HEADER TRANSFERASE 17-APR-15 4ZDN TITLE STREPTOMYCES PLATENSIS ISOMIGRASTATIN KETOSYNTHASE DOMAIN MGSF KS4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AT-LESS POLYKETIDE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 550-1188; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES PLATENSIS SUBSP. ROSACEUS; SOURCE 3 ORGANISM_TAXID: 684832; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)MAGIC; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, NATPRO, MGSF, ENZYME DISCOVERY FOR NATURAL PRODUCT KEYWDS 3 BIOSYNTHESIS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,H.LI,M.ENDRES,C.A.BINGMAN,R.YENNAMALLI,J.R.LOHMAN,M.MA, AUTHOR 2 B.SHEN,G.N.PHILLIPS JR.,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 3 GENOMICS (MCSG),ENZYME DISCOVERY FOR NATURAL PRODUCT BIOSYNTHESIS AUTHOR 4 (NATPRO) REVDAT 3 22-MAR-23 4ZDN 1 AUTHOR REMARK REVDAT 2 02-NOV-16 4ZDN 1 TITLE AUTHOR REMARK REVDAT 1 13-MAY-15 4ZDN 0 SPRSDE 13-MAY-15 4ZDN 4TL2 JRNL AUTH J.R.LOHMAN,M.MA,J.OSIPIUK,B.NOCEK,Y.KIM,C.CHANG,M.CUFF, JRNL AUTH 2 J.MACK,L.BIGELOW,H.LI,M.ENDRES,G.BABNIGG,A.JOACHIMIAK, JRNL AUTH 3 G.N.PHILLIPS,B.SHEN JRNL TITL STRUCTURAL AND EVOLUTIONARY RELATIONSHIPS OF "AT-LESS" TYPE JRNL TITL 2 I POLYKETIDE SYNTHASE KETOSYNTHASES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 112 12693 2015 JRNL REFN ESSN 1091-6490 JRNL PMID 26420866 JRNL DOI 10.1073/PNAS.1515460112 REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.5 REMARK 3 NUMBER OF REFLECTIONS : 66176 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3306 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.5200 - 7.2229 0.99 2962 192 0.1542 0.1890 REMARK 3 2 7.2229 - 5.7382 1.00 3030 143 0.1652 0.1869 REMARK 3 3 5.7382 - 5.0144 1.00 3038 168 0.1562 0.1997 REMARK 3 4 5.0144 - 4.5566 0.99 3013 151 0.1280 0.1676 REMARK 3 5 4.5566 - 4.2304 1.00 3017 165 0.1222 0.1277 REMARK 3 6 4.2304 - 3.9812 0.99 3016 130 0.1334 0.1781 REMARK 3 7 3.9812 - 3.7820 0.99 3011 166 0.1434 0.1542 REMARK 3 8 3.7820 - 3.6174 0.99 3017 147 0.1653 0.2318 REMARK 3 9 3.6174 - 3.4783 0.99 3006 152 0.1815 0.2028 REMARK 3 10 3.4783 - 3.3583 0.99 2998 165 0.1964 0.2285 REMARK 3 11 3.3583 - 3.2533 1.00 3029 147 0.2219 0.2560 REMARK 3 12 3.2533 - 3.1604 0.99 3044 140 0.2294 0.2936 REMARK 3 13 3.1604 - 3.0772 0.99 2969 159 0.2404 0.3576 REMARK 3 14 3.0772 - 3.0021 0.99 3023 168 0.2601 0.3268 REMARK 3 15 3.0021 - 2.9339 0.99 3004 152 0.2675 0.3036 REMARK 3 16 2.9339 - 2.8715 0.97 2897 180 0.2806 0.3064 REMARK 3 17 2.8715 - 2.8141 0.90 2731 149 0.2877 0.3716 REMARK 3 18 2.8141 - 2.7610 0.84 2548 123 0.2870 0.3136 REMARK 3 19 2.7610 - 2.7117 0.72 2189 130 0.2893 0.3542 REMARK 3 20 2.7117 - 2.6657 0.61 1840 102 0.2904 0.2930 REMARK 3 21 2.6657 - 2.6227 0.53 1613 76 0.2762 0.3539 REMARK 3 22 2.6227 - 2.5824 0.47 1418 81 0.2724 0.3221 REMARK 3 23 2.5824 - 2.5444 0.43 1321 62 0.2606 0.3580 REMARK 3 24 2.5444 - 2.5086 0.38 1136 58 0.2621 0.2644 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4494 REMARK 3 ANGLE : 0.661 6137 REMARK 3 CHIRALITY : 0.025 665 REMARK 3 PLANARITY : 0.003 820 REMARK 3 DIHEDRAL : 10.718 1576 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 551 THROUGH 658 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.7731 10.7158 7.2303 REMARK 3 T TENSOR REMARK 3 T11: 0.1934 T22: 0.8591 REMARK 3 T33: 0.4180 T12: 0.0397 REMARK 3 T13: -0.0058 T23: -0.1652 REMARK 3 L TENSOR REMARK 3 L11: 2.1261 L22: 2.3194 REMARK 3 L33: 2.1805 L12: -0.3544 REMARK 3 L13: 0.6535 L23: -0.9211 REMARK 3 S TENSOR REMARK 3 S11: 0.0671 S12: 0.3157 S13: -0.3963 REMARK 3 S21: -0.2756 S22: -0.1193 S23: 0.4160 REMARK 3 S31: 0.2800 S32: -1.0513 S33: -0.0510 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 659 THROUGH 725 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.6673 18.4223 21.5879 REMARK 3 T TENSOR REMARK 3 T11: 0.4593 T22: 0.4577 REMARK 3 T33: 0.3257 T12: 0.1878 REMARK 3 T13: 0.0256 T23: -0.0638 REMARK 3 L TENSOR REMARK 3 L11: 1.9462 L22: 3.0409 REMARK 3 L33: 1.8085 L12: -1.4402 REMARK 3 L13: -0.1642 L23: -1.1556 REMARK 3 S TENSOR REMARK 3 S11: -0.2133 S12: 0.0971 S13: -0.3206 REMARK 3 S21: 0.5397 S22: 0.2593 S23: 0.2800 REMARK 3 S31: 0.0596 S32: -0.2238 S33: -0.0468 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 726 THROUGH 807 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.2726 22.8178 6.3264 REMARK 3 T TENSOR REMARK 3 T11: 0.3402 T22: 0.8617 REMARK 3 T33: 0.3052 T12: 0.2613 REMARK 3 T13: -0.0377 T23: -0.0470 REMARK 3 L TENSOR REMARK 3 L11: 0.9939 L22: 2.2447 REMARK 3 L33: 2.0518 L12: -1.1527 REMARK 3 L13: -0.5265 L23: -0.6488 REMARK 3 S TENSOR REMARK 3 S11: -0.1264 S12: 0.5444 S13: -0.0687 REMARK 3 S21: -0.1402 S22: 0.0688 S23: 0.3391 REMARK 3 S31: -0.2107 S32: -0.7644 S33: 0.0676 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 808 THROUGH 849 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.4651 35.5901 3.4902 REMARK 3 T TENSOR REMARK 3 T11: 0.5087 T22: 0.7010 REMARK 3 T33: 0.3163 T12: 0.4187 REMARK 3 T13: 0.0621 T23: 0.0801 REMARK 3 L TENSOR REMARK 3 L11: 5.5836 L22: 2.4974 REMARK 3 L33: 0.2656 L12: -1.8808 REMARK 3 L13: 0.5607 L23: -0.3739 REMARK 3 S TENSOR REMARK 3 S11: 0.1034 S12: 0.4020 S13: 0.5780 REMARK 3 S21: -0.1472 S22: -0.1204 S23: -0.0961 REMARK 3 S31: -0.5138 S32: -0.2207 S33: 0.0069 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 850 THROUGH 991 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.8345 27.9104 -6.3526 REMARK 3 T TENSOR REMARK 3 T11: 0.4053 T22: 0.9831 REMARK 3 T33: 0.2580 T12: 0.4369 REMARK 3 T13: 0.0171 T23: 0.0322 REMARK 3 L TENSOR REMARK 3 L11: 2.1062 L22: 2.4987 REMARK 3 L33: 2.1203 L12: -0.8120 REMARK 3 L13: 0.3062 L23: -0.1967 REMARK 3 S TENSOR REMARK 3 S11: -0.0569 S12: 0.9292 S13: 0.1230 REMARK 3 S21: -0.7004 S22: -0.0935 S23: -0.1571 REMARK 3 S31: -0.5074 S32: -0.3695 S33: -0.0939 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 992 THROUGH 1055 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.4973 5.7931 13.1953 REMARK 3 T TENSOR REMARK 3 T11: 0.1274 T22: 0.3465 REMARK 3 T33: 0.2167 T12: -0.0390 REMARK 3 T13: 0.0272 T23: 0.0514 REMARK 3 L TENSOR REMARK 3 L11: 2.1012 L22: 2.4842 REMARK 3 L33: 2.5446 L12: -1.0941 REMARK 3 L13: 0.3688 L23: 1.3706 REMARK 3 S TENSOR REMARK 3 S11: 0.1251 S12: 0.2099 S13: 0.0220 REMARK 3 S21: -0.2164 S22: -0.2125 S23: -0.1020 REMARK 3 S31: -0.2481 S32: 0.2236 S33: 0.0573 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1056 THROUGH 1132 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.5701 1.1271 24.6208 REMARK 3 T TENSOR REMARK 3 T11: 0.1409 T22: 0.2657 REMARK 3 T33: 0.3109 T12: -0.0043 REMARK 3 T13: 0.0188 T23: 0.0489 REMARK 3 L TENSOR REMARK 3 L11: 2.0123 L22: 0.1891 REMARK 3 L33: 3.7806 L12: -0.2274 REMARK 3 L13: -0.3881 L23: -0.7433 REMARK 3 S TENSOR REMARK 3 S11: -0.0155 S12: -0.0113 S13: 0.0211 REMARK 3 S21: -0.0121 S22: -0.1740 S23: -0.0886 REMARK 3 S31: -0.1026 S32: 0.6597 S33: 0.1154 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1133 THROUGH 1180 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.0498 6.6747 20.2203 REMARK 3 T TENSOR REMARK 3 T11: 0.1347 T22: 0.3510 REMARK 3 T33: 0.2092 T12: -0.0697 REMARK 3 T13: 0.0464 T23: 0.0573 REMARK 3 L TENSOR REMARK 3 L11: 4.2198 L22: 2.0129 REMARK 3 L33: 3.0761 L12: -1.5406 REMARK 3 L13: 0.6559 L23: -0.4210 REMARK 3 S TENSOR REMARK 3 S11: -0.0181 S12: 0.0955 S13: -0.0560 REMARK 3 S21: 0.1163 S22: -0.1911 S23: -0.1017 REMARK 3 S31: -0.2124 S32: 0.1049 S33: 0.0690 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZDN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-APR-15. REMARK 100 THE DEPOSITION ID IS D_1000209080. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97913 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40687 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.509 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.40 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.51 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.60 REMARK 200 R MERGE FOR SHELL (I) : 0.97300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.1M SODIUM MALONATE, 0.1M HEPES REMARK 280 PH7.0, 0.5% JEFFAMINE ED2001, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.84050 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 107.76075 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.92025 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 71.84050 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 35.92025 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 107.76075 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 35.92025 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 550 REMARK 465 THR A 692 REMARK 465 ASP A 693 REMARK 465 GLY A 694 REMARK 465 LEU A 695 REMARK 465 ALA A 885 REMARK 465 GLY A 886 REMARK 465 GLY A 887 REMARK 465 SER A 888 REMARK 465 SER A 1070 REMARK 465 ASP A 1071 REMARK 465 SER A 1072 REMARK 465 ASP A 1073 REMARK 465 SER A 1074 REMARK 465 ASP A 1075 REMARK 465 SER A 1076 REMARK 465 ASP A 1077 REMARK 465 SER A 1078 REMARK 465 ASP A 1079 REMARK 465 SER A 1080 REMARK 465 ASP A 1081 REMARK 465 SER A 1082 REMARK 465 ASP A 1083 REMARK 465 SER A 1084 REMARK 465 ASP A 1085 REMARK 465 SER A 1086 REMARK 465 ASP A 1087 REMARK 465 SER A 1088 REMARK 465 ASP A 1089 REMARK 465 SER A 1090 REMARK 465 GLY A 1091 REMARK 465 SER A 1092 REMARK 465 GLY A 1093 REMARK 465 SER A 1094 REMARK 465 GLU A 1095 REMARK 465 ALA A 1096 REMARK 465 GLU A 1097 REMARK 465 ALA A 1098 REMARK 465 ALA A 1156 REMARK 465 GLY A 1157 REMARK 465 ALA A 1158 REMARK 465 ASP A 1159 REMARK 465 ALA A 1181 REMARK 465 GLY A 1182 REMARK 465 SER A 1183 REMARK 465 GLU A 1184 REMARK 465 HIS A 1185 REMARK 465 PRO A 1186 REMARK 465 ALA A 1187 REMARK 465 THR A 1188 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 552 CG OD1 OD2 REMARK 470 ASP A 595 CG OD1 OD2 REMARK 470 GLU A 599 CG CD OE1 OE2 REMARK 470 GLN A 603 CG CD OE1 NE2 REMARK 470 ARG A 604 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 606 CG1 CG2 REMARK 470 GLN A 607 CG CD OE1 NE2 REMARK 470 GLN A 608 CG CD OE1 NE2 REMARK 470 ARG A 688 CG CD NE CZ NH1 NH2 REMARK 470 PRO A 690 CG CD REMARK 470 ARG A 770 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 826 CG CD NE CZ NH1 NH2 REMARK 470 SER A 852 OG REMARK 470 ARG A 867 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 868 CG CD1 CD2 REMARK 470 GLU A 931 CG CD OE1 OE2 REMARK 470 GLN A 932 CG CD OE1 NE2 REMARK 470 PHE A1178 CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1422 O HOH A 1422 6555 2.15 REMARK 500 O HOH A 1410 O HOH A 1410 5655 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 567 82.80 -155.71 REMARK 500 SER A 583 42.18 -100.99 REMARK 500 ALA A 610 -159.87 -116.48 REMARK 500 THR A 680 -20.61 -146.60 REMARK 500 MSE A 726 -122.74 59.87 REMARK 500 CYS A 778 79.75 -104.29 REMARK 500 ASP A 786 -89.24 -91.04 REMARK 500 GLU A 904 -98.62 44.32 REMARK 500 ALA A1172 56.55 -141.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC109613 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 4WKY RELATED DB: PDB REMARK 900 RELATED ID: 4QYR RELATED DB: PDB REMARK 900 RELATED ID: 4TKT RELATED DB: PDB REMARK 900 RELATED ID: 4OQJ RELATED DB: PDB REMARK 900 RELATED ID: 4OPE RELATED DB: PDB REMARK 900 RELATED ID: 4OPF RELATED DB: PDB DBREF 4ZDN A 550 1188 UNP D0U2E4 D0U2E4_STRPT 550 1188 SEQRES 1 A 639 ASP ALA ASP GLU PRO ILE ALA LEU ILE GLY LEU SER GLY SEQRES 2 A 639 ARG TYR PRO ASP ALA PRO THR LEU GLU ALA PHE TRP GLU SEQRES 3 A 639 ASN LEU ARG ALA GLY ARG GLU SER VAL ARG GLU VAL PRO SEQRES 4 A 639 ALA GLU ARG TRP PRO LEU ASP ALA PHE TYR GLU PRO ASP SEQRES 5 A 639 PRO GLN ARG ALA VAL GLN GLN GLY ALA SER TYR SER LYS SEQRES 6 A 639 TRP GLY ALA PHE LEU ASP ASP PHE ALA ARG PHE ASP ALA SEQRES 7 A 639 ALA PHE PHE GLY ILE ALA PRO ARG ASP ALA ALA ASP MSE SEQRES 8 A 639 ASP PRO GLN GLU ARG LEU PHE VAL GLU SER ALA TRP SER SEQRES 9 A 639 VAL LEU GLU ASP ALA GLY TYR THR ARG GLN ARG LEU ALA SEQRES 10 A 639 GLU GLN HIS ALA SER SER VAL GLY VAL PHE ALA GLY ILE SEQRES 11 A 639 THR LYS THR GLY PHE ASP ARG HIS ARG PRO PRO ALA THR SEQRES 12 A 639 ASP GLY LEU PRO PRO ALA PRO ARG THR SER PHE GLY SER SEQRES 13 A 639 LEU ALA ASN ARG VAL SER TYR LEU LEU ASP LEU HIS GLY SEQRES 14 A 639 PRO SER MSE PRO ILE ASP THR MSE CYS SER SER SER LEU SEQRES 15 A 639 THR ALA ILE HIS GLU ALA CYS GLU HIS LEU ARG HIS GLY SEQRES 16 A 639 ALA CYS GLU LEU ALA ILE ALA GLY GLY VAL ASN LEU TYR SEQRES 17 A 639 LEU HIS PRO SER SER TYR VAL GLU LEU CYS ARG SER ARG SEQRES 18 A 639 MSE LEU ALA THR ASP GLY HIS CYS ARG SER PHE GLY ALA SEQRES 19 A 639 GLY GLY ASP GLY PHE LEU PRO GLY GLU GLY VAL GLY ALA SEQRES 20 A 639 VAL LEU LEU LYS PRO LEU SER ALA ALA GLU ALA ASP GLY SEQRES 21 A 639 ASP PRO ILE HIS ALA VAL ILE VAL GLY SER ALA ILE ASN SEQRES 22 A 639 HIS GLY GLY ARG THR ASN GLY TYR THR VAL PRO ASN PRO SEQRES 23 A 639 ARG ALA GLN ALA ALA LEU ILE ARG ASP ALA LEU ASP ARG SEQRES 24 A 639 ALA GLY VAL SER ALA ALA GLY ILE GLY TYR ILE GLU ALA SEQRES 25 A 639 HIS GLY THR GLY THR ARG LEU GLY ASP PRO VAL GLU ILE SEQRES 26 A 639 ASP GLY LEU THR GLN ALA PHE ALA PRO ASP ALA GLY GLY SEQRES 27 A 639 SER GLY ALA CYS ALA LEU GLY SER VAL LYS SER ASN ILE SEQRES 28 A 639 GLY HIS LEU GLU ALA ALA ALA GLY ILE ALA GLY LEU THR SEQRES 29 A 639 LYS ALA VAL LEU GLN LEU GLN HIS GLY GLU PHE ALA PRO SEQRES 30 A 639 THR LEU HIS ALA GLU GLN THR ASN PRO ASP ILE ASP PHE SEQRES 31 A 639 ALA ALA THR PRO PHE THR LEU GLN THR GLY GLY ALA PRO SEQRES 32 A 639 TRP PRO ARG PRO ALA ASP GLY GLY PRO ARG ARG ALA GLY SEQRES 33 A 639 ILE SER SER PHE GLY ALA GLY GLY ALA ASN ALA HIS VAL SEQRES 34 A 639 ILE VAL ALA GLU TYR ARG SER ALA THR PRO ALA PRO ALA SEQRES 35 A 639 THR PRO ALA PRO SER ALA ARG PRO VAL LEU LEU PRO LEU SEQRES 36 A 639 SER ALA ARG THR THR GLU ASP LEU HIS ALA ARG ALA GLY SEQRES 37 A 639 GLN LEU SER ASP LEU LEU ARG ASN GLY ALA PRO VAL ASP SEQRES 38 A 639 LEU PRO ALA VAL ALA ALA THR LEU GLN THR GLY ARG GLU SEQRES 39 A 639 GLU MSE ALA GLU ARG VAL CYS PHE VAL ALA SER THR PRO SEQRES 40 A 639 GLY GLU TRP LEU ASP GLN LEU GLY ALA PHE LEU ALA ASP SEQRES 41 A 639 SER ASP SER ASP SER ASP SER ASP SER ASP SER ASP SER SEQRES 42 A 639 ASP SER ASP SER ASP SER ASP SER GLY SER GLY SER GLU SEQRES 43 A 639 ALA GLU ALA GLU VAL PRO TRP SER ARG GLY ARG VAL ARG SEQRES 44 A 639 ALA THR ARG GLU THR LEU ALA ALA LEU ALA GLU LYS ASP SEQRES 45 A 639 GLU LEU ARG ALA LEU VAL THR ARG TRP ILE ASN ARG GLY SEQRES 46 A 639 ASP TRP HIS ASP LEU ALA ALA PHE TRP ALA LYS GLY MSE SEQRES 47 A 639 PRO LEU ASP TRP THR ARG LEU HIS ALA GLY ALA ASP THR SEQRES 48 A 639 PRO ALA ARG VAL HIS LEU PRO ALA TYR PRO PHE ALA GLY SEQRES 49 A 639 ARG GLN PHE TRP PHE GLY PRO ALA GLY SER GLU HIS PRO SEQRES 50 A 639 ALA THR MODRES 4ZDN MSE A 640 MET MODIFIED RESIDUE MODRES 4ZDN MSE A 721 MET MODIFIED RESIDUE MODRES 4ZDN MSE A 726 MET MODIFIED RESIDUE MODRES 4ZDN MSE A 771 MET MODIFIED RESIDUE MODRES 4ZDN MSE A 1045 MET MODIFIED RESIDUE MODRES 4ZDN MSE A 1147 MET MODIFIED RESIDUE HET MSE A 640 8 HET MSE A 721 8 HET MSE A 726 8 HET MSE A 771 8 HET MSE A1045 8 HET MSE A1147 8 HET EPE A1201 15 HET CL A1202 1 HETNAM MSE SELENOMETHIONINE HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM CL CHLORIDE ION HETSYN EPE HEPES FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 2 EPE C8 H18 N2 O4 S FORMUL 3 CL CL 1- FORMUL 4 HOH *126(H2 O) HELIX 1 AA1 THR A 569 ALA A 579 1 11 HELIX 2 AA2 ASP A 601 GLN A 607 1 7 HELIX 3 AA3 ALA A 627 GLY A 631 5 5 HELIX 4 AA4 ALA A 633 MSE A 640 1 8 HELIX 5 AA5 ASP A 641 GLY A 659 1 19 HELIX 6 AA6 THR A 661 ALA A 670 1 10 HELIX 7 AA7 GLY A 683 HIS A 687 5 5 HELIX 8 AA8 SER A 702 LEU A 714 1 13 HELIX 9 AA9 THR A 725 CYS A 727 5 3 HELIX 10 AB1 SER A 728 HIS A 743 1 16 HELIX 11 AB2 PRO A 760 SER A 769 1 10 HELIX 12 AB3 LEU A 802 ASP A 808 1 7 HELIX 13 AB4 ASN A 834 GLY A 850 1 17 HELIX 14 AB5 SER A 852 ILE A 856 5 5 HELIX 15 AB6 LEU A 868 ALA A 882 1 15 HELIX 16 AB7 VAL A 896 GLY A 901 1 6 HELIX 17 AB8 LEU A 903 ALA A 905 5 3 HELIX 18 AB9 ALA A 906 GLY A 922 1 17 HELIX 19 AC1 ASP A 938 THR A 942 5 5 HELIX 20 AC2 THR A 1008 ASN A 1025 1 18 HELIX 21 AC3 ASP A 1030 GLY A 1041 1 12 HELIX 22 AC4 THR A 1055 ALA A 1068 1 14 HELIX 23 AC5 THR A 1110 GLU A 1119 1 10 HELIX 24 AC6 LYS A 1120 GLY A 1134 1 15 HELIX 25 AC7 ASP A 1135 LYS A 1145 1 11 HELIX 26 AC8 ASP A 1150 HIS A 1155 5 6 SHEET 1 AA111 SER A 720 ILE A 723 0 SHEET 2 AA111 VAL A 673 GLY A 678 1 N ALA A 677 O ILE A 723 SHEET 3 AA111 LEU A 748 ASN A 755 1 O ILE A 750 N GLY A 674 SHEET 4 AA111 GLY A 793 PRO A 801 -1 O LEU A 799 N ALA A 749 SHEET 5 AA111 ILE A 555 ARG A 563 -1 N ARG A 563 O VAL A 794 SHEET 6 AA111 ALA A 814 HIS A 823 -1 O ALA A 814 N LEU A 557 SHEET 7 AA111 ALA A 974 ALA A 981 -1 O ILE A 979 N GLY A 818 SHEET 8 AA111 ARG A 963 PHE A 969 -1 N ALA A 964 O VAL A 980 SHEET 9 AA111 TYR A 858 GLU A 860 1 N GLU A 860 O GLY A 965 SHEET 10 AA111 CYS A 891 GLY A 894 1 O ALA A 892 N ILE A 859 SHEET 11 AA111 PHE A 944 LEU A 946 1 O THR A 945 N CYS A 891 SHEET 1 AA2 2 ARG A 585 GLU A 586 0 SHEET 2 AA2 2 TRP A 615 GLY A 616 -1 O GLY A 616 N ARG A 585 SHEET 1 AA3 2 ARG A 624 PHE A 625 0 SHEET 2 AA3 2 ARG A1174 GLN A1175 -1 O ARG A1174 N PHE A 625 SHEET 1 AA4 2 GLU A 923 PHE A 924 0 SHEET 2 AA4 2 ALA A 951 PRO A 952 -1 O ALA A 951 N PHE A 924 SHEET 1 AA5 3 VAL A1000 ALA A1006 0 SHEET 2 AA5 3 GLU A1047 ALA A1053 -1 O PHE A1051 N LEU A1002 SHEET 3 AA5 3 SER A1103 ARG A1106 -1 O GLY A1105 N ARG A1048 LINK C ASP A 639 N MSE A 640 1555 1555 1.33 LINK C MSE A 640 N ASP A 641 1555 1555 1.33 LINK C SER A 720 N MSE A 721 1555 1555 1.33 LINK C MSE A 721 N PRO A 722 1555 1555 1.34 LINK C THR A 725 N MSE A 726 1555 1555 1.33 LINK C MSE A 726 N CYS A 727 1555 1555 1.33 LINK C ARG A 770 N MSE A 771 1555 1555 1.33 LINK C MSE A 771 N LEU A 772 1555 1555 1.33 LINK C GLU A1044 N MSE A1045 1555 1555 1.33 LINK C MSE A1045 N ALA A1046 1555 1555 1.33 LINK C GLY A1146 N MSE A1147 1555 1555 1.33 LINK C MSE A1147 N PRO A1148 1555 1555 1.34 CISPEP 1 THR A 992 PRO A 993 0 -3.43 SITE 1 AC1 7 PHE A 629 PHE A 630 TRP A 652 ARG A 662 SITE 2 AC1 7 ARG A1007 MSE A1045 ALA A1046 SITE 1 AC2 2 HIS A1013 ARG A1104 CRYST1 126.685 126.685 143.681 90.00 90.00 90.00 P 43 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007894 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007894 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006960 0.00000