HEADER TRANSCRIPTION 27-APR-15 4ZHU TITLE CRYSTAL STRUCTURE OF A BACTERIAL REPRESSOR PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: YFIR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA PAO1; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 GENE: YFIR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PERIPLASMIC BINDING PROTEIN, REPRESSOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR S.LI,T.LI,Y.WANG,M.BARTLAM REVDAT 1 27-APR-16 4ZHU 0 JRNL AUTH S.LI,T.LI,Y.XU,Q.ZHANG,W.ZHANG,S.CHE,R.LIU,Y.WANG,M.BARTLAM JRNL TITL STRUCTURAL INSIGHTS INTO YFIR SEQUESTERING BY YFIB IN JRNL TITL 2 PSEUDOMONAS AERUGINOSA PAO1 JRNL REF SCI REP V. 5 16915 2015 JRNL REFN ESSN 2045-2322 JRNL PMID 26593397 JRNL DOI 10.1038/SREP16915 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 82.7 REMARK 3 NUMBER OF REFLECTIONS : 21162 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.740 REMARK 3 FREE R VALUE TEST SET COUNT : 1004 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.5471 - 4.5823 1.00 3676 194 0.1789 0.1940 REMARK 3 2 4.5823 - 3.6381 1.00 3514 172 0.1528 0.1736 REMARK 3 3 3.6381 - 3.1786 1.00 3465 166 0.1814 0.2311 REMARK 3 4 3.1786 - 2.8881 0.89 3086 131 0.2175 0.2509 REMARK 3 5 2.8881 - 2.6811 0.74 2540 134 0.2119 0.2852 REMARK 3 6 2.6811 - 2.5231 0.61 2083 106 0.2045 0.2438 REMARK 3 7 2.5231 - 2.3968 0.53 1794 101 0.1998 0.2268 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2339 REMARK 3 ANGLE : 1.160 3169 REMARK 3 CHIRALITY : 0.045 363 REMARK 3 PLANARITY : 0.005 416 REMARK 3 DIHEDRAL : 14.987 873 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 39 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 91.9120 35.0349 26.6029 REMARK 3 T TENSOR REMARK 3 T11: 0.2006 T22: 0.2052 REMARK 3 T33: 0.2645 T12: -0.0109 REMARK 3 T13: 0.0597 T23: 0.0068 REMARK 3 L TENSOR REMARK 3 L11: 6.2228 L22: 5.1465 REMARK 3 L33: 3.2917 L12: -2.4016 REMARK 3 L13: 1.4896 L23: -1.2567 REMARK 3 S TENSOR REMARK 3 S11: 0.1820 S12: 0.2140 S13: -0.8432 REMARK 3 S21: 0.2860 S22: -0.2565 S23: 0.7232 REMARK 3 S31: 0.1444 S32: 0.1156 S33: -0.0968 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 87.6859 52.4225 15.8184 REMARK 3 T TENSOR REMARK 3 T11: 0.5729 T22: 0.1786 REMARK 3 T33: 0.4619 T12: 0.0486 REMARK 3 T13: -0.1704 T23: 0.2090 REMARK 3 L TENSOR REMARK 3 L11: 1.5519 L22: 3.9792 REMARK 3 L33: 2.7576 L12: 1.9493 REMARK 3 L13: 0.9179 L23: -0.7174 REMARK 3 S TENSOR REMARK 3 S11: -0.4340 S12: 0.5119 S13: 1.1736 REMARK 3 S21: -0.8468 S22: 0.0561 S23: 1.4587 REMARK 3 S31: -0.7617 S32: -0.8979 S33: -0.3630 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 67 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 99.7760 42.8445 18.7256 REMARK 3 T TENSOR REMARK 3 T11: 0.2644 T22: 0.2339 REMARK 3 T33: 0.2059 T12: -0.0069 REMARK 3 T13: 0.0148 T23: 0.0772 REMARK 3 L TENSOR REMARK 3 L11: 2.4376 L22: 1.7595 REMARK 3 L33: 1.1907 L12: -0.4960 REMARK 3 L13: -0.3198 L23: 0.3020 REMARK 3 S TENSOR REMARK 3 S11: 0.0562 S12: 0.2125 S13: 0.2091 REMARK 3 S21: -0.1902 S22: -0.0373 S23: -0.0587 REMARK 3 S31: -0.1515 S32: 0.0777 S33: -0.0587 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 120 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): 108.6618 53.7982 26.9217 REMARK 3 T TENSOR REMARK 3 T11: 0.3641 T22: 0.4634 REMARK 3 T33: 0.4642 T12: -0.0864 REMARK 3 T13: -0.0314 T23: -0.1021 REMARK 3 L TENSOR REMARK 3 L11: 7.1839 L22: 3.2989 REMARK 3 L33: 5.0501 L12: -2.2721 REMARK 3 L13: 3.5380 L23: -1.2233 REMARK 3 S TENSOR REMARK 3 S11: -0.4937 S12: -0.5583 S13: 2.2038 REMARK 3 S21: -0.1672 S22: -0.1077 S23: -0.8022 REMARK 3 S31: -0.7663 S32: 1.0008 S33: 0.1551 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 131 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 98.8746 48.8064 26.6352 REMARK 3 T TENSOR REMARK 3 T11: 0.3943 T22: 0.2482 REMARK 3 T33: 0.1753 T12: -0.0203 REMARK 3 T13: -0.0544 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 1.5782 L22: 3.3468 REMARK 3 L33: 0.5517 L12: 0.0495 REMARK 3 L13: -0.9534 L23: -0.0184 REMARK 3 S TENSOR REMARK 3 S11: 0.1232 S12: -0.2010 S13: 0.1927 REMARK 3 S21: 0.2010 S22: -0.1371 S23: 0.0736 REMARK 3 S31: -0.2698 S32: 0.2411 S33: 0.0791 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 144 THROUGH 156 ) REMARK 3 ORIGIN FOR THE GROUP (A): 97.7107 46.2108 33.1921 REMARK 3 T TENSOR REMARK 3 T11: 0.3617 T22: 0.2864 REMARK 3 T33: 0.2576 T12: 0.0169 REMARK 3 T13: 0.0258 T23: -0.0756 REMARK 3 L TENSOR REMARK 3 L11: 1.9241 L22: 3.5543 REMARK 3 L33: 1.5342 L12: 0.4106 REMARK 3 L13: -0.0674 L23: -0.0925 REMARK 3 S TENSOR REMARK 3 S11: -0.2101 S12: -0.5589 S13: 0.4647 REMARK 3 S21: 0.2600 S22: 0.2347 S23: -0.7789 REMARK 3 S31: -0.3267 S32: 0.0368 S33: -0.1650 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 157 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 91.4833 38.3934 35.6789 REMARK 3 T TENSOR REMARK 3 T11: 0.4694 T22: 0.2686 REMARK 3 T33: 0.2413 T12: 0.0168 REMARK 3 T13: 0.0615 T23: -0.0296 REMARK 3 L TENSOR REMARK 3 L11: 2.5656 L22: 4.0516 REMARK 3 L33: 5.3389 L12: -1.5094 REMARK 3 L13: -0.3474 L23: -3.9164 REMARK 3 S TENSOR REMARK 3 S11: 0.4111 S12: -0.2853 S13: 0.2466 REMARK 3 S21: 1.1585 S22: -0.5287 S23: 0.2377 REMARK 3 S31: 0.3312 S32: -0.3899 S33: 0.1141 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 90.7308 55.9299 28.3154 REMARK 3 T TENSOR REMARK 3 T11: 0.3485 T22: 0.1721 REMARK 3 T33: 0.4456 T12: 0.0403 REMARK 3 T13: 0.0754 T23: -0.0172 REMARK 3 L TENSOR REMARK 3 L11: 2.6959 L22: 2.9723 REMARK 3 L33: 2.9277 L12: 2.3144 REMARK 3 L13: -1.3411 L23: -0.1911 REMARK 3 S TENSOR REMARK 3 S11: 0.0331 S12: 0.0776 S13: 0.8705 REMARK 3 S21: 0.0783 S22: 0.0212 S23: 0.6083 REMARK 3 S31: -0.8127 S32: -0.1985 S33: -0.0888 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 178 THROUGH 189 ) REMARK 3 ORIGIN FOR THE GROUP (A): 83.1759 41.8878 34.8348 REMARK 3 T TENSOR REMARK 3 T11: 0.4373 T22: 0.4783 REMARK 3 T33: 0.3490 T12: 0.0254 REMARK 3 T13: 0.1773 T23: -0.0228 REMARK 3 L TENSOR REMARK 3 L11: 2.0876 L22: 3.8660 REMARK 3 L33: 2.6680 L12: 0.9668 REMARK 3 L13: 0.4496 L23: -2.1385 REMARK 3 S TENSOR REMARK 3 S11: -0.5677 S12: -0.8360 S13: 0.3196 REMARK 3 S21: 0.8867 S22: 1.1024 S23: 0.9811 REMARK 3 S31: 0.1261 S32: -0.7747 S33: -0.1997 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 39 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 91.9275 64.2366 36.3679 REMARK 3 T TENSOR REMARK 3 T11: 0.3978 T22: 0.2550 REMARK 3 T33: 0.2770 T12: -0.0217 REMARK 3 T13: 0.0725 T23: -0.1192 REMARK 3 L TENSOR REMARK 3 L11: 4.8489 L22: 3.9716 REMARK 3 L33: 2.3547 L12: 1.4257 REMARK 3 L13: -0.1331 L23: -0.5980 REMARK 3 S TENSOR REMARK 3 S11: -0.1861 S12: 0.4375 S13: -0.3619 REMARK 3 S21: -0.7298 S22: 0.0586 S23: -0.1167 REMARK 3 S31: 0.1862 S32: 0.1067 S33: 0.0392 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 59 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 83.4352 67.9473 43.4845 REMARK 3 T TENSOR REMARK 3 T11: 0.3301 T22: 0.2853 REMARK 3 T33: 0.4236 T12: -0.0859 REMARK 3 T13: 0.0902 T23: -0.0734 REMARK 3 L TENSOR REMARK 3 L11: 2.7257 L22: 1.7034 REMARK 3 L33: 1.2328 L12: -0.4233 REMARK 3 L13: 0.4827 L23: 0.0016 REMARK 3 S TENSOR REMARK 3 S11: -0.1046 S12: -0.1566 S13: -0.4367 REMARK 3 S21: -0.0799 S22: -0.1076 S23: 0.5442 REMARK 3 S31: 0.1600 S32: -0.2122 S33: 0.1387 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 85 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 84.2442 68.4753 50.9295 REMARK 3 T TENSOR REMARK 3 T11: 0.4073 T22: 0.3367 REMARK 3 T33: 0.3692 T12: -0.0991 REMARK 3 T13: 0.1607 T23: -0.0501 REMARK 3 L TENSOR REMARK 3 L11: 2.5877 L22: 3.6885 REMARK 3 L33: 1.7901 L12: -0.3055 REMARK 3 L13: -0.9952 L23: 0.1578 REMARK 3 S TENSOR REMARK 3 S11: 0.0380 S12: -0.5338 S13: -0.1271 REMARK 3 S21: 0.5921 S22: -0.1559 S23: 0.7031 REMARK 3 S31: 0.3261 S32: -0.2818 S33: 0.1117 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 140 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): 94.2495 59.8917 52.1481 REMARK 3 T TENSOR REMARK 3 T11: 0.7896 T22: 0.5083 REMARK 3 T33: 0.5893 T12: 0.0918 REMARK 3 T13: 0.0614 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 3.1493 L22: 5.7739 REMARK 3 L33: 2.6109 L12: 3.3844 REMARK 3 L13: -2.1111 L23: -3.5872 REMARK 3 S TENSOR REMARK 3 S11: -0.0759 S12: -1.4140 S13: -0.7036 REMARK 3 S21: 1.5813 S22: -0.5883 S23: -1.1058 REMARK 3 S31: 0.5533 S32: 0.6702 S33: 0.1280 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 151 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): 97.5050 58.9176 41.1989 REMARK 3 T TENSOR REMARK 3 T11: 0.3948 T22: 0.2069 REMARK 3 T33: 0.3774 T12: 0.0341 REMARK 3 T13: 0.0787 T23: -0.0874 REMARK 3 L TENSOR REMARK 3 L11: 5.1833 L22: 2.4271 REMARK 3 L33: 5.2490 L12: 1.6987 REMARK 3 L13: -2.8214 L23: -0.9763 REMARK 3 S TENSOR REMARK 3 S11: -0.2181 S12: -0.5925 S13: -0.5622 REMARK 3 S21: 0.2691 S22: 0.0359 S23: -0.2142 REMARK 3 S31: 0.3463 S32: 1.0889 S33: -0.3270 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 161 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 84.8323 53.4802 49.7161 REMARK 3 T TENSOR REMARK 3 T11: 0.7211 T22: 0.3628 REMARK 3 T33: 0.5268 T12: -0.1537 REMARK 3 T13: 0.2257 T23: 0.0215 REMARK 3 L TENSOR REMARK 3 L11: 3.7678 L22: 0.9376 REMARK 3 L33: 3.3479 L12: 0.6917 REMARK 3 L13: -1.5037 L23: -0.5128 REMARK 3 S TENSOR REMARK 3 S11: 0.2355 S12: -0.7150 S13: -0.7948 REMARK 3 S21: 0.8101 S22: -0.3456 S23: 0.1368 REMARK 3 S31: 0.5741 S32: -0.2432 S33: 0.0274 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 178 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): 89.2414 49.2437 41.3735 REMARK 3 T TENSOR REMARK 3 T11: 0.6922 T22: 0.1954 REMARK 3 T33: 0.5347 T12: -0.0586 REMARK 3 T13: 0.2268 T23: -0.1752 REMARK 3 L TENSOR REMARK 3 L11: 1.3150 L22: 2.9750 REMARK 3 L33: 6.9144 L12: 1.6651 REMARK 3 L13: -0.8742 L23: -3.3875 REMARK 3 S TENSOR REMARK 3 S11: -0.4732 S12: 0.1884 S13: -0.7925 REMARK 3 S21: 0.7251 S22: -0.4752 S23: -0.1919 REMARK 3 S31: 0.3807 S32: 0.8015 S33: -0.2529 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZHU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209313. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25665 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.397 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, 1.5M LITHIUM SULFATE REMARK 280 MONOHYDRATE, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.74100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 60.63400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 60.63400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 64.11150 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 60.63400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 60.63400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 21.37050 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 60.63400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.63400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 64.11150 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 60.63400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.63400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 21.37050 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 42.74100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 90 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 332 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 337 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 SER A 3 REMARK 465 LEU A 4 REMARK 465 PRO A 5 REMARK 465 THR A 6 REMARK 465 LEU A 7 REMARK 465 GLN A 8 REMARK 465 PRO A 9 REMARK 465 LEU A 10 REMARK 465 ASP A 11 REMARK 465 LEU A 12 REMARK 465 TYR A 13 REMARK 465 ARG A 14 REMARK 465 ARG A 15 REMARK 465 THR A 16 REMARK 465 LEU A 17 REMARK 465 ALA A 18 REMARK 465 CYS A 19 REMARK 465 LEU A 20 REMARK 465 VAL A 21 REMARK 465 LEU A 22 REMARK 465 ALA A 23 REMARK 465 VAL A 24 REMARK 465 SER A 25 REMARK 465 CYS A 26 REMARK 465 LEU A 27 REMARK 465 GLY A 28 REMARK 465 GLY A 29 REMARK 465 GLY A 30 REMARK 465 GLY A 31 REMARK 465 LEU A 32 REMARK 465 TRP A 33 REMARK 465 ALA A 34 REMARK 465 ASP A 35 REMARK 465 ASP A 36 REMARK 465 ALA A 37 REMARK 465 ARG A 38 REMARK 465 PRO A 190 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 SER B 3 REMARK 465 LEU B 4 REMARK 465 PRO B 5 REMARK 465 THR B 6 REMARK 465 LEU B 7 REMARK 465 GLN B 8 REMARK 465 PRO B 9 REMARK 465 LEU B 10 REMARK 465 ASP B 11 REMARK 465 LEU B 12 REMARK 465 TYR B 13 REMARK 465 ARG B 14 REMARK 465 ARG B 15 REMARK 465 THR B 16 REMARK 465 LEU B 17 REMARK 465 ALA B 18 REMARK 465 CYS B 19 REMARK 465 LEU B 20 REMARK 465 VAL B 21 REMARK 465 LEU B 22 REMARK 465 ALA B 23 REMARK 465 VAL B 24 REMARK 465 SER B 25 REMARK 465 CYS B 26 REMARK 465 LEU B 27 REMARK 465 GLY B 28 REMARK 465 GLY B 29 REMARK 465 GLY B 30 REMARK 465 GLY B 31 REMARK 465 LEU B 32 REMARK 465 TRP B 33 REMARK 465 ALA B 34 REMARK 465 ASP B 35 REMARK 465 ASP B 36 REMARK 465 ALA B 37 REMARK 465 ARG B 38 REMARK 465 ARG B 186 REMARK 465 GLN B 187 REMARK 465 ALA B 188 REMARK 465 THR B 189 REMARK 465 PRO B 190 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 42 O HOH A 301 1.85 REMARK 500 NH1 ARG B 60 O HOH B 301 1.90 REMARK 500 OE2 GLU A 77 O HOH A 302 1.90 REMARK 500 O HOH A 333 O HOH A 359 1.96 REMARK 500 O HOH A 328 O HOH A 343 1.98 REMARK 500 O HOH B 339 O HOH B 341 2.05 REMARK 500 N LEU A 166 O HOH A 303 2.13 REMARK 500 NH1 ARG A 99 O2 SO4 A 201 2.14 REMARK 500 O HOH A 356 O HOH A 366 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 358 O HOH B 322 3644 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 40 -61.46 71.14 REMARK 500 GLU B 144 25.94 -76.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN A 187 ALA A 188 147.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ZHV RELATED DB: PDB REMARK 900 RELATED ID: 4ZHW RELATED DB: PDB REMARK 900 RELATED ID: 4ZHY RELATED DB: PDB DBREF 4ZHU A 1 190 UNP Q9I4L4 Q9I4L4_PSEAE 1 190 DBREF 4ZHU B 1 190 UNP Q9I4L4 Q9I4L4_PSEAE 1 190 SEQRES 1 A 190 MET PRO SER LEU PRO THR LEU GLN PRO LEU ASP LEU TYR SEQRES 2 A 190 ARG ARG THR LEU ALA CYS LEU VAL LEU ALA VAL SER CYS SEQRES 3 A 190 LEU GLY GLY GLY GLY LEU TRP ALA ASP ASP ALA ARG THR SEQRES 4 A 190 SER ILE GLU GLN ARG SER ASN ALA VAL SER GLN VAL LEU SEQRES 5 A 190 LEU GLY ILE PHE SER TYR VAL ARG TRP PRO LYS GLU PRO SEQRES 6 A 190 ALA VAL LEU GLN LEU CYS VAL VAL GLY PRO THR GLU TYR SEQRES 7 A 190 ALA ASP GLY LEU LEU ARG GLY MET VAL GLN ALA ASN GLY SEQRES 8 A 190 ARG ARG VAL HIS ALA GLU ARG ARG ALA VAL ASP ASN PRO SEQRES 9 A 190 ASP LEU GLY THR LEU CYS ASN VAL ILE TYR LEU GLY VAL SEQRES 10 A 190 VAL ASP GLU ARG GLU ARG GLN GLN VAL PHE ARG SER LEU SEQRES 11 A 190 ALA GLY HIS PRO VAL LEU SER ILE SER GLU ARG GLY THR SEQRES 12 A 190 GLU CYS SER VAL GLY SER MET PHE CYS LEU ASN VAL GLY SEQRES 13 A 190 GLY PRO ARG ILE THR PHE GLU ALA ASN LEU ASP SER ILE SEQRES 14 A 190 ALA ARG SER GLY VAL ARG VAL HIS PRO SER VAL LEU LYS SEQRES 15 A 190 LEU ALA ARG ARG GLN ALA THR PRO SEQRES 1 B 190 MET PRO SER LEU PRO THR LEU GLN PRO LEU ASP LEU TYR SEQRES 2 B 190 ARG ARG THR LEU ALA CYS LEU VAL LEU ALA VAL SER CYS SEQRES 3 B 190 LEU GLY GLY GLY GLY LEU TRP ALA ASP ASP ALA ARG THR SEQRES 4 B 190 SER ILE GLU GLN ARG SER ASN ALA VAL SER GLN VAL LEU SEQRES 5 B 190 LEU GLY ILE PHE SER TYR VAL ARG TRP PRO LYS GLU PRO SEQRES 6 B 190 ALA VAL LEU GLN LEU CYS VAL VAL GLY PRO THR GLU TYR SEQRES 7 B 190 ALA ASP GLY LEU LEU ARG GLY MET VAL GLN ALA ASN GLY SEQRES 8 B 190 ARG ARG VAL HIS ALA GLU ARG ARG ALA VAL ASP ASN PRO SEQRES 9 B 190 ASP LEU GLY THR LEU CYS ASN VAL ILE TYR LEU GLY VAL SEQRES 10 B 190 VAL ASP GLU ARG GLU ARG GLN GLN VAL PHE ARG SER LEU SEQRES 11 B 190 ALA GLY HIS PRO VAL LEU SER ILE SER GLU ARG GLY THR SEQRES 12 B 190 GLU CYS SER VAL GLY SER MET PHE CYS LEU ASN VAL GLY SEQRES 13 B 190 GLY PRO ARG ILE THR PHE GLU ALA ASN LEU ASP SER ILE SEQRES 14 B 190 ALA ARG SER GLY VAL ARG VAL HIS PRO SER VAL LEU LYS SEQRES 15 B 190 LEU ALA ARG ARG GLN ALA THR PRO HET SO4 A 201 5 HET SO4 A 202 5 HET SO4 B 201 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 3(O4 S 2-) FORMUL 6 HOH *109(H2 O) HELIX 1 AA1 SER A 40 SER A 57 1 18 HELIX 2 AA2 GLY A 81 GLY A 85 5 5 HELIX 3 AA3 ASP A 105 CYS A 110 1 6 HELIX 4 AA4 ASP A 119 ALA A 131 1 13 HELIX 5 AA5 THR A 143 VAL A 147 5 5 HELIX 6 AA6 ASN A 165 ARG A 171 1 7 HELIX 7 AA7 SER A 179 GLN A 187 1 9 HELIX 8 AA8 SER B 40 SER B 57 1 18 HELIX 9 AA9 ALA B 79 ARG B 84 1 6 HELIX 10 AB1 ASP B 105 CYS B 110 1 6 HELIX 11 AB2 ASP B 119 ALA B 131 1 13 HELIX 12 AB3 ASN B 165 ARG B 171 1 7 HELIX 13 AB4 PRO B 178 ALA B 184 5 7 SHEET 1 AA1 2 VAL A 59 ARG A 60 0 SHEET 2 AA1 2 ARG A 175 VAL A 176 -1 O ARG A 175 N ARG A 60 SHEET 1 AA2 7 MET A 86 VAL A 87 0 SHEET 2 AA2 7 ARG A 93 ARG A 99 -1 O VAL A 94 N MET A 86 SHEET 3 AA2 7 VAL A 67 VAL A 73 1 N LEU A 70 O HIS A 95 SHEET 4 AA2 7 VAL A 112 LEU A 115 1 O TYR A 114 N CYS A 71 SHEET 5 AA2 7 LEU A 136 SER A 139 1 O LEU A 136 N ILE A 113 SHEET 6 AA2 7 PHE A 151 VAL A 155 1 O LEU A 153 N SER A 139 SHEET 7 AA2 7 ILE A 160 ALA A 164 -1 O THR A 161 N ASN A 154 SHEET 1 AA3 2 VAL B 59 ARG B 60 0 SHEET 2 AA3 2 ARG B 175 VAL B 176 -1 O ARG B 175 N ARG B 60 SHEET 1 AA4 7 MET B 86 VAL B 87 0 SHEET 2 AA4 7 ARG B 93 ARG B 99 -1 O VAL B 94 N MET B 86 SHEET 3 AA4 7 LEU B 68 VAL B 73 1 N LEU B 70 O HIS B 95 SHEET 4 AA4 7 VAL B 112 LEU B 115 1 O TYR B 114 N CYS B 71 SHEET 5 AA4 7 LEU B 136 SER B 139 1 O ILE B 138 N LEU B 115 SHEET 6 AA4 7 PHE B 151 ASN B 154 1 O LEU B 153 N SER B 139 SHEET 7 AA4 7 THR B 161 ALA B 164 -1 O THR B 161 N ASN B 154 SSBOND 1 CYS A 145 CYS A 152 1555 1555 2.05 CISPEP 1 ALA A 188 THR A 189 0 24.43 SITE 1 AC1 5 ARG A 99 ASN A 103 THR B 39 SER B 40 SITE 2 AC1 5 SO4 B 201 SITE 1 AC2 6 SER A 40 ILE A 41 HOH A 314 ARG B 99 SITE 2 AC2 6 ALA B 100 ASN B 103 SITE 1 AC3 4 ALA A 100 ASN A 103 SO4 A 201 SER B 40 CRYST1 121.268 121.268 85.482 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008246 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008246 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011698 0.00000