HEADER SUGAR BINDING PROTEIN 08-APR-15 4Z8B TITLE CRYSTAL STRUCTURE OF A DGL MUTANT - H51G H131N COMPND MOL_ID: 1; COMPND 2 MOLECULE: LECTIN ALPHA CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DIOCLEA GRANDIFLORA; SOURCE 3 ORGANISM_COMMON: MUCANA; SOURCE 4 ORGANISM_TAXID: 3837; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS LECTIN, DIOCLEA GRANDIFLORA, H31A-H151N MUTANT, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.ZAMORA-CABALLERO,A.PEREZ,L.SANZ,J.BRAVO,J.J.CALVETE REVDAT 6 10-JAN-24 4Z8B 1 HETSYN REVDAT 5 29-JUL-20 4Z8B 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE REVDAT 4 15-JUN-16 4Z8B 1 REVDAT 3 19-AUG-15 4Z8B 1 JRNL REVDAT 2 12-AUG-15 4Z8B 1 JRNL REVDAT 1 22-JUL-15 4Z8B 0 JRNL AUTH S.ZAMORA-CABALLERO,A.PEREZ,L.SANZ,J.BRAVO,J.J.CALVETE JRNL TITL QUATERNARY STRUCTURE OF DIOCLEA GRANDIFLORA LECTIN ASSESSED JRNL TITL 2 BY EQUILIBRIUM SEDIMENTATION AND CRYSTALLOGRAPHIC ANALYSIS JRNL TITL 3 OF RECOMBINANT MUTANTS. JRNL REF FEBS LETT. V. 589 2290 2015 JRNL REFN ISSN 0014-5793 JRNL PMID 26226421 JRNL DOI 10.1016/J.FEBSLET.2015.07.020 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.450 REMARK 3 COMPLETENESS FOR RANGE (%) : 74.7 REMARK 3 NUMBER OF REFLECTIONS : 12680 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.790 REMARK 3 FREE R VALUE TEST SET COUNT : 607 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.6813 - 3.0972 1.00 4173 204 0.1689 0.2010 REMARK 3 2 3.0972 - 2.4584 0.97 3896 189 0.2679 0.3259 REMARK 3 3 2.4584 - 2.1476 0.68 2683 150 0.2370 0.3135 REMARK 3 4 2.1476 - 1.9513 0.33 1321 64 0.2007 0.2064 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 1863 REMARK 3 ANGLE : 0.766 2543 REMARK 3 CHIRALITY : 0.029 289 REMARK 3 PLANARITY : 0.003 321 REMARK 3 DIHEDRAL : 10.918 650 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.0351 14.7456 23.1657 REMARK 3 T TENSOR REMARK 3 T11: 0.7014 T22: 0.3400 REMARK 3 T33: 0.1759 T12: 0.1420 REMARK 3 T13: 0.2919 T23: -0.0205 REMARK 3 L TENSOR REMARK 3 L11: 0.3238 L22: 0.5947 REMARK 3 L33: 1.0367 L12: 0.4101 REMARK 3 L13: 0.0795 L23: -0.1571 REMARK 3 S TENSOR REMARK 3 S11: -0.0346 S12: -0.1277 S13: 0.0578 REMARK 3 S21: 0.5236 S22: -0.1009 S23: 0.3093 REMARK 3 S31: -0.2945 S32: -0.5800 S33: 0.6568 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.1799 11.4257 19.5288 REMARK 3 T TENSOR REMARK 3 T11: 0.7533 T22: 0.1290 REMARK 3 T33: 0.1330 T12: 0.0694 REMARK 3 T13: 0.0655 T23: -0.0743 REMARK 3 L TENSOR REMARK 3 L11: 0.1964 L22: 1.9397 REMARK 3 L33: 0.8786 L12: -0.3179 REMARK 3 L13: 0.2574 L23: 0.3345 REMARK 3 S TENSOR REMARK 3 S11: -0.0944 S12: -0.2872 S13: -0.0512 REMARK 3 S21: 1.1038 S22: 0.2072 S23: 0.0267 REMARK 3 S31: -0.5695 S32: -0.4357 S33: 0.1537 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 105 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.6713 10.7648 9.3719 REMARK 3 T TENSOR REMARK 3 T11: 0.2542 T22: 0.2065 REMARK 3 T33: 0.2021 T12: 0.0620 REMARK 3 T13: 0.0891 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 1.5110 L22: 1.7920 REMARK 3 L33: 2.7778 L12: -0.3991 REMARK 3 L13: -0.0131 L23: 0.6471 REMARK 3 S TENSOR REMARK 3 S11: 0.0977 S12: 0.0505 S13: 0.0176 REMARK 3 S21: 0.4193 S22: 0.0199 S23: 0.4372 REMARK 3 S31: -0.3100 S32: -0.3395 S33: 0.0897 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Z8B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-APR-15. REMARK 100 THE DEPOSITION ID IS D_1000208338. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5-8 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12687 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 45.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.0400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 13.80 REMARK 200 R MERGE FOR SHELL (I) : 0.39600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1DGL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RESERVOIR SOLUTION:100 MM HEPES, 14% REMARK 280 POLYETHYLENE GLYCOL 400 PROTEIN SOLUTION: 10 MM HEPES, 2 MM REMARK 280 CL2CA, 2 MM CL2MN 3 MM X-MAN (5-BROMO-4-CHLORO-3-INDOLYL-ALPHA-D- REMARK 280 MANNOSE, PH 8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 31.17500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 33.54000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 54.31000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 31.17500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 33.54000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 54.31000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 31.17500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 33.54000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.31000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 31.17500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 33.54000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 54.31000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -91.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 462 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 ASN A 118 REMARK 465 SER A 119 REMARK 465 ILE A 120 REMARK 465 ALA A 121 REMARK 465 ASP A 122 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 14 73.33 -114.00 REMARK 500 GLU A 102 145.83 -171.53 REMARK 500 SER A 185 31.17 -96.07 REMARK 500 ASP A 203 -177.68 -69.44 REMARK 500 ARG A 204 -71.60 -65.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 302 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 8 OE2 REMARK 620 2 ASP A 10 OD2 101.2 REMARK 620 3 ASP A 19 OD1 159.8 98.3 REMARK 620 4 HIS A 24 NE2 95.7 97.3 87.0 REMARK 620 5 HOH A 412 O 86.3 82.2 91.2 178.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 10 OD1 REMARK 620 2 ASP A 10 OD2 54.8 REMARK 620 3 TYR A 12 O 75.3 113.0 REMARK 620 4 ASN A 14 OD1 143.4 161.8 78.5 REMARK 620 5 ASP A 19 OD2 103.2 71.1 81.7 97.8 REMARK 620 6 HOH A 405 O 61.5 104.2 83.7 90.7 161.3 REMARK 620 7 HOH A 415 O 109.7 72.6 174.3 95.8 99.4 96.2 REMARK 620 N 1 2 3 4 5 6 DBREF 4Z8B A 1 237 UNP P08902 LECA_DIOGR 1 237 SEQADV 4Z8B GLY A 51 UNP P08902 HIS 51 CONFLICT SEQADV 4Z8B ASN A 131 UNP P08902 HIS 131 CONFLICT SEQADV 4Z8B GLN A 155 UNP P08902 GLU 155 CONFLICT SEQADV 4Z8B LYS A 184 UNP P08902 SER 184 CONFLICT SEQRES 1 A 237 ALA ASP THR ILE VAL ALA VAL GLU LEU ASP SER TYR PRO SEQRES 2 A 237 ASN THR ASP ILE GLY ASP PRO ASN TYR PRO HIS ILE GLY SEQRES 3 A 237 ILE ASP ILE LYS SER ILE ARG SER LYS SER THR ALA ARG SEQRES 4 A 237 TRP ASN MET GLN THR GLY LYS VAL GLY THR VAL GLY ILE SEQRES 5 A 237 SER TYR ASN SER VAL ALA LYS ARG LEU SER ALA VAL VAL SEQRES 6 A 237 SER TYR SER GLY SER SER SER THR THR VAL SER TYR ASP SEQRES 7 A 237 VAL ASP LEU ASN ASN VAL LEU PRO GLU TRP VAL ARG VAL SEQRES 8 A 237 GLY LEU SER ALA THR THR GLY LEU TYR LYS GLU THR ASN SEQRES 9 A 237 THR ILE LEU SER TRP SER PHE THR SER LYS LEU LYS THR SEQRES 10 A 237 ASN SER ILE ALA ASP GLU ASN SER LEU HIS PHE SER PHE SEQRES 11 A 237 ASN LYS PHE SER GLN ASN PRO LYS ASP LEU ILE LEU GLN SEQRES 12 A 237 GLY ASP ALA PHE THR ASP SER ASP GLY ASN LEU GLN LEU SEQRES 13 A 237 THR LYS VAL SER SER SER GLY ASP PRO GLN GLY ASN SER SEQRES 14 A 237 VAL GLY ARG ALA LEU PHE TYR ALA PRO VAL HIS ILE TRP SEQRES 15 A 237 GLU LYS SER ALA VAL VAL ALA SER PHE ASP ALA THR PHE SEQRES 16 A 237 THR PHE LEU ILE LYS SER PRO ASP ARG GLU PRO ALA ASP SEQRES 17 A 237 GLY ILE THR PHE PHE ILE ALA ASN THR ASP THR SER ILE SEQRES 18 A 237 PRO SER GLY SER GLY GLY ARG LEU LEU GLY LEU PHE PRO SEQRES 19 A 237 ASP ALA ASN HET CA A 301 1 HET MN A 302 1 HET SO4 A 303 5 HET SO4 A 304 5 HET GOL A 305 14 HET XMM A 306 38 HETNAM CA CALCIUM ION HETNAM MN MANGANESE (II) ION HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM XMM 5-BROMO-4-CHLORO-1H-INDOL-3-YL ALPHA-D-MANNOPYRANOSIDE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN XMM (2R,3S,4S,5S,6R)-2-(5-BROMO-4-CHLORO-1H-INDOL-3-YLOXY)- HETSYN 2 XMM TETRAHYDRO-6-(HYDROXYMETHYL)-2H-PYRAN-3,4,5-TRIOL; (5- HETSYN 3 XMM BROMO-4-CHLORO-3-INDOLYL)-ALPHA-D-MANNOSE; 5-BROMO-4- HETSYN 4 XMM CHLORO-1H-INDOL-3-YL ALPHA-D-MANNOSIDE; 5-BROMO-4- HETSYN 5 XMM CHLORO-1H-INDOL-3-YL D-MANNOSIDE; 5-BROMO-4-CHLORO-1H- HETSYN 6 XMM INDOL-3-YL MANNOSIDE FORMUL 2 CA CA 2+ FORMUL 3 MN MN 2+ FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 GOL C3 H8 O3 FORMUL 7 XMM C14 H15 BR CL N O6 FORMUL 8 HOH *70(H2 O) HELIX 1 AA1 ASN A 14 GLY A 18 5 5 HELIX 2 AA2 ASP A 80 VAL A 84 5 5 HELIX 3 AA3 GLY A 226 LEU A 230 5 5 SHEET 1 AA1 7 SER A 36 ARG A 39 0 SHEET 2 AA1 7 HIS A 24 ILE A 29 -1 N ILE A 27 O SER A 36 SHEET 3 AA1 7 ILE A 4 ASP A 10 -1 N ALA A 6 O ASP A 28 SHEET 4 AA1 7 GLY A 209 ASN A 216 -1 O ILE A 210 N LEU A 9 SHEET 5 AA1 7 TRP A 88 THR A 96 -1 N ARG A 90 O ALA A 215 SHEET 6 AA1 7 VAL A 170 PHE A 175 -1 O PHE A 175 N VAL A 91 SHEET 7 AA1 7 LEU A 140 GLY A 144 -1 N GLN A 143 O ARG A 172 SHEET 1 AA2 6 SER A 36 ARG A 39 0 SHEET 2 AA2 6 HIS A 24 ILE A 29 -1 N ILE A 27 O SER A 36 SHEET 3 AA2 6 ILE A 4 ASP A 10 -1 N ALA A 6 O ASP A 28 SHEET 4 AA2 6 GLY A 209 ASN A 216 -1 O ILE A 210 N LEU A 9 SHEET 5 AA2 6 TRP A 88 THR A 96 -1 N ARG A 90 O ALA A 215 SHEET 6 AA2 6 VAL A 179 HIS A 180 -1 O VAL A 179 N VAL A 89 SHEET 1 AA3 6 THR A 73 ASP A 78 0 SHEET 2 AA3 6 ARG A 60 TYR A 67 -1 N ALA A 63 O VAL A 75 SHEET 3 AA3 6 VAL A 47 ASN A 55 -1 N THR A 49 O SER A 66 SHEET 4 AA3 6 VAL A 188 LEU A 198 -1 O ALA A 193 N ILE A 52 SHEET 5 AA3 6 THR A 105 LYS A 116 -1 N SER A 110 O THR A 194 SHEET 6 AA3 6 ASN A 124 PHE A 130 -1 O ASN A 124 N LEU A 115 SHEET 1 AA4 7 THR A 73 ASP A 78 0 SHEET 2 AA4 7 ARG A 60 TYR A 67 -1 N ALA A 63 O VAL A 75 SHEET 3 AA4 7 VAL A 47 ASN A 55 -1 N THR A 49 O SER A 66 SHEET 4 AA4 7 VAL A 188 LEU A 198 -1 O ALA A 193 N ILE A 52 SHEET 5 AA4 7 THR A 105 LYS A 116 -1 N SER A 110 O THR A 194 SHEET 6 AA4 7 LEU A 154 GLN A 155 -1 O LEU A 154 N ILE A 106 SHEET 7 AA4 7 PHE A 147 THR A 148 -1 N PHE A 147 O GLN A 155 LINK OE2 GLU A 8 MN MN A 302 1555 1555 2.23 LINK OD1 ASP A 10 CA CA A 301 1555 1555 2.37 LINK OD2 ASP A 10 CA CA A 301 1555 1555 2.41 LINK OD2 ASP A 10 MN MN A 302 1555 1555 2.09 LINK O TYR A 12 CA CA A 301 1555 1555 2.34 LINK OD1 ASN A 14 CA CA A 301 1555 1555 2.47 LINK OD2 ASP A 19 CA CA A 301 1555 1555 2.58 LINK OD1 ASP A 19 MN MN A 302 1555 1555 2.02 LINK NE2 HIS A 24 MN MN A 302 1555 1555 2.03 LINK CA CA A 301 O HOH A 405 1555 1555 2.38 LINK CA CA A 301 O HOH A 415 1555 1555 2.34 LINK MN MN A 302 O HOH A 412 1555 1555 1.81 CISPEP 1 ALA A 207 ASP A 208 0 2.93 CRYST1 62.350 67.080 108.620 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016038 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014908 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009206 0.00000