HEADER ISOMERASE 17-APR-15 4ZDD TITLE STRUCTURE OF YEAST D3,D2-ENOYL-COA ISOMERASE BOUND TO SULPHATE ION COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3,2-TRANS-ENOYL-COA ISOMERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DELTA(3),DELTA(2)-ENOYL-COA ISOMERASE,D3,D2-ENOYL-COA COMPND 5 ISOMERASE,DODECENOYL-COA ISOMERASE; COMPND 6 EC: 5.3.3.8; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 GENE: ECI1, YLR284C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CROTONASE, ISOMERASE, ENOYL-COA ISOMERASE, BETA-OXIDATION EXPDTA X-RAY DIFFRACTION AUTHOR G.U.ONWUKWE,M.K.KOSKI,R.K.WIERENGA REVDAT 3 10-JAN-24 4ZDD 1 REMARK REVDAT 2 18-NOV-15 4ZDD 1 JRNL REVDAT 1 11-NOV-15 4ZDD 0 JRNL AUTH G.U.ONWUKWE,M.K.KOSKI,P.PIHKO,W.SCHMITZ,R.K.WIERENGA JRNL TITL STRUCTURES OF YEAST PEROXISOMAL DELTA (3), DELTA JRNL TITL 2 (2)-ENOYL-COA ISOMERASE COMPLEXED WITH ACYL-COA SUBSTRATE JRNL TITL 3 ANALOGUES: THE IMPORTANCE OF HYDROGEN-BOND NETWORKS FOR THE JRNL TITL 4 REACTIVITY OF THE CATALYTIC BASE AND THE OXYANION HOLE. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 71 2178 2015 JRNL REFN ESSN 1399-0047 JRNL PMID 26527136 JRNL DOI 10.1107/S139900471501559X REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 9688 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 532 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 689 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.3070 REMARK 3 BIN FREE R VALUE SET COUNT : 43 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1968 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 9 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.61000 REMARK 3 B22 (A**2) : -2.61000 REMARK 3 B33 (A**2) : 8.46000 REMARK 3 B12 (A**2) : -1.30000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.567 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.309 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.224 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.332 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2023 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1927 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2735 ; 1.608 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4436 ; 0.799 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 245 ; 6.673 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 92 ;35.085 ;24.565 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 352 ;16.938 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;19.473 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 304 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2263 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 471 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 986 ; 4.341 ; 5.898 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 985 ; 4.317 ; 5.893 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1229 ; 6.492 ; 8.828 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1230 ; 6.493 ; 8.836 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1037 ; 5.722 ; 6.649 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1026 ; 5.282 ; 6.592 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1489 ; 8.206 ; 9.649 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2274 ;10.894 ;48.474 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2273 ;10.604 ;48.477 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4ZDD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-APR-15. REMARK 100 THE DEPOSITION ID IS D_1000209068. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 273 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.920 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10249 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 77.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 21.20 REMARK 200 R MERGE (I) : 0.21800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 22.80 REMARK 200 R MERGE FOR SHELL (I) : 1.34200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 1K39 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM NACITRATE PH 5.6, 1 M (LI)2SO4, REMARK 280 500 MM (NH4)2SO4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 61.04800 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 61.04800 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 61.04800 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 61.04800 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 61.04800 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 61.04800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -178.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 58.02700 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -100.50571 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 116.05400 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 302 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLN A 3 REMARK 465 GLU A 4 REMARK 465 ILE A 5 REMARK 465 ARG A 6 REMARK 465 GLY A 74 REMARK 465 ILE A 75 REMARK 465 ALA A 76 REMARK 465 LYS A 77 REMARK 465 ALA A 78 REMARK 465 GLN A 79 REMARK 465 GLY A 80 REMARK 465 ASP A 81 REMARK 465 ASP A 82 REMARK 465 THR A 83 REMARK 465 ASN A 84 REMARK 465 LYS A 85 REMARK 465 TYR A 86 REMARK 465 PRO A 87 REMARK 465 SER A 88 REMARK 465 GLU A 89 REMARK 465 GLN A 270 REMARK 465 LEU A 271 REMARK 465 GLY A 272 REMARK 465 SER A 273 REMARK 465 LYS A 274 REMARK 465 GLN A 275 REMARK 465 ARG A 276 REMARK 465 LYS A 277 REMARK 465 HIS A 278 REMARK 465 ARG A 279 REMARK 465 LEU A 280 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 16 71.68 -160.99 REMARK 500 ASN A 31 37.39 38.02 REMARK 500 SER A 61 -147.90 -132.98 REMARK 500 SER A 67 136.19 -174.82 REMARK 500 PRO A 149 40.03 -81.74 REMARK 500 ILE A 156 -161.04 -121.47 REMARK 500 ASN A 181 53.11 36.45 REMARK 500 LYS A 197 139.98 -171.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 DBREF 4ZDD A 1 280 UNP Q05871 ECI1_YEAST 1 280 SEQADV 4ZDD MET A -19 UNP Q05871 INITIATING METHIONINE SEQADV 4ZDD GLY A -18 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD SER A -17 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD SER A -16 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD HIS A -15 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD HIS A -14 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD HIS A -13 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD HIS A -12 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD HIS A -11 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD HIS A -10 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD SER A -9 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD SER A -8 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD GLY A -7 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD LEU A -6 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD VAL A -5 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD PRO A -4 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD ARG A -3 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD GLY A -2 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD SER A -1 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD HIS A 0 UNP Q05871 EXPRESSION TAG SEQADV 4ZDD ILE A 25 UNP Q05871 MET 25 CONFLICT SEQRES 1 A 300 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 300 LEU VAL PRO ARG GLY SER HIS MET SER GLN GLU ILE ARG SEQRES 3 A 300 GLN ASN GLU LYS ILE SER TYR ARG ILE GLU GLY PRO PHE SEQRES 4 A 300 PHE ILE ILE HIS LEU ILE ASN PRO ASP ASN LEU ASN ALA SEQRES 5 A 300 LEU GLU GLY GLU ASP TYR ILE TYR LEU GLY GLU LEU LEU SEQRES 6 A 300 GLU LEU ALA ASP ARG ASN ARG ASP VAL TYR PHE THR ILE SEQRES 7 A 300 ILE GLN SER SER GLY ARG PHE PHE SER SER GLY ALA ASP SEQRES 8 A 300 PHE LYS GLY ILE ALA LYS ALA GLN GLY ASP ASP THR ASN SEQRES 9 A 300 LYS TYR PRO SER GLU THR SER LYS TRP VAL SER ASN PHE SEQRES 10 A 300 VAL ALA ARG ASN VAL TYR VAL THR ASP ALA PHE ILE LYS SEQRES 11 A 300 HIS SER LYS VAL LEU ILE CYS CYS LEU ASN GLY PRO ALA SEQRES 12 A 300 ILE GLY LEU SER ALA ALA LEU VAL ALA LEU CYS ASP ILE SEQRES 13 A 300 VAL TYR SER ILE ASN ASP LYS VAL TYR LEU LEU TYR PRO SEQRES 14 A 300 PHE ALA ASN LEU GLY LEU ILE THR GLU GLY GLY THR THR SEQRES 15 A 300 VAL SER LEU PRO LEU LYS PHE GLY THR ASN THR THR TYR SEQRES 16 A 300 GLU CYS LEU MET PHE ASN LYS PRO PHE LYS TYR ASP ILE SEQRES 17 A 300 MET CYS GLU ASN GLY PHE ILE SER LYS ASN PHE ASN MET SEQRES 18 A 300 PRO SER SER ASN ALA GLU ALA PHE ASN ALA LYS VAL LEU SEQRES 19 A 300 GLU GLU LEU ARG GLU LYS VAL LYS GLY LEU TYR LEU PRO SEQRES 20 A 300 SER CYS LEU GLY MET LYS LYS LEU LEU LYS SER ASN HIS SEQRES 21 A 300 ILE ASP ALA PHE ASN LYS ALA ASN SER VAL GLU VAL ASN SEQRES 22 A 300 GLU SER LEU LYS TYR TRP VAL ASP GLY GLU PRO LEU LYS SEQRES 23 A 300 ARG PHE ARG GLN LEU GLY SER LYS GLN ARG LYS HIS ARG SEQRES 24 A 300 LEU HET SO4 A 300 5 HET SO4 A 301 5 HET SO4 A 302 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 3(O4 S 2-) FORMUL 5 HOH *9(H2 O) HELIX 1 AA1 ASN A 26 LEU A 30 5 5 HELIX 2 AA2 GLU A 34 ASN A 51 1 18 HELIX 3 AA3 TRP A 93 HIS A 111 1 19 HELIX 4 AA4 GLY A 125 ALA A 132 1 8 HELIX 5 AA5 PHE A 150 GLY A 154 5 5 HELIX 6 AA6 GLY A 160 GLY A 170 1 11 HELIX 7 AA7 GLY A 170 PHE A 180 1 11 HELIX 8 AA8 TYR A 186 ASN A 192 1 7 HELIX 9 AA9 ASN A 205 LYS A 222 1 18 HELIX 10 AB1 TYR A 225 ASN A 239 1 15 HELIX 11 AB2 HIS A 240 GLY A 262 1 23 HELIX 12 AB3 GLY A 262 ARG A 267 1 6 SHEET 1 AA1 6 ILE A 11 GLU A 16 0 SHEET 2 AA1 6 PHE A 19 LEU A 24 -1 O ILE A 21 N ARG A 14 SHEET 3 AA1 6 PHE A 56 GLN A 60 1 O GLN A 60 N ILE A 22 SHEET 4 AA1 6 VAL A 114 LEU A 119 1 O ILE A 116 N THR A 57 SHEET 5 AA1 6 ILE A 136 SER A 139 1 O TYR A 138 N LEU A 119 SHEET 6 AA1 6 LYS A 197 ASN A 198 1 O LYS A 197 N SER A 139 SHEET 1 AA2 3 ALA A 123 ILE A 124 0 SHEET 2 AA2 3 TYR A 145 LEU A 147 1 O TYR A 145 N ALA A 123 SHEET 3 AA2 3 PHE A 184 LYS A 185 -1 O PHE A 184 N LEU A 146 SITE 1 AC1 6 ALA A 70 PHE A 97 GLY A 125 LEU A 126 SITE 2 AC1 6 PHE A 150 GLU A 158 SITE 1 AC2 7 ARG A 64 ASN A 141 LYS A 143 PRO A 202 SITE 2 AC2 7 SER A 203 SER A 204 HOH A 405 SITE 1 AC3 1 ARG A 218 CRYST1 116.054 116.054 122.096 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008617 0.004975 0.000000 0.00000 SCALE2 0.000000 0.009950 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008190 0.00000