HEADER IMMUNE SYSTEM 23-MAR-15 4YY7 TITLE THE STRUCTURE OF HEMAGGLUTININ FROM A H6N1 INFLUENZA VIRUS TITLE 2 (A/CHICKEN/TAIWAN/A2837/2013) IN COMPLEX WITH AVIAN RECEPTOR ANALOG TITLE 3 3'SLNLN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HA1; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HA2; COMPND 7 CHAIN: B, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNIDENTIFIED INFLUENZA VIRUS; SOURCE 3 ORGANISM_TAXID: 119212; SOURCE 4 EXPRESSION_SYSTEM: INSECT CELL EXPRESSION VECTOR PTIE1; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 266783; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: UNIDENTIFIED INFLUENZA VIRUS; SOURCE 8 ORGANISM_TAXID: 119212; SOURCE 9 EXPRESSION_SYSTEM: INSECT CELL EXPRESSION VECTOR PTIE1; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 266783 KEYWDS HEMAGGLUTININ, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR F.WANG,J.QI,Y.BI,W.ZHANG,M.WANG,M.WANG,J.LIU,J.YAN,Y.SHI,G.F.GAO REVDAT 4 20-NOV-24 4YY7 1 HETSYN LINK REVDAT 3 29-JUL-20 4YY7 1 COMPND JRNL REMARK HETNAM REVDAT 3 2 1 LINK SITE ATOM REVDAT 2 20-APR-16 4YY7 1 JRNL REVDAT 1 23-MAR-16 4YY7 0 JRNL AUTH F.WANG,J.QI,Y.BI,W.ZHANG,M.WANG,M.WANG,J.LIU,J.YAN,Y.SHI, JRNL AUTH 2 G.F.GAO JRNL TITL STRUCTURE OF HEMAGGLUTININ FROM A H6N1 INFLUENZA VIRUS JRNL TITL 2 (A/CHICKEN/TAIWAN/A2837/2013) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 27681 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1387 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.4558 - 6.4413 0.97 2574 149 0.1728 0.1827 REMARK 3 2 6.4413 - 5.1149 0.99 2628 136 0.1815 0.2076 REMARK 3 3 5.1149 - 4.4690 0.98 2668 134 0.1646 0.1800 REMARK 3 4 4.4690 - 4.0607 0.99 2573 152 0.1790 0.2196 REMARK 3 5 4.0607 - 3.7698 0.99 2673 130 0.2099 0.2623 REMARK 3 6 3.7698 - 3.5476 0.99 2630 149 0.2268 0.2526 REMARK 3 7 3.5476 - 3.3700 0.99 2623 143 0.2364 0.2725 REMARK 3 8 3.3700 - 3.2233 0.99 2610 127 0.2487 0.3371 REMARK 3 9 3.2233 - 3.0993 0.99 2696 124 0.2859 0.2952 REMARK 3 10 3.0993 - 2.9923 0.98 2619 143 0.2973 0.3524 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 8176 REMARK 3 ANGLE : 1.001 11096 REMARK 3 CHIRALITY : 0.391 1226 REMARK 3 PLANARITY : 0.006 1424 REMARK 3 DIHEDRAL : 16.760 2966 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 63.8886 55.8808 8.9029 REMARK 3 T TENSOR REMARK 3 T11: 0.5506 T22: 0.6085 REMARK 3 T33: 0.5972 T12: -0.0023 REMARK 3 T13: -0.0082 T23: -0.0538 REMARK 3 L TENSOR REMARK 3 L11: 0.2886 L22: 0.5987 REMARK 3 L33: 0.0309 L12: 0.0001 REMARK 3 L13: -0.0325 L23: -0.1486 REMARK 3 S TENSOR REMARK 3 S11: 0.0222 S12: -0.0069 S13: -0.0062 REMARK 3 S21: 0.0109 S22: -0.0337 S23: -0.1344 REMARK 3 S31: -0.0059 S32: 0.0129 S33: 0.0003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YY7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000208273. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SCALA REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27681 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.990 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.83400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM THIOCYANATE, 20% W/V REMARK 280 POLYETHYLENE GLYCOL 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 34640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 61230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -115.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 145.15800 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 83.80701 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 167.61402 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 34590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 61260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -116.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 96.77200 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 48.38600 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 83.80701 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 121 CG2 REMARK 470 THR C 121 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS D 452 O LEU D 455 1.90 REMARK 500 O LYS B 452 O LEU B 455 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 23 73.73 53.62 REMARK 500 LYS A 53 -127.19 57.34 REMARK 500 SER A 143 -151.18 -135.05 REMARK 500 ASP A 155 50.44 -49.60 REMARK 500 SER A 156 -70.61 170.53 REMARK 500 ALA A 157 -170.75 -62.14 REMARK 500 ASN A 222 46.42 37.15 REMARK 500 TRP A 253 -65.62 -134.15 REMARK 500 ASN A 262 -18.00 68.51 REMARK 500 ALA B 334 -71.92 -79.42 REMARK 500 SER B 361 -148.97 -112.73 REMARK 500 ASN B 389 49.71 -96.94 REMARK 500 ASP B 396 8.34 -68.21 REMARK 500 SER B 400 -177.47 -66.78 REMARK 500 ARG B 456 -55.70 -123.37 REMARK 500 ASP B 474 -148.96 -82.62 REMARK 500 THR B 485 50.77 -110.24 REMARK 500 ASN C 10 -177.02 -170.08 REMARK 500 ASN C 23 72.60 54.18 REMARK 500 LYS C 53 -124.65 59.95 REMARK 500 GLU C 109 -20.61 -140.74 REMARK 500 SER C 143 -151.58 -134.30 REMARK 500 ASP C 155 -69.52 4.63 REMARK 500 ALA C 157 -176.87 -62.75 REMARK 500 ASN C 222 47.36 37.37 REMARK 500 TRP C 253 -65.76 -134.60 REMARK 500 LYS C 263 -165.78 -76.71 REMARK 500 ALA D 334 -72.00 -78.68 REMARK 500 SER D 361 -151.27 -113.18 REMARK 500 ASN D 389 50.51 -98.15 REMARK 500 ASP D 396 9.25 -68.83 REMARK 500 SER D 400 -177.03 -66.58 REMARK 500 ARG D 456 -56.70 -126.85 REMARK 500 ASP D 474 -147.32 -83.31 REMARK 500 THR D 485 51.71 -111.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 630 REMARK 630 MOLECULE TYPE: OLIGOSACCHARIDE SUBSTRATE ANALOG REMARK 630 MOLECULE NAME: 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 630 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 630 REMARK 630 M RES C SSSEQI REMARK 630 NAG A 401 REMARK 630 NAG B 501 REMARK 630 NAG C 601 REMARK 630 NAG D 501 REMARK 630 SOURCE: NULL REMARK 630 TAXONOMY: NULL REMARK 630 SUBCOMP: NULL REMARK 630 DETAILS: OLIGOSACCHARIDE DBREF 4YY7 A 1 325 PDB 4YY7 4YY7 1 325 DBREF 4YY7 B 330 493 PDB 4YY7 4YY7 330 493 DBREF 4YY7 C 1 325 PDB 4YY7 4YY7 1 325 DBREF 4YY7 D 330 493 PDB 4YY7 4YY7 330 493 SEQRES 1 A 325 ASP LYS ILE CYS ILE GLY TYR HIS ALA ASN ASN SER THR SEQRES 2 A 325 THR GLN VAL ASP THR LEU LEU GLU LYS ASN VAL THR VAL SEQRES 3 A 325 THR HIS SER VAL GLU LEU LEU GLU ASN GLN LYS GLU LYS SEQRES 4 A 325 ARG PHE CYS LYS ILE MET ASN LYS ALA PRO LEU ASP LEU SEQRES 5 A 325 LYS ASP CYS THR ILE GLU GLY TRP ILE LEU GLY ASN PRO SEQRES 6 A 325 LYS CYS ASP LEU LEU LEU GLY ASP GLN SER TRP SER TYR SEQRES 7 A 325 ILE VAL GLU ARG PRO ASN ALA GLN ASN GLY ILE CYS TYR SEQRES 8 A 325 PRO GLY VAL LEU ASN GLU LEU GLU GLU LEU LYS ALA PHE SEQRES 9 A 325 ILE GLY SER GLY GLU ARG VAL GLU ARG PHE GLU MET PHE SEQRES 10 A 325 PRO LYS SER THR TRP ALA GLY VAL ASP THR SER ARG GLY SEQRES 11 A 325 VAL THR ASN ALA CYS PRO SER TYR THR LEU ASP SER SER SEQRES 12 A 325 PHE TYR ARG ASN LEU VAL TRP LEU VAL LYS THR ASP SER SEQRES 13 A 325 ALA THR TYR PRO VAL ILE LYS GLY THR TYR ASN ASN THR SEQRES 14 A 325 GLY THR GLN PRO ILE LEU TYR PHE TRP GLY VAL HIS HIS SEQRES 15 A 325 PRO PRO ASP THR THR VAL GLN ASP ASN LEU TYR GLY SER SEQRES 16 A 325 GLY ASP LYS TYR VAL ARG MET GLY THR GLU SER MET ASN SEQRES 17 A 325 PHE ALA LYS SER PRO GLU ILE ALA ALA ARG PRO ALA VAL SEQRES 18 A 325 ASN GLY GLN ARG SER ARG ILE ASP TYR TYR TRP SER VAL SEQRES 19 A 325 LEU ARG PRO GLY GLU THR LEU ASN VAL GLU SER ASN GLY SEQRES 20 A 325 ASN LEU ILE ALA PRO TRP TYR ALA TYR LYS PHE VAL SER SEQRES 21 A 325 THR ASN LYS LYS GLY ALA VAL PHE LYS SER ASP LEU PRO SEQRES 22 A 325 ILE GLU ASN CYS ASP ALA THR CYS GLN THR ILE ALA GLY SEQRES 23 A 325 VAL LEU LYS THR ASN LYS THR PHE GLN ASN VAL SER PRO SEQRES 24 A 325 LEU TRP ILE GLY GLU CYS PRO LYS TYR VAL LYS SER GLU SEQRES 25 A 325 SER LEU ARG LEU ALA THR GLY LEU ARG ASN VAL PRO GLN SEQRES 1 B 164 GLY ILE PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY SEQRES 2 B 164 TRP THR GLY MET ILE ASP GLY TRP TYR GLY TYR HIS HIS SEQRES 3 B 164 GLU ASN SER GLN GLY SER GLY TYR ALA ALA ASP ARG GLU SEQRES 4 B 164 SER THR GLN LYS ALA ILE ASP GLY ILE THR ASN LYS VAL SEQRES 5 B 164 ASN SER ILE ILE ASN LYS MET ASN THR GLN PHE GLU ALA SEQRES 6 B 164 VAL ASP HIS GLU PHE SER ASN LEU GLU ARG ARG ILE GLY SEQRES 7 B 164 ASN LEU ASN LYS ARG MET GLU ASP GLY PHE LEU ASP VAL SEQRES 8 B 164 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU LEU GLU ASN SEQRES 9 B 164 GLU ARG THR LEU ASP LEU HIS ASP ALA ASN VAL LYS ASN SEQRES 10 B 164 LEU TYR GLU LYS VAL LYS SER GLN LEU ARG ASP ASN ALA SEQRES 11 B 164 ASN ASP LEU GLY ASN GLY CYS PHE GLU PHE TRP HIS LYS SEQRES 12 B 164 CYS ASP ASN GLU CYS MET GLU SER VAL LYS ASN GLY THR SEQRES 13 B 164 TYR ASP TYR PRO LYS TYR GLN LYS SEQRES 1 C 325 ASP LYS ILE CYS ILE GLY TYR HIS ALA ASN ASN SER THR SEQRES 2 C 325 THR GLN VAL ASP THR LEU LEU GLU LYS ASN VAL THR VAL SEQRES 3 C 325 THR HIS SER VAL GLU LEU LEU GLU ASN GLN LYS GLU LYS SEQRES 4 C 325 ARG PHE CYS LYS ILE MET ASN LYS ALA PRO LEU ASP LEU SEQRES 5 C 325 LYS ASP CYS THR ILE GLU GLY TRP ILE LEU GLY ASN PRO SEQRES 6 C 325 LYS CYS ASP LEU LEU LEU GLY ASP GLN SER TRP SER TYR SEQRES 7 C 325 ILE VAL GLU ARG PRO ASN ALA GLN ASN GLY ILE CYS TYR SEQRES 8 C 325 PRO GLY VAL LEU ASN GLU LEU GLU GLU LEU LYS ALA PHE SEQRES 9 C 325 ILE GLY SER GLY GLU ARG VAL GLU ARG PHE GLU MET PHE SEQRES 10 C 325 PRO LYS SER THR TRP ALA GLY VAL ASP THR SER ARG GLY SEQRES 11 C 325 VAL THR ASN ALA CYS PRO SER TYR THR LEU ASP SER SER SEQRES 12 C 325 PHE TYR ARG ASN LEU VAL TRP LEU VAL LYS THR ASP SER SEQRES 13 C 325 ALA THR TYR PRO VAL ILE LYS GLY THR TYR ASN ASN THR SEQRES 14 C 325 GLY THR GLN PRO ILE LEU TYR PHE TRP GLY VAL HIS HIS SEQRES 15 C 325 PRO PRO ASP THR THR VAL GLN ASP ASN LEU TYR GLY SER SEQRES 16 C 325 GLY ASP LYS TYR VAL ARG MET GLY THR GLU SER MET ASN SEQRES 17 C 325 PHE ALA LYS SER PRO GLU ILE ALA ALA ARG PRO ALA VAL SEQRES 18 C 325 ASN GLY GLN ARG SER ARG ILE ASP TYR TYR TRP SER VAL SEQRES 19 C 325 LEU ARG PRO GLY GLU THR LEU ASN VAL GLU SER ASN GLY SEQRES 20 C 325 ASN LEU ILE ALA PRO TRP TYR ALA TYR LYS PHE VAL SER SEQRES 21 C 325 THR ASN LYS LYS GLY ALA VAL PHE LYS SER ASP LEU PRO SEQRES 22 C 325 ILE GLU ASN CYS ASP ALA THR CYS GLN THR ILE ALA GLY SEQRES 23 C 325 VAL LEU LYS THR ASN LYS THR PHE GLN ASN VAL SER PRO SEQRES 24 C 325 LEU TRP ILE GLY GLU CYS PRO LYS TYR VAL LYS SER GLU SEQRES 25 C 325 SER LEU ARG LEU ALA THR GLY LEU ARG ASN VAL PRO GLN SEQRES 1 D 164 GLY ILE PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY SEQRES 2 D 164 TRP THR GLY MET ILE ASP GLY TRP TYR GLY TYR HIS HIS SEQRES 3 D 164 GLU ASN SER GLN GLY SER GLY TYR ALA ALA ASP ARG GLU SEQRES 4 D 164 SER THR GLN LYS ALA ILE ASP GLY ILE THR ASN LYS VAL SEQRES 5 D 164 ASN SER ILE ILE ASN LYS MET ASN THR GLN PHE GLU ALA SEQRES 6 D 164 VAL ASP HIS GLU PHE SER ASN LEU GLU ARG ARG ILE GLY SEQRES 7 D 164 ASN LEU ASN LYS ARG MET GLU ASP GLY PHE LEU ASP VAL SEQRES 8 D 164 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU LEU GLU ASN SEQRES 9 D 164 GLU ARG THR LEU ASP LEU HIS ASP ALA ASN VAL LYS ASN SEQRES 10 D 164 LEU TYR GLU LYS VAL LYS SER GLN LEU ARG ASP ASN ALA SEQRES 11 D 164 ASN ASP LEU GLY ASN GLY CYS PHE GLU PHE TRP HIS LYS SEQRES 12 D 164 CYS ASP ASN GLU CYS MET GLU SER VAL LYS ASN GLY THR SEQRES 13 D 164 TYR ASP TYR PRO LYS TYR GLN LYS HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 15 HET GAL F 2 11 HET SIA F 3 20 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 15 HET GAL H 2 11 HET SIA H 3 20 HET NAG A 401 14 HET NAG B 501 14 HET NAG C 601 14 HET NAG D 501 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM SIA N-ACETYL-ALPHA-NEURAMINIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN SIA N-ACETYLNEURAMINIC ACID; SIALIC ACID; ALPHA-SIALIC HETSYN 2 SIA ACID; O-SIALIC ACID FORMUL 5 NAG 10(C8 H15 N O6) FORMUL 6 GAL 2(C6 H12 O6) FORMUL 6 SIA 2(C11 H19 N O9) HELIX 1 AA1 THR A 56 GLY A 63 1 8 HELIX 2 AA2 ASN A 64 LEU A 71 5 8 HELIX 3 AA3 GLU A 97 SER A 107 1 11 HELIX 4 AA4 PRO A 118 TRP A 122 5 5 HELIX 5 AA5 ASP A 185 GLY A 194 1 10 HELIX 6 AA6 ASP B 366 MET B 388 1 23 HELIX 7 AA7 SER B 400 LEU B 402 5 3 HELIX 8 AA8 GLU B 403 LEU B 455 1 53 HELIX 9 AA9 ASP B 474 ASN B 483 1 10 HELIX 10 AB1 ASP B 487 LYS B 493 1 7 HELIX 11 AB2 THR C 56 GLY C 63 1 8 HELIX 12 AB3 ASN C 64 LEU C 71 5 8 HELIX 13 AB4 GLU C 97 SER C 107 1 11 HELIX 14 AB5 PRO C 118 TRP C 122 5 5 HELIX 15 AB6 ASP C 185 GLY C 194 1 10 HELIX 16 AB7 ASP D 366 MET D 388 1 23 HELIX 17 AB8 SER D 400 LEU D 402 5 3 HELIX 18 AB9 GLU D 403 LEU D 455 1 53 HELIX 19 AC1 ASP D 474 ASN D 483 1 10 HELIX 20 AC2 ASP D 487 LYS D 493 1 7 SHEET 1 AA1 5 GLY B 360 ALA B 365 0 SHEET 2 AA1 5 TYR B 351 ASN B 357 -1 N TYR B 353 O ALA B 364 SHEET 3 AA1 5 LYS A 2 TYR A 7 -1 N LYS A 2 O GLU B 356 SHEET 4 AA1 5 CYS B 466 PHE B 469 -1 O PHE B 467 N ILE A 3 SHEET 5 AA1 5 ALA B 459 ASP B 461 -1 N ASN B 460 O GLU B 468 SHEET 1 AA2 2 GLN A 15 VAL A 16 0 SHEET 2 AA2 2 VAL A 24 THR A 25 -1 O VAL A 24 N VAL A 16 SHEET 1 AA3 2 SER A 29 GLU A 31 0 SHEET 2 AA3 2 ARG A 315 ALA A 317 -1 O LEU A 316 N VAL A 30 SHEET 1 AA4 3 LEU A 33 GLU A 34 0 SHEET 2 AA4 3 PHE A 294 GLN A 295 1 O PHE A 294 N GLU A 34 SHEET 3 AA4 3 LYS A 307 TYR A 308 1 O LYS A 307 N GLN A 295 SHEET 1 AA5 2 PHE A 41 ILE A 44 0 SHEET 2 AA5 2 ILE A 274 ALA A 279 1 O CYS A 277 N LYS A 43 SHEET 1 AA6 3 LEU A 50 ASP A 51 0 SHEET 2 AA6 3 ILE A 79 GLU A 81 1 O VAL A 80 N LEU A 50 SHEET 3 AA6 3 VAL A 267 LYS A 269 1 O PHE A 268 N ILE A 79 SHEET 1 AA7 6 GLN A 74 SER A 75 0 SHEET 2 AA7 6 GLY A 108 GLU A 115 -1 O VAL A 111 N GLN A 74 SHEET 3 AA7 6 TYR A 254 SER A 260 -1 O ALA A 255 N PHE A 114 SHEET 4 AA7 6 ILE A 174 HIS A 182 -1 N LEU A 175 O TYR A 256 SHEET 5 AA7 6 ARG A 227 LEU A 235 -1 O ASP A 229 N VAL A 180 SHEET 6 AA7 6 GLY A 93 LEU A 95 1 N VAL A 94 O TYR A 230 SHEET 1 AA8 6 GLN A 74 SER A 75 0 SHEET 2 AA8 6 GLY A 108 GLU A 115 -1 O VAL A 111 N GLN A 74 SHEET 3 AA8 6 TYR A 254 SER A 260 -1 O ALA A 255 N PHE A 114 SHEET 4 AA8 6 ILE A 174 HIS A 182 -1 N LEU A 175 O TYR A 256 SHEET 5 AA8 6 LEU A 249 PRO A 252 -1 O ILE A 250 N GLY A 179 SHEET 6 AA8 6 LEU A 148 TRP A 150 -1 N VAL A 149 O ALA A 251 SHEET 1 AA9 2 VAL A 125 ASP A 126 0 SHEET 2 AA9 2 VAL A 152 LYS A 153 -1 O VAL A 152 N ASP A 126 SHEET 1 AB1 4 ILE A 162 ASN A 167 0 SHEET 2 AB1 4 THR A 240 SER A 245 -1 O VAL A 243 N GLY A 164 SHEET 3 AB1 4 VAL A 200 THR A 204 -1 N GLY A 203 O ASN A 242 SHEET 4 AB1 4 MET A 207 LYS A 211 -1 O MET A 207 N THR A 204 SHEET 1 AB2 2 CYS A 281 THR A 283 0 SHEET 2 AB2 2 TRP A 301 GLY A 303 -1 O ILE A 302 N GLN A 282 SHEET 1 AB3 5 GLY D 360 ALA D 365 0 SHEET 2 AB3 5 TYR D 351 ASN D 357 -1 N TYR D 353 O ALA D 364 SHEET 3 AB3 5 LYS C 2 TYR C 7 -1 N LYS C 2 O GLU D 356 SHEET 4 AB3 5 CYS D 466 PHE D 469 -1 O PHE D 467 N ILE C 3 SHEET 5 AB3 5 ALA D 459 ASP D 461 -1 N ASN D 460 O GLU D 468 SHEET 1 AB4 2 GLN C 15 VAL C 16 0 SHEET 2 AB4 2 VAL C 24 THR C 25 -1 O VAL C 24 N VAL C 16 SHEET 1 AB5 2 SER C 29 GLU C 31 0 SHEET 2 AB5 2 ARG C 315 ALA C 317 -1 O LEU C 316 N VAL C 30 SHEET 1 AB6 3 LEU C 33 GLU C 34 0 SHEET 2 AB6 3 PHE C 294 GLN C 295 1 O PHE C 294 N GLU C 34 SHEET 3 AB6 3 LYS C 307 TYR C 308 1 O LYS C 307 N GLN C 295 SHEET 1 AB7 2 PHE C 41 ILE C 44 0 SHEET 2 AB7 2 ILE C 274 ALA C 279 1 O CYS C 277 N LYS C 43 SHEET 1 AB8 3 LEU C 50 ASP C 51 0 SHEET 2 AB8 3 ILE C 79 GLU C 81 1 O VAL C 80 N LEU C 50 SHEET 3 AB8 3 VAL C 267 LYS C 269 1 O PHE C 268 N ILE C 79 SHEET 1 AB9 6 GLN C 74 SER C 75 0 SHEET 2 AB9 6 GLY C 108 GLU C 115 -1 O VAL C 111 N GLN C 74 SHEET 3 AB9 6 TYR C 254 SER C 260 -1 O ALA C 255 N PHE C 114 SHEET 4 AB9 6 ILE C 174 HIS C 182 -1 N LEU C 175 O TYR C 256 SHEET 5 AB9 6 ARG C 227 LEU C 235 -1 O TYR C 231 N TRP C 178 SHEET 6 AB9 6 GLY C 93 LEU C 95 1 N VAL C 94 O TYR C 230 SHEET 1 AC1 6 GLN C 74 SER C 75 0 SHEET 2 AC1 6 GLY C 108 GLU C 115 -1 O VAL C 111 N GLN C 74 SHEET 3 AC1 6 TYR C 254 SER C 260 -1 O ALA C 255 N PHE C 114 SHEET 4 AC1 6 ILE C 174 HIS C 182 -1 N LEU C 175 O TYR C 256 SHEET 5 AC1 6 LEU C 249 PRO C 252 -1 O ILE C 250 N GLY C 179 SHEET 6 AC1 6 LEU C 148 TRP C 150 -1 N VAL C 149 O ALA C 251 SHEET 1 AC2 2 VAL C 125 ASP C 126 0 SHEET 2 AC2 2 VAL C 152 LYS C 153 -1 O VAL C 152 N ASP C 126 SHEET 1 AC3 4 ILE C 162 ASN C 167 0 SHEET 2 AC3 4 THR C 240 SER C 245 -1 O VAL C 243 N GLY C 164 SHEET 3 AC3 4 VAL C 200 GLY C 203 -1 N GLY C 203 O ASN C 242 SHEET 4 AC3 4 ASN C 208 LYS C 211 -1 O PHE C 209 N MET C 202 SHEET 1 AC4 2 CYS C 281 THR C 283 0 SHEET 2 AC4 2 TRP C 301 GLY C 303 -1 O ILE C 302 N GLN C 282 SSBOND 1 CYS A 4 CYS B 466 1555 1555 2.04 SSBOND 2 CYS A 42 CYS A 277 1555 1555 2.04 SSBOND 3 CYS A 55 CYS A 67 1555 1555 2.04 SSBOND 4 CYS A 90 CYS A 135 1555 1555 2.04 SSBOND 5 CYS A 281 CYS A 305 1555 1555 2.03 SSBOND 6 CYS B 473 CYS B 477 1555 1555 2.03 SSBOND 7 CYS C 4 CYS D 466 1555 1555 2.03 SSBOND 8 CYS C 42 CYS C 277 1555 1555 2.04 SSBOND 9 CYS C 55 CYS C 67 1555 1555 2.04 SSBOND 10 CYS C 90 CYS C 135 1555 1555 2.04 SSBOND 11 CYS C 281 CYS C 305 1555 1555 2.03 SSBOND 12 CYS D 473 CYS D 477 1555 1555 2.03 LINK ND2 ASN A 23 C1 NAG A 401 1555 1555 1.44 LINK ND2 ASN A 167 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN B 483 C1 NAG B 501 1555 1555 1.45 LINK ND2 ASN C 23 C1 NAG C 601 1555 1555 1.44 LINK ND2 ASN C 167 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN D 483 C1 NAG D 501 1555 1555 1.45 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG F 1 C1 GAL F 2 1555 1555 1.43 LINK O3 GAL F 2 C2 SIA F 3 1555 1555 1.43 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.45 LINK O4 NAG H 1 C1 GAL H 2 1555 1555 1.45 LINK O3 GAL H 2 C2 SIA H 3 1555 1555 1.43 CRYST1 96.772 96.772 132.506 90.00 90.00 120.00 P 3 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010334 0.005966 0.000000 0.00000 SCALE2 0.000000 0.011932 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007547 0.00000