HEADER RNA BINDING PROTEIN 01-MAY-15 4ZLC TITLE CRYSTAL STRUCTURE OF THE ROQ DOMAIN OF HUMAN ROQUIN-2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ROQUIN-2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 171-325; COMPND 5 SYNONYM: MEMBRANE-ASSOCIATED NUCLEIC ACID-BINDING PROTEIN,RING FINGER COMPND 6 AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 2,RING FINGER COMPND 7 PROTEIN 164; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RC3H2, MNAB, RNF164; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX6P-1 KEYWDS RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.SAKURAI,U.OHTO,T.SHIMIZU REVDAT 3 20-MAR-24 4ZLC 1 REMARK REVDAT 2 19-FEB-20 4ZLC 1 REMARK REVDAT 1 19-AUG-15 4ZLC 0 JRNL AUTH S.SAKURAI,U.OHTO,T.SHIMIZU JRNL TITL STRUCTURE OF HUMAN ROQUIN-2 AND ITS COMPLEX WITH JRNL TITL 2 CONSTITUTIVE-DECAY ELEMENT RNA JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 71 1048 2015 JRNL REFN ESSN 2053-230X JRNL PMID 26249698 JRNL DOI 10.1107/S2053230X15011887 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.44 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 16909 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 910 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1184 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.31 REMARK 3 BIN R VALUE (WORKING SET) : 0.3020 REMARK 3 BIN FREE R VALUE SET COUNT : 75 REMARK 3 BIN FREE R VALUE : 0.3180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4748 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 41 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.37000 REMARK 3 B22 (A**2) : -4.86000 REMARK 3 B33 (A**2) : -0.50000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.381 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.300 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 31.751 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4833 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4721 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6522 ; 1.430 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10822 ; 1.350 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 602 ; 5.461 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 217 ;31.627 ;23.548 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 874 ;16.298 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;16.290 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 737 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5434 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1114 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2420 ; 1.557 ; 2.855 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2419 ; 1.558 ; 2.855 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3018 ; 2.530 ; 4.277 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3019 ; 2.530 ; 4.278 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2413 ; 1.847 ; 3.077 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2414 ; 1.846 ; 3.077 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3505 ; 3.047 ; 4.539 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5456 ; 4.612 ;22.519 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5455 ; 4.611 ;22.520 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 6 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 173 324 B 173 324 9283 0.09 0.05 REMARK 3 2 A 177 322 C 177 322 8197 0.11 0.05 REMARK 3 3 A 171 320 D 171 320 8553 0.11 0.05 REMARK 3 4 B 177 322 C 177 322 8333 0.10 0.05 REMARK 3 5 B 173 320 D 173 320 8599 0.11 0.05 REMARK 3 6 C 177 320 D 177 320 7993 0.11 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 171 A 325 REMARK 3 ORIGIN FOR THE GROUP (A): 0.9577 1.4514 -0.2834 REMARK 3 T TENSOR REMARK 3 T11: 0.0539 T22: 0.0687 REMARK 3 T33: 0.2725 T12: -0.0314 REMARK 3 T13: -0.0507 T23: 0.0860 REMARK 3 L TENSOR REMARK 3 L11: 0.7755 L22: 1.7937 REMARK 3 L33: 2.9100 L12: -0.4333 REMARK 3 L13: -0.6118 L23: 0.4799 REMARK 3 S TENSOR REMARK 3 S11: 0.1376 S12: 0.0170 S13: -0.0311 REMARK 3 S21: 0.0682 S22: -0.1125 S23: -0.2670 REMARK 3 S31: -0.0023 S32: 0.0242 S33: -0.0251 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 173 B 325 REMARK 3 ORIGIN FOR THE GROUP (A): 0.8787 -30.2323 1.7470 REMARK 3 T TENSOR REMARK 3 T11: 0.0964 T22: 0.1421 REMARK 3 T33: 0.3065 T12: 0.0241 REMARK 3 T13: 0.0040 T23: 0.0893 REMARK 3 L TENSOR REMARK 3 L11: 0.3755 L22: 1.9474 REMARK 3 L33: 2.2149 L12: 0.0286 REMARK 3 L13: 0.3153 L23: 0.1992 REMARK 3 S TENSOR REMARK 3 S11: 0.1585 S12: 0.0121 S13: 0.0006 REMARK 3 S21: 0.0792 S22: -0.0809 S23: -0.1506 REMARK 3 S31: -0.0887 S32: -0.0749 S33: -0.0776 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 177 C 323 REMARK 3 ORIGIN FOR THE GROUP (A): -3.5609 -25.8926 -33.6307 REMARK 3 T TENSOR REMARK 3 T11: 0.3455 T22: 0.1494 REMARK 3 T33: 0.1455 T12: 0.1713 REMARK 3 T13: -0.0519 T23: 0.0476 REMARK 3 L TENSOR REMARK 3 L11: 2.5927 L22: 1.3617 REMARK 3 L33: 2.4936 L12: -0.3400 REMARK 3 L13: -0.3324 L23: -1.3013 REMARK 3 S TENSOR REMARK 3 S11: 0.2221 S12: 0.4335 S13: 0.2002 REMARK 3 S21: -0.2674 S22: -0.0838 S23: 0.2579 REMARK 3 S31: -0.2065 S32: -0.1840 S33: -0.1383 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 171 D 321 REMARK 3 ORIGIN FOR THE GROUP (A): -7.0779 -2.1058 35.3350 REMARK 3 T TENSOR REMARK 3 T11: 0.3471 T22: 0.0871 REMARK 3 T33: 0.0866 T12: -0.0632 REMARK 3 T13: -0.0769 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 2.4328 L22: 0.9224 REMARK 3 L33: 3.1849 L12: -0.5824 REMARK 3 L13: -0.1978 L23: -0.9475 REMARK 3 S TENSOR REMARK 3 S11: -0.0742 S12: -0.3386 S13: -0.1138 REMARK 3 S21: 0.3210 S22: 0.0275 S23: -0.0819 REMARK 3 S31: 0.2327 S32: 0.0162 S33: 0.0467 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4ZLC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209484. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17819 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 12.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.16900 REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG6000, 100 MM HEPES, 100 MM KCL, REMARK 280 PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.38000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.75000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.43400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 84.75000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.38000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.43400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN B 171 REMARK 465 ASN B 172 REMARK 465 GLN C 171 REMARK 465 ASN C 172 REMARK 465 PRO C 173 REMARK 465 GLN C 174 REMARK 465 GLN C 175 REMARK 465 LEU C 176 REMARK 465 PRO C 324 REMARK 465 GLU C 325 REMARK 465 GLN D 322 REMARK 465 SER D 323 REMARK 465 PRO D 324 REMARK 465 GLU D 325 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 174 CG CD OE1 NE2 REMARK 470 LYS A 311 CD CE NZ REMARK 470 GLN B 174 CB CG CD OE1 NE2 REMARK 470 ARG C 185 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 216 CD NE CZ NH1 NH2 REMARK 470 ARG C 230 CG CD NE CZ NH1 NH2 REMARK 470 VAL C 242 CG2 REMARK 470 LYS C 253 CG CD CE NZ REMARK 470 LYS C 256 CD CE NZ REMARK 470 ILE C 284 CB CG1 CG2 CD1 REMARK 470 GLU C 298 CD OE1 OE2 REMARK 470 LYS C 320 CG CD CE NZ REMARK 470 ASN D 172 CG OD1 ND2 REMARK 470 GLN D 174 CG CD OE1 NE2 REMARK 470 LYS D 202 CE NZ REMARK 470 GLN D 233 CG CD OE1 NE2 REMARK 470 ARG D 278 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 311 CD CE NZ REMARK 470 LYS D 320 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG C 187 OE1 GLU C 290 2.08 REMARK 500 OG SER B 215 OD2 ASP C 210 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 205 CA - CB - CG ANGL. DEV. = 21.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 259 -8.85 72.99 REMARK 500 ARG A 271 43.78 -92.05 REMARK 500 ARG B 271 44.62 -91.65 REMARK 500 ARG C 257 17.55 -143.40 REMARK 500 ARG C 271 45.79 -93.78 REMARK 500 ASP D 260 19.36 46.32 REMARK 500 ARG D 271 43.10 -92.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ZLD RELATED DB: PDB DBREF 4ZLC A 171 325 UNP Q9HBD1 RC3H2_HUMAN 171 325 DBREF 4ZLC B 171 325 UNP Q9HBD1 RC3H2_HUMAN 171 325 DBREF 4ZLC C 171 325 UNP Q9HBD1 RC3H2_HUMAN 171 325 DBREF 4ZLC D 171 325 UNP Q9HBD1 RC3H2_HUMAN 171 325 SEQRES 1 A 155 GLN ASN PRO GLN GLN LEU SER ALA ASN LEU TRP ALA ALA SEQRES 2 A 155 VAL ARG ALA ARG GLY CYS GLN PHE LEU GLY PRO ALA MET SEQRES 3 A 155 GLN GLU GLU ALA LEU LYS LEU VAL LEU LEU ALA LEU GLU SEQRES 4 A 155 ASP GLY SER ALA LEU SER ARG LYS VAL LEU VAL LEU PHE SEQRES 5 A 155 VAL VAL GLN ARG LEU GLU PRO ARG PHE PRO GLN ALA SER SEQRES 6 A 155 LYS THR SER ILE GLY HIS VAL VAL GLN LEU LEU TYR ARG SEQRES 7 A 155 ALA SER CYS PHE LYS VAL THR LYS ARG ASP GLU ASP SER SEQRES 8 A 155 SER LEU MET GLN LEU LYS GLU GLU PHE ARG SER TYR GLU SEQRES 9 A 155 ALA LEU ARG ARG GLU HIS ASP ALA GLN ILE VAL HIS ILE SEQRES 10 A 155 ALA MET GLU ALA GLY LEU ARG ILE SER PRO GLU GLN TRP SEQRES 11 A 155 SER SER LEU LEU TYR GLY ASP LEU ALA HIS LYS SER HIS SEQRES 12 A 155 MET GLN SER ILE ILE ASP LYS LEU GLN SER PRO GLU SEQRES 1 B 155 GLN ASN PRO GLN GLN LEU SER ALA ASN LEU TRP ALA ALA SEQRES 2 B 155 VAL ARG ALA ARG GLY CYS GLN PHE LEU GLY PRO ALA MET SEQRES 3 B 155 GLN GLU GLU ALA LEU LYS LEU VAL LEU LEU ALA LEU GLU SEQRES 4 B 155 ASP GLY SER ALA LEU SER ARG LYS VAL LEU VAL LEU PHE SEQRES 5 B 155 VAL VAL GLN ARG LEU GLU PRO ARG PHE PRO GLN ALA SER SEQRES 6 B 155 LYS THR SER ILE GLY HIS VAL VAL GLN LEU LEU TYR ARG SEQRES 7 B 155 ALA SER CYS PHE LYS VAL THR LYS ARG ASP GLU ASP SER SEQRES 8 B 155 SER LEU MET GLN LEU LYS GLU GLU PHE ARG SER TYR GLU SEQRES 9 B 155 ALA LEU ARG ARG GLU HIS ASP ALA GLN ILE VAL HIS ILE SEQRES 10 B 155 ALA MET GLU ALA GLY LEU ARG ILE SER PRO GLU GLN TRP SEQRES 11 B 155 SER SER LEU LEU TYR GLY ASP LEU ALA HIS LYS SER HIS SEQRES 12 B 155 MET GLN SER ILE ILE ASP LYS LEU GLN SER PRO GLU SEQRES 1 C 155 GLN ASN PRO GLN GLN LEU SER ALA ASN LEU TRP ALA ALA SEQRES 2 C 155 VAL ARG ALA ARG GLY CYS GLN PHE LEU GLY PRO ALA MET SEQRES 3 C 155 GLN GLU GLU ALA LEU LYS LEU VAL LEU LEU ALA LEU GLU SEQRES 4 C 155 ASP GLY SER ALA LEU SER ARG LYS VAL LEU VAL LEU PHE SEQRES 5 C 155 VAL VAL GLN ARG LEU GLU PRO ARG PHE PRO GLN ALA SER SEQRES 6 C 155 LYS THR SER ILE GLY HIS VAL VAL GLN LEU LEU TYR ARG SEQRES 7 C 155 ALA SER CYS PHE LYS VAL THR LYS ARG ASP GLU ASP SER SEQRES 8 C 155 SER LEU MET GLN LEU LYS GLU GLU PHE ARG SER TYR GLU SEQRES 9 C 155 ALA LEU ARG ARG GLU HIS ASP ALA GLN ILE VAL HIS ILE SEQRES 10 C 155 ALA MET GLU ALA GLY LEU ARG ILE SER PRO GLU GLN TRP SEQRES 11 C 155 SER SER LEU LEU TYR GLY ASP LEU ALA HIS LYS SER HIS SEQRES 12 C 155 MET GLN SER ILE ILE ASP LYS LEU GLN SER PRO GLU SEQRES 1 D 155 GLN ASN PRO GLN GLN LEU SER ALA ASN LEU TRP ALA ALA SEQRES 2 D 155 VAL ARG ALA ARG GLY CYS GLN PHE LEU GLY PRO ALA MET SEQRES 3 D 155 GLN GLU GLU ALA LEU LYS LEU VAL LEU LEU ALA LEU GLU SEQRES 4 D 155 ASP GLY SER ALA LEU SER ARG LYS VAL LEU VAL LEU PHE SEQRES 5 D 155 VAL VAL GLN ARG LEU GLU PRO ARG PHE PRO GLN ALA SER SEQRES 6 D 155 LYS THR SER ILE GLY HIS VAL VAL GLN LEU LEU TYR ARG SEQRES 7 D 155 ALA SER CYS PHE LYS VAL THR LYS ARG ASP GLU ASP SER SEQRES 8 D 155 SER LEU MET GLN LEU LYS GLU GLU PHE ARG SER TYR GLU SEQRES 9 D 155 ALA LEU ARG ARG GLU HIS ASP ALA GLN ILE VAL HIS ILE SEQRES 10 D 155 ALA MET GLU ALA GLY LEU ARG ILE SER PRO GLU GLN TRP SEQRES 11 D 155 SER SER LEU LEU TYR GLY ASP LEU ALA HIS LYS SER HIS SEQRES 12 D 155 MET GLN SER ILE ILE ASP LYS LEU GLN SER PRO GLU FORMUL 5 HOH *41(H2 O) HELIX 1 AA1 ASN A 172 ARG A 187 1 16 HELIX 2 AA2 GLY A 193 GLU A 209 1 17 HELIX 3 AA3 SER A 215 GLU A 228 1 14 HELIX 4 AA4 SER A 235 ALA A 249 1 15 HELIX 5 AA5 GLU A 268 ARG A 271 5 4 HELIX 6 AA6 SER A 272 ALA A 291 1 20 HELIX 7 AA7 SER A 296 GLY A 306 1 11 HELIX 8 AA8 HIS A 310 SER A 323 1 14 HELIX 9 AA9 GLN B 174 ARG B 187 1 14 HELIX 10 AB1 GLY B 193 GLU B 209 1 17 HELIX 11 AB2 SER B 215 GLU B 228 1 14 HELIX 12 AB3 SER B 235 ALA B 249 1 15 HELIX 13 AB4 GLU B 268 ARG B 271 5 4 HELIX 14 AB5 SER B 272 ALA B 291 1 20 HELIX 15 AB6 SER B 296 GLY B 306 1 11 HELIX 16 AB7 HIS B 310 SER B 323 1 14 HELIX 17 AB8 ALA C 178 ARG C 187 1 10 HELIX 18 AB9 GLY C 193 GLU C 209 1 17 HELIX 19 AC1 SER C 215 GLU C 228 1 14 HELIX 20 AC2 SER C 235 ALA C 249 1 15 HELIX 21 AC3 GLU C 268 ARG C 271 5 4 HELIX 22 AC4 SER C 272 ALA C 291 1 20 HELIX 23 AC5 SER C 296 GLY C 306 1 11 HELIX 24 AC6 HIS C 310 SER C 323 1 14 HELIX 25 AC7 ASN D 172 ARG D 187 1 16 HELIX 26 AC8 GLY D 193 GLU D 209 1 17 HELIX 27 AC9 SER D 215 GLU D 228 1 14 HELIX 28 AD1 SER D 235 ALA D 249 1 15 HELIX 29 AD2 GLU D 268 ARG D 271 5 4 HELIX 30 AD3 SER D 272 ALA D 291 1 20 HELIX 31 AD4 SER D 296 GLY D 306 1 11 HELIX 32 AD5 HIS D 310 LEU D 321 1 12 SHEET 1 AA1 2 PHE A 252 THR A 255 0 SHEET 2 AA1 2 LEU A 263 LEU A 266 -1 O GLN A 265 N LYS A 253 SHEET 1 AA2 2 PHE B 252 THR B 255 0 SHEET 2 AA2 2 LEU B 263 LEU B 266 -1 O GLN B 265 N LYS B 253 SHEET 1 AA3 2 PHE C 252 THR C 255 0 SHEET 2 AA3 2 LEU C 263 LEU C 266 -1 O GLN C 265 N LYS C 253 SHEET 1 AA4 2 PHE D 252 THR D 255 0 SHEET 2 AA4 2 LEU D 263 LEU D 266 -1 O GLN D 265 N LYS D 253 CISPEP 1 ASP C 258 GLU C 259 0 15.23 CRYST1 60.760 60.868 169.500 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016458 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016429 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005900 0.00000