HEADER UNKNOWN FUNCTION 30-APR-15 4ZKJ TITLE CRYSTAL STRUCTURE OF CRISPR-ASSOCIATED PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CRISPR-ASSOCIATED PROTEIN CAS1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 2-289; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PYOGENES M1 476; SOURCE 3 ORGANISM_TAXID: 1207470; SOURCE 4 GENE: CAS1, M1GAS476_0831; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CRISPR, CAS, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR D.KA,E.BAE REVDAT 2 20-JAN-16 4ZKJ 1 JRNL REVDAT 1 13-JAN-16 4ZKJ 0 JRNL AUTH D.KA,H.LEE,Y.D.JUNG,K.KIM,C.SEOK,N.SUH,E.BAE JRNL TITL CRYSTAL STRUCTURE OF STREPTOCOCCUS PYOGENES CAS1 AND ITS JRNL TITL 2 INTERACTION WITH CSN2 IN THE TYPE II CRISPR-CAS SYSTEM JRNL REF STRUCTURE V. 24 70 2016 JRNL REFN ISSN 0969-2126 JRNL PMID 26671707 JRNL DOI 10.1016/J.STR.2015.10.019 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.14 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 546373 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1961 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3446 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 133 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4657 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 249 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.37000 REMARK 3 B22 (A**2) : 0.37000 REMARK 3 B33 (A**2) : -1.19000 REMARK 3 B12 (A**2) : 0.18000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.169 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.152 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.112 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.429 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4793 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4570 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6467 ; 1.760 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10506 ; 2.429 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 570 ; 5.910 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 229 ;38.251 ;24.279 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 794 ;13.311 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;18.823 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 719 ; 0.109 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5347 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1150 ; 0.011 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2289 ; 3.921 ; 4.611 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2288 ; 3.900 ; 4.610 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2856 ; 5.341 ; 6.898 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2857 ; 5.342 ; 6.899 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2504 ; 5.660 ; 5.212 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2504 ; 5.660 ; 5.212 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3612 ; 8.144 ; 7.566 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5585 ; 9.834 ;37.957 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5520 ; 9.841 ;37.819 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 2 289 B 2 289 16250 0.19 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 83 REMARK 3 RESIDUE RANGE : A 88 A 289 REMARK 3 ORIGIN FOR THE GROUP (A): 65.4772 55.5984 76.4031 REMARK 3 T TENSOR REMARK 3 T11: 0.1226 T22: 0.2674 REMARK 3 T33: 0.3527 T12: 0.0182 REMARK 3 T13: 0.0340 T23: -0.1172 REMARK 3 L TENSOR REMARK 3 L11: 0.1796 L22: 0.2957 REMARK 3 L33: 0.1202 L12: -0.1908 REMARK 3 L13: -0.0524 L23: 0.1028 REMARK 3 S TENSOR REMARK 3 S11: -0.0444 S12: 0.0108 S13: -0.1013 REMARK 3 S21: 0.0169 S22: 0.0965 S23: -0.0387 REMARK 3 S31: -0.0891 S32: -0.0177 S33: -0.0521 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 289 REMARK 3 ORIGIN FOR THE GROUP (A): 52.4306 49.1698 95.2881 REMARK 3 T TENSOR REMARK 3 T11: 0.1358 T22: 0.3140 REMARK 3 T33: 0.2961 T12: 0.0584 REMARK 3 T13: 0.0370 T23: 0.0184 REMARK 3 L TENSOR REMARK 3 L11: 0.0448 L22: 0.4500 REMARK 3 L33: 0.2777 L12: -0.1126 REMARK 3 L13: -0.0148 L23: 0.1291 REMARK 3 S TENSOR REMARK 3 S11: -0.0421 S12: -0.0454 S13: -0.0700 REMARK 3 S21: 0.1203 S22: 0.0750 S23: 0.0153 REMARK 3 S31: -0.0310 S32: -0.0581 S33: -0.0329 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 401 A 494 REMARK 3 ORIGIN FOR THE GROUP (A): 66.768 52.192 74.968 REMARK 3 T TENSOR REMARK 3 T11: 0.1051 T22: 0.2634 REMARK 3 T33: 0.3195 T12: 0.0338 REMARK 3 T13: 0.0161 T23: -0.0709 REMARK 3 L TENSOR REMARK 3 L11: 0.1122 L22: 0.2859 REMARK 3 L33: 0.1658 L12: -0.0735 REMARK 3 L13: -0.0387 L23: 0.0974 REMARK 3 S TENSOR REMARK 3 S11: -0.0298 S12: 0.0275 S13: -0.1137 REMARK 3 S21: 0.0579 S22: 0.0666 S23: -0.0315 REMARK 3 S31: -0.0827 S32: -0.0432 S33: -0.0368 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 301 A 302 REMARK 3 RESIDUE RANGE : B 301 B 304 REMARK 3 ORIGIN FOR THE GROUP (A): 61.6930 43.4757 82.8998 REMARK 3 T TENSOR REMARK 3 T11: 0.2324 T22: 0.4604 REMARK 3 T33: 0.0650 T12: -0.1728 REMARK 3 T13: 0.0337 T23: 0.0970 REMARK 3 L TENSOR REMARK 3 L11: 1.5299 L22: 1.7196 REMARK 3 L33: 0.3406 L12: -1.6149 REMARK 3 L13: -0.7198 L23: 0.7652 REMARK 3 S TENSOR REMARK 3 S11: -0.4146 S12: -0.2054 S13: -0.2451 REMARK 3 S21: 0.3943 S22: 0.2963 S23: 0.2705 REMARK 3 S31: 0.1792 S32: 0.1258 S33: 0.1182 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4ZKJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000208833. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 579520 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 10.90 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.2500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 11.20 REMARK 200 R MERGE FOR SHELL (I) : 0.65700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.970 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.6/0.6M NA/KH2PO4, 27% (W/V) GLYCEROL REMARK 280 AND 130 MM HEPES PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.28100 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 140.56200 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 140.56200 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 70.28100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 ARG A 84 REMARK 465 HIS A 85 REMARK 465 ASP A 86 REMARK 465 SER A 87 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 MSE B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 5 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG B 234 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 10 24.67 -148.51 REMARK 500 ASN A 20 18.12 59.85 REMARK 500 THR A 75 -18.23 -141.43 REMARK 500 LYS A 204 -52.81 -140.89 REMARK 500 SER A 250 -7.02 -148.40 REMARK 500 TRP B 4 124.31 48.76 REMARK 500 ASN B 10 25.48 -148.10 REMARK 500 ASN B 19 58.05 37.64 REMARK 500 ASN B 20 19.96 59.32 REMARK 500 ASP B 69 -154.75 -88.56 REMARK 500 ASP B 144 62.53 37.26 REMARK 500 LYS B 204 -54.43 -134.99 REMARK 500 ALA B 206 -17.88 -143.07 REMARK 500 SER B 250 24.51 -144.94 REMARK 500 ASN B 279 50.46 -116.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 304 DBREF 4ZKJ A 2 289 UNP J7M1H5 J7M1H5_STRP1 2 289 DBREF 4ZKJ B 2 289 UNP J7M1H5 J7M1H5_STRP1 2 289 SEQADV 4ZKJ GLY A -1 UNP J7M1H5 EXPRESSION TAG SEQADV 4ZKJ HIS A 0 UNP J7M1H5 EXPRESSION TAG SEQADV 4ZKJ MSE A 1 UNP J7M1H5 EXPRESSION TAG SEQADV 4ZKJ GLY B -1 UNP J7M1H5 EXPRESSION TAG SEQADV 4ZKJ HIS B 0 UNP J7M1H5 EXPRESSION TAG SEQADV 4ZKJ MSE B 1 UNP J7M1H5 EXPRESSION TAG SEQRES 1 A 291 GLY HIS MSE ALA GLY TRP ARG THR VAL VAL VAL ASN THR SEQRES 2 A 291 HIS SER LYS LEU SER TYR LYS ASN ASN HIS LEU ILE PHE SEQRES 3 A 291 LYS ASP ALA TYR LYS THR GLU LEU ILE HIS LEU SER GLU SEQRES 4 A 291 ILE ASP ILE LEU LEU LEU GLU THR THR ASP ILE VAL LEU SEQRES 5 A 291 SER THR MSE LEU VAL LYS ARG LEU VAL ASP GLU ASN VAL SEQRES 6 A 291 LEU VAL ILE PHE CYS ASP ASP LYS ARG LEU PRO THR ALA SEQRES 7 A 291 MSE LEU MSE PRO PHE TYR GLY ARG HIS ASP SER SER LEU SEQRES 8 A 291 GLN LEU GLY LYS GLN MSE SER TRP SER GLU THR VAL LYS SEQRES 9 A 291 SER GLN VAL TRP THR THR ILE ILE ALA GLN LYS ILE LEU SEQRES 10 A 291 ASN GLN SER CYS TYR LEU GLY ALA CYS SER TYR PHE GLU SEQRES 11 A 291 LYS SER GLN SER ILE MSE ASP LEU TYR HIS GLY LEU GLU SEQRES 12 A 291 ASN PHE ASP PRO SER ASN ARG GLU GLY HIS ALA ALA ARG SEQRES 13 A 291 ILE TYR PHE ASN THR LEU PHE GLY ASN ASP PHE SER ARG SEQRES 14 A 291 ASP LEU GLU HIS PRO ILE ASN ALA GLY LEU ASP TYR GLY SEQRES 15 A 291 TYR THR LEU LEU LEU SER MSE PHE ALA ARG GLU VAL VAL SEQRES 16 A 291 VAL SER GLY CYS MSE THR GLN PHE GLY LEU LYS HIS ALA SEQRES 17 A 291 ASN GLN PHE ASN GLN PHE ASN PHE ALA SER ASP ILE MSE SEQRES 18 A 291 GLU PRO PHE ARG PRO LEU VAL ASP LYS ILE VAL TYR GLU SEQRES 19 A 291 ASN ARG ASN GLN PRO PHE PRO LYS ILE LYS ARG GLU LEU SEQRES 20 A 291 PHE THR LEU PHE SER ASP THR PHE SER TYR ASN GLY LYS SEQRES 21 A 291 GLU MSE TYR LEU THR ASN ILE ILE SER ASP TYR THR LYS SEQRES 22 A 291 LYS VAL VAL LYS ALA LEU ASN ASN GLU GLY LYS GLY VAL SEQRES 23 A 291 PRO GLU PHE ARG ILE SEQRES 1 B 291 GLY HIS MSE ALA GLY TRP ARG THR VAL VAL VAL ASN THR SEQRES 2 B 291 HIS SER LYS LEU SER TYR LYS ASN ASN HIS LEU ILE PHE SEQRES 3 B 291 LYS ASP ALA TYR LYS THR GLU LEU ILE HIS LEU SER GLU SEQRES 4 B 291 ILE ASP ILE LEU LEU LEU GLU THR THR ASP ILE VAL LEU SEQRES 5 B 291 SER THR MSE LEU VAL LYS ARG LEU VAL ASP GLU ASN VAL SEQRES 6 B 291 LEU VAL ILE PHE CYS ASP ASP LYS ARG LEU PRO THR ALA SEQRES 7 B 291 MSE LEU MSE PRO PHE TYR GLY ARG HIS ASP SER SER LEU SEQRES 8 B 291 GLN LEU GLY LYS GLN MSE SER TRP SER GLU THR VAL LYS SEQRES 9 B 291 SER GLN VAL TRP THR THR ILE ILE ALA GLN LYS ILE LEU SEQRES 10 B 291 ASN GLN SER CYS TYR LEU GLY ALA CYS SER TYR PHE GLU SEQRES 11 B 291 LYS SER GLN SER ILE MSE ASP LEU TYR HIS GLY LEU GLU SEQRES 12 B 291 ASN PHE ASP PRO SER ASN ARG GLU GLY HIS ALA ALA ARG SEQRES 13 B 291 ILE TYR PHE ASN THR LEU PHE GLY ASN ASP PHE SER ARG SEQRES 14 B 291 ASP LEU GLU HIS PRO ILE ASN ALA GLY LEU ASP TYR GLY SEQRES 15 B 291 TYR THR LEU LEU LEU SER MSE PHE ALA ARG GLU VAL VAL SEQRES 16 B 291 VAL SER GLY CYS MSE THR GLN PHE GLY LEU LYS HIS ALA SEQRES 17 B 291 ASN GLN PHE ASN GLN PHE ASN PHE ALA SER ASP ILE MSE SEQRES 18 B 291 GLU PRO PHE ARG PRO LEU VAL ASP LYS ILE VAL TYR GLU SEQRES 19 B 291 ASN ARG ASN GLN PRO PHE PRO LYS ILE LYS ARG GLU LEU SEQRES 20 B 291 PHE THR LEU PHE SER ASP THR PHE SER TYR ASN GLY LYS SEQRES 21 B 291 GLU MSE TYR LEU THR ASN ILE ILE SER ASP TYR THR LYS SEQRES 22 B 291 LYS VAL VAL LYS ALA LEU ASN ASN GLU GLY LYS GLY VAL SEQRES 23 B 291 PRO GLU PHE ARG ILE MODRES 4ZKJ MSE A 53 MET MODIFIED RESIDUE MODRES 4ZKJ MSE A 77 MET MODIFIED RESIDUE MODRES 4ZKJ MSE A 79 MET MODIFIED RESIDUE MODRES 4ZKJ MSE A 95 MET MODIFIED RESIDUE MODRES 4ZKJ MSE A 134 MET MODIFIED RESIDUE MODRES 4ZKJ MSE A 187 MET MODIFIED RESIDUE MODRES 4ZKJ MSE A 198 MET MODIFIED RESIDUE MODRES 4ZKJ MSE A 219 MET MODIFIED RESIDUE MODRES 4ZKJ MSE A 260 MET MODIFIED RESIDUE MODRES 4ZKJ MSE B 53 MET MODIFIED RESIDUE MODRES 4ZKJ MSE B 77 MET MODIFIED RESIDUE MODRES 4ZKJ MSE B 79 MET MODIFIED RESIDUE MODRES 4ZKJ MSE B 95 MET MODIFIED RESIDUE MODRES 4ZKJ MSE B 134 MET MODIFIED RESIDUE MODRES 4ZKJ MSE B 187 MET MODIFIED RESIDUE MODRES 4ZKJ MSE B 198 MET MODIFIED RESIDUE MODRES 4ZKJ MSE B 219 MET MODIFIED RESIDUE MODRES 4ZKJ MSE B 260 MET MODIFIED RESIDUE HET MSE A 1 8 HET MSE A 53 8 HET MSE A 77 8 HET MSE A 79 8 HET MSE A 95 8 HET MSE A 134 8 HET MSE A 187 8 HET MSE A 198 8 HET MSE A 219 8 HET MSE A 260 8 HET MSE B 53 8 HET MSE B 77 8 HET MSE B 79 8 HET MSE B 95 8 HET MSE B 134 8 HET MSE B 187 8 HET MSE B 198 8 HET MSE B 219 8 HET MSE B 260 8 HET GOL A 301 6 HET GOL A 302 6 HET GOL B 301 6 HET GOL B 302 6 HET GOL B 303 6 HET GOL B 304 6 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 19(C5 H11 N O2 SE) FORMUL 3 GOL 6(C3 H8 O3) FORMUL 9 HOH *249(H2 O) HELIX 1 AA1 SER A 36 ILE A 38 5 3 HELIX 2 AA2 THR A 52 GLU A 61 1 10 HELIX 3 AA3 LEU A 89 SER A 96 1 8 HELIX 4 AA4 SER A 98 CYS A 124 1 27 HELIX 5 AA5 TYR A 126 LEU A 140 1 15 HELIX 6 AA6 ASN A 147 GLY A 162 1 16 HELIX 7 AA7 ASP A 164 ASP A 168 5 5 HELIX 8 AA8 PRO A 172 GLY A 196 1 25 HELIX 9 AA9 PHE A 212 MSE A 219 1 8 HELIX 10 AB1 PHE A 222 ASN A 233 1 12 HELIX 11 AB2 PRO A 237 THR A 247 1 11 HELIX 12 AB3 LEU A 248 SER A 250 5 3 HELIX 13 AB4 LEU A 262 ASN A 279 1 18 HELIX 14 AB5 SER B 36 ILE B 38 5 3 HELIX 15 AB6 THR B 52 GLU B 61 1 10 HELIX 16 AB7 SER B 88 TRP B 97 1 10 HELIX 17 AB8 SER B 98 CYS B 124 1 27 HELIX 18 AB9 TYR B 126 LEU B 140 1 15 HELIX 19 AC1 ASN B 147 GLY B 162 1 16 HELIX 20 AC2 ASN B 163 LEU B 169 1 7 HELIX 21 AC3 PRO B 172 GLY B 196 1 25 HELIX 22 AC4 PHE B 212 GLU B 220 1 9 HELIX 23 AC5 PHE B 222 ASN B 233 1 12 HELIX 24 AC6 PRO B 237 THR B 247 1 11 HELIX 25 AC7 LEU B 248 SER B 250 5 3 HELIX 26 AC8 LEU B 262 ASN B 279 1 18 SHEET 1 AA1 8 THR A 6 VAL A 9 0 SHEET 2 AA1 8 ILE A 40 LEU A 43 1 O LEU A 42 N VAL A 7 SHEET 3 AA1 8 LEU A 64 CYS A 68 1 O LEU A 64 N LEU A 41 SHEET 4 AA1 8 PRO A 74 PRO A 80 -1 O ALA A 76 N PHE A 67 SHEET 5 AA1 8 PRO B 74 PRO B 80 -1 O MSE B 79 N MSE A 77 SHEET 6 AA1 8 LEU B 64 CYS B 68 -1 N PHE B 67 O ALA B 76 SHEET 7 AA1 8 ILE B 40 LEU B 43 1 N LEU B 43 O ILE B 66 SHEET 8 AA1 8 THR B 6 VAL B 9 1 N VAL B 7 O LEU B 42 SHEET 1 AA2 8 THR A 30 HIS A 34 0 SHEET 2 AA2 8 HIS A 21 LYS A 25 -1 N PHE A 24 O GLU A 31 SHEET 3 AA2 8 SER A 13 LYS A 18 -1 N SER A 16 O ILE A 23 SHEET 4 AA2 8 ILE A 48 SER A 51 1 O VAL A 49 N LEU A 15 SHEET 5 AA2 8 ILE B 48 SER B 51 -1 O LEU B 50 N LEU A 50 SHEET 6 AA2 8 SER B 13 LYS B 18 1 N LEU B 15 O VAL B 49 SHEET 7 AA2 8 HIS B 21 LYS B 25 -1 O ILE B 23 N SER B 16 SHEET 8 AA2 8 THR B 30 HIS B 34 -1 O ILE B 33 N LEU B 22 SHEET 1 AA3 2 THR A 252 TYR A 255 0 SHEET 2 AA3 2 LYS A 258 TYR A 261 -1 O MSE A 260 N PHE A 253 SHEET 1 AA4 2 THR B 252 TYR B 255 0 SHEET 2 AA4 2 LYS B 258 TYR B 261 -1 O MSE B 260 N PHE B 253 LINK C MSE A 1 N ALA A 2 1555 1555 1.33 LINK C THR A 52 N MSE A 53 1555 1555 1.32 LINK C MSE A 53 N LEU A 54 1555 1555 1.32 LINK C ALA A 76 N MSE A 77 1555 1555 1.32 LINK C MSE A 77 N LEU A 78 1555 1555 1.34 LINK C LEU A 78 N MSE A 79 1555 1555 1.32 LINK C MSE A 79 N PRO A 80 1555 1555 1.33 LINK C GLN A 94 N MSE A 95 1555 1555 1.33 LINK C MSE A 95 N SER A 96 1555 1555 1.31 LINK C ILE A 133 N MSE A 134 1555 1555 1.34 LINK C MSE A 134 N ASP A 135 1555 1555 1.33 LINK C SER A 186 N MSE A 187 1555 1555 1.32 LINK C MSE A 187 N PHE A 188 1555 1555 1.33 LINK C CYS A 197 N MSE A 198 1555 1555 1.32 LINK C MSE A 198 N THR A 199 1555 1555 1.30 LINK C ILE A 218 N MSE A 219 1555 1555 1.31 LINK C MSE A 219 N GLU A 220 1555 1555 1.31 LINK C GLU A 259 N MSE A 260 1555 1555 1.32 LINK C MSE A 260 N TYR A 261 1555 1555 1.32 LINK C THR B 52 N MSE B 53 1555 1555 1.32 LINK C MSE B 53 N LEU B 54 1555 1555 1.36 LINK C ALA B 76 N MSE B 77 1555 1555 1.31 LINK C MSE B 77 N LEU B 78 1555 1555 1.32 LINK C LEU B 78 N MSE B 79 1555 1555 1.31 LINK C MSE B 79 N PRO B 80 1555 1555 1.35 LINK C GLN B 94 N MSE B 95 1555 1555 1.33 LINK C MSE B 95 N SER B 96 1555 1555 1.33 LINK C ILE B 133 N MSE B 134 1555 1555 1.32 LINK C MSE B 134 N ASP B 135 1555 1555 1.33 LINK C SER B 186 N MSE B 187 1555 1555 1.32 LINK C MSE B 187 N PHE B 188 1555 1555 1.32 LINK C CYS B 197 N MSE B 198 1555 1555 1.33 LINK C MSE B 198 N THR B 199 1555 1555 1.33 LINK C ILE B 218 N MSE B 219 1555 1555 1.33 LINK C MSE B 219 N GLU B 220 1555 1555 1.32 LINK C GLU B 259 N MSE B 260 1555 1555 1.33 LINK C MSE B 260 N TYR B 261 1555 1555 1.32 SITE 1 AC1 3 LYS A 93 ASN A 278 HOH A 451 SITE 1 AC2 8 SER A 166 HIS A 171 PRO A 172 ILE A 173 SITE 2 AC2 8 ASN A 174 ALA A 175 HOH A 415 MSE B 95 SITE 1 AC3 6 PHE B 157 ARG B 167 ASN B 174 LEU B 177 SITE 2 AC3 6 HOH B 438 HOH B 463 SITE 1 AC4 5 LYS B 102 GLY B 202 LEU B 203 LYS B 204 SITE 2 AC4 5 HOH B 406 SITE 1 AC5 3 ASN B 158 ASP B 164 ARG B 167 SITE 1 AC6 4 ASP A 178 GLN B 200 GLN B 208 ASN B 210 CRYST1 95.205 95.205 210.843 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010504 0.006064 0.000000 0.00000 SCALE2 0.000000 0.012129 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004743 0.00000 HETATM 1 N MSE A 1 65.532 67.673 72.826 1.00104.14 N ANISOU 1 N MSE A 1 12346 13368 13854 144 428 -1190 N HETATM 2 CA MSE A 1 65.868 68.955 72.222 1.00108.84 C ANISOU 2 CA MSE A 1 12986 13951 14417 130 448 -1200 C HETATM 3 C MSE A 1 65.727 68.867 70.716 1.00113.58 C ANISOU 3 C MSE A 1 13591 14557 15006 108 469 -1212 C HETATM 4 O MSE A 1 64.923 69.605 70.097 1.00100.78 O ANISOU 4 O MSE A 1 12006 12944 13341 119 479 -1195 O HETATM 5 CB MSE A 1 67.312 69.249 72.589 1.00117.78 C ANISOU 5 CB MSE A 1 14115 15058 15576 106 452 -1234 C HETATM 6 CG MSE A 1 67.482 69.653 74.039 1.00126.39 C ANISOU 6 CG MSE A 1 15213 16140 16667 132 432 -1224 C HETATM 7 SE MSE A 1 66.929 71.524 74.064 1.00169.50 SE ANISOU 7 SE MSE A 1 20743 21591 22065 150 445 -1203 SE HETATM 8 CE MSE A 1 67.134 72.129 75.930 1.00134.76 C ANISOU 8 CE MSE A 1 16356 17181 17663 186 417 -1192 C