data_4ZLD # _entry.id 4ZLD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4ZLD pdb_00004zld 10.2210/pdb4zld/pdb WWPDB D_1000209485 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-08-19 2 'Structure model' 1 1 2020-02-19 3 'Structure model' 1 2 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' diffrn_source 2 2 'Structure model' pdbx_struct_oper_list 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 2 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 3 3 'Structure model' '_database_2.pdbx_DOI' 4 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4ZLD _pdbx_database_status.recvd_initial_deposition_date 2015-05-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 4ZLC _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sakurai, S.' 1 'Ohto, U.' 2 'Shimizu, T.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acta Crystallogr.,Sect.F' _citation.journal_id_ASTM ACSFEN _citation.journal_id_CSD ? _citation.journal_id_ISSN 2053-230X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 71 _citation.language ? _citation.page_first 1048 _citation.page_last 1054 _citation.title 'Structure of human Roquin-2 and its complex with constitutive-decay element RNA' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1107/S2053230X15011887 _citation.pdbx_database_id_PubMed 26249698 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sakurai, S.' 1 ? primary 'Ohto, U.' 2 ? primary 'Shimizu, T.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Roquin-2 17593.250 1 ? ? 'UNP residues 171-325' ? 2 polymer syn ;RNA (5'-R(*UP*AP*AP*CP*UP*UP*CP*UP*GP*UP*GP*AP*AP*GP*UP*UP*G)-3') ; 5406.213 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 4 ? ? ? ? 4 water nat water 18.015 186 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Membrane-associated nucleic acid-binding protein,RING finger and CCCH-type zinc finger domain-containing protein 2,RING finger protein 164 ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;QNPQQLSANLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRAS CFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQWSSLLYGDLAHKSHMQSIIDKLQSPE ; ;QNPQQLSANLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRAS CFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQWSSLLYGDLAHKSHMQSIIDKLQSPE ; A ? 2 polyribonucleotide no no UAACUUCUGUGAAGUUG UAACUUCUGUGAAGUUG B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 GLYCEROL GOL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ASN n 1 3 PRO n 1 4 GLN n 1 5 GLN n 1 6 LEU n 1 7 SER n 1 8 ALA n 1 9 ASN n 1 10 LEU n 1 11 TRP n 1 12 ALA n 1 13 ALA n 1 14 VAL n 1 15 ARG n 1 16 ALA n 1 17 ARG n 1 18 GLY n 1 19 CYS n 1 20 GLN n 1 21 PHE n 1 22 LEU n 1 23 GLY n 1 24 PRO n 1 25 ALA n 1 26 MET n 1 27 GLN n 1 28 GLU n 1 29 GLU n 1 30 ALA n 1 31 LEU n 1 32 LYS n 1 33 LEU n 1 34 VAL n 1 35 LEU n 1 36 LEU n 1 37 ALA n 1 38 LEU n 1 39 GLU n 1 40 ASP n 1 41 GLY n 1 42 SER n 1 43 ALA n 1 44 LEU n 1 45 SER n 1 46 ARG n 1 47 LYS n 1 48 VAL n 1 49 LEU n 1 50 VAL n 1 51 LEU n 1 52 PHE n 1 53 VAL n 1 54 VAL n 1 55 GLN n 1 56 ARG n 1 57 LEU n 1 58 GLU n 1 59 PRO n 1 60 ARG n 1 61 PHE n 1 62 PRO n 1 63 GLN n 1 64 ALA n 1 65 SER n 1 66 LYS n 1 67 THR n 1 68 SER n 1 69 ILE n 1 70 GLY n 1 71 HIS n 1 72 VAL n 1 73 VAL n 1 74 GLN n 1 75 LEU n 1 76 LEU n 1 77 TYR n 1 78 ARG n 1 79 ALA n 1 80 SER n 1 81 CYS n 1 82 PHE n 1 83 LYS n 1 84 VAL n 1 85 THR n 1 86 LYS n 1 87 ARG n 1 88 ASP n 1 89 GLU n 1 90 ASP n 1 91 SER n 1 92 SER n 1 93 LEU n 1 94 MET n 1 95 GLN n 1 96 LEU n 1 97 LYS n 1 98 GLU n 1 99 GLU n 1 100 PHE n 1 101 ARG n 1 102 SER n 1 103 TYR n 1 104 GLU n 1 105 ALA n 1 106 LEU n 1 107 ARG n 1 108 ARG n 1 109 GLU n 1 110 HIS n 1 111 ASP n 1 112 ALA n 1 113 GLN n 1 114 ILE n 1 115 VAL n 1 116 HIS n 1 117 ILE n 1 118 ALA n 1 119 MET n 1 120 GLU n 1 121 ALA n 1 122 GLY n 1 123 LEU n 1 124 ARG n 1 125 ILE n 1 126 SER n 1 127 PRO n 1 128 GLU n 1 129 GLN n 1 130 TRP n 1 131 SER n 1 132 SER n 1 133 LEU n 1 134 LEU n 1 135 TYR n 1 136 GLY n 1 137 ASP n 1 138 LEU n 1 139 ALA n 1 140 HIS n 1 141 LYS n 1 142 SER n 1 143 HIS n 1 144 MET n 1 145 GLN n 1 146 SER n 1 147 ILE n 1 148 ILE n 1 149 ASP n 1 150 LYS n 1 151 LEU n 1 152 GLN n 1 153 SER n 1 154 PRO n 1 155 GLU n 2 1 U n 2 2 A n 2 3 A n 2 4 C n 2 5 U n 2 6 U n 2 7 C n 2 8 U n 2 9 G n 2 10 U n 2 11 G n 2 12 A n 2 13 A n 2 14 G n 2 15 U n 2 16 U n 2 17 G n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 155 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'RC3H2, MNAB, RNF164' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX6P-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 17 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 171 171 GLN GLN A . n A 1 2 ASN 2 172 172 ASN ASN A . n A 1 3 PRO 3 173 173 PRO PRO A . n A 1 4 GLN 4 174 174 GLN GLN A . n A 1 5 GLN 5 175 175 GLN GLN A . n A 1 6 LEU 6 176 176 LEU LEU A . n A 1 7 SER 7 177 177 SER SER A . n A 1 8 ALA 8 178 178 ALA ALA A . n A 1 9 ASN 9 179 179 ASN ASN A . n A 1 10 LEU 10 180 180 LEU LEU A . n A 1 11 TRP 11 181 181 TRP TRP A . n A 1 12 ALA 12 182 182 ALA ALA A . n A 1 13 ALA 13 183 183 ALA ALA A . n A 1 14 VAL 14 184 184 VAL VAL A . n A 1 15 ARG 15 185 185 ARG ARG A . n A 1 16 ALA 16 186 186 ALA ALA A . n A 1 17 ARG 17 187 187 ARG ARG A . n A 1 18 GLY 18 188 188 GLY GLY A . n A 1 19 CYS 19 189 189 CYS CYS A . n A 1 20 GLN 20 190 190 GLN GLN A . n A 1 21 PHE 21 191 191 PHE PHE A . n A 1 22 LEU 22 192 192 LEU LEU A . n A 1 23 GLY 23 193 193 GLY GLY A . n A 1 24 PRO 24 194 194 PRO PRO A . n A 1 25 ALA 25 195 195 ALA ALA A . n A 1 26 MET 26 196 196 MET MET A . n A 1 27 GLN 27 197 197 GLN GLN A . n A 1 28 GLU 28 198 198 GLU GLU A . n A 1 29 GLU 29 199 199 GLU GLU A . n A 1 30 ALA 30 200 200 ALA ALA A . n A 1 31 LEU 31 201 201 LEU LEU A . n A 1 32 LYS 32 202 202 LYS LYS A . n A 1 33 LEU 33 203 203 LEU LEU A . n A 1 34 VAL 34 204 204 VAL VAL A . n A 1 35 LEU 35 205 205 LEU LEU A . n A 1 36 LEU 36 206 206 LEU LEU A . n A 1 37 ALA 37 207 207 ALA ALA A . n A 1 38 LEU 38 208 208 LEU LEU A . n A 1 39 GLU 39 209 209 GLU GLU A . n A 1 40 ASP 40 210 210 ASP ASP A . n A 1 41 GLY 41 211 211 GLY GLY A . n A 1 42 SER 42 212 212 SER SER A . n A 1 43 ALA 43 213 213 ALA ALA A . n A 1 44 LEU 44 214 214 LEU LEU A . n A 1 45 SER 45 215 215 SER SER A . n A 1 46 ARG 46 216 216 ARG ARG A . n A 1 47 LYS 47 217 217 LYS LYS A . n A 1 48 VAL 48 218 218 VAL VAL A . n A 1 49 LEU 49 219 219 LEU LEU A . n A 1 50 VAL 50 220 220 VAL VAL A . n A 1 51 LEU 51 221 221 LEU LEU A . n A 1 52 PHE 52 222 222 PHE PHE A . n A 1 53 VAL 53 223 223 VAL VAL A . n A 1 54 VAL 54 224 224 VAL VAL A . n A 1 55 GLN 55 225 225 GLN GLN A . n A 1 56 ARG 56 226 226 ARG ARG A . n A 1 57 LEU 57 227 227 LEU LEU A . n A 1 58 GLU 58 228 228 GLU GLU A . n A 1 59 PRO 59 229 229 PRO PRO A . n A 1 60 ARG 60 230 230 ARG ARG A . n A 1 61 PHE 61 231 231 PHE PHE A . n A 1 62 PRO 62 232 232 PRO PRO A . n A 1 63 GLN 63 233 233 GLN GLN A . n A 1 64 ALA 64 234 234 ALA ALA A . n A 1 65 SER 65 235 235 SER SER A . n A 1 66 LYS 66 236 236 LYS LYS A . n A 1 67 THR 67 237 237 THR THR A . n A 1 68 SER 68 238 238 SER SER A . n A 1 69 ILE 69 239 239 ILE ILE A . n A 1 70 GLY 70 240 240 GLY GLY A . n A 1 71 HIS 71 241 241 HIS HIS A . n A 1 72 VAL 72 242 242 VAL VAL A . n A 1 73 VAL 73 243 243 VAL VAL A . n A 1 74 GLN 74 244 244 GLN GLN A . n A 1 75 LEU 75 245 245 LEU LEU A . n A 1 76 LEU 76 246 246 LEU LEU A . n A 1 77 TYR 77 247 247 TYR TYR A . n A 1 78 ARG 78 248 248 ARG ARG A . n A 1 79 ALA 79 249 249 ALA ALA A . n A 1 80 SER 80 250 250 SER SER A . n A 1 81 CYS 81 251 251 CYS CYS A . n A 1 82 PHE 82 252 252 PHE PHE A . n A 1 83 LYS 83 253 253 LYS LYS A . n A 1 84 VAL 84 254 254 VAL VAL A . n A 1 85 THR 85 255 255 THR THR A . n A 1 86 LYS 86 256 256 LYS LYS A . n A 1 87 ARG 87 257 257 ARG ARG A . n A 1 88 ASP 88 258 258 ASP ASP A . n A 1 89 GLU 89 259 259 GLU GLU A . n A 1 90 ASP 90 260 260 ASP ASP A . n A 1 91 SER 91 261 261 SER SER A . n A 1 92 SER 92 262 262 SER SER A . n A 1 93 LEU 93 263 263 LEU LEU A . n A 1 94 MET 94 264 264 MET MET A . n A 1 95 GLN 95 265 265 GLN GLN A . n A 1 96 LEU 96 266 266 LEU LEU A . n A 1 97 LYS 97 267 267 LYS LYS A . n A 1 98 GLU 98 268 268 GLU GLU A . n A 1 99 GLU 99 269 269 GLU GLU A . n A 1 100 PHE 100 270 270 PHE PHE A . n A 1 101 ARG 101 271 271 ARG ARG A . n A 1 102 SER 102 272 272 SER SER A . n A 1 103 TYR 103 273 273 TYR TYR A . n A 1 104 GLU 104 274 274 GLU GLU A . n A 1 105 ALA 105 275 275 ALA ALA A . n A 1 106 LEU 106 276 276 LEU LEU A . n A 1 107 ARG 107 277 277 ARG ARG A . n A 1 108 ARG 108 278 278 ARG ARG A . n A 1 109 GLU 109 279 279 GLU GLU A . n A 1 110 HIS 110 280 280 HIS HIS A . n A 1 111 ASP 111 281 281 ASP ASP A . n A 1 112 ALA 112 282 282 ALA ALA A . n A 1 113 GLN 113 283 283 GLN GLN A . n A 1 114 ILE 114 284 284 ILE ILE A . n A 1 115 VAL 115 285 285 VAL VAL A . n A 1 116 HIS 116 286 286 HIS HIS A . n A 1 117 ILE 117 287 287 ILE ILE A . n A 1 118 ALA 118 288 288 ALA ALA A . n A 1 119 MET 119 289 289 MET MET A . n A 1 120 GLU 120 290 290 GLU GLU A . n A 1 121 ALA 121 291 291 ALA ALA A . n A 1 122 GLY 122 292 292 GLY GLY A . n A 1 123 LEU 123 293 293 LEU LEU A . n A 1 124 ARG 124 294 294 ARG ARG A . n A 1 125 ILE 125 295 295 ILE ILE A . n A 1 126 SER 126 296 296 SER SER A . n A 1 127 PRO 127 297 297 PRO PRO A . n A 1 128 GLU 128 298 298 GLU GLU A . n A 1 129 GLN 129 299 299 GLN GLN A . n A 1 130 TRP 130 300 300 TRP TRP A . n A 1 131 SER 131 301 301 SER SER A . n A 1 132 SER 132 302 302 SER SER A . n A 1 133 LEU 133 303 303 LEU LEU A . n A 1 134 LEU 134 304 304 LEU LEU A . n A 1 135 TYR 135 305 305 TYR TYR A . n A 1 136 GLY 136 306 306 GLY GLY A . n A 1 137 ASP 137 307 307 ASP ASP A . n A 1 138 LEU 138 308 308 LEU LEU A . n A 1 139 ALA 139 309 309 ALA ALA A . n A 1 140 HIS 140 310 310 HIS HIS A . n A 1 141 LYS 141 311 311 LYS LYS A . n A 1 142 SER 142 312 312 SER SER A . n A 1 143 HIS 143 313 313 HIS HIS A . n A 1 144 MET 144 314 314 MET MET A . n A 1 145 GLN 145 315 315 GLN GLN A . n A 1 146 SER 146 316 316 SER SER A . n A 1 147 ILE 147 317 317 ILE ILE A . n A 1 148 ILE 148 318 318 ILE ILE A . n A 1 149 ASP 149 319 319 ASP ASP A . n A 1 150 LYS 150 320 320 LYS LYS A . n A 1 151 LEU 151 321 321 LEU LEU A . n A 1 152 GLN 152 322 ? ? ? A . n A 1 153 SER 153 323 ? ? ? A . n A 1 154 PRO 154 324 ? ? ? A . n A 1 155 GLU 155 325 ? ? ? A . n B 2 1 U 1 1 1 U U B . n B 2 2 A 2 2 2 A A B . n B 2 3 A 3 3 3 A A B . n B 2 4 C 4 4 4 C C B . n B 2 5 U 5 5 5 U U B . n B 2 6 U 6 6 6 U U B . n B 2 7 C 7 7 7 C C B . n B 2 8 U 8 8 8 U U B . n B 2 9 G 9 9 9 G G B . n B 2 10 U 10 10 10 U U B . n B 2 11 G 11 11 11 G G B . n B 2 12 A 12 12 12 A A B . n B 2 13 A 13 13 13 A A B . n B 2 14 G 14 14 14 G G B . n B 2 15 U 15 15 15 U U B . n B 2 16 U 16 16 16 U U B . n B 2 17 G 17 17 17 G G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL 1 501 1 GOL GOL A . D 3 GOL 1 502 2 GOL GOL A . E 3 GOL 1 503 3 GOL GOL A . F 3 GOL 1 504 4 GOL GOL A . G 4 HOH 1 601 144 HOH HOH A . G 4 HOH 2 602 46 HOH HOH A . G 4 HOH 3 603 93 HOH HOH A . G 4 HOH 4 604 115 HOH HOH A . G 4 HOH 5 605 172 HOH HOH A . G 4 HOH 6 606 159 HOH HOH A . G 4 HOH 7 607 153 HOH HOH A . G 4 HOH 8 608 201 HOH HOH A . G 4 HOH 9 609 183 HOH HOH A . G 4 HOH 10 610 133 HOH HOH A . G 4 HOH 11 611 171 HOH HOH A . G 4 HOH 12 612 140 HOH HOH A . G 4 HOH 13 613 216 HOH HOH A . G 4 HOH 14 614 182 HOH HOH A . G 4 HOH 15 615 101 HOH HOH A . G 4 HOH 16 616 2 HOH HOH A . G 4 HOH 17 617 196 HOH HOH A . G 4 HOH 18 618 19 HOH HOH A . G 4 HOH 19 619 34 HOH HOH A . G 4 HOH 20 620 13 HOH HOH A . G 4 HOH 21 621 124 HOH HOH A . G 4 HOH 22 622 206 HOH HOH A . G 4 HOH 23 623 42 HOH HOH A . G 4 HOH 24 624 85 HOH HOH A . G 4 HOH 25 625 86 HOH HOH A . G 4 HOH 26 626 16 HOH HOH A . G 4 HOH 27 627 207 HOH HOH A . G 4 HOH 28 628 51 HOH HOH A . G 4 HOH 29 629 17 HOH HOH A . G 4 HOH 30 630 210 HOH HOH A . G 4 HOH 31 631 131 HOH HOH A . G 4 HOH 32 632 3 HOH HOH A . G 4 HOH 33 633 20 HOH HOH A . G 4 HOH 34 634 197 HOH HOH A . G 4 HOH 35 635 1 HOH HOH A . G 4 HOH 36 636 104 HOH HOH A . G 4 HOH 37 637 167 HOH HOH A . G 4 HOH 38 638 75 HOH HOH A . G 4 HOH 39 639 157 HOH HOH A . G 4 HOH 40 640 64 HOH HOH A . G 4 HOH 41 641 84 HOH HOH A . G 4 HOH 42 642 26 HOH HOH A . G 4 HOH 43 643 44 HOH HOH A . G 4 HOH 44 644 50 HOH HOH A . G 4 HOH 45 645 127 HOH HOH A . G 4 HOH 46 646 89 HOH HOH A . G 4 HOH 47 647 83 HOH HOH A . G 4 HOH 48 648 123 HOH HOH A . G 4 HOH 49 649 199 HOH HOH A . G 4 HOH 50 650 193 HOH HOH A . G 4 HOH 51 651 94 HOH HOH A . G 4 HOH 52 652 15 HOH HOH A . G 4 HOH 53 653 108 HOH HOH A . G 4 HOH 54 654 80 HOH HOH A . G 4 HOH 55 655 87 HOH HOH A . G 4 HOH 56 656 29 HOH HOH A . G 4 HOH 57 657 147 HOH HOH A . G 4 HOH 58 658 59 HOH HOH A . G 4 HOH 59 659 76 HOH HOH A . G 4 HOH 60 660 9 HOH HOH A . G 4 HOH 61 661 198 HOH HOH A . G 4 HOH 62 662 168 HOH HOH A . G 4 HOH 63 663 142 HOH HOH A . G 4 HOH 64 664 174 HOH HOH A . G 4 HOH 65 665 37 HOH HOH A . G 4 HOH 66 666 185 HOH HOH A . G 4 HOH 67 667 88 HOH HOH A . G 4 HOH 68 668 102 HOH HOH A . G 4 HOH 69 669 138 HOH HOH A . G 4 HOH 70 670 158 HOH HOH A . G 4 HOH 71 671 113 HOH HOH A . G 4 HOH 72 672 71 HOH HOH A . G 4 HOH 73 673 114 HOH HOH A . G 4 HOH 74 674 120 HOH HOH A . G 4 HOH 75 675 74 HOH HOH A . G 4 HOH 76 676 73 HOH HOH A . G 4 HOH 77 677 38 HOH HOH A . G 4 HOH 78 678 109 HOH HOH A . G 4 HOH 79 679 28 HOH HOH A . G 4 HOH 80 680 202 HOH HOH A . G 4 HOH 81 681 48 HOH HOH A . G 4 HOH 82 682 209 HOH HOH A . G 4 HOH 83 683 118 HOH HOH A . G 4 HOH 84 684 152 HOH HOH A . G 4 HOH 85 685 139 HOH HOH A . G 4 HOH 86 686 212 HOH HOH A . G 4 HOH 87 687 81 HOH HOH A . G 4 HOH 88 688 205 HOH HOH A . G 4 HOH 89 689 92 HOH HOH A . G 4 HOH 90 690 190 HOH HOH A . G 4 HOH 91 691 187 HOH HOH A . G 4 HOH 92 692 178 HOH HOH A . G 4 HOH 93 693 180 HOH HOH A . G 4 HOH 94 694 214 HOH HOH A . G 4 HOH 95 695 189 HOH HOH A . G 4 HOH 96 696 125 HOH HOH A . G 4 HOH 97 697 141 HOH HOH A . G 4 HOH 98 698 211 HOH HOH A . G 4 HOH 99 699 116 HOH HOH A . G 4 HOH 100 700 58 HOH HOH A . G 4 HOH 101 701 117 HOH HOH A . G 4 HOH 102 702 195 HOH HOH A . G 4 HOH 103 703 213 HOH HOH A . G 4 HOH 104 704 166 HOH HOH A . G 4 HOH 105 705 39 HOH HOH A . G 4 HOH 106 706 40 HOH HOH A . G 4 HOH 107 707 63 HOH HOH A . G 4 HOH 108 708 173 HOH HOH A . G 4 HOH 109 709 56 HOH HOH A . G 4 HOH 110 710 160 HOH HOH A . G 4 HOH 111 711 95 HOH HOH A . H 4 HOH 1 101 60 HOH HOH B . H 4 HOH 2 102 65 HOH HOH B . H 4 HOH 3 103 156 HOH HOH B . H 4 HOH 4 104 146 HOH HOH B . H 4 HOH 5 105 203 HOH HOH B . H 4 HOH 6 106 134 HOH HOH B . H 4 HOH 7 107 200 HOH HOH B . H 4 HOH 8 108 122 HOH HOH B . H 4 HOH 9 109 24 HOH HOH B . H 4 HOH 10 110 143 HOH HOH B . H 4 HOH 11 111 10 HOH HOH B . H 4 HOH 12 112 30 HOH HOH B . H 4 HOH 13 113 36 HOH HOH B . H 4 HOH 14 114 47 HOH HOH B . H 4 HOH 15 115 69 HOH HOH B . H 4 HOH 16 116 4 HOH HOH B . H 4 HOH 17 117 90 HOH HOH B . H 4 HOH 18 118 169 HOH HOH B . H 4 HOH 19 119 5 HOH HOH B . H 4 HOH 20 120 77 HOH HOH B . H 4 HOH 21 121 62 HOH HOH B . H 4 HOH 22 122 128 HOH HOH B . H 4 HOH 23 123 35 HOH HOH B . H 4 HOH 24 124 194 HOH HOH B . H 4 HOH 25 125 14 HOH HOH B . H 4 HOH 26 126 6 HOH HOH B . H 4 HOH 27 127 67 HOH HOH B . H 4 HOH 28 128 177 HOH HOH B . H 4 HOH 29 129 49 HOH HOH B . H 4 HOH 30 130 31 HOH HOH B . H 4 HOH 31 131 32 HOH HOH B . H 4 HOH 32 132 112 HOH HOH B . H 4 HOH 33 133 164 HOH HOH B . H 4 HOH 34 134 33 HOH HOH B . H 4 HOH 35 135 53 HOH HOH B . H 4 HOH 36 136 57 HOH HOH B . H 4 HOH 37 137 215 HOH HOH B . H 4 HOH 38 138 8 HOH HOH B . H 4 HOH 39 139 91 HOH HOH B . H 4 HOH 40 140 61 HOH HOH B . H 4 HOH 41 141 97 HOH HOH B . H 4 HOH 42 142 45 HOH HOH B . H 4 HOH 43 143 78 HOH HOH B . H 4 HOH 44 144 186 HOH HOH B . H 4 HOH 45 145 52 HOH HOH B . H 4 HOH 46 146 41 HOH HOH B . H 4 HOH 47 147 121 HOH HOH B . H 4 HOH 48 148 7 HOH HOH B . H 4 HOH 49 149 21 HOH HOH B . H 4 HOH 50 150 165 HOH HOH B . H 4 HOH 51 151 27 HOH HOH B . H 4 HOH 52 152 25 HOH HOH B . H 4 HOH 53 153 130 HOH HOH B . H 4 HOH 54 154 175 HOH HOH B . H 4 HOH 55 155 145 HOH HOH B . H 4 HOH 56 156 163 HOH HOH B . H 4 HOH 57 157 136 HOH HOH B . H 4 HOH 58 158 12 HOH HOH B . H 4 HOH 59 159 54 HOH HOH B . H 4 HOH 60 160 148 HOH HOH B . H 4 HOH 61 161 18 HOH HOH B . H 4 HOH 62 162 191 HOH HOH B . H 4 HOH 63 163 68 HOH HOH B . H 4 HOH 64 164 11 HOH HOH B . H 4 HOH 65 165 176 HOH HOH B . H 4 HOH 66 166 204 HOH HOH B . H 4 HOH 67 167 151 HOH HOH B . H 4 HOH 68 168 181 HOH HOH B . H 4 HOH 69 169 184 HOH HOH B . H 4 HOH 70 170 170 HOH HOH B . H 4 HOH 71 171 192 HOH HOH B . H 4 HOH 72 172 179 HOH HOH B . H 4 HOH 73 173 149 HOH HOH B . H 4 HOH 74 174 217 HOH HOH B . H 4 HOH 75 175 79 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0049 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _cell.entry_id 4ZLD _cell.length_a 59.236 _cell.length_b 89.955 _cell.length_c 84.632 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZLD _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4ZLD _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.45 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 49.82 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% PEG8000, 100 mM Tris, 200 mM LiCl' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-04-16 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4ZLD _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.6 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 29045 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 95.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.049 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 24.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4ZLD _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 27572 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 49.47 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 95.86 _refine.ls_R_factor_obs 0.15623 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.15518 _refine.ls_R_factor_R_free 0.17635 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1473 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.972 _refine.correlation_coeff_Fo_to_Fc_free 0.964 _refine.B_iso_mean 22.170 _refine.aniso_B[1][1] 0.06 _refine.aniso_B[2][2] -0.08 _refine.aniso_B[3][3] 0.02 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.076 _refine.pdbx_overall_ESU_R_Free 0.075 _refine.overall_SU_ML 0.045 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.273 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1203 _refine_hist.pdbx_number_atoms_nucleic_acid 357 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.number_atoms_solvent 186 _refine_hist.number_atoms_total 1770 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 49.47 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.017 ? 1686 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1442 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.258 1.799 ? 2353 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.913 3.000 ? 3339 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.941 5.000 ? 159 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 29.689 23.729 ? 59 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.556 15.000 ? 239 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.159 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.066 0.200 ? 264 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 1637 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 378 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.125 2.040 ? 627 'X-RAY DIFFRACTION' ? r_mcbond_other 1.127 2.038 ? 625 'X-RAY DIFFRACTION' ? r_mcangle_it 1.770 3.059 ? 789 'X-RAY DIFFRACTION' ? r_mcangle_other 1.769 3.061 ? 790 'X-RAY DIFFRACTION' ? r_scbond_it 1.680 2.204 ? 1059 'X-RAY DIFFRACTION' ? r_scbond_other 1.679 2.204 ? 1059 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 2.636 3.226 ? 1565 'X-RAY DIFFRACTION' ? r_long_range_B_refined 4.649 18.185 ? 2154 'X-RAY DIFFRACTION' ? r_long_range_B_other 4.648 18.184 ? 2154 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.598 _refine_ls_shell.d_res_low 1.640 _refine_ls_shell.number_reflns_R_work 1871 _refine_ls_shell.R_factor_R_work 0.210 _refine_ls_shell.percent_reflns_obs 89.19 _refine_ls_shell.R_factor_R_free 0.193 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 101 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 4ZLD _struct.title 'Crystal structure of human Roquin-2 ROQ domain in complex with Roquin CDE RNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4ZLD _struct_keywords.text 'RNA BINDING PROTEIN, RNA BINDING PROTEIN-RNA complex' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP RC3H2_HUMAN Q9HBD1 ? 1 ;QNPQQLSANLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRAS CFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQWSSLLYGDLAHKSHMQSIIDKLQSPE ; 171 2 PDB 4ZLD 4ZLD ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4ZLD A 1 ? 155 ? Q9HBD1 171 ? 325 ? 171 325 2 2 4ZLD B 1 ? 17 ? 4ZLD 1 ? 17 ? 1 17 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2810 ? 1 MORE -19 ? 1 'SSA (A^2)' 9670 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 2 ? ARG A 17 ? ASN A 172 ARG A 187 1 ? 16 HELX_P HELX_P2 AA2 GLY A 23 ? GLU A 39 ? GLY A 193 GLU A 209 1 ? 17 HELX_P HELX_P3 AA3 ARG A 46 ? GLU A 58 ? ARG A 216 GLU A 228 1 ? 13 HELX_P HELX_P4 AA4 SER A 65 ? ALA A 79 ? SER A 235 ALA A 249 1 ? 15 HELX_P HELX_P5 AA5 GLU A 98 ? ARG A 101 ? GLU A 268 ARG A 271 5 ? 4 HELX_P HELX_P6 AA6 SER A 102 ? ALA A 121 ? SER A 272 ALA A 291 1 ? 20 HELX_P HELX_P7 AA7 SER A 126 ? GLY A 136 ? SER A 296 GLY A 306 1 ? 11 HELX_P HELX_P8 AA8 HIS A 140 ? LEU A 151 ? HIS A 310 LEU A 321 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B A 2 N1 ? ? ? 1_555 B U 16 N3 ? ? B A 2 B U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B A 2 N6 ? ? ? 1_555 B U 16 O4 ? ? B A 2 B U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B A 3 N1 ? ? ? 1_555 B U 15 N3 ? ? B A 3 B U 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B A 3 N6 ? ? ? 1_555 B U 15 O4 ? ? B A 3 B U 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 14 N1 ? ? B C 4 B G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 14 O6 ? ? B C 4 B G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 14 N2 ? ? B C 4 B G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B U 5 N3 ? ? ? 1_555 B A 13 N1 ? ? B U 5 B A 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B U 5 O4 ? ? ? 1_555 B A 13 N6 ? ? B U 5 B A 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B U 6 N3 ? ? ? 1_555 B A 12 N1 ? ? B U 6 B A 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B U 6 O4 ? ? ? 1_555 B A 12 N6 ? ? B U 6 B A 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B C 7 N3 ? ? ? 1_555 B G 11 N1 ? ? B C 7 B G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B C 7 N4 ? ? ? 1_555 B G 11 O6 ? ? B C 7 B G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B C 7 O2 ? ? ? 1_555 B G 11 N2 ? ? B C 7 B G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 44 ? SER A 45 ? LEU A 214 SER A 215 AA1 2 ASP A 90 ? LEU A 96 ? ASP A 260 LEU A 266 AA1 3 PHE A 82 ? ARG A 87 ? PHE A 252 ARG A 257 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 44 ? N LEU A 214 O MET A 94 ? O MET A 264 AA1 2 3 O LEU A 93 ? O LEU A 263 N THR A 85 ? N THR A 255 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 501 ? 8 'binding site for residue GOL A 501' AC2 Software A GOL 502 ? 5 'binding site for residue GOL A 502' AC3 Software A GOL 503 ? 8 'binding site for residue GOL A 503' AC4 Software A GOL 504 ? 4 'binding site for residue GOL A 504' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 ARG A 15 ? ARG A 185 . ? 1_555 ? 2 AC1 8 GLN A 20 ? GLN A 190 . ? 1_555 ? 3 AC1 8 PHE A 21 ? PHE A 191 . ? 1_555 ? 4 AC1 8 LEU A 22 ? LEU A 192 . ? 1_555 ? 5 AC1 8 U B 1 ? U B 1 . ? 3_454 ? 6 AC1 8 U B 1 ? U B 1 . ? 1_555 ? 7 AC1 8 HOH H . ? HOH B 105 . ? 1_555 ? 8 AC1 8 HOH H . ? HOH B 107 . ? 3_454 ? 9 AC2 5 GLN A 145 ? GLN A 315 . ? 1_555 ? 10 AC2 5 ASP A 149 ? ASP A 319 . ? 1_555 ? 11 AC2 5 HOH G . ? HOH A 618 . ? 1_555 ? 12 AC2 5 U B 5 ? U B 5 . ? 7_454 ? 13 AC2 5 U B 6 ? U B 6 . ? 7_454 ? 14 AC3 8 TYR A 77 ? TYR A 247 . ? 1_555 ? 15 AC3 8 SER A 80 ? SER A 250 . ? 1_555 ? 16 AC3 8 CYS A 81 ? CYS A 251 . ? 1_555 ? 17 AC3 8 PHE A 82 ? PHE A 252 . ? 1_555 ? 18 AC3 8 VAL A 84 ? VAL A 254 . ? 1_555 ? 19 AC3 8 HOH G . ? HOH A 627 . ? 1_555 ? 20 AC3 8 HOH G . ? HOH A 659 . ? 1_555 ? 21 AC3 8 U B 10 ? U B 10 . ? 1_555 ? 22 AC4 4 GLU A 109 ? GLU A 279 . ? 1_555 ? 23 AC4 4 GLN A 113 ? GLN A 283 . ? 1_555 ? 24 AC4 4 LEU A 151 ? LEU A 321 . ? 1_555 ? 25 AC4 4 HOH G . ? HOH A 608 . ? 1_555 ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ARG _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 271 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -91.73 _pdbx_validate_torsion.psi 30.61 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 680 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id G _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 322 ? A GLN 152 2 1 Y 1 A SER 323 ? A SER 153 3 1 Y 1 A PRO 324 ? A PRO 154 4 1 Y 1 A GLU 325 ? A GLU 155 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 GOL C1 C N N 247 GOL O1 O N N 248 GOL C2 C N N 249 GOL O2 O N N 250 GOL C3 C N N 251 GOL O3 O N N 252 GOL H11 H N N 253 GOL H12 H N N 254 GOL HO1 H N N 255 GOL H2 H N N 256 GOL HO2 H N N 257 GOL H31 H N N 258 GOL H32 H N N 259 GOL HO3 H N N 260 HIS N N N N 261 HIS CA C N S 262 HIS C C N N 263 HIS O O N N 264 HIS CB C N N 265 HIS CG C Y N 266 HIS ND1 N Y N 267 HIS CD2 C Y N 268 HIS CE1 C Y N 269 HIS NE2 N Y N 270 HIS OXT O N N 271 HIS H H N N 272 HIS H2 H N N 273 HIS HA H N N 274 HIS HB2 H N N 275 HIS HB3 H N N 276 HIS HD1 H N N 277 HIS HD2 H N N 278 HIS HE1 H N N 279 HIS HE2 H N N 280 HIS HXT H N N 281 HOH O O N N 282 HOH H1 H N N 283 HOH H2 H N N 284 ILE N N N N 285 ILE CA C N S 286 ILE C C N N 287 ILE O O N N 288 ILE CB C N S 289 ILE CG1 C N N 290 ILE CG2 C N N 291 ILE CD1 C N N 292 ILE OXT O N N 293 ILE H H N N 294 ILE H2 H N N 295 ILE HA H N N 296 ILE HB H N N 297 ILE HG12 H N N 298 ILE HG13 H N N 299 ILE HG21 H N N 300 ILE HG22 H N N 301 ILE HG23 H N N 302 ILE HD11 H N N 303 ILE HD12 H N N 304 ILE HD13 H N N 305 ILE HXT H N N 306 LEU N N N N 307 LEU CA C N S 308 LEU C C N N 309 LEU O O N N 310 LEU CB C N N 311 LEU CG C N N 312 LEU CD1 C N N 313 LEU CD2 C N N 314 LEU OXT O N N 315 LEU H H N N 316 LEU H2 H N N 317 LEU HA H N N 318 LEU HB2 H N N 319 LEU HB3 H N N 320 LEU HG H N N 321 LEU HD11 H N N 322 LEU HD12 H N N 323 LEU HD13 H N N 324 LEU HD21 H N N 325 LEU HD22 H N N 326 LEU HD23 H N N 327 LEU HXT H N N 328 LYS N N N N 329 LYS CA C N S 330 LYS C C N N 331 LYS O O N N 332 LYS CB C N N 333 LYS CG C N N 334 LYS CD C N N 335 LYS CE C N N 336 LYS NZ N N N 337 LYS OXT O N N 338 LYS H H N N 339 LYS H2 H N N 340 LYS HA H N N 341 LYS HB2 H N N 342 LYS HB3 H N N 343 LYS HG2 H N N 344 LYS HG3 H N N 345 LYS HD2 H N N 346 LYS HD3 H N N 347 LYS HE2 H N N 348 LYS HE3 H N N 349 LYS HZ1 H N N 350 LYS HZ2 H N N 351 LYS HZ3 H N N 352 LYS HXT H N N 353 MET N N N N 354 MET CA C N S 355 MET C C N N 356 MET O O N N 357 MET CB C N N 358 MET CG C N N 359 MET SD S N N 360 MET CE C N N 361 MET OXT O N N 362 MET H H N N 363 MET H2 H N N 364 MET HA H N N 365 MET HB2 H N N 366 MET HB3 H N N 367 MET HG2 H N N 368 MET HG3 H N N 369 MET HE1 H N N 370 MET HE2 H N N 371 MET HE3 H N N 372 MET HXT H N N 373 PHE N N N N 374 PHE CA C N S 375 PHE C C N N 376 PHE O O N N 377 PHE CB C N N 378 PHE CG C Y N 379 PHE CD1 C Y N 380 PHE CD2 C Y N 381 PHE CE1 C Y N 382 PHE CE2 C Y N 383 PHE CZ C Y N 384 PHE OXT O N N 385 PHE H H N N 386 PHE H2 H N N 387 PHE HA H N N 388 PHE HB2 H N N 389 PHE HB3 H N N 390 PHE HD1 H N N 391 PHE HD2 H N N 392 PHE HE1 H N N 393 PHE HE2 H N N 394 PHE HZ H N N 395 PHE HXT H N N 396 PRO N N N N 397 PRO CA C N S 398 PRO C C N N 399 PRO O O N N 400 PRO CB C N N 401 PRO CG C N N 402 PRO CD C N N 403 PRO OXT O N N 404 PRO H H N N 405 PRO HA H N N 406 PRO HB2 H N N 407 PRO HB3 H N N 408 PRO HG2 H N N 409 PRO HG3 H N N 410 PRO HD2 H N N 411 PRO HD3 H N N 412 PRO HXT H N N 413 SER N N N N 414 SER CA C N S 415 SER C C N N 416 SER O O N N 417 SER CB C N N 418 SER OG O N N 419 SER OXT O N N 420 SER H H N N 421 SER H2 H N N 422 SER HA H N N 423 SER HB2 H N N 424 SER HB3 H N N 425 SER HG H N N 426 SER HXT H N N 427 THR N N N N 428 THR CA C N S 429 THR C C N N 430 THR O O N N 431 THR CB C N R 432 THR OG1 O N N 433 THR CG2 C N N 434 THR OXT O N N 435 THR H H N N 436 THR H2 H N N 437 THR HA H N N 438 THR HB H N N 439 THR HG1 H N N 440 THR HG21 H N N 441 THR HG22 H N N 442 THR HG23 H N N 443 THR HXT H N N 444 TRP N N N N 445 TRP CA C N S 446 TRP C C N N 447 TRP O O N N 448 TRP CB C N N 449 TRP CG C Y N 450 TRP CD1 C Y N 451 TRP CD2 C Y N 452 TRP NE1 N Y N 453 TRP CE2 C Y N 454 TRP CE3 C Y N 455 TRP CZ2 C Y N 456 TRP CZ3 C Y N 457 TRP CH2 C Y N 458 TRP OXT O N N 459 TRP H H N N 460 TRP H2 H N N 461 TRP HA H N N 462 TRP HB2 H N N 463 TRP HB3 H N N 464 TRP HD1 H N N 465 TRP HE1 H N N 466 TRP HE3 H N N 467 TRP HZ2 H N N 468 TRP HZ3 H N N 469 TRP HH2 H N N 470 TRP HXT H N N 471 TYR N N N N 472 TYR CA C N S 473 TYR C C N N 474 TYR O O N N 475 TYR CB C N N 476 TYR CG C Y N 477 TYR CD1 C Y N 478 TYR CD2 C Y N 479 TYR CE1 C Y N 480 TYR CE2 C Y N 481 TYR CZ C Y N 482 TYR OH O N N 483 TYR OXT O N N 484 TYR H H N N 485 TYR H2 H N N 486 TYR HA H N N 487 TYR HB2 H N N 488 TYR HB3 H N N 489 TYR HD1 H N N 490 TYR HD2 H N N 491 TYR HE1 H N N 492 TYR HE2 H N N 493 TYR HH H N N 494 TYR HXT H N N 495 U OP3 O N N 496 U P P N N 497 U OP1 O N N 498 U OP2 O N N 499 U "O5'" O N N 500 U "C5'" C N N 501 U "C4'" C N R 502 U "O4'" O N N 503 U "C3'" C N S 504 U "O3'" O N N 505 U "C2'" C N R 506 U "O2'" O N N 507 U "C1'" C N R 508 U N1 N N N 509 U C2 C N N 510 U O2 O N N 511 U N3 N N N 512 U C4 C N N 513 U O4 O N N 514 U C5 C N N 515 U C6 C N N 516 U HOP3 H N N 517 U HOP2 H N N 518 U "H5'" H N N 519 U "H5''" H N N 520 U "H4'" H N N 521 U "H3'" H N N 522 U "HO3'" H N N 523 U "H2'" H N N 524 U "HO2'" H N N 525 U "H1'" H N N 526 U H3 H N N 527 U H5 H N N 528 U H6 H N N 529 VAL N N N N 530 VAL CA C N S 531 VAL C C N N 532 VAL O O N N 533 VAL CB C N N 534 VAL CG1 C N N 535 VAL CG2 C N N 536 VAL OXT O N N 537 VAL H H N N 538 VAL H2 H N N 539 VAL HA H N N 540 VAL HB H N N 541 VAL HG11 H N N 542 VAL HG12 H N N 543 VAL HG13 H N N 544 VAL HG21 H N N 545 VAL HG22 H N N 546 VAL HG23 H N N 547 VAL HXT H N N 548 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 GOL C1 O1 sing N N 244 GOL C1 C2 sing N N 245 GOL C1 H11 sing N N 246 GOL C1 H12 sing N N 247 GOL O1 HO1 sing N N 248 GOL C2 O2 sing N N 249 GOL C2 C3 sing N N 250 GOL C2 H2 sing N N 251 GOL O2 HO2 sing N N 252 GOL C3 O3 sing N N 253 GOL C3 H31 sing N N 254 GOL C3 H32 sing N N 255 GOL O3 HO3 sing N N 256 HIS N CA sing N N 257 HIS N H sing N N 258 HIS N H2 sing N N 259 HIS CA C sing N N 260 HIS CA CB sing N N 261 HIS CA HA sing N N 262 HIS C O doub N N 263 HIS C OXT sing N N 264 HIS CB CG sing N N 265 HIS CB HB2 sing N N 266 HIS CB HB3 sing N N 267 HIS CG ND1 sing Y N 268 HIS CG CD2 doub Y N 269 HIS ND1 CE1 doub Y N 270 HIS ND1 HD1 sing N N 271 HIS CD2 NE2 sing Y N 272 HIS CD2 HD2 sing N N 273 HIS CE1 NE2 sing Y N 274 HIS CE1 HE1 sing N N 275 HIS NE2 HE2 sing N N 276 HIS OXT HXT sing N N 277 HOH O H1 sing N N 278 HOH O H2 sing N N 279 ILE N CA sing N N 280 ILE N H sing N N 281 ILE N H2 sing N N 282 ILE CA C sing N N 283 ILE CA CB sing N N 284 ILE CA HA sing N N 285 ILE C O doub N N 286 ILE C OXT sing N N 287 ILE CB CG1 sing N N 288 ILE CB CG2 sing N N 289 ILE CB HB sing N N 290 ILE CG1 CD1 sing N N 291 ILE CG1 HG12 sing N N 292 ILE CG1 HG13 sing N N 293 ILE CG2 HG21 sing N N 294 ILE CG2 HG22 sing N N 295 ILE CG2 HG23 sing N N 296 ILE CD1 HD11 sing N N 297 ILE CD1 HD12 sing N N 298 ILE CD1 HD13 sing N N 299 ILE OXT HXT sing N N 300 LEU N CA sing N N 301 LEU N H sing N N 302 LEU N H2 sing N N 303 LEU CA C sing N N 304 LEU CA CB sing N N 305 LEU CA HA sing N N 306 LEU C O doub N N 307 LEU C OXT sing N N 308 LEU CB CG sing N N 309 LEU CB HB2 sing N N 310 LEU CB HB3 sing N N 311 LEU CG CD1 sing N N 312 LEU CG CD2 sing N N 313 LEU CG HG sing N N 314 LEU CD1 HD11 sing N N 315 LEU CD1 HD12 sing N N 316 LEU CD1 HD13 sing N N 317 LEU CD2 HD21 sing N N 318 LEU CD2 HD22 sing N N 319 LEU CD2 HD23 sing N N 320 LEU OXT HXT sing N N 321 LYS N CA sing N N 322 LYS N H sing N N 323 LYS N H2 sing N N 324 LYS CA C sing N N 325 LYS CA CB sing N N 326 LYS CA HA sing N N 327 LYS C O doub N N 328 LYS C OXT sing N N 329 LYS CB CG sing N N 330 LYS CB HB2 sing N N 331 LYS CB HB3 sing N N 332 LYS CG CD sing N N 333 LYS CG HG2 sing N N 334 LYS CG HG3 sing N N 335 LYS CD CE sing N N 336 LYS CD HD2 sing N N 337 LYS CD HD3 sing N N 338 LYS CE NZ sing N N 339 LYS CE HE2 sing N N 340 LYS CE HE3 sing N N 341 LYS NZ HZ1 sing N N 342 LYS NZ HZ2 sing N N 343 LYS NZ HZ3 sing N N 344 LYS OXT HXT sing N N 345 MET N CA sing N N 346 MET N H sing N N 347 MET N H2 sing N N 348 MET CA C sing N N 349 MET CA CB sing N N 350 MET CA HA sing N N 351 MET C O doub N N 352 MET C OXT sing N N 353 MET CB CG sing N N 354 MET CB HB2 sing N N 355 MET CB HB3 sing N N 356 MET CG SD sing N N 357 MET CG HG2 sing N N 358 MET CG HG3 sing N N 359 MET SD CE sing N N 360 MET CE HE1 sing N N 361 MET CE HE2 sing N N 362 MET CE HE3 sing N N 363 MET OXT HXT sing N N 364 PHE N CA sing N N 365 PHE N H sing N N 366 PHE N H2 sing N N 367 PHE CA C sing N N 368 PHE CA CB sing N N 369 PHE CA HA sing N N 370 PHE C O doub N N 371 PHE C OXT sing N N 372 PHE CB CG sing N N 373 PHE CB HB2 sing N N 374 PHE CB HB3 sing N N 375 PHE CG CD1 doub Y N 376 PHE CG CD2 sing Y N 377 PHE CD1 CE1 sing Y N 378 PHE CD1 HD1 sing N N 379 PHE CD2 CE2 doub Y N 380 PHE CD2 HD2 sing N N 381 PHE CE1 CZ doub Y N 382 PHE CE1 HE1 sing N N 383 PHE CE2 CZ sing Y N 384 PHE CE2 HE2 sing N N 385 PHE CZ HZ sing N N 386 PHE OXT HXT sing N N 387 PRO N CA sing N N 388 PRO N CD sing N N 389 PRO N H sing N N 390 PRO CA C sing N N 391 PRO CA CB sing N N 392 PRO CA HA sing N N 393 PRO C O doub N N 394 PRO C OXT sing N N 395 PRO CB CG sing N N 396 PRO CB HB2 sing N N 397 PRO CB HB3 sing N N 398 PRO CG CD sing N N 399 PRO CG HG2 sing N N 400 PRO CG HG3 sing N N 401 PRO CD HD2 sing N N 402 PRO CD HD3 sing N N 403 PRO OXT HXT sing N N 404 SER N CA sing N N 405 SER N H sing N N 406 SER N H2 sing N N 407 SER CA C sing N N 408 SER CA CB sing N N 409 SER CA HA sing N N 410 SER C O doub N N 411 SER C OXT sing N N 412 SER CB OG sing N N 413 SER CB HB2 sing N N 414 SER CB HB3 sing N N 415 SER OG HG sing N N 416 SER OXT HXT sing N N 417 THR N CA sing N N 418 THR N H sing N N 419 THR N H2 sing N N 420 THR CA C sing N N 421 THR CA CB sing N N 422 THR CA HA sing N N 423 THR C O doub N N 424 THR C OXT sing N N 425 THR CB OG1 sing N N 426 THR CB CG2 sing N N 427 THR CB HB sing N N 428 THR OG1 HG1 sing N N 429 THR CG2 HG21 sing N N 430 THR CG2 HG22 sing N N 431 THR CG2 HG23 sing N N 432 THR OXT HXT sing N N 433 TRP N CA sing N N 434 TRP N H sing N N 435 TRP N H2 sing N N 436 TRP CA C sing N N 437 TRP CA CB sing N N 438 TRP CA HA sing N N 439 TRP C O doub N N 440 TRP C OXT sing N N 441 TRP CB CG sing N N 442 TRP CB HB2 sing N N 443 TRP CB HB3 sing N N 444 TRP CG CD1 doub Y N 445 TRP CG CD2 sing Y N 446 TRP CD1 NE1 sing Y N 447 TRP CD1 HD1 sing N N 448 TRP CD2 CE2 doub Y N 449 TRP CD2 CE3 sing Y N 450 TRP NE1 CE2 sing Y N 451 TRP NE1 HE1 sing N N 452 TRP CE2 CZ2 sing Y N 453 TRP CE3 CZ3 doub Y N 454 TRP CE3 HE3 sing N N 455 TRP CZ2 CH2 doub Y N 456 TRP CZ2 HZ2 sing N N 457 TRP CZ3 CH2 sing Y N 458 TRP CZ3 HZ3 sing N N 459 TRP CH2 HH2 sing N N 460 TRP OXT HXT sing N N 461 TYR N CA sing N N 462 TYR N H sing N N 463 TYR N H2 sing N N 464 TYR CA C sing N N 465 TYR CA CB sing N N 466 TYR CA HA sing N N 467 TYR C O doub N N 468 TYR C OXT sing N N 469 TYR CB CG sing N N 470 TYR CB HB2 sing N N 471 TYR CB HB3 sing N N 472 TYR CG CD1 doub Y N 473 TYR CG CD2 sing Y N 474 TYR CD1 CE1 sing Y N 475 TYR CD1 HD1 sing N N 476 TYR CD2 CE2 doub Y N 477 TYR CD2 HD2 sing N N 478 TYR CE1 CZ doub Y N 479 TYR CE1 HE1 sing N N 480 TYR CE2 CZ sing Y N 481 TYR CE2 HE2 sing N N 482 TYR CZ OH sing N N 483 TYR OH HH sing N N 484 TYR OXT HXT sing N N 485 U OP3 P sing N N 486 U OP3 HOP3 sing N N 487 U P OP1 doub N N 488 U P OP2 sing N N 489 U P "O5'" sing N N 490 U OP2 HOP2 sing N N 491 U "O5'" "C5'" sing N N 492 U "C5'" "C4'" sing N N 493 U "C5'" "H5'" sing N N 494 U "C5'" "H5''" sing N N 495 U "C4'" "O4'" sing N N 496 U "C4'" "C3'" sing N N 497 U "C4'" "H4'" sing N N 498 U "O4'" "C1'" sing N N 499 U "C3'" "O3'" sing N N 500 U "C3'" "C2'" sing N N 501 U "C3'" "H3'" sing N N 502 U "O3'" "HO3'" sing N N 503 U "C2'" "O2'" sing N N 504 U "C2'" "C1'" sing N N 505 U "C2'" "H2'" sing N N 506 U "O2'" "HO2'" sing N N 507 U "C1'" N1 sing N N 508 U "C1'" "H1'" sing N N 509 U N1 C2 sing N N 510 U N1 C6 sing N N 511 U C2 O2 doub N N 512 U C2 N3 sing N N 513 U N3 C4 sing N N 514 U N3 H3 sing N N 515 U C4 O4 doub N N 516 U C4 C5 sing N N 517 U C5 C6 doub N N 518 U C5 H5 sing N N 519 U C6 H6 sing N N 520 VAL N CA sing N N 521 VAL N H sing N N 522 VAL N H2 sing N N 523 VAL CA C sing N N 524 VAL CA CB sing N N 525 VAL CA HA sing N N 526 VAL C O doub N N 527 VAL C OXT sing N N 528 VAL CB CG1 sing N N 529 VAL CB CG2 sing N N 530 VAL CB HB sing N N 531 VAL CG1 HG11 sing N N 532 VAL CG1 HG12 sing N N 533 VAL CG1 HG13 sing N N 534 VAL CG2 HG21 sing N N 535 VAL CG2 HG22 sing N N 536 VAL CG2 HG23 sing N N 537 VAL OXT HXT sing N N 538 # _ndb_struct_conf_na.entry_id 4ZLD _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B A 2 1_555 B U 16 1_555 0.064 -0.090 0.160 6.170 -12.359 2.249 1 B_A2:U16_B B 2 ? B 16 ? 20 1 1 B A 3 1_555 B U 15 1_555 0.048 -0.125 0.062 9.717 -14.449 -3.133 2 B_A3:U15_B B 3 ? B 15 ? 20 1 1 B C 4 1_555 B G 14 1_555 0.170 -0.098 -0.055 10.301 -17.846 1.005 3 B_C4:G14_B B 4 ? B 14 ? 19 1 1 B U 5 1_555 B A 13 1_555 -0.165 -0.122 0.097 1.850 -9.785 0.102 4 B_U5:A13_B B 5 ? B 13 ? 20 1 1 B U 6 1_555 B A 12 1_555 -0.013 -0.110 -0.210 17.557 -7.818 1.107 5 B_U6:A12_B B 6 ? B 12 ? 20 1 1 B C 7 1_555 B G 11 1_555 0.322 -0.014 -0.366 26.471 -9.596 1.357 6 B_C7:G11_B B 7 ? B 11 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B A 2 1_555 B U 16 1_555 B A 3 1_555 B U 15 1_555 -1.144 -1.496 3.091 -1.981 5.651 32.941 -3.453 1.686 2.864 9.864 3.458 33.466 1 BB_A2A3:U15U16_BB B 2 ? B 16 ? B 3 ? B 15 ? 1 B A 3 1_555 B U 15 1_555 B C 4 1_555 B G 14 1_555 0.552 -1.575 3.180 0.638 6.278 32.098 -3.807 -0.877 2.839 11.218 -1.140 32.697 2 BB_A3C4:G14U15_BB B 3 ? B 15 ? B 4 ? B 14 ? 1 B C 4 1_555 B G 14 1_555 B U 5 1_555 B A 13 1_555 -0.526 -1.862 3.355 -5.131 10.228 31.544 -4.835 0.107 2.688 18.086 9.074 33.506 3 BB_C4U5:A13G14_BB B 4 ? B 14 ? B 5 ? B 13 ? 1 B U 5 1_555 B A 13 1_555 B U 6 1_555 B A 12 1_555 -0.469 -1.126 2.879 -1.299 2.793 30.841 -2.575 0.661 2.786 5.236 2.435 30.990 4 BB_U5U6:A12A13_BB B 5 ? B 13 ? B 6 ? B 12 ? 1 B U 6 1_555 B A 12 1_555 B C 7 1_555 B G 11 1_555 -0.049 -1.835 3.110 -2.455 11.020 26.952 -5.671 -0.355 2.201 22.434 4.998 29.181 5 BB_U6C7:G11A12_BB B 6 ? B 12 ? B 7 ? B 11 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science KAKENHI' Japan 26711002 1 'Japan Society for the Promotion of Science KAKENHI' Japan 25291010 2 # _atom_sites.entry_id 4ZLD _atom_sites.fract_transf_matrix[1][1] 0.016882 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011117 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011816 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_