HEADER HYDROLASE 27-APR-15 4ZI3 TITLE BART-LIKE DOMAIN OF BARTL1/CCDC104 AA1-133 IN COMPLEX WITH ARL3FL TITLE 2 BOUND TO GPPNHP IN P1 21 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 3; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 36; COMPND 7 CHAIN: C; COMPND 8 FRAGMENT: UNP RESIDUES 1-133; COMPND 9 SYNONYM: COILED-COIL DOMAIN-CONTAINING PROTEIN 104, BARTL1/CCDC104; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 36; COMPND 13 CHAIN: D; COMPND 14 FRAGMENT: UNP RESIDUES 1-133; COMPND 15 SYNONYM: COILED-COIL DOMAIN-CONTAINING PROTEIN 104, BARTL1/CCDC104; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: ARL3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET20; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 12 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 13 ORGANISM_TAXID: 10090; SOURCE 14 GENE: CFAP36, CCDC104; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PGEX4T1 GATEWAY; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 21 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 22 ORGANISM_TAXID: 10090; SOURCE 23 GENE: CFAP36, CCDC104; SOURCE 24 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 26 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 27 EXPRESSION_SYSTEM_PLASMID: PGEX4T1 GATEWAY KEYWDS ARF-LIKE GTPASE, GTP-BINDING, BART-LIKE DOMAIN, CILIA, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.LOKAJ,C.KOERNER,S.KOESLING,A.WITTINGHOFER REVDAT 2 10-JAN-24 4ZI3 1 LINK REVDAT 1 23-MAR-16 4ZI3 0 JRNL AUTH M.LOKAJ,S.K.KOSLING,C.KOERNER,S.M.LANGE,S.E.VAN BEERSUM, JRNL AUTH 2 J.VAN REEUWIJK,R.ROEPMAN,N.HORN,M.UEFFING,K.BOLDT, JRNL AUTH 3 A.WITTINGHOFER JRNL TITL THE INTERACTION OF CCDC104/BARTL1 WITH ARL3 AND IMPLICATIONS JRNL TITL 2 FOR CILIARY FUNCTION. JRNL REF STRUCTURE V. 23 2122 2015 JRNL REFN ISSN 0969-2126 JRNL PMID 26455799 JRNL DOI 10.1016/J.STR.2015.08.016 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 44692 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2235 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.9553 - 5.0314 0.99 2718 144 0.1657 0.1933 REMARK 3 2 5.0314 - 3.9970 0.99 2653 139 0.1536 0.2071 REMARK 3 3 3.9970 - 3.4927 1.00 2672 141 0.1668 0.2544 REMARK 3 4 3.4927 - 3.1738 1.00 2653 140 0.1851 0.2328 REMARK 3 5 3.1738 - 2.9465 1.00 2659 140 0.2093 0.2593 REMARK 3 6 2.9465 - 2.7730 1.00 2683 141 0.2078 0.2393 REMARK 3 7 2.7730 - 2.6342 1.00 2643 139 0.2113 0.2628 REMARK 3 8 2.6342 - 2.5196 1.00 2640 139 0.2108 0.2440 REMARK 3 9 2.5196 - 2.4226 1.00 2636 139 0.1969 0.2929 REMARK 3 10 2.4226 - 2.3391 1.00 2635 138 0.2105 0.2350 REMARK 3 11 2.3391 - 2.2660 1.00 2694 142 0.2047 0.2831 REMARK 3 12 2.2660 - 2.2012 1.00 2618 138 0.2129 0.2696 REMARK 3 13 2.2012 - 2.1433 1.00 2638 139 0.2291 0.3271 REMARK 3 14 2.1433 - 2.0910 1.00 2629 138 0.2470 0.2910 REMARK 3 15 2.0910 - 2.0435 1.00 2645 140 0.2527 0.3358 REMARK 3 16 2.0435 - 2.0000 0.99 2641 138 0.2670 0.2964 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5157 REMARK 3 ANGLE : 1.145 7008 REMARK 3 CHIRALITY : 0.048 792 REMARK 3 PLANARITY : 0.005 899 REMARK 3 DIHEDRAL : 16.397 1964 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZI3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-APR-15. REMARK 100 THE DEPOSITION ID IS D_1000209092. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44692 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 28.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.350 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.24 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.720 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4ZI2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 M LICL, 0.1 M TRIS PH8.5, 20 % PEG REMARK 280 4000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.86000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -66.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ASP A 15 REMARK 465 GLU A 184 REMARK 465 HIS A 185 REMARK 465 HIS A 186 REMARK 465 HIS A 187 REMARK 465 HIS A 188 REMARK 465 HIS A 189 REMARK 465 HIS A 190 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 SER B 12 REMARK 465 ALA B 13 REMARK 465 PRO B 14 REMARK 465 ASP B 15 REMARK 465 GLN B 16 REMARK 465 ASN B 178 REMARK 465 ALA B 179 REMARK 465 LYS B 180 REMARK 465 LYS B 181 REMARK 465 LYS B 182 REMARK 465 LEU B 183 REMARK 465 GLU B 184 REMARK 465 HIS B 185 REMARK 465 HIS B 186 REMARK 465 HIS B 187 REMARK 465 HIS B 188 REMARK 465 HIS B 189 REMARK 465 HIS B 190 REMARK 465 GLY C -1 REMARK 465 PRO C 0 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 ALA C 3 REMARK 465 GLU C 4 REMARK 465 GLU C 5 REMARK 465 GLU C 6 REMARK 465 GLU C 130 REMARK 465 ARG C 131 REMARK 465 ASN C 132 REMARK 465 GLY C 133 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 ARG D 131 REMARK 465 ASN D 132 REMARK 465 GLY D 133 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 250 O HOH C 258 1.97 REMARK 500 O HOH C 256 O HOH C 277 1.99 REMARK 500 OE2 GLU B 113 O HOH B 401 2.00 REMARK 500 O HOH C 251 O HOH D 266 2.05 REMARK 500 O HOH A 407 O HOH D 251 2.05 REMARK 500 O HOH C 263 O HOH C 266 2.06 REMARK 500 O HOH C 269 O HOH C 284 2.07 REMARK 500 O HOH A 474 O HOH A 488 2.10 REMARK 500 O HOH A 461 O HOH A 480 2.14 REMARK 500 OD1 ASP C 31 O HOH C 201 2.15 REMARK 500 O HOH A 441 O HOH A 481 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 485 O HOH A 487 2656 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 161 CB - CG - CD1 ANGL. DEV. = -12.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 118 -1.46 70.05 REMARK 500 GLN B 59 18.89 57.67 REMARK 500 ASP B 96 68.47 -102.08 REMARK 500 PRO B 135 149.23 -39.26 REMARK 500 ALA B 136 -33.83 -39.24 REMARK 500 SER B 137 29.62 -149.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER B 137 GLU B 138 142.09 REMARK 500 GLU B 141 GLY B 142 -137.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 423 DISTANCE = 5.97 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 31 OG1 REMARK 620 2 THR A 48 OG1 85.7 REMARK 620 3 GNP A 301 O3G 178.6 94.9 REMARK 620 4 GNP A 301 O2B 87.9 173.5 91.6 REMARK 620 5 HOH A 429 O 84.9 92.8 96.4 87.1 REMARK 620 6 HOH A 433 O 87.3 91.4 91.4 87.8 170.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 31 OG1 REMARK 620 2 THR B 48 OG1 81.7 REMARK 620 3 GNP B 301 O1G 168.1 86.4 REMARK 620 4 GNP B 301 O1B 86.8 168.4 105.1 REMARK 620 5 HOH B 408 O 81.5 79.3 97.1 97.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 302 DBREF 4ZI3 A 1 182 UNP Q9WUL7 ARL3_MOUSE 1 182 DBREF 4ZI3 B 1 182 UNP Q9WUL7 ARL3_MOUSE 1 182 DBREF 4ZI3 C 1 133 UNP Q8C6E0 CFA36_MOUSE 1 133 DBREF 4ZI3 D 1 133 UNP Q8C6E0 CFA36_MOUSE 1 133 SEQADV 4ZI3 LEU A 183 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI3 GLU A 184 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI3 HIS A 185 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI3 HIS A 186 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI3 HIS A 187 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI3 HIS A 188 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI3 HIS A 189 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI3 HIS A 190 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI3 LEU B 183 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI3 GLU B 184 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI3 HIS B 185 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI3 HIS B 186 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI3 HIS B 187 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI3 HIS B 188 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI3 HIS B 189 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI3 HIS B 190 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI3 GLY C -1 UNP Q8C6E0 EXPRESSION TAG SEQADV 4ZI3 PRO C 0 UNP Q8C6E0 EXPRESSION TAG SEQRES 1 A 190 MET GLY LEU LEU SER ILE LEU ARG LYS LEU LYS SER ALA SEQRES 2 A 190 PRO ASP GLN GLU VAL ARG ILE LEU LEU LEU GLY LEU ASP SEQRES 3 A 190 ASN ALA GLY LYS THR THR LEU LEU LYS GLN LEU ALA SER SEQRES 4 A 190 GLU ASP ILE SER HIS ILE THR PRO THR GLN GLY PHE ASN SEQRES 5 A 190 ILE LYS SER VAL GLN SER GLN GLY PHE LYS LEU ASN VAL SEQRES 6 A 190 TRP ASP ILE GLY GLY GLN ARG LYS ILE ARG PRO TYR TRP SEQRES 7 A 190 ARG SER TYR PHE GLU ASN THR ASP ILE LEU ILE TYR VAL SEQRES 8 A 190 ILE ASP SER ALA ASP ARG LYS ARG PHE GLU GLU THR GLY SEQRES 9 A 190 GLN GLU LEU THR GLU LEU LEU GLU GLU GLU LYS LEU SER SEQRES 10 A 190 CYS VAL PRO VAL LEU ILE PHE ALA ASN LYS GLN ASP LEU SEQRES 11 A 190 LEU THR ALA ALA PRO ALA SER GLU ILE ALA GLU GLY LEU SEQRES 12 A 190 ASN LEU HIS THR ILE ARG ASP ARG VAL TRP GLN ILE GLN SEQRES 13 A 190 SER CYS SER ALA LEU THR GLY GLU GLY VAL GLN ASP GLY SEQRES 14 A 190 MET ASN TRP VAL CYS LYS ASN VAL ASN ALA LYS LYS LYS SEQRES 15 A 190 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 190 MET GLY LEU LEU SER ILE LEU ARG LYS LEU LYS SER ALA SEQRES 2 B 190 PRO ASP GLN GLU VAL ARG ILE LEU LEU LEU GLY LEU ASP SEQRES 3 B 190 ASN ALA GLY LYS THR THR LEU LEU LYS GLN LEU ALA SER SEQRES 4 B 190 GLU ASP ILE SER HIS ILE THR PRO THR GLN GLY PHE ASN SEQRES 5 B 190 ILE LYS SER VAL GLN SER GLN GLY PHE LYS LEU ASN VAL SEQRES 6 B 190 TRP ASP ILE GLY GLY GLN ARG LYS ILE ARG PRO TYR TRP SEQRES 7 B 190 ARG SER TYR PHE GLU ASN THR ASP ILE LEU ILE TYR VAL SEQRES 8 B 190 ILE ASP SER ALA ASP ARG LYS ARG PHE GLU GLU THR GLY SEQRES 9 B 190 GLN GLU LEU THR GLU LEU LEU GLU GLU GLU LYS LEU SER SEQRES 10 B 190 CYS VAL PRO VAL LEU ILE PHE ALA ASN LYS GLN ASP LEU SEQRES 11 B 190 LEU THR ALA ALA PRO ALA SER GLU ILE ALA GLU GLY LEU SEQRES 12 B 190 ASN LEU HIS THR ILE ARG ASP ARG VAL TRP GLN ILE GLN SEQRES 13 B 190 SER CYS SER ALA LEU THR GLY GLU GLY VAL GLN ASP GLY SEQRES 14 B 190 MET ASN TRP VAL CYS LYS ASN VAL ASN ALA LYS LYS LYS SEQRES 15 B 190 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 135 GLY PRO MET ALA ALA GLU GLU GLU ASP GLU VAL GLU TRP SEQRES 2 C 135 VAL VAL GLU SER ILE ALA GLY PHE LEU ARG GLY PRO ASP SEQRES 3 C 135 TRP SER ILE PRO ILE LEU ASP PHE VAL GLU GLN LYS CYS SEQRES 4 C 135 GLU VAL PHE ASP ASP GLU GLU GLU SER LYS LEU THR TYR SEQRES 5 C 135 THR GLU ILE HIS GLN GLU TYR LYS GLU LEU VAL GLU LYS SEQRES 6 C 135 LEU LEU GLU SER TYR LEU LYS GLU ILE GLY ILE ASN GLU SEQRES 7 C 135 ASP GLN PHE GLN GLU ALA CYS THR SER PRO LEU ALA LYS SEQRES 8 C 135 THR ARG THR SER GLN ALA ILE LEU GLN PRO VAL LEU ALA SEQRES 9 C 135 ALA GLU ASP PHE THR ILE PHE LYS ALA MET MET VAL GLN SEQRES 10 C 135 LYS ASN ILE GLU MET GLN LEU GLN ALA ILE ARG ILE ILE SEQRES 11 C 135 GLN GLU ARG ASN GLY SEQRES 1 D 133 MET ALA ALA GLU GLU GLU ASP GLU VAL GLU TRP VAL VAL SEQRES 2 D 133 GLU SER ILE ALA GLY PHE LEU ARG GLY PRO ASP TRP SER SEQRES 3 D 133 ILE PRO ILE LEU ASP PHE VAL GLU GLN LYS CYS GLU VAL SEQRES 4 D 133 PHE ASP ASP GLU GLU GLU SER LYS LEU THR TYR THR GLU SEQRES 5 D 133 ILE HIS GLN GLU TYR LYS GLU LEU VAL GLU LYS LEU LEU SEQRES 6 D 133 GLU SER TYR LEU LYS GLU ILE GLY ILE ASN GLU ASP GLN SEQRES 7 D 133 PHE GLN GLU ALA CYS THR SER PRO LEU ALA LYS THR ARG SEQRES 8 D 133 THR SER GLN ALA ILE LEU GLN PRO VAL LEU ALA ALA GLU SEQRES 9 D 133 ASP PHE THR ILE PHE LYS ALA MET MET VAL GLN LYS ASN SEQRES 10 D 133 ILE GLU MET GLN LEU GLN ALA ILE ARG ILE ILE GLN GLU SEQRES 11 D 133 ARG ASN GLY HET GNP A 301 32 HET MG A 302 1 HET GNP B 301 32 HET MG B 302 1 HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM MG MAGNESIUM ION FORMUL 5 GNP 2(C10 H17 N6 O13 P3) FORMUL 6 MG 2(MG 2+) FORMUL 9 HOH *274(H2 O) HELIX 1 AA1 LEU A 4 LYS A 11 5 8 HELIX 2 AA2 GLY A 29 ALA A 38 1 10 HELIX 3 AA3 GLN A 71 PHE A 82 5 12 HELIX 4 AA4 ASP A 96 LYS A 98 5 3 HELIX 5 AA5 ARG A 99 GLU A 113 1 15 HELIX 6 AA6 GLU A 114 SER A 117 5 4 HELIX 7 AA7 PRO A 135 LEU A 143 1 9 HELIX 8 AA8 ASN A 144 ILE A 148 5 5 HELIX 9 AA9 GLY A 165 LYS A 175 1 11 HELIX 10 AB1 ASN A 178 LEU A 183 1 6 HELIX 11 AB2 SER B 5 LYS B 11 5 7 HELIX 12 AB3 GLY B 29 ALA B 38 1 10 HELIX 13 AB4 GLN B 71 PHE B 82 5 12 HELIX 14 AB5 ASP B 96 LYS B 98 5 3 HELIX 15 AB6 ARG B 99 GLU B 113 1 15 HELIX 16 AB7 GLU B 114 SER B 117 5 4 HELIX 17 AB8 ASN B 144 ILE B 148 5 5 HELIX 18 AB9 GLY B 165 ASN B 176 1 12 HELIX 19 AC1 GLU C 8 GLY C 22 1 15 HELIX 20 AC2 GLY C 22 CYS C 37 1 16 HELIX 21 AC3 GLU C 38 PHE C 40 5 3 HELIX 22 AC4 LYS C 47 GLY C 73 1 27 HELIX 23 AC5 ASN C 75 SER C 85 1 11 HELIX 24 AC6 PRO C 86 THR C 92 1 7 HELIX 25 AC7 SER C 93 ASP C 105 1 13 HELIX 26 AC8 ASP C 105 GLN C 129 1 25 HELIX 27 AC9 GLU D 4 GLY D 22 1 19 HELIX 28 AD1 GLY D 22 CYS D 37 1 16 HELIX 29 AD2 GLU D 38 PHE D 40 5 3 HELIX 30 AD3 LYS D 47 GLY D 73 1 27 HELIX 31 AD4 ASN D 75 SER D 85 1 11 HELIX 32 AD5 PRO D 86 ARG D 91 1 6 HELIX 33 AD6 SER D 93 ASP D 105 1 13 HELIX 34 AD7 ASP D 105 GLN D 129 1 25 SHEET 1 AA1 6 PHE A 51 SER A 58 0 SHEET 2 AA1 6 PHE A 61 ILE A 68 -1 O ASP A 67 N ASN A 52 SHEET 3 AA1 6 GLU A 17 LEU A 23 1 N VAL A 18 O ASN A 64 SHEET 4 AA1 6 ILE A 87 ASP A 93 1 O VAL A 91 N LEU A 23 SHEET 5 AA1 6 VAL A 121 ASN A 126 1 O LEU A 122 N TYR A 90 SHEET 6 AA1 6 TRP A 153 SER A 157 1 O GLN A 154 N ILE A 123 SHEET 1 AA2 6 PHE B 51 SER B 58 0 SHEET 2 AA2 6 PHE B 61 ILE B 68 -1 O ASP B 67 N ASN B 52 SHEET 3 AA2 6 VAL B 18 GLY B 24 1 N ILE B 20 O ASN B 64 SHEET 4 AA2 6 ILE B 87 ASP B 93 1 O ILE B 89 N LEU B 21 SHEET 5 AA2 6 VAL B 121 ASN B 126 1 O LEU B 122 N TYR B 90 SHEET 6 AA2 6 TRP B 153 SER B 157 1 O GLN B 156 N ILE B 123 LINK OG1 THR A 31 MG MG A 302 1555 1555 2.15 LINK OG1 THR A 48 MG MG A 302 1555 1555 2.06 LINK O3G GNP A 301 MG MG A 302 1555 1555 2.00 LINK O2B GNP A 301 MG MG A 302 1555 1555 2.14 LINK MG MG A 302 O HOH A 429 1555 1555 2.06 LINK MG MG A 302 O HOH A 433 1555 1555 2.10 LINK OG1 THR B 31 MG MG B 302 1555 1555 2.19 LINK OG1 THR B 48 MG MG B 302 1555 1555 2.09 LINK O1G GNP B 301 MG MG B 302 1555 1555 2.00 LINK O1B GNP B 301 MG MG B 302 1555 1555 1.96 LINK MG MG B 302 O HOH B 408 1555 1555 1.89 SITE 1 AC1 23 ASP A 26 ASN A 27 ALA A 28 GLY A 29 SITE 2 AC1 23 LYS A 30 THR A 31 THR A 32 ILE A 45 SITE 3 AC1 23 THR A 48 GLY A 70 ASN A 126 LYS A 127 SITE 4 AC1 23 ASP A 129 LEU A 130 SER A 159 ALA A 160 SITE 5 AC1 23 LEU A 161 MG A 302 HOH A 414 HOH A 419 SITE 6 AC1 23 HOH A 429 HOH A 430 HOH A 433 SITE 1 AC2 5 THR A 31 THR A 48 GNP A 301 HOH A 429 SITE 2 AC2 5 HOH A 433 SITE 1 AC3 21 ASP B 26 ASN B 27 ALA B 28 GLY B 29 SITE 2 AC3 21 LYS B 30 THR B 31 THR B 32 ILE B 45 SITE 3 AC3 21 PRO B 47 THR B 48 GLY B 70 ASN B 126 SITE 4 AC3 21 LYS B 127 ASP B 129 ALA B 160 LEU B 161 SITE 5 AC3 21 MG B 302 HOH B 405 HOH B 408 HOH B 410 SITE 6 AC3 21 HOH B 416 SITE 1 AC4 4 THR B 31 THR B 48 GNP B 301 HOH B 408 CRYST1 51.550 67.720 98.470 90.00 102.65 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019399 0.000000 0.004353 0.00000 SCALE2 0.000000 0.014767 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010408 0.00000