 465 GLY A 134 REMARK 465 GLY A 135 REMARK 465 ASP A 136 REMARK 465 VAL A 137 REMARK 465 SER A 138 REMARK 465 GLY A 139 REMARK 465 GLY B 1 REMARK 465 PRO B 2 REMARK 465 VAL B 3 REMARK 465 GLU B 91 REMARK 465 GLN B 92 REMARK 465 PRO B 93 REMARK 465 LYS B 94 REMARK 465 ASN B 95 REMARK 465 ASN B 96 REMARK 465 PRO B 97 REMARK 465 SER B 98 REMARK 465 ASP B 99 REMARK 465 GLU B 100 REMARK 465 ASN B 101 REMARK 465 THR B 102 REMARK 465 GLY B 103 REMARK 465 ALA B 104 REMARK 465 LEU B 105 REMARK 465 ASP B 106 REMARK 465 ASP B 107 REMARK 465 LEU B 108 REMARK 465 TRP B 109 REMARK 465 ALA B 110 REMARK 465 ASP B 111 REMARK 465 ALA B 112 REMARK 465 LEU B 113 REMARK 465 ASN B 114 REMARK 465 GLU B 115 REMARK 465 GLN B 116 REMARK 465 LYS B 117 REMARK 465 ALA B 118 REMARK 465 THR B 119 REMARK 465 THR B 120 REMARK 465 THR B 121 REMARK 465 LYS B 122 REMARK 465 SER B 123 REMARK 465 ALA B 124 REMARK 465 ALA B 125 REMARK 465 ASP B 126 REMARK 465 ALA B 127 REMARK 465 VAL B 128 REMARK 465 PHE B 129 REMARK 465 GLN B 130 REMARK 465 GLN B 131 REMARK 465 LEU B 132 REMARK 465 GLY B 133 REMARK 465 GLY B 134 REMARK 465 GLY B 135 REMARK 465 ASP B 136 REMARK 465 VAL B 137 REMARK 465 SER B 138 REMARK 465 GLY B 139 REMARK 465 ALA B 140 REMARK 465 MSE B 141 REMARK 465 GLN B 142 REMARK 465 GLU D 112 REMARK 465 LEU D 113 REMARK 465 GLY D 114 REMARK 465 ARG D 115 REMARK 465 THR D 116 REMARK 465 ARG D 117 REMARK 465 MSE D 118 REMARK 465 THR D 119 REMARK 465 ILE D 120 REMARK 465 LYS D 121 REMARK 465 GLU D 122 REMARK 465 LEU D 123 REMARK 465 LEU D 124 REMARK 465 ARG D 125 REMARK 465 LEU D 126 REMARK 465 THR D 127 REMARK 465 GLN D 128 REMARK 465 GLY D 129 REMARK 465 SER D 130 REMARK 465 VAL D 131 REMARK 465 VAL D 132 REMARK 465 ALA D 133 REMARK 465 LEU D 134 REMARK 465 ASP D 135 REMARK 465 GLY D 136 REMARK 465 LEU D 137 REMARK 465 ALA D 138 REMARK 465 GLY D 139 REMARK 465 GLU D 140 REMARK 465 PRO D 141 REMARK 465 LEU D 142 REMARK 465 ASP D 143 REMARK 465 ILE D 144 REMARK 465 LEU D 145 REMARK 465 ILE D 146 REMARK 465 ASN D 147 REMARK 465 GLY D 148 REMARK 465 TYR D 149 REMARK 465 LEU D 150 REMARK 465 ILE D 151 REMARK 465 ALA D 152 REMARK 465 GLN D 153 REMARK 465 GLY D 154 REMARK 465 GLU D 155 REMARK 465 VAL D 156 REMARK 465 VAL D 157 REMARK 465 VAL D 158 REMARK 465 VAL D 159 REMARK 465 ALA D 160 REMARK 465 ASP D 161 REMARK 465 LYS D 162 REMARK 465 TYR D 163 REMARK 465 GLY D 164 REMARK 465 VAL D 165 REMARK 465 ARG D 166 REMARK 465 ILE D 167 REMARK 465 THR D 168 REMARK 465 ASP D 169 REMARK 465 ILE D 170 REMARK 465 ILE D 171 REMARK 465 THR D 172 REMARK 465 PRO D 173 REMARK 465 SER D 174 REMARK 465 GLU D 175 REMARK 465 ARG D 176 REMARK 465 MSE D 177 REMARK 465 ARG D 178 REMARK 465 ARG D 179 REMARK 465 LEU D 180 REMARK 465 SER D 181 REMARK 465 ARG D 182 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 18 CG CD OE1 OE2 REMARK 470 LYS A 37 CG CD CE NZ REMARK 470 LYS A 48 CG CD CE NZ REMARK 470 ASP A 50 CG OD1 OD2 REMARK 470 ASP A 57 CG OD1 OD2 REMARK 470 GLN A 65 CG CD OE1 NE2 REMARK 470 ASN A 70 CG OD1 ND2 REMARK 470 GLU A 90 CG CD OE1 OE2 REMARK 470 ASP A 143 CG OD1 OD2 REMARK 470 ARG A 162 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 166 CG CD CE NZ REMARK 470 GLU A 167 CG CD OE1 OE2 REMARK 470 ASP A 180 CG OD1 OD2 REMARK 470 GLU A 185 CG CD OE1 OE2 REMARK 470 LYS A 207 CG CD CE NZ REMARK 470 GLU A 220 CG CD OE1 OE2 REMARK 470 ASP B 4 CG OD1 OD2 REMARK 470 ASN B 5 CG OD1 ND2 REMARK 470 ARG B 7 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 8 CG OD1 OD2 REMARK 470 ASN B 9 CG OD1 ND2 REMARK 470 ARG B 12 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 15 CG CD OE1 NE2 REMARK 470 HIS B 16 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 37 CG CD CE NZ REMARK 470 GLU B 47 CG CD OE1 OE2 REMARK 470 LYS B 48 CG CD CE NZ REMARK 470 ASP B 50 CG OD1 OD2 REMARK 470 GLU B 90 CG CD OE1 OE2 REMARK 470 ASP B 143 CG OD1 OD2 REMARK 470 GLN B 173 CG CD OE1 NE2 REMARK 470 GLU B 185 CG CD OE1 OE2 REMARK 470 GLU B 200 CG CD OE1 OE2 REMARK 470 ASP B 206 CG OD1 OD2 REMARK 470 LYS B 207 CG CD CE NZ REMARK 470 ARG B 227 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 130 CG CD OE1 NE2 REMARK 470 ASP D 106 CG OD1 OD2 REMARK 470 ASP D 111 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 50 -70.61 -69.32 REMARK 500 VAL A 69 107.06 -160.50 REMARK 500 MSE A 141 117.37 -178.81 REMARK 500 ASP A 180 38.12 -70.34 REMARK 500 ASP A 206 -4.73 60.43 REMARK 500 ASN B 5 57.65 -66.07 REMARK 500 TRP B 6 -65.99 -133.89 REMARK 500 VAL B 77 108.14 -58.02 REMARK 500 ALA B 205 -139.51 56.95 REMARK 500 ALA D 104 46.98 -153.19 REMARK 500 UNK E 303 -71.23 -73.25 REMARK 500 UNK E 304 -150.30 -91.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 UNK E 303 UNK E 304 -144.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMD A 301 DBREF 4YXB A 5 94 UNP P26418 FLIM_SALTY 245 334 DBREF 4YXB A 95 227 UNP P26419 FLIN_SALTY 5 137 DBREF 4YXB B 5 94 UNP P26418 FLIM_SALTY 245 334 DBREF 4YXB B 95 227 UNP P26419 FLIN_SALTY 5 137 DBREF 4YXB C 128 133 PDB 4YXB 4YXB 128 133 DBREF1 4YXB D 103 111 UNP A0A0B4JZM9_SALTM DBREF2 4YXB D A0A0B4JZM9 10 18 DBREF 4YXB D 112 182 UNP P26419 FLIN_SALTY 67 137 DBREF 4YXB E 301 306 PDB 4YXB 4YXB 301 306 SEQADV 4YXB GLY A 1 UNP P26418 EXPRESSION TAG SEQADV 4YXB PRO A 2 UNP P26418 EXPRESSION TAG SEQADV 4YXB VAL A 3 UNP P26418 EXPRESSION TAG SEQADV 4YXB ASP A 4 UNP P26418 EXPRESSION TAG SEQADV 4YXB GLY B 1 UNP P26418 EXPRESSION TAG SEQADV 4YXB PRO B 2 UNP P26418 EXPRESSION TAG SEQADV 4YXB VAL B 3 UNP P26418 EXPRESSION TAG SEQADV 4YXB ASP B 4 UNP P26418 EXPRESSION TAG SEQRES 1 A 227 GLY PRO VAL ASP ASN TRP ARG ASP ASN LEU VAL ARG GLN SEQRES 2 A 227 VAL GLN HIS SER GLU LEU GLU LEU VAL ALA ASN PHE ALA SEQRES 3 A 227 ASP ILE PRO LEU ARG LEU SER GLN ILE LEU LYS LEU LYS SEQRES 4 A 227 PRO GLY ASP VAL LEU PRO ILE GLU LYS PRO ASP ARG ILE SEQRES 5 A 227 ILE ALA HIS VAL ASP GLY VAL PRO VAL LEU THR SER GLN SEQRES 6 A 227 TYR GLY THR VAL ASN GLY GLN TYR ALA LEU ARG VAL GLU SEQRES 7 A 227 HIS LEU ILE ASN PRO ILE LEU ASN SER LEU ASN GLU GLU SEQRES 8 A 227 GLN PRO LYS ASN ASN PRO SER ASP GLU ASN THR GLY ALA SEQRES 9 A 227 LEU ASP ASP LEU TRP ALA ASP ALA LEU ASN GLU GLN LYS SEQRES 10 A 227 ALA THR THR THR LYS SER ALA ALA ASP ALA VAL PHE GLN SEQRES 11 A 227 GLN LEU GLY GLY GLY ASP VAL SER GLY ALA MSE GLN ASP SEQRES 12 A 227 ILE ASP LEU ILE MSE ASP ILE PRO VAL LYS LEU THR VAL SEQRES 13 A 227 GLU LEU GLY ARG THR ARG MSE THR ILE LYS GLU LEU LEU SEQRES 14 A 227 ARG LEU THR GLN GLY SER VAL VAL ALA LEU ASP GLY LEU SEQRES 15 A 227 ALA GLY GLU PRO LEU ASP ILE LEU ILE ASN GLY TYR LEU SEQRES 16 A 227 ILE ALA GLN GLY GLU VAL VAL VAL VAL ALA ASP LYS TYR SEQRES 17 A 227 GLY VAL ARG ILE THR ASP ILE ILE THR PRO SER GLU ARG SEQRES 18 A 227 MSE ARG ARG LEU SER ARG SEQRES 1 B 227 GLY PRO VAL ASP ASN TRP ARG ASP ASN LEU VAL ARG GLN SEQRES 2 B 227 VAL GLN HIS SER GLU LEU GLU LEU VAL ALA ASN PHE ALA SEQRES 3 B 227 ASP ILE PRO LEU ARG LEU SER GLN ILE LEU LYS LEU LYS SEQRES 4 B 227 PRO GLY ASP VAL LEU PRO ILE GLU LYS PRO ASP ARG ILE SEQRES 5 B 227 ILE ALA HIS VAL ASP GLY VAL PRO VAL LEU THR SER GLN SEQRES 6 B 227 TYR GLY THR VAL ASN GLY GLN TYR ALA LEU ARG VAL GLU SEQRES 7 B 227 HIS LEU ILE ASN PRO ILE LEU ASN SER LEU ASN GLU GLU SEQRES 8 B 227 GLN PRO LYS ASN ASN PRO SER ASP GLU ASN THR GLY ALA SEQRES 9 B 227 LEU ASP ASP LEU TRP ALA ASP ALA LEU ASN GLU GLN LYS SEQRES 10 B 227 ALA THR THR THR LYS SER ALA ALA ASP ALA VAL PHE GLN SEQRES 11 B 227 GLN LEU GLY GLY GLY ASP VAL SER GLY ALA MSE GLN ASP SEQRES 12 B 227 ILE ASP LEU ILE MSE ASP ILE PRO VAL LYS LEU THR VAL SEQRES 13 B 227 GLU LEU GLY ARG THR ARG MSE THR ILE LYS GLU LEU LEU SEQRES 14 B 227 ARG LEU THR GLN GLY SER VAL VAL ALA LEU ASP GLY LEU SEQRES 15 B 227 ALA GLY GLU PRO LEU ASP ILE LEU ILE ASN GLY TYR LEU SEQRES 16 B 227 ILE ALA GLN GLY GLU VAL VAL VAL VAL ALA ASP LYS TYR SEQRES 17 B 227 GLY VAL ARG ILE THR ASP ILE ILE THR PRO SER GLU ARG SEQRES 18 B 227 MSE ARG ARG LEU SER ARG SEQRES 1 C 6 VAL PHE GLN GLN LEU GLY SEQRES 1 D 80 GLY ALA LEU ASP ASP LEU TRP ALA ASP GLU LEU GLY ARG SEQRES 2 D 80 THR ARG MSE THR ILE LYS GLU LEU LEU ARG LEU THR GLN SEQRES 3 D 80 GLY SER VAL VAL ALA LEU ASP GLY LEU ALA GLY GLU PRO SEQRES 4 D 80 LEU ASP ILE LEU ILE ASN GLY TYR LEU ILE ALA GLN GLY SEQRES 5 D 80 GLU VAL VAL VAL VAL ALA ASP LYS TYR GLY VAL ARG ILE SEQRES 6 D 80 THR ASP ILE ILE THR PRO SER GLU ARG MSE ARG ARG LEU SEQRES 7 D 80 SER ARG SEQRES 1 E 6 UNK UNK UNK UNK UNK UNK MODRES 4YXB MSE A 141 MET MODIFIED RESIDUE MODRES 4YXB MSE A 148 MET MODIFIED RESIDUE MODRES 4YXB MSE A 163 MET MODIFIED RESIDUE MODRES 4YXB MSE A 222 MET MODIFIED RESIDUE MODRES 4YXB MSE B 148 MET MODIFIED RESIDUE MODRES 4YXB MSE B 163 MET MODIFIED RESIDUE MODRES 4YXB MSE B 222 MET MODIFIED RESIDUE HET MSE A 141 8 HET MSE A 148 8 HET MSE A 163 8 HET MSE A 222 8 HET MSE B 148 8 HET MSE B 163 8 HET MSE B 222 8 HET IMD A 301 5 HETNAM MSE SELENOMETHIONINE HETNAM IMD IMIDAZOLE FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 6 IMD C3 H5 N2 1+ FORMUL 7 HOH *23(H2 O) HELIX 1 AA1 LEU A 32 LEU A 38 1 7 HELIX 2 AA2 ILE A 81 GLU A 90 1 10 HELIX 3 AA3 ASP A 145 ASP A 149 5 5 HELIX 4 AA4 THR A 164 ARG A 170 1 7 HELIX 5 AA5 THR A 217 SER A 226 1 10 HELIX 6 AA6 TRP B 6 LEU B 10 5 5 HELIX 7 AA7 LEU B 32 LEU B 38 1 7 HELIX 8 AA8 ILE B 81 GLU B 90 1 10 HELIX 9 AA9 ILE B 144 ASP B 149 1 6 HELIX 10 AB1 ILE B 165 LEU B 171 1 7 HELIX 11 AB2 THR B 217 ARG B 227 1 11 HELIX 12 AB3 LEU D 105 ALA D 110 1 6 SHEET 1 AA110 VAL A 43 ILE A 46 0 SHEET 2 AA110 LYS A 207 ILE A 215 -1 O VAL A 210 N LEU A 44 SHEET 3 AA110 TYR A 194 VAL A 204 -1 N GLU A 200 O ARG A 211 SHEET 4 AA110 LEU A 187 ILE A 191 -1 N LEU A 187 O GLY A 199 SHEET 5 AA110 PRO A 151 MSE A 163 -1 N THR A 155 O LEU A 190 SHEET 6 AA110 LEU A 19 ARG A 31 -1 N LEU A 19 O MSE A 163 SHEET 7 AA110 ILE A 52 VAL A 56 -1 O HIS A 55 N VAL A 22 SHEET 8 AA110 VAL A 59 THR A 68 -1 O LEU A 62 N ALA A 54 SHEET 9 AA110 GLN A 72 LEU A 80 -1 O ALA A 74 N GLY A 67 SHEET 10 AA110 VAL A 176 LEU A 182 -1 O LEU A 179 N TYR A 73 SHEET 1 AA2 9 VAL A 43 ILE A 46 0 SHEET 2 AA2 9 LYS A 207 ILE A 215 -1 O VAL A 210 N LEU A 44 SHEET 3 AA2 9 TYR A 194 VAL A 204 -1 N GLU A 200 O ARG A 211 SHEET 4 AA2 9 LEU A 187 ILE A 191 -1 N LEU A 187 O GLY A 199 SHEET 5 AA2 9 PRO A 151 MSE A 163 -1 N THR A 155 O LEU A 190 SHEET 6 AA2 9 LEU A 19 ARG A 31 -1 N LEU A 19 O MSE A 163 SHEET 7 AA2 9 ILE A 52 VAL A 56 -1 O HIS A 55 N VAL A 22 SHEET 8 AA2 9 VAL A 59 THR A 68 -1 O LEU A 62 N ALA A 54 SHEET 9 AA2 9 GLN C 130 GLN C 131 -1 O GLN C 130 N THR A 68 SHEET 1 AA311 VAL B 43 PRO B 45 0 SHEET 2 AA311 LYS B 207 ILE B 215 -1 O VAL B 210 N LEU B 44 SHEET 3 AA311 TYR B 194 VAL B 204 -1 N VAL B 202 O GLY B 209 SHEET 4 AA311 LEU B 187 ILE B 191 -1 N ILE B 189 O ILE B 196 SHEET 5 AA311 PRO B 151 THR B 164 -1 N THR B 155 O LEU B 190 SHEET 6 AA311 VAL B 176 LEU B 182 -1 O ASP B 180 N ARG B 160 SHEET 7 AA311 GLN B 72 LEU B 80 -1 N TYR B 73 O LEU B 179 SHEET 8 AA311 VAL B 59 VAL B 69 -1 N GLN B 65 O ARG B 76 SHEET 9 AA311 ILE B 52 VAL B 56 -1 N ILE B 52 O SER B 64 SHEET 10 AA311 GLU B 18 ARG B 31 -1 N VAL B 22 O HIS B 55 SHEET 11 AA311 PRO B 151 THR B 164 -1 O MSE B 163 N LEU B 19 LINK C ALA A 140 N MSE A 141 1555 1555 1.34 LINK C MSE A 141 N GLN A 142 1555 1555 1.34 LINK C ILE A 147 N MSE A 148 1555 1555 1.33 LINK C MSE A 148 N ASP A 149 1555 1555 1.33 LINK C ARG A 162 N MSE A 163 1555 1555 1.32 LINK C MSE A 163 N THR A 164 1555 1555 1.33 LINK C ARG A 221 N MSE A 222 1555 1555 1.33 LINK C MSE A 222 N ARG A 223 1555 1555 1.34 LINK C ILE B 147 N MSE B 148 1555 1555 1.33 LINK C MSE B 148 N ASP B 149 1555 1555 1.33 LINK C ARG B 162 N MSE B 163 1555 1555 1.33 LINK C MSE B 163 N THR B 164 1555 1555 1.33 LINK C ARG B 221 N MSE B 222 1555 1555 1.33 LINK C MSE B 222 N ARG B 223 1555 1555 1.32 LINK C UNK E 301 N UNK E 302 1555 1555 1.33 LINK C UNK E 302 N UNK E 303 1555 1555 1.32 LINK C UNK E 303 N UNK E 304 1555 1555 1.33 LINK C UNK E 304 N UNK E 305 1555 1555 1.33 LINK C UNK E 305 N UNK E 306 1555 1555 1.33 CISPEP 1 VAL A 69 ASN A 70 0 -19.33 CISPEP 2 GLY D 103 ALA D 104 0 -3.98 CISPEP 3 ALA D 110 ASP D 111 0 3.44 SITE 1 AC1 4 TYR A 66 TYR A 73 VAL A 201 LEU C 132 CRYST1 75.150 81.500 89.960 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013307 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012270 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011116 0.00000