data_4ZGM # _entry.id 4ZGM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4ZGM pdb_00004zgm 10.2210/pdb4zgm/pdb WWPDB D_1000209063 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-09-09 2 'Structure model' 1 1 2015-09-23 3 'Structure model' 1 2 2015-10-07 4 'Structure model' 1 3 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4ZGM _pdbx_database_status.recvd_initial_deposition_date 2015-04-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details 'Same receptor in complex with a different peptide ligand' _pdbx_database_related.db_id 3IOL _pdbx_database_related.content_type unspecified # _audit_author.name 'Reedtz-Runge, S.' _audit_author.pdbx_ordinal 1 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 58 _citation.language ? _citation.page_first 7370 _citation.page_last 7380 _citation.title 'Discovery of the Once-Weekly Glucagon-Like Peptide-1 (GLP-1) Analogue Semaglutide.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.5b00726 _citation.pdbx_database_id_PubMed 26308095 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lau, J.' 1 ? primary 'Bloch, P.' 2 ? primary 'Schaffer, L.' 3 ? primary 'Pettersson, I.' 4 ? primary 'Spetzler, J.' 5 ? primary 'Kofoed, J.' 6 ? primary 'Madsen, K.' 7 ? primary 'Knudsen, L.B.' 8 ? primary 'McGuire, J.' 9 ? primary 'Steensgaard, D.B.' 10 ? primary 'Strauss, H.M.' 11 ? primary 'Gram, D.X.' 12 ? primary 'Knudsen, S.M.' 13 ? primary 'Nielsen, F.S.' 14 ? primary 'Thygesen, P.' 15 ? primary 'Reedtz-Runge, S.' 16 ? primary 'Kruse, T.' 17 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Glucagon-like peptide 1 receptor' 14325.841 1 ? ? ? ? 2 polymer syn 'Semaglutide peptide backbone; 8Aib,34R-GLP-1(7-37)-OH' 3401.740 1 ? ? ? ? 3 non-polymer syn 3,6,9,12,15,18-hexaoxahexacosan-1-ol 394.543 2 ? ? ? ? 4 water nat water 18.015 88 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name GLP-1R # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;RPQGATVSLWETVQKWREYRRQCQRSLTEDPPPATDLFCNRTFDEYACWPDGEPGSFVNVSCPWYLPWASSVPQGHVYRF CTAEGLWLQKDNSSLPWRDLSECEESKRGERSSPEEQLLFLY ; ;RPQGATVSLWETVQKWREYRRQCQRSLTEDPPPATDLFCNRTFDEYACWPDGEPGSFVNVSCPWYLPWASSVPQGHVYRF CTAEGLWLQKDNSSLPWRDLSECEESKRGERSSPEEQLLFLY ; A ? 2 'polypeptide(L)' no yes 'H(AIB)EGTFTSDVSSYLEGQAAKEFIAWLVRGRG' HAEGTFTSDVSSYLEGQAAKEFIAWLVRGRG B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 3,6,9,12,15,18-hexaoxahexacosan-1-ol 32M 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 PRO n 1 3 GLN n 1 4 GLY n 1 5 ALA n 1 6 THR n 1 7 VAL n 1 8 SER n 1 9 LEU n 1 10 TRP n 1 11 GLU n 1 12 THR n 1 13 VAL n 1 14 GLN n 1 15 LYS n 1 16 TRP n 1 17 ARG n 1 18 GLU n 1 19 TYR n 1 20 ARG n 1 21 ARG n 1 22 GLN n 1 23 CYS n 1 24 GLN n 1 25 ARG n 1 26 SER n 1 27 LEU n 1 28 THR n 1 29 GLU n 1 30 ASP n 1 31 PRO n 1 32 PRO n 1 33 PRO n 1 34 ALA n 1 35 THR n 1 36 ASP n 1 37 LEU n 1 38 PHE n 1 39 CYS n 1 40 ASN n 1 41 ARG n 1 42 THR n 1 43 PHE n 1 44 ASP n 1 45 GLU n 1 46 TYR n 1 47 ALA n 1 48 CYS n 1 49 TRP n 1 50 PRO n 1 51 ASP n 1 52 GLY n 1 53 GLU n 1 54 PRO n 1 55 GLY n 1 56 SER n 1 57 PHE n 1 58 VAL n 1 59 ASN n 1 60 VAL n 1 61 SER n 1 62 CYS n 1 63 PRO n 1 64 TRP n 1 65 TYR n 1 66 LEU n 1 67 PRO n 1 68 TRP n 1 69 ALA n 1 70 SER n 1 71 SER n 1 72 VAL n 1 73 PRO n 1 74 GLN n 1 75 GLY n 1 76 HIS n 1 77 VAL n 1 78 TYR n 1 79 ARG n 1 80 PHE n 1 81 CYS n 1 82 THR n 1 83 ALA n 1 84 GLU n 1 85 GLY n 1 86 LEU n 1 87 TRP n 1 88 LEU n 1 89 GLN n 1 90 LYS n 1 91 ASP n 1 92 ASN n 1 93 SER n 1 94 SER n 1 95 LEU n 1 96 PRO n 1 97 TRP n 1 98 ARG n 1 99 ASP n 1 100 LEU n 1 101 SER n 1 102 GLU n 1 103 CYS n 1 104 GLU n 1 105 GLU n 1 106 SER n 1 107 LYS n 1 108 ARG n 1 109 GLY n 1 110 GLU n 1 111 ARG n 1 112 SER n 1 113 SER n 1 114 PRO n 1 115 GLU n 1 116 GLU n 1 117 GLN n 1 118 LEU n 1 119 LEU n 1 120 PHE n 1 121 LEU n 1 122 TYR n 2 1 HIS n 2 2 AIB n 2 3 GLU n 2 4 GLY n 2 5 THR n 2 6 PHE n 2 7 THR n 2 8 SER n 2 9 ASP n 2 10 VAL n 2 11 SER n 2 12 SER n 2 13 TYR n 2 14 LEU n 2 15 GLU n 2 16 GLY n 2 17 GLN n 2 18 ALA n 2 19 ALA n 2 20 LYS n 2 21 GLU n 2 22 PHE n 2 23 ILE n 2 24 ALA n 2 25 TRP n 2 26 LEU n 2 27 VAL n 2 28 ARG n 2 29 GLY n 2 30 ARG n 2 31 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 122 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene GLP1R _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 31 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 32M non-polymer . 3,6,9,12,15,18-hexaoxahexacosan-1-ol 'HEXAETHYLENE GLYCOL MONOOCTYL ETHER' 'C20 H42 O7' 394.543 AIB 'L-peptide linking' n 'ALPHA-AMINOISOBUTYRIC ACID' ? 'C4 H9 N O2' 103.120 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 24 ? ? ? A . n A 1 2 PRO 2 25 ? ? ? A . n A 1 3 GLN 3 26 ? ? ? A . n A 1 4 GLY 4 27 ? ? ? A . n A 1 5 ALA 5 28 ? ? ? A . n A 1 6 THR 6 29 29 THR THR A . n A 1 7 VAL 7 30 30 VAL VAL A . n A 1 8 SER 8 31 31 SER SER A . n A 1 9 LEU 9 32 32 LEU LEU A . n A 1 10 TRP 10 33 33 TRP TRP A . n A 1 11 GLU 11 34 34 GLU GLU A . n A 1 12 THR 12 35 35 THR THR A . n A 1 13 VAL 13 36 36 VAL VAL A . n A 1 14 GLN 14 37 37 GLN GLN A . n A 1 15 LYS 15 38 38 LYS LYS A . n A 1 16 TRP 16 39 39 TRP TRP A . n A 1 17 ARG 17 40 40 ARG ARG A . n A 1 18 GLU 18 41 41 GLU GLU A . n A 1 19 TYR 19 42 42 TYR TYR A . n A 1 20 ARG 20 43 43 ARG ARG A . n A 1 21 ARG 21 44 44 ARG ARG A . n A 1 22 GLN 22 45 45 GLN GLN A . n A 1 23 CYS 23 46 46 CYS CYS A . n A 1 24 GLN 24 47 47 GLN GLN A . n A 1 25 ARG 25 48 48 ARG ARG A . n A 1 26 SER 26 49 49 SER SER A . n A 1 27 LEU 27 50 50 LEU LEU A . n A 1 28 THR 28 51 51 THR THR A . n A 1 29 GLU 29 52 52 GLU GLU A . n A 1 30 ASP 30 53 53 ASP ASP A . n A 1 31 PRO 31 54 54 PRO PRO A . n A 1 32 PRO 32 55 55 PRO PRO A . n A 1 33 PRO 33 56 56 PRO PRO A . n A 1 34 ALA 34 57 57 ALA ALA A . n A 1 35 THR 35 58 58 THR THR A . n A 1 36 ASP 36 59 59 ASP ASP A . n A 1 37 LEU 37 60 60 LEU LEU A . n A 1 38 PHE 38 61 61 PHE PHE A . n A 1 39 CYS 39 62 62 CYS CYS A . n A 1 40 ASN 40 63 63 ASN ASN A . n A 1 41 ARG 41 64 64 ARG ARG A . n A 1 42 THR 42 65 65 THR THR A . n A 1 43 PHE 43 66 66 PHE PHE A . n A 1 44 ASP 44 67 67 ASP ASP A . n A 1 45 GLU 45 68 68 GLU GLU A . n A 1 46 TYR 46 69 69 TYR TYR A . n A 1 47 ALA 47 70 70 ALA ALA A . n A 1 48 CYS 48 71 71 CYS CYS A . n A 1 49 TRP 49 72 72 TRP TRP A . n A 1 50 PRO 50 73 73 PRO PRO A . n A 1 51 ASP 51 74 74 ASP ASP A . n A 1 52 GLY 52 75 75 GLY GLY A . n A 1 53 GLU 53 76 76 GLU GLU A . n A 1 54 PRO 54 77 77 PRO PRO A . n A 1 55 GLY 55 78 78 GLY GLY A . n A 1 56 SER 56 79 79 SER SER A . n A 1 57 PHE 57 80 80 PHE PHE A . n A 1 58 VAL 58 81 81 VAL VAL A . n A 1 59 ASN 59 82 82 ASN ASN A . n A 1 60 VAL 60 83 83 VAL VAL A . n A 1 61 SER 61 84 84 SER SER A . n A 1 62 CYS 62 85 85 CYS CYS A . n A 1 63 PRO 63 86 86 PRO PRO A . n A 1 64 TRP 64 87 87 TRP TRP A . n A 1 65 TYR 65 88 88 TYR TYR A . n A 1 66 LEU 66 89 89 LEU LEU A . n A 1 67 PRO 67 90 90 PRO PRO A . n A 1 68 TRP 68 91 91 TRP TRP A . n A 1 69 ALA 69 92 92 ALA ALA A . n A 1 70 SER 70 93 93 SER SER A . n A 1 71 SER 71 94 94 SER SER A . n A 1 72 VAL 72 95 95 VAL VAL A . n A 1 73 PRO 73 96 96 PRO PRO A . n A 1 74 GLN 74 97 97 GLN GLN A . n A 1 75 GLY 75 98 98 GLY GLY A . n A 1 76 HIS 76 99 99 HIS HIS A . n A 1 77 VAL 77 100 100 VAL VAL A . n A 1 78 TYR 78 101 101 TYR TYR A . n A 1 79 ARG 79 102 102 ARG ARG A . n A 1 80 PHE 80 103 103 PHE PHE A . n A 1 81 CYS 81 104 104 CYS CYS A . n A 1 82 THR 82 105 105 THR THR A . n A 1 83 ALA 83 106 106 ALA ALA A . n A 1 84 GLU 84 107 107 GLU GLU A . n A 1 85 GLY 85 108 108 GLY GLY A . n A 1 86 LEU 86 109 109 LEU LEU A . n A 1 87 TRP 87 110 110 TRP TRP A . n A 1 88 LEU 88 111 111 LEU LEU A . n A 1 89 GLN 89 112 112 GLN GLN A . n A 1 90 LYS 90 113 113 LYS LYS A . n A 1 91 ASP 91 114 114 ASP ASP A . n A 1 92 ASN 92 115 115 ASN ASN A . n A 1 93 SER 93 116 116 SER SER A . n A 1 94 SER 94 117 117 SER SER A . n A 1 95 LEU 95 118 118 LEU LEU A . n A 1 96 PRO 96 119 119 PRO PRO A . n A 1 97 TRP 97 120 120 TRP TRP A . n A 1 98 ARG 98 121 121 ARG ARG A . n A 1 99 ASP 99 122 122 ASP ASP A . n A 1 100 LEU 100 123 123 LEU LEU A . n A 1 101 SER 101 124 124 SER SER A . n A 1 102 GLU 102 125 125 GLU GLU A . n A 1 103 CYS 103 126 126 CYS CYS A . n A 1 104 GLU 104 127 127 GLU GLU A . n A 1 105 GLU 105 128 128 GLU GLU A . n A 1 106 SER 106 129 ? ? ? A . n A 1 107 LYS 107 130 ? ? ? A . n A 1 108 ARG 108 131 ? ? ? A . n A 1 109 GLY 109 132 ? ? ? A . n A 1 110 GLU 110 133 ? ? ? A . n A 1 111 ARG 111 134 ? ? ? A . n A 1 112 SER 112 135 ? ? ? A . n A 1 113 SER 113 136 ? ? ? A . n A 1 114 PRO 114 137 ? ? ? A . n A 1 115 GLU 115 138 ? ? ? A . n A 1 116 GLU 116 139 ? ? ? A . n A 1 117 GLN 117 140 ? ? ? A . n A 1 118 LEU 118 141 ? ? ? A . n A 1 119 LEU 119 142 ? ? ? A . n A 1 120 PHE 120 143 ? ? ? A . n A 1 121 LEU 121 144 ? ? ? A . n A 1 122 TYR 122 145 ? ? ? A . n B 2 1 HIS 1 7 ? ? ? B . n B 2 2 AIB 2 8 ? ? ? B . n B 2 3 GLU 3 9 ? ? ? B . n B 2 4 GLY 4 10 10 GLY GLY B . n B 2 5 THR 5 11 11 THR THR B . n B 2 6 PHE 6 12 12 PHE PHE B . n B 2 7 THR 7 13 13 THR THR B . n B 2 8 SER 8 14 14 SER SER B . n B 2 9 ASP 9 15 15 ASP ASP B . n B 2 10 VAL 10 16 16 VAL VAL B . n B 2 11 SER 11 17 17 SER SER B . n B 2 12 SER 12 18 18 SER SER B . n B 2 13 TYR 13 19 19 TYR TYR B . n B 2 14 LEU 14 20 20 LEU LEU B . n B 2 15 GLU 15 21 21 GLU GLU B . n B 2 16 GLY 16 22 22 GLY GLY B . n B 2 17 GLN 17 23 23 GLN GLN B . n B 2 18 ALA 18 24 24 ALA ALA B . n B 2 19 ALA 19 25 25 ALA ALA B . n B 2 20 LYS 20 26 26 LYS LYS B . n B 2 21 GLU 21 27 27 GLU GLU B . n B 2 22 PHE 22 28 28 PHE PHE B . n B 2 23 ILE 23 29 29 ILE ILE B . n B 2 24 ALA 24 30 30 ALA ALA B . n B 2 25 TRP 25 31 31 TRP TRP B . n B 2 26 LEU 26 32 32 LEU LEU B . n B 2 27 VAL 27 33 33 VAL VAL B . n B 2 28 ARG 28 34 34 ARG ARG B . n B 2 29 GLY 29 35 35 GLY GLY B . n B 2 30 ARG 30 36 36 ARG ARG B . n B 2 31 GLY 31 37 37 GLY GLY B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 32M 1 201 1 32M DET A . D 3 32M 1 101 2 32M DET B . E 4 HOH 1 301 89 HOH HOH A . E 4 HOH 2 302 64 HOH HOH A . E 4 HOH 3 303 80 HOH HOH A . E 4 HOH 4 304 65 HOH HOH A . E 4 HOH 5 305 14 HOH HOH A . E 4 HOH 6 306 31 HOH HOH A . E 4 HOH 7 307 75 HOH HOH A . E 4 HOH 8 308 58 HOH HOH A . E 4 HOH 9 309 77 HOH HOH A . E 4 HOH 10 310 9 HOH HOH A . E 4 HOH 11 311 44 HOH HOH A . E 4 HOH 12 312 37 HOH HOH A . E 4 HOH 13 313 68 HOH HOH A . E 4 HOH 14 314 48 HOH HOH A . E 4 HOH 15 315 28 HOH HOH A . E 4 HOH 16 316 76 HOH HOH A . E 4 HOH 17 317 11 HOH HOH A . E 4 HOH 18 318 25 HOH HOH A . E 4 HOH 19 319 1 HOH HOH A . E 4 HOH 20 320 4 HOH HOH A . E 4 HOH 21 321 7 HOH HOH A . E 4 HOH 22 322 79 HOH HOH A . E 4 HOH 23 323 30 HOH HOH A . E 4 HOH 24 324 66 HOH HOH A . E 4 HOH 25 325 18 HOH HOH A . E 4 HOH 26 326 16 HOH HOH A . E 4 HOH 27 327 2 HOH HOH A . E 4 HOH 28 328 42 HOH HOH A . E 4 HOH 29 329 35 HOH HOH A . E 4 HOH 30 330 56 HOH HOH A . E 4 HOH 31 331 70 HOH HOH A . E 4 HOH 32 332 20 HOH HOH A . E 4 HOH 33 333 59 HOH HOH A . E 4 HOH 34 334 92 HOH HOH A . E 4 HOH 35 335 26 HOH HOH A . E 4 HOH 36 336 10 HOH HOH A . E 4 HOH 37 337 23 HOH HOH A . E 4 HOH 38 338 12 HOH HOH A . E 4 HOH 39 339 74 HOH HOH A . E 4 HOH 40 340 5 HOH HOH A . E 4 HOH 41 341 39 HOH HOH A . E 4 HOH 42 342 62 HOH HOH A . E 4 HOH 43 343 90 HOH HOH A . E 4 HOH 44 344 29 HOH HOH A . E 4 HOH 45 345 34 HOH HOH A . E 4 HOH 46 346 78 HOH HOH A . E 4 HOH 47 347 15 HOH HOH A . E 4 HOH 48 348 19 HOH HOH A . E 4 HOH 49 349 63 HOH HOH A . E 4 HOH 50 350 67 HOH HOH A . E 4 HOH 51 351 45 HOH HOH A . E 4 HOH 52 352 3 HOH HOH A . E 4 HOH 53 353 24 HOH HOH A . E 4 HOH 54 354 22 HOH HOH A . E 4 HOH 55 355 13 HOH HOH A . E 4 HOH 56 356 17 HOH HOH A . E 4 HOH 57 357 43 HOH HOH A . E 4 HOH 58 358 54 HOH HOH A . E 4 HOH 59 359 83 HOH HOH A . E 4 HOH 60 360 69 HOH HOH A . E 4 HOH 61 361 33 HOH HOH A . E 4 HOH 62 362 8 HOH HOH A . E 4 HOH 63 363 72 HOH HOH A . E 4 HOH 64 364 53 HOH HOH A . E 4 HOH 65 365 73 HOH HOH A . E 4 HOH 66 366 46 HOH HOH A . E 4 HOH 67 367 91 HOH HOH A . E 4 HOH 68 368 86 HOH HOH A . E 4 HOH 69 369 71 HOH HOH A . E 4 HOH 70 370 82 HOH HOH A . E 4 HOH 71 371 81 HOH HOH A . E 4 HOH 72 372 84 HOH HOH A . E 4 HOH 73 373 93 HOH HOH A . E 4 HOH 74 374 57 HOH HOH A . E 4 HOH 75 375 40 HOH HOH A . F 4 HOH 1 201 87 HOH HOH B . F 4 HOH 2 202 60 HOH HOH B . F 4 HOH 3 203 50 HOH HOH B . F 4 HOH 4 204 6 HOH HOH B . F 4 HOH 5 205 38 HOH HOH B . F 4 HOH 6 206 41 HOH HOH B . F 4 HOH 7 207 36 HOH HOH B . F 4 HOH 8 208 55 HOH HOH B . F 4 HOH 9 209 51 HOH HOH B . F 4 HOH 10 210 61 HOH HOH B . F 4 HOH 11 211 88 HOH HOH B . F 4 HOH 12 212 27 HOH HOH B . F 4 HOH 13 213 52 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? dev_1938 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 4ZGM _cell.details ? _cell.formula_units_Z ? _cell.length_a 95.610 _cell.length_a_esd ? _cell.length_b 35.790 _cell.length_b_esd ? _cell.length_c 42.680 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZGM _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4ZGM _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.06 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 40.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.24 M Sodium malonate pH 7.0, 20% (w/v) PEG3350 (JCSG screen QIAGEN) and 10 mM hexaethylene glycol monooctyl ether (Detergent Screen HT Hampton Research). ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-01-09 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type OTHER _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54178 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4ZGM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.8 _reflns.d_resolution_low 28.65 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 14204 _reflns.number_obs 14102 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.7 _reflns.pdbx_Rmerge_I_obs 0.049 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 27.45 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.Rmerge_I_obs 0.43 _reflns_shell.d_res_high 1.8 _reflns_shell.d_res_low 1.9 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_sigI_obs 5.5 _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_gt ? _reflns_shell.number_measured_obs 17121 _reflns_shell.number_possible ? _reflns_shell.number_unique_all 2028 _reflns_shell.number_unique_gt ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_rejects ? _reflns_shell.percent_possible_all 97.9 _reflns_shell.percent_possible_gt ? _reflns_shell.percent_possible_obs ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4ZGM _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.800 _refine.ls_d_res_low 28.650 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14072 _refine.ls_number_reflns_R_free 705 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.22 _refine.ls_percent_reflns_R_free 5.01 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1644 _refine.ls_R_factor_R_free 0.1928 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1629 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3IOL _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 19.35 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.15 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1046 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 54 _refine_hist.number_atoms_solvent 88 _refine_hist.number_atoms_total 1188 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 28.650 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 ? 1144 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.346 ? 1545 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 15.983 ? 437 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.051 ? 149 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 194 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.8001 1.9390 . . 136 2574 98.00 . . . 0.2326 . 0.1827 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9390 2.1341 . . 139 2634 99.00 . . . 0.1949 . 0.1545 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1341 2.4428 . . 139 2628 100.00 . . . 0.1849 . 0.1525 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4428 3.0771 . . 141 2704 100.00 . . . 0.2115 . 0.1704 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0771 28.6539 . . 150 2827 100.00 . . . 0.1803 . 0.1617 . . . . . . . . . . # _struct.entry_id 4ZGM _struct.title 'Crystal structure of Semaglutide peptide backbone in complex with the GLP-1 receptor extracellular domain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4ZGM _struct_keywords.text 'GLP-1, receptor, complex, signaling protein' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP GLP1R_HUMAN P43220 ? 1 ;RPQGATVSLWETVQKWREYRRQCQRSLTEDPPPATDLFCNRTFDEYACWPDGEPGSFVNVSCPWYLPWASSVPQGHVYRF CTAEGLWLQKDNSSLPWRDLSECEESKRGERSSPEEQLLFLY ; 24 2 PDB 4ZGM 4ZGM ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4ZGM A 1 ? 122 ? P43220 24 ? 145 ? 24 145 2 2 4ZGM B 1 ? 31 ? 4ZGM 7 ? 37 ? 7 37 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1280 ? 1 MORE -10 ? 1 'SSA (A^2)' 8850 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 8 ? ASP A 30 ? SER A 31 ASP A 53 1 ? 23 HELX_P HELX_P2 AA2 TRP A 68 ? VAL A 72 ? TRP A 91 VAL A 95 5 ? 5 HELX_P HELX_P3 AA3 LEU A 100 ? GLU A 104 ? LEU A 123 GLU A 127 5 ? 5 HELX_P HELX_P4 AA4 PHE B 6 ? ARG B 28 ? PHE B 12 ARG B 34 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 48 SG ? ? A CYS 46 A CYS 71 1_555 ? ? ? ? ? ? ? 2.113 ? ? disulf2 disulf ? ? A CYS 39 SG ? ? ? 1_555 A CYS 81 SG ? ? A CYS 62 A CYS 104 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf3 disulf ? ? A CYS 62 SG ? ? ? 1_555 A CYS 103 SG ? ? A CYS 85 A CYS 126 1_555 ? ? ? ? ? ? ? 2.011 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 42 ? PHE A 43 ? THR A 65 PHE A 66 AA1 2 CYS A 48 ? TRP A 49 ? CYS A 71 TRP A 72 AA2 1 SER A 56 ? SER A 61 ? SER A 79 SER A 84 AA2 2 HIS A 76 ? CYS A 81 ? HIS A 99 CYS A 104 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 42 ? N THR A 65 O TRP A 49 ? O TRP A 72 AA2 1 2 N SER A 56 ? N SER A 79 O CYS A 81 ? O CYS A 104 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 32M 201 ? 1 'binding site for residue 32M A 201' AC2 Software B 32M 101 ? 3 'binding site for residue 32M B 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 HOH E . ? HOH A 302 . ? 1_555 ? 2 AC2 3 LEU B 14 ? LEU B 20 . ? 1_555 ? 3 AC2 3 ALA B 18 ? ALA B 24 . ? 1_555 ? 4 AC2 3 ARG B 30 ? ARG B 36 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 349 ? ? O A HOH 354 ? ? 2.05 2 1 OE2 A GLU 34 ? ? O A HOH 301 ? ? 2.16 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLU _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 68 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 86.92 _pdbx_validate_torsion.psi -18.84 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 24 ? A ARG 1 2 1 Y 1 A PRO 25 ? A PRO 2 3 1 Y 1 A GLN 26 ? A GLN 3 4 1 Y 1 A GLY 27 ? A GLY 4 5 1 Y 1 A ALA 28 ? A ALA 5 6 1 Y 1 A SER 129 ? A SER 106 7 1 Y 1 A LYS 130 ? A LYS 107 8 1 Y 1 A ARG 131 ? A ARG 108 9 1 Y 1 A GLY 132 ? A GLY 109 10 1 Y 1 A GLU 133 ? A GLU 110 11 1 Y 1 A ARG 134 ? A ARG 111 12 1 Y 1 A SER 135 ? A SER 112 13 1 Y 1 A SER 136 ? A SER 113 14 1 Y 1 A PRO 137 ? A PRO 114 15 1 Y 1 A GLU 138 ? A GLU 115 16 1 Y 1 A GLU 139 ? A GLU 116 17 1 Y 1 A GLN 140 ? A GLN 117 18 1 Y 1 A LEU 141 ? A LEU 118 19 1 Y 1 A LEU 142 ? A LEU 119 20 1 Y 1 A PHE 143 ? A PHE 120 21 1 Y 1 A LEU 144 ? A LEU 121 22 1 Y 1 A TYR 145 ? A TYR 122 23 1 Y 1 B HIS 7 ? B HIS 1 24 1 Y 1 B AIB 8 ? B AIB 2 25 1 Y 1 B GLU 9 ? B GLU 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 32M CAA C N N 1 32M CAC C N N 2 32M CAE C N N 3 32M CAF C N N 4 32M CAG C N N 5 32M CAH C N N 6 32M CAI C N N 7 32M CAK C N N 8 32M OAW O N N 9 32M CAM C N N 10 32M CAO C N N 11 32M OAY O N N 12 32M CAQ C N N 13 32M CAS C N N 14 32M OBA O N N 15 32M CAU C N N 16 32M CAT C N N 17 32M OAZ O N N 18 32M CAR C N N 19 32M CAP C N N 20 32M OAX O N N 21 32M CAN C N N 22 32M CAL C N N 23 32M OAV O N N 24 32M CAJ C N N 25 32M CAD C N N 26 32M OAB O N N 27 32M H1 H N N 28 32M H2 H N N 29 32M H3 H N N 30 32M H4 H N N 31 32M H5 H N N 32 32M H6 H N N 33 32M H7 H N N 34 32M H8 H N N 35 32M H9 H N N 36 32M H10 H N N 37 32M H11 H N N 38 32M H12 H N N 39 32M H13 H N N 40 32M H14 H N N 41 32M H15 H N N 42 32M H16 H N N 43 32M H17 H N N 44 32M H18 H N N 45 32M H19 H N N 46 32M H20 H N N 47 32M H21 H N N 48 32M H22 H N N 49 32M H23 H N N 50 32M H24 H N N 51 32M H25 H N N 52 32M H26 H N N 53 32M H27 H N N 54 32M H28 H N N 55 32M H29 H N N 56 32M H30 H N N 57 32M H31 H N N 58 32M H32 H N N 59 32M H33 H N N 60 32M H34 H N N 61 32M H35 H N N 62 32M H36 H N N 63 32M H37 H N N 64 32M H38 H N N 65 32M H39 H N N 66 32M H40 H N N 67 32M H41 H N N 68 32M H42 H N N 69 AIB N N N N 70 AIB CA C N N 71 AIB C C N N 72 AIB O O N N 73 AIB OXT O N N 74 AIB CB1 C N N 75 AIB CB2 C N N 76 AIB H H N N 77 AIB H2 H N N 78 AIB HXT H N N 79 AIB HB11 H N N 80 AIB HB12 H N N 81 AIB HB13 H N N 82 AIB HB21 H N N 83 AIB HB22 H N N 84 AIB HB23 H N N 85 ALA N N N N 86 ALA CA C N S 87 ALA C C N N 88 ALA O O N N 89 ALA CB C N N 90 ALA OXT O N N 91 ALA H H N N 92 ALA H2 H N N 93 ALA HA H N N 94 ALA HB1 H N N 95 ALA HB2 H N N 96 ALA HB3 H N N 97 ALA HXT H N N 98 ARG N N N N 99 ARG CA C N S 100 ARG C C N N 101 ARG O O N N 102 ARG CB C N N 103 ARG CG C N N 104 ARG CD C N N 105 ARG NE N N N 106 ARG CZ C N N 107 ARG NH1 N N N 108 ARG NH2 N N N 109 ARG OXT O N N 110 ARG H H N N 111 ARG H2 H N N 112 ARG HA H N N 113 ARG HB2 H N N 114 ARG HB3 H N N 115 ARG HG2 H N N 116 ARG HG3 H N N 117 ARG HD2 H N N 118 ARG HD3 H N N 119 ARG HE H N N 120 ARG HH11 H N N 121 ARG HH12 H N N 122 ARG HH21 H N N 123 ARG HH22 H N N 124 ARG HXT H N N 125 ASN N N N N 126 ASN CA C N S 127 ASN C C N N 128 ASN O O N N 129 ASN CB C N N 130 ASN CG C N N 131 ASN OD1 O N N 132 ASN ND2 N N N 133 ASN OXT O N N 134 ASN H H N N 135 ASN H2 H N N 136 ASN HA H N N 137 ASN HB2 H N N 138 ASN HB3 H N N 139 ASN HD21 H N N 140 ASN HD22 H N N 141 ASN HXT H N N 142 ASP N N N N 143 ASP CA C N S 144 ASP C C N N 145 ASP O O N N 146 ASP CB C N N 147 ASP CG C N N 148 ASP OD1 O N N 149 ASP OD2 O N N 150 ASP OXT O N N 151 ASP H H N N 152 ASP H2 H N N 153 ASP HA H N N 154 ASP HB2 H N N 155 ASP HB3 H N N 156 ASP HD2 H N N 157 ASP HXT H N N 158 CYS N N N N 159 CYS CA C N R 160 CYS C C N N 161 CYS O O N N 162 CYS CB C N N 163 CYS SG S N N 164 CYS OXT O N N 165 CYS H H N N 166 CYS H2 H N N 167 CYS HA H N N 168 CYS HB2 H N N 169 CYS HB3 H N N 170 CYS HG H N N 171 CYS HXT H N N 172 GLN N N N N 173 GLN CA C N S 174 GLN C C N N 175 GLN O O N N 176 GLN CB C N N 177 GLN CG C N N 178 GLN CD C N N 179 GLN OE1 O N N 180 GLN NE2 N N N 181 GLN OXT O N N 182 GLN H H N N 183 GLN H2 H N N 184 GLN HA H N N 185 GLN HB2 H N N 186 GLN HB3 H N N 187 GLN HG2 H N N 188 GLN HG3 H N N 189 GLN HE21 H N N 190 GLN HE22 H N N 191 GLN HXT H N N 192 GLU N N N N 193 GLU CA C N S 194 GLU C C N N 195 GLU O O N N 196 GLU CB C N N 197 GLU CG C N N 198 GLU CD C N N 199 GLU OE1 O N N 200 GLU OE2 O N N 201 GLU OXT O N N 202 GLU H H N N 203 GLU H2 H N N 204 GLU HA H N N 205 GLU HB2 H N N 206 GLU HB3 H N N 207 GLU HG2 H N N 208 GLU HG3 H N N 209 GLU HE2 H N N 210 GLU HXT H N N 211 GLY N N N N 212 GLY CA C N N 213 GLY C C N N 214 GLY O O N N 215 GLY OXT O N N 216 GLY H H N N 217 GLY H2 H N N 218 GLY HA2 H N N 219 GLY HA3 H N N 220 GLY HXT H N N 221 HIS N N N N 222 HIS CA C N S 223 HIS C C N N 224 HIS O O N N 225 HIS CB C N N 226 HIS CG C Y N 227 HIS ND1 N Y N 228 HIS CD2 C Y N 229 HIS CE1 C Y N 230 HIS NE2 N Y N 231 HIS OXT O N N 232 HIS H H N N 233 HIS H2 H N N 234 HIS HA H N N 235 HIS HB2 H N N 236 HIS HB3 H N N 237 HIS HD1 H N N 238 HIS HD2 H N N 239 HIS HE1 H N N 240 HIS HE2 H N N 241 HIS HXT H N N 242 HOH O O N N 243 HOH H1 H N N 244 HOH H2 H N N 245 ILE N N N N 246 ILE CA C N S 247 ILE C C N N 248 ILE O O N N 249 ILE CB C N S 250 ILE CG1 C N N 251 ILE CG2 C N N 252 ILE CD1 C N N 253 ILE OXT O N N 254 ILE H H N N 255 ILE H2 H N N 256 ILE HA H N N 257 ILE HB H N N 258 ILE HG12 H N N 259 ILE HG13 H N N 260 ILE HG21 H N N 261 ILE HG22 H N N 262 ILE HG23 H N N 263 ILE HD11 H N N 264 ILE HD12 H N N 265 ILE HD13 H N N 266 ILE HXT H N N 267 LEU N N N N 268 LEU CA C N S 269 LEU C C N N 270 LEU O O N N 271 LEU CB C N N 272 LEU CG C N N 273 LEU CD1 C N N 274 LEU CD2 C N N 275 LEU OXT O N N 276 LEU H H N N 277 LEU H2 H N N 278 LEU HA H N N 279 LEU HB2 H N N 280 LEU HB3 H N N 281 LEU HG H N N 282 LEU HD11 H N N 283 LEU HD12 H N N 284 LEU HD13 H N N 285 LEU HD21 H N N 286 LEU HD22 H N N 287 LEU HD23 H N N 288 LEU HXT H N N 289 LYS N N N N 290 LYS CA C N S 291 LYS C C N N 292 LYS O O N N 293 LYS CB C N N 294 LYS CG C N N 295 LYS CD C N N 296 LYS CE C N N 297 LYS NZ N N N 298 LYS OXT O N N 299 LYS H H N N 300 LYS H2 H N N 301 LYS HA H N N 302 LYS HB2 H N N 303 LYS HB3 H N N 304 LYS HG2 H N N 305 LYS HG3 H N N 306 LYS HD2 H N N 307 LYS HD3 H N N 308 LYS HE2 H N N 309 LYS HE3 H N N 310 LYS HZ1 H N N 311 LYS HZ2 H N N 312 LYS HZ3 H N N 313 LYS HXT H N N 314 PHE N N N N 315 PHE CA C N S 316 PHE C C N N 317 PHE O O N N 318 PHE CB C N N 319 PHE CG C Y N 320 PHE CD1 C Y N 321 PHE CD2 C Y N 322 PHE CE1 C Y N 323 PHE CE2 C Y N 324 PHE CZ C Y N 325 PHE OXT O N N 326 PHE H H N N 327 PHE H2 H N N 328 PHE HA H N N 329 PHE HB2 H N N 330 PHE HB3 H N N 331 PHE HD1 H N N 332 PHE HD2 H N N 333 PHE HE1 H N N 334 PHE HE2 H N N 335 PHE HZ H N N 336 PHE HXT H N N 337 PRO N N N N 338 PRO CA C N S 339 PRO C C N N 340 PRO O O N N 341 PRO CB C N N 342 PRO CG C N N 343 PRO CD C N N 344 PRO OXT O N N 345 PRO H H N N 346 PRO HA H N N 347 PRO HB2 H N N 348 PRO HB3 H N N 349 PRO HG2 H N N 350 PRO HG3 H N N 351 PRO HD2 H N N 352 PRO HD3 H N N 353 PRO HXT H N N 354 SER N N N N 355 SER CA C N S 356 SER C C N N 357 SER O O N N 358 SER CB C N N 359 SER OG O N N 360 SER OXT O N N 361 SER H H N N 362 SER H2 H N N 363 SER HA H N N 364 SER HB2 H N N 365 SER HB3 H N N 366 SER HG H N N 367 SER HXT H N N 368 THR N N N N 369 THR CA C N S 370 THR C C N N 371 THR O O N N 372 THR CB C N R 373 THR OG1 O N N 374 THR CG2 C N N 375 THR OXT O N N 376 THR H H N N 377 THR H2 H N N 378 THR HA H N N 379 THR HB H N N 380 THR HG1 H N N 381 THR HG21 H N N 382 THR HG22 H N N 383 THR HG23 H N N 384 THR HXT H N N 385 TRP N N N N 386 TRP CA C N S 387 TRP C C N N 388 TRP O O N N 389 TRP CB C N N 390 TRP CG C Y N 391 TRP CD1 C Y N 392 TRP CD2 C Y N 393 TRP NE1 N Y N 394 TRP CE2 C Y N 395 TRP CE3 C Y N 396 TRP CZ2 C Y N 397 TRP CZ3 C Y N 398 TRP CH2 C Y N 399 TRP OXT O N N 400 TRP H H N N 401 TRP H2 H N N 402 TRP HA H N N 403 TRP HB2 H N N 404 TRP HB3 H N N 405 TRP HD1 H N N 406 TRP HE1 H N N 407 TRP HE3 H N N 408 TRP HZ2 H N N 409 TRP HZ3 H N N 410 TRP HH2 H N N 411 TRP HXT H N N 412 TYR N N N N 413 TYR CA C N S 414 TYR C C N N 415 TYR O O N N 416 TYR CB C N N 417 TYR CG C Y N 418 TYR CD1 C Y N 419 TYR CD2 C Y N 420 TYR CE1 C Y N 421 TYR CE2 C Y N 422 TYR CZ C Y N 423 TYR OH O N N 424 TYR OXT O N N 425 TYR H H N N 426 TYR H2 H N N 427 TYR HA H N N 428 TYR HB2 H N N 429 TYR HB3 H N N 430 TYR HD1 H N N 431 TYR HD2 H N N 432 TYR HE1 H N N 433 TYR HE2 H N N 434 TYR HH H N N 435 TYR HXT H N N 436 VAL N N N N 437 VAL CA C N S 438 VAL C C N N 439 VAL O O N N 440 VAL CB C N N 441 VAL CG1 C N N 442 VAL CG2 C N N 443 VAL OXT O N N 444 VAL H H N N 445 VAL H2 H N N 446 VAL HA H N N 447 VAL HB H N N 448 VAL HG11 H N N 449 VAL HG12 H N N 450 VAL HG13 H N N 451 VAL HG21 H N N 452 VAL HG22 H N N 453 VAL HG23 H N N 454 VAL HXT H N N 455 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 32M OAB CAD sing N N 1 32M OAV CAL sing N N 2 32M OAV CAJ sing N N 3 32M CAD CAJ sing N N 4 32M CAL CAN sing N N 5 32M CAN OAX sing N N 6 32M OAX CAP sing N N 7 32M CAP CAR sing N N 8 32M CAR OAZ sing N N 9 32M OAZ CAT sing N N 10 32M CAT CAU sing N N 11 32M CAU OBA sing N N 12 32M OBA CAS sing N N 13 32M CAS CAQ sing N N 14 32M OAY CAQ sing N N 15 32M OAY CAO sing N N 16 32M CAO CAM sing N N 17 32M CAM OAW sing N N 18 32M CAK OAW sing N N 19 32M CAK CAI sing N N 20 32M CAI CAH sing N N 21 32M CAH CAG sing N N 22 32M CAG CAF sing N N 23 32M CAF CAE sing N N 24 32M CAE CAC sing N N 25 32M CAC CAA sing N N 26 32M CAA H1 sing N N 27 32M CAA H2 sing N N 28 32M CAA H3 sing N N 29 32M CAC H4 sing N N 30 32M CAC H5 sing N N 31 32M CAE H6 sing N N 32 32M CAE H7 sing N N 33 32M CAF H8 sing N N 34 32M CAF H9 sing N N 35 32M CAG H10 sing N N 36 32M CAG H11 sing N N 37 32M CAH H12 sing N N 38 32M CAH H13 sing N N 39 32M CAI H14 sing N N 40 32M CAI H15 sing N N 41 32M CAK H16 sing N N 42 32M CAK H17 sing N N 43 32M CAM H18 sing N N 44 32M CAM H19 sing N N 45 32M CAO H20 sing N N 46 32M CAO H21 sing N N 47 32M CAQ H22 sing N N 48 32M CAQ H23 sing N N 49 32M CAS H24 sing N N 50 32M CAS H25 sing N N 51 32M CAU H26 sing N N 52 32M CAU H27 sing N N 53 32M CAT H28 sing N N 54 32M CAT H29 sing N N 55 32M CAR H30 sing N N 56 32M CAR H31 sing N N 57 32M CAP H32 sing N N 58 32M CAP H33 sing N N 59 32M CAN H34 sing N N 60 32M CAN H35 sing N N 61 32M CAL H36 sing N N 62 32M CAL H37 sing N N 63 32M CAJ H38 sing N N 64 32M CAJ H39 sing N N 65 32M CAD H40 sing N N 66 32M CAD H41 sing N N 67 32M OAB H42 sing N N 68 AIB N CA sing N N 69 AIB N H sing N N 70 AIB N H2 sing N N 71 AIB CA C sing N N 72 AIB CA CB1 sing N N 73 AIB CA CB2 sing N N 74 AIB C O doub N N 75 AIB C OXT sing N N 76 AIB OXT HXT sing N N 77 AIB CB1 HB11 sing N N 78 AIB CB1 HB12 sing N N 79 AIB CB1 HB13 sing N N 80 AIB CB2 HB21 sing N N 81 AIB CB2 HB22 sing N N 82 AIB CB2 HB23 sing N N 83 ALA N CA sing N N 84 ALA N H sing N N 85 ALA N H2 sing N N 86 ALA CA C sing N N 87 ALA CA CB sing N N 88 ALA CA HA sing N N 89 ALA C O doub N N 90 ALA C OXT sing N N 91 ALA CB HB1 sing N N 92 ALA CB HB2 sing N N 93 ALA CB HB3 sing N N 94 ALA OXT HXT sing N N 95 ARG N CA sing N N 96 ARG N H sing N N 97 ARG N H2 sing N N 98 ARG CA C sing N N 99 ARG CA CB sing N N 100 ARG CA HA sing N N 101 ARG C O doub N N 102 ARG C OXT sing N N 103 ARG CB CG sing N N 104 ARG CB HB2 sing N N 105 ARG CB HB3 sing N N 106 ARG CG CD sing N N 107 ARG CG HG2 sing N N 108 ARG CG HG3 sing N N 109 ARG CD NE sing N N 110 ARG CD HD2 sing N N 111 ARG CD HD3 sing N N 112 ARG NE CZ sing N N 113 ARG NE HE sing N N 114 ARG CZ NH1 sing N N 115 ARG CZ NH2 doub N N 116 ARG NH1 HH11 sing N N 117 ARG NH1 HH12 sing N N 118 ARG NH2 HH21 sing N N 119 ARG NH2 HH22 sing N N 120 ARG OXT HXT sing N N 121 ASN N CA sing N N 122 ASN N H sing N N 123 ASN N H2 sing N N 124 ASN CA C sing N N 125 ASN CA CB sing N N 126 ASN CA HA sing N N 127 ASN C O doub N N 128 ASN C OXT sing N N 129 ASN CB CG sing N N 130 ASN CB HB2 sing N N 131 ASN CB HB3 sing N N 132 ASN CG OD1 doub N N 133 ASN CG ND2 sing N N 134 ASN ND2 HD21 sing N N 135 ASN ND2 HD22 sing N N 136 ASN OXT HXT sing N N 137 ASP N CA sing N N 138 ASP N H sing N N 139 ASP N H2 sing N N 140 ASP CA C sing N N 141 ASP CA CB sing N N 142 ASP CA HA sing N N 143 ASP C O doub N N 144 ASP C OXT sing N N 145 ASP CB CG sing N N 146 ASP CB HB2 sing N N 147 ASP CB HB3 sing N N 148 ASP CG OD1 doub N N 149 ASP CG OD2 sing N N 150 ASP OD2 HD2 sing N N 151 ASP OXT HXT sing N N 152 CYS N CA sing N N 153 CYS N H sing N N 154 CYS N H2 sing N N 155 CYS CA C sing N N 156 CYS CA CB sing N N 157 CYS CA HA sing N N 158 CYS C O doub N N 159 CYS C OXT sing N N 160 CYS CB SG sing N N 161 CYS CB HB2 sing N N 162 CYS CB HB3 sing N N 163 CYS SG HG sing N N 164 CYS OXT HXT sing N N 165 GLN N CA sing N N 166 GLN N H sing N N 167 GLN N H2 sing N N 168 GLN CA C sing N N 169 GLN CA CB sing N N 170 GLN CA HA sing N N 171 GLN C O doub N N 172 GLN C OXT sing N N 173 GLN CB CG sing N N 174 GLN CB HB2 sing N N 175 GLN CB HB3 sing N N 176 GLN CG CD sing N N 177 GLN CG HG2 sing N N 178 GLN CG HG3 sing N N 179 GLN CD OE1 doub N N 180 GLN CD NE2 sing N N 181 GLN NE2 HE21 sing N N 182 GLN NE2 HE22 sing N N 183 GLN OXT HXT sing N N 184 GLU N CA sing N N 185 GLU N H sing N N 186 GLU N H2 sing N N 187 GLU CA C sing N N 188 GLU CA CB sing N N 189 GLU CA HA sing N N 190 GLU C O doub N N 191 GLU C OXT sing N N 192 GLU CB CG sing N N 193 GLU CB HB2 sing N N 194 GLU CB HB3 sing N N 195 GLU CG CD sing N N 196 GLU CG HG2 sing N N 197 GLU CG HG3 sing N N 198 GLU CD OE1 doub N N 199 GLU CD OE2 sing N N 200 GLU OE2 HE2 sing N N 201 GLU OXT HXT sing N N 202 GLY N CA sing N N 203 GLY N H sing N N 204 GLY N H2 sing N N 205 GLY CA C sing N N 206 GLY CA HA2 sing N N 207 GLY CA HA3 sing N N 208 GLY C O doub N N 209 GLY C OXT sing N N 210 GLY OXT HXT sing N N 211 HIS N CA sing N N 212 HIS N H sing N N 213 HIS N H2 sing N N 214 HIS CA C sing N N 215 HIS CA CB sing N N 216 HIS CA HA sing N N 217 HIS C O doub N N 218 HIS C OXT sing N N 219 HIS CB CG sing N N 220 HIS CB HB2 sing N N 221 HIS CB HB3 sing N N 222 HIS CG ND1 sing Y N 223 HIS CG CD2 doub Y N 224 HIS ND1 CE1 doub Y N 225 HIS ND1 HD1 sing N N 226 HIS CD2 NE2 sing Y N 227 HIS CD2 HD2 sing N N 228 HIS CE1 NE2 sing Y N 229 HIS CE1 HE1 sing N N 230 HIS NE2 HE2 sing N N 231 HIS OXT HXT sing N N 232 HOH O H1 sing N N 233 HOH O H2 sing N N 234 ILE N CA sing N N 235 ILE N H sing N N 236 ILE N H2 sing N N 237 ILE CA C sing N N 238 ILE CA CB sing N N 239 ILE CA HA sing N N 240 ILE C O doub N N 241 ILE C OXT sing N N 242 ILE CB CG1 sing N N 243 ILE CB CG2 sing N N 244 ILE CB HB sing N N 245 ILE CG1 CD1 sing N N 246 ILE CG1 HG12 sing N N 247 ILE CG1 HG13 sing N N 248 ILE CG2 HG21 sing N N 249 ILE CG2 HG22 sing N N 250 ILE CG2 HG23 sing N N 251 ILE CD1 HD11 sing N N 252 ILE CD1 HD12 sing N N 253 ILE CD1 HD13 sing N N 254 ILE OXT HXT sing N N 255 LEU N CA sing N N 256 LEU N H sing N N 257 LEU N H2 sing N N 258 LEU CA C sing N N 259 LEU CA CB sing N N 260 LEU CA HA sing N N 261 LEU C O doub N N 262 LEU C OXT sing N N 263 LEU CB CG sing N N 264 LEU CB HB2 sing N N 265 LEU CB HB3 sing N N 266 LEU CG CD1 sing N N 267 LEU CG CD2 sing N N 268 LEU CG HG sing N N 269 LEU CD1 HD11 sing N N 270 LEU CD1 HD12 sing N N 271 LEU CD1 HD13 sing N N 272 LEU CD2 HD21 sing N N 273 LEU CD2 HD22 sing N N 274 LEU CD2 HD23 sing N N 275 LEU OXT HXT sing N N 276 LYS N CA sing N N 277 LYS N H sing N N 278 LYS N H2 sing N N 279 LYS CA C sing N N 280 LYS CA CB sing N N 281 LYS CA HA sing N N 282 LYS C O doub N N 283 LYS C OXT sing N N 284 LYS CB CG sing N N 285 LYS CB HB2 sing N N 286 LYS CB HB3 sing N N 287 LYS CG CD sing N N 288 LYS CG HG2 sing N N 289 LYS CG HG3 sing N N 290 LYS CD CE sing N N 291 LYS CD HD2 sing N N 292 LYS CD HD3 sing N N 293 LYS CE NZ sing N N 294 LYS CE HE2 sing N N 295 LYS CE HE3 sing N N 296 LYS NZ HZ1 sing N N 297 LYS NZ HZ2 sing N N 298 LYS NZ HZ3 sing N N 299 LYS OXT HXT sing N N 300 PHE N CA sing N N 301 PHE N H sing N N 302 PHE N H2 sing N N 303 PHE CA C sing N N 304 PHE CA CB sing N N 305 PHE CA HA sing N N 306 PHE C O doub N N 307 PHE C OXT sing N N 308 PHE CB CG sing N N 309 PHE CB HB2 sing N N 310 PHE CB HB3 sing N N 311 PHE CG CD1 doub Y N 312 PHE CG CD2 sing Y N 313 PHE CD1 CE1 sing Y N 314 PHE CD1 HD1 sing N N 315 PHE CD2 CE2 doub Y N 316 PHE CD2 HD2 sing N N 317 PHE CE1 CZ doub Y N 318 PHE CE1 HE1 sing N N 319 PHE CE2 CZ sing Y N 320 PHE CE2 HE2 sing N N 321 PHE CZ HZ sing N N 322 PHE OXT HXT sing N N 323 PRO N CA sing N N 324 PRO N CD sing N N 325 PRO N H sing N N 326 PRO CA C sing N N 327 PRO CA CB sing N N 328 PRO CA HA sing N N 329 PRO C O doub N N 330 PRO C OXT sing N N 331 PRO CB CG sing N N 332 PRO CB HB2 sing N N 333 PRO CB HB3 sing N N 334 PRO CG CD sing N N 335 PRO CG HG2 sing N N 336 PRO CG HG3 sing N N 337 PRO CD HD2 sing N N 338 PRO CD HD3 sing N N 339 PRO OXT HXT sing N N 340 SER N CA sing N N 341 SER N H sing N N 342 SER N H2 sing N N 343 SER CA C sing N N 344 SER CA CB sing N N 345 SER CA HA sing N N 346 SER C O doub N N 347 SER C OXT sing N N 348 SER CB OG sing N N 349 SER CB HB2 sing N N 350 SER CB HB3 sing N N 351 SER OG HG sing N N 352 SER OXT HXT sing N N 353 THR N CA sing N N 354 THR N H sing N N 355 THR N H2 sing N N 356 THR CA C sing N N 357 THR CA CB sing N N 358 THR CA HA sing N N 359 THR C O doub N N 360 THR C OXT sing N N 361 THR CB OG1 sing N N 362 THR CB CG2 sing N N 363 THR CB HB sing N N 364 THR OG1 HG1 sing N N 365 THR CG2 HG21 sing N N 366 THR CG2 HG22 sing N N 367 THR CG2 HG23 sing N N 368 THR OXT HXT sing N N 369 TRP N CA sing N N 370 TRP N H sing N N 371 TRP N H2 sing N N 372 TRP CA C sing N N 373 TRP CA CB sing N N 374 TRP CA HA sing N N 375 TRP C O doub N N 376 TRP C OXT sing N N 377 TRP CB CG sing N N 378 TRP CB HB2 sing N N 379 TRP CB HB3 sing N N 380 TRP CG CD1 doub Y N 381 TRP CG CD2 sing Y N 382 TRP CD1 NE1 sing Y N 383 TRP CD1 HD1 sing N N 384 TRP CD2 CE2 doub Y N 385 TRP CD2 CE3 sing Y N 386 TRP NE1 CE2 sing Y N 387 TRP NE1 HE1 sing N N 388 TRP CE2 CZ2 sing Y N 389 TRP CE3 CZ3 doub Y N 390 TRP CE3 HE3 sing N N 391 TRP CZ2 CH2 doub Y N 392 TRP CZ2 HZ2 sing N N 393 TRP CZ3 CH2 sing Y N 394 TRP CZ3 HZ3 sing N N 395 TRP CH2 HH2 sing N N 396 TRP OXT HXT sing N N 397 TYR N CA sing N N 398 TYR N H sing N N 399 TYR N H2 sing N N 400 TYR CA C sing N N 401 TYR CA CB sing N N 402 TYR CA HA sing N N 403 TYR C O doub N N 404 TYR C OXT sing N N 405 TYR CB CG sing N N 406 TYR CB HB2 sing N N 407 TYR CB HB3 sing N N 408 TYR CG CD1 doub Y N 409 TYR CG CD2 sing Y N 410 TYR CD1 CE1 sing Y N 411 TYR CD1 HD1 sing N N 412 TYR CD2 CE2 doub Y N 413 TYR CD2 HD2 sing N N 414 TYR CE1 CZ doub Y N 415 TYR CE1 HE1 sing N N 416 TYR CE2 CZ sing Y N 417 TYR CE2 HE2 sing N N 418 TYR CZ OH sing N N 419 TYR OH HH sing N N 420 TYR OXT HXT sing N N 421 VAL N CA sing N N 422 VAL N H sing N N 423 VAL N H2 sing N N 424 VAL CA C sing N N 425 VAL CA CB sing N N 426 VAL CA HA sing N N 427 VAL C O doub N N 428 VAL C OXT sing N N 429 VAL CB CG1 sing N N 430 VAL CB CG2 sing N N 431 VAL CB HB sing N N 432 VAL CG1 HG11 sing N N 433 VAL CG1 HG12 sing N N 434 VAL CG1 HG13 sing N N 435 VAL CG2 HG21 sing N N 436 VAL CG2 HG22 sing N N 437 VAL CG2 HG23 sing N N 438 VAL OXT HXT sing N N 439 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3IOL _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 4ZGM _atom_sites.fract_transf_matrix[1][1] 0.010459 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027941 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023430 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_