HEADER TRANSFERASE 04-MAY-15 4ZND TITLE 2.55 ANGSTROM RESOLUTION STRUCTURE OF 3-PHOSPHOSHIKIMATE 1- TITLE 2 CARBOXYVINYLTRANSFERASE (AROA) FROM COXIELLA BURNETII IN COMPLEX WITH TITLE 3 SHIKIMATE-3-PHOSPHATE, PHOSPHATE, AND POTASSIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE SYNTHASE,EPSPS; COMPND 5 EC: 2.5.1.19; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COXIELLA BURNETII (STRAIN RSA 493 / NINE MILE SOURCE 3 PHASE I); SOURCE 4 ORGANISM_TAXID: 227377; SOURCE 5 STRAIN: RSA 493 / NINE MILE PHASE I; SOURCE 6 GENE: AROA, CBU_0526; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE ACTIVITY, TRANSFERASE, KEYWDS 2 STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 3 DISEASES, CSGID EXPDTA X-RAY DIFFRACTION AUTHOR S.H.LIGHT,G.MINASOV,S.N.KRISHNA,K.KWON,W.F.ANDERSON,CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 2 27-SEP-23 4ZND 1 SOURCE REMARK REVDAT 1 13-MAY-15 4ZND 0 JRNL AUTH S.H.LIGHT,G.MINASOV,S.N.KRISHNA,K.KWON,W.F.ANDERSON JRNL TITL 2.55 ANGSTROM RESOLUTION STRUCTURE OF 3-PHOSPHOSHIKIMATE JRNL TITL 2 1-CARBOXYVINYLTRANSFERASE (AROA) FROM COXIELLA BURNETII IN JRNL TITL 3 COMPLEX WITH SHIKIMATE-3-PHOSPHATE, PHOSPHATE, AND POTASSIUM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0107 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 19891 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1429 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3236 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 82 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.45000 REMARK 3 B22 (A**2) : 0.45000 REMARK 3 B33 (A**2) : -1.48000 REMARK 3 B12 (A**2) : 0.23000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.309 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.254 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.188 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.838 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3311 ; 0.020 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4490 ; 2.007 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 435 ; 7.366 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 125 ;39.161 ;24.560 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 571 ;17.800 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;21.887 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 533 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2433 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1743 ; 3.947 ; 4.146 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2177 ; 5.542 ; 6.205 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1568 ; 5.835 ; 4.526 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4821 ; 9.966 ;18.968 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 121 REMARK 3 ORIGIN FOR THE GROUP (A): -5.7887 35.8831 -4.7662 REMARK 3 T TENSOR REMARK 3 T11: 0.0109 T22: 0.2673 REMARK 3 T33: 0.0617 T12: -0.0264 REMARK 3 T13: 0.0083 T23: 0.0435 REMARK 3 L TENSOR REMARK 3 L11: 1.7983 L22: 0.7241 REMARK 3 L33: 1.2759 L12: -0.5014 REMARK 3 L13: -0.2868 L23: -0.5606 REMARK 3 S TENSOR REMARK 3 S11: -0.0078 S12: 0.0424 S13: -0.0227 REMARK 3 S21: -0.0311 S22: 0.0806 S23: 0.0937 REMARK 3 S31: 0.0868 S32: -0.3668 S33: -0.0727 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 122 A 199 REMARK 3 ORIGIN FOR THE GROUP (A): -9.3092 30.4794 -22.4561 REMARK 3 T TENSOR REMARK 3 T11: 0.2477 T22: 0.4631 REMARK 3 T33: 0.0357 T12: -0.0772 REMARK 3 T13: -0.0584 T23: -0.0302 REMARK 3 L TENSOR REMARK 3 L11: 1.7344 L22: 1.2057 REMARK 3 L33: 2.7717 L12: -0.0115 REMARK 3 L13: -0.4758 L23: -0.3527 REMARK 3 S TENSOR REMARK 3 S11: 0.0277 S12: 0.5037 S13: -0.0854 REMARK 3 S21: -0.4931 S22: 0.0005 S23: 0.1072 REMARK 3 S31: 0.4217 S32: -0.5133 S33: -0.0282 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 200 A 228 REMARK 3 ORIGIN FOR THE GROUP (A): -15.8957 19.5023 -11.6590 REMARK 3 T TENSOR REMARK 3 T11: 0.2795 T22: 0.4107 REMARK 3 T33: 0.3087 T12: -0.1807 REMARK 3 T13: 0.0475 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 1.0838 L22: 2.5455 REMARK 3 L33: 7.5498 L12: 0.3559 REMARK 3 L13: 1.3904 L23: 0.7429 REMARK 3 S TENSOR REMARK 3 S11: -0.0689 S12: 0.2060 S13: -0.3451 REMARK 3 S21: 0.0367 S22: -0.0661 S23: 0.2338 REMARK 3 S31: 0.9817 S32: 0.0392 S33: 0.1350 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 229 A 279 REMARK 3 ORIGIN FOR THE GROUP (A): 11.4570 19.1082 -2.3324 REMARK 3 T TENSOR REMARK 3 T11: 0.2151 T22: 0.1342 REMARK 3 T33: 0.1477 T12: 0.0255 REMARK 3 T13: 0.0545 T23: 0.0568 REMARK 3 L TENSOR REMARK 3 L11: 2.0471 L22: 2.0201 REMARK 3 L33: 1.0704 L12: 0.4423 REMARK 3 L13: -0.2728 L23: -0.5431 REMARK 3 S TENSOR REMARK 3 S11: -0.0763 S12: -0.1613 S13: -0.3693 REMARK 3 S21: 0.0216 S22: -0.0655 S23: -0.0558 REMARK 3 S31: 0.4386 S32: 0.0871 S33: 0.1418 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 280 A 288 REMARK 3 ORIGIN FOR THE GROUP (A): -2.4098 13.9225 0.9452 REMARK 3 T TENSOR REMARK 3 T11: 0.1369 T22: 0.1455 REMARK 3 T33: 0.2187 T12: -0.0836 REMARK 3 T13: 0.0592 T23: 0.0231 REMARK 3 L TENSOR REMARK 3 L11: 13.0103 L22: 0.9406 REMARK 3 L33: 5.5452 L12: -1.6016 REMARK 3 L13: 4.5832 L23: 1.1377 REMARK 3 S TENSOR REMARK 3 S11: -0.0929 S12: -0.4361 S13: -0.4750 REMARK 3 S21: 0.1816 S22: -0.0586 S23: 0.2145 REMARK 3 S31: 0.3259 S32: -0.4346 S33: 0.1515 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 289 A 336 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5518 19.5357 -11.4491 REMARK 3 T TENSOR REMARK 3 T11: 0.2798 T22: 0.1439 REMARK 3 T33: 0.1867 T12: 0.0681 REMARK 3 T13: 0.0872 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 1.8209 L22: 0.9761 REMARK 3 L33: 2.5396 L12: -0.3181 REMARK 3 L13: 0.2514 L23: -0.6804 REMARK 3 S TENSOR REMARK 3 S11: -0.0516 S12: 0.1667 S13: -0.4215 REMARK 3 S21: -0.2340 S22: -0.0622 S23: -0.0936 REMARK 3 S31: 0.6492 S32: 0.0337 S33: 0.1138 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 337 A 405 REMARK 3 ORIGIN FOR THE GROUP (A): 20.4072 33.0981 -12.5977 REMARK 3 T TENSOR REMARK 3 T11: 0.0741 T22: 0.2030 REMARK 3 T33: 0.0988 T12: 0.0575 REMARK 3 T13: 0.0586 T23: 0.0474 REMARK 3 L TENSOR REMARK 3 L11: 1.0803 L22: 1.0229 REMARK 3 L33: 2.3656 L12: 0.1600 REMARK 3 L13: 0.8009 L23: 0.1474 REMARK 3 S TENSOR REMARK 3 S11: 0.0523 S12: -0.0204 S13: -0.0002 REMARK 3 S21: -0.2038 S22: -0.0260 S23: -0.1232 REMARK 3 S31: 0.1241 S32: 0.1165 S33: -0.0262 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 406 A 435 REMARK 3 ORIGIN FOR THE GROUP (A): 14.0000 37.9563 1.7371 REMARK 3 T TENSOR REMARK 3 T11: 0.0766 T22: 0.2598 REMARK 3 T33: 0.1208 T12: 0.0262 REMARK 3 T13: 0.0214 T23: -0.0228 REMARK 3 L TENSOR REMARK 3 L11: 3.5118 L22: 1.5886 REMARK 3 L33: 1.8163 L12: -0.4573 REMARK 3 L13: 1.3583 L23: -1.2891 REMARK 3 S TENSOR REMARK 3 S11: -0.0553 S12: -0.2006 S13: 0.2520 REMARK 3 S21: 0.1243 S22: -0.0396 S23: -0.0264 REMARK 3 S31: 0.0420 S32: -0.0130 S33: 0.0949 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4ZND COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209573. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97850 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21004 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.53800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3SLH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 7.5 MG/ML, 0.25 M REMARK 280 NACL, 0.01 M TRIS-HCL PH 8.3 CRYSTALLIZATION CONDITION: CLASSICS REMARK 280 II F8 (QIAGEN): 0.2 M AMMONIUM SULFATE, 0.1 M HEPES PH 7.5, 25% REMARK 280 (W/V) PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.88933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 155.77867 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 116.83400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 194.72333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 38.94467 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 77.88933 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 155.77867 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 194.72333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 116.83400 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 38.94467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 GLY A 436 REMARK 465 GLY A 437 REMARK 465 PHE A 438 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 2 CB - CG - OD1 ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG A 99 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 109 46.63 -83.23 REMARK 500 ASP A 211 -75.88 -127.58 REMARK 500 LYS A 212 -97.62 -122.94 REMARK 500 GLU A 287 -6.18 81.00 REMARK 500 ASP A 335 42.15 39.62 REMARK 500 LYS A 342 -158.05 -79.95 REMARK 500 ASN A 407 84.34 63.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 504 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 48 OD2 REMARK 620 2 ASN A 93 O 93.8 REMARK 620 3 ASN A 93 OD1 103.1 68.1 REMARK 620 4 GLU A 343 OE2 138.1 126.9 101.6 REMARK 620 5 PO4 A 502 O3 103.9 73.1 133.6 82.1 REMARK 620 6 PO4 A 502 O4 92.5 121.6 161.4 59.7 49.2 REMARK 620 7 HOH A 631 O 56.5 142.9 95.3 87.9 131.0 84.6 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue S3P A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BME A 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP01842 RELATED DB: TARGETTRACK DBREF 4ZND A 1 438 UNP Q83E11 AROA_COXBU 1 438 SEQADV 4ZND SER A -2 UNP Q83E11 EXPRESSION TAG SEQADV 4ZND ASN A -1 UNP Q83E11 EXPRESSION TAG SEQADV 4ZND ALA A 0 UNP Q83E11 EXPRESSION TAG SEQRES 1 A 441 SER ASN ALA MET ASP TYR GLN THR ILE PRO SER GLN GLY SEQRES 2 A 441 LEU SER GLY GLU ILE CYS VAL PRO GLY ASP LYS SER ILE SEQRES 3 A 441 SER HIS ARG ALA VAL LEU LEU ALA ALA ILE ALA GLU GLY SEQRES 4 A 441 GLN THR GLN VAL ASP GLY PHE LEU MET GLY ALA ASP ASN SEQRES 5 A 441 LEU ALA MET VAL SER ALA LEU GLN GLN MET GLY ALA SER SEQRES 6 A 441 ILE GLN VAL ILE GLU ASP GLU ASN ILE LEU VAL VAL GLU SEQRES 7 A 441 GLY VAL GLY MET THR GLY LEU GLN ALA PRO PRO GLU ALA SEQRES 8 A 441 LEU ASP CYS GLY ASN SER GLY THR ALA ILE ARG LEU LEU SEQRES 9 A 441 SER GLY LEU LEU ALA GLY GLN PRO PHE ASN THR VAL LEU SEQRES 10 A 441 THR GLY ASP SER SER LEU GLN ARG ARG PRO MET LYS ARG SEQRES 11 A 441 ILE ILE ASP PRO LEU THR LEU MET GLY ALA LYS ILE ASP SEQRES 12 A 441 SER THR GLY ASN VAL PRO PRO LEU LYS ILE TYR GLY ASN SEQRES 13 A 441 PRO ARG LEU THR GLY ILE HIS TYR GLN LEU PRO MET ALA SEQRES 14 A 441 SER ALA GLN VAL LYS SER CYS LEU LEU LEU ALA GLY LEU SEQRES 15 A 441 TYR ALA ARG GLY LYS THR CYS ILE THR GLU PRO ALA PRO SEQRES 16 A 441 SER ARG ASP HIS THR GLU ARG LEU LEU LYS HIS PHE HIS SEQRES 17 A 441 TYR THR LEU GLN LYS ASP LYS GLN SER ILE CYS VAL SER SEQRES 18 A 441 GLY GLY GLY LYS LEU LYS ALA ASN ASP ILE SER ILE PRO SEQRES 19 A 441 GLY ASP ILE SER SER ALA ALA PHE PHE ILE VAL ALA ALA SEQRES 20 A 441 THR ILE THR PRO GLY SER ALA ILE ARG LEU CYS ARG VAL SEQRES 21 A 441 GLY VAL ASN PRO THR ARG LEU GLY VAL ILE ASN LEU LEU SEQRES 22 A 441 LYS MET MET GLY ALA ASP ILE GLU VAL THR HIS TYR THR SEQRES 23 A 441 GLU LYS ASN GLU GLU PRO THR ALA ASP ILE THR VAL ARG SEQRES 24 A 441 HIS ALA ARG LEU LYS GLY ILE ASP ILE PRO PRO ASP GLN SEQRES 25 A 441 VAL PRO LEU THR ILE ASP GLU PHE PRO VAL LEU LEU ILE SEQRES 26 A 441 ALA ALA ALA VAL ALA GLN GLY LYS THR VAL LEU ARG ASP SEQRES 27 A 441 ALA ALA GLU LEU ARG VAL LYS GLU THR ASP ARG ILE ALA SEQRES 28 A 441 ALA MET VAL ASP GLY LEU GLN LYS LEU GLY ILE ALA ALA SEQRES 29 A 441 GLU SER LEU PRO ASP GLY VAL ILE ILE GLN GLY GLY THR SEQRES 30 A 441 LEU GLU GLY GLY GLU VAL ASN SER TYR ASP ASP HIS ARG SEQRES 31 A 441 ILE ALA MET ALA PHE ALA VAL ALA GLY THR LEU ALA LYS SEQRES 32 A 441 GLY PRO VAL ARG ILE ARG ASN CYS ASP ASN VAL LYS THR SEQRES 33 A 441 SER PHE PRO ASN PHE VAL GLU LEU ALA ASN GLU VAL GLY SEQRES 34 A 441 MET ASN VAL LYS GLY VAL ARG GLY ARG GLY GLY PHE HET S3P A 501 16 HET PO4 A 502 5 HET PO4 A 503 5 HET K A 504 1 HET BME A 505 4 HETNAM S3P SHIKIMATE-3-PHOSPHATE HETNAM PO4 PHOSPHATE ION HETNAM K POTASSIUM ION HETNAM BME BETA-MERCAPTOETHANOL FORMUL 2 S3P C7 H11 O8 P FORMUL 3 PO4 2(O4 P 3-) FORMUL 5 K K 1+ FORMUL 6 BME C2 H6 O S FORMUL 7 HOH *82(H2 O) HELIX 1 AA1 ASP A 20 ALA A 34 1 15 HELIX 2 AA2 GLY A 46 MET A 59 1 14 HELIX 3 AA3 GLU A 67 ASN A 70 5 4 HELIX 4 AA4 SER A 94 ALA A 106 1 13 HELIX 5 AA5 SER A 119 ARG A 123 5 5 HELIX 6 AA6 MET A 125 MET A 135 1 11 HELIX 7 AA7 SER A 167 LEU A 179 1 13 HELIX 8 AA8 ASP A 195 PHE A 204 1 10 HELIX 9 AA9 ASP A 233 THR A 247 1 15 HELIX 10 AB1 ASN A 260 ARG A 263 5 4 HELIX 11 AB2 LEU A 264 MET A 273 1 10 HELIX 12 AB3 PRO A 306 ASP A 315 5 10 HELIX 13 AB4 GLU A 316 ALA A 327 1 12 HELIX 14 AB5 ALA A 336 LYS A 342 5 7 HELIX 15 AB6 ASP A 345 LEU A 357 1 13 HELIX 16 AB7 ASP A 385 GLY A 396 1 12 HELIX 17 AB8 CYS A 408 SER A 414 5 7 HELIX 18 AB9 ASN A 417 VAL A 425 1 9 SHEET 1 AA1 4 GLY A 378 ASN A 381 0 SHEET 2 AA1 4 VAL A 403 ARG A 406 1 O ARG A 404 N VAL A 380 SHEET 3 AA1 4 MET A 1 THR A 5 -1 N THR A 5 O VAL A 403 SHEET 4 AA1 4 VAL A 429 ARG A 433 -1 O VAL A 432 N ASP A 2 SHEET 1 AA2 4 SER A 12 ILE A 15 0 SHEET 2 AA2 4 ALA A 251 GLY A 258 1 O CYS A 255 N ILE A 15 SHEET 3 AA2 4 GLU A 288 ARG A 296 -1 O ILE A 293 N LEU A 254 SHEET 4 AA2 4 ASP A 276 LYS A 285 -1 N THR A 280 O ASP A 292 SHEET 1 AA3 4 SER A 62 ILE A 66 0 SHEET 2 AA3 4 ILE A 71 GLU A 75 -1 O GLU A 75 N SER A 62 SHEET 3 AA3 4 GLN A 37 ASP A 41 -1 N VAL A 40 O LEU A 72 SHEET 4 AA3 4 ILE A 228 SER A 229 1 O ILE A 228 N ASP A 41 SHEET 1 AA4 4 LEU A 89 ASP A 90 0 SHEET 2 AA4 4 ASN A 111 THR A 115 1 O VAL A 113 N LEU A 89 SHEET 3 AA4 4 LEU A 148 TYR A 151 -1 O ILE A 150 N THR A 112 SHEET 4 AA4 4 LYS A 138 ASP A 140 -1 N ASP A 140 O LYS A 149 SHEET 1 AA5 4 HIS A 160 GLN A 162 0 SHEET 2 AA5 4 LYS A 184 THR A 188 1 O CYS A 186 N TYR A 161 SHEET 3 AA5 4 SER A 214 SER A 218 -1 O VAL A 217 N THR A 185 SHEET 4 AA5 4 GLN A 209 LYS A 210 -1 N GLN A 209 O CYS A 216 SHEET 1 AA6 3 LYS A 330 LEU A 333 0 SHEET 2 AA6 3 GLY A 367 GLN A 371 -1 O ILE A 370 N THR A 331 SHEET 3 AA6 3 ALA A 360 LEU A 364 -1 N ALA A 360 O GLN A 371 SSBOND 1 CYS A 186 CYS A 216 1555 1555 2.07 LINK OD2 ASP A 48 K K A 504 1555 1555 2.85 LINK O ASN A 93 K K A 504 1555 1555 2.74 LINK OD1 ASN A 93 K K A 504 1555 1555 2.64 LINK OE2 GLU A 343 K K A 504 1555 1555 2.70 LINK O3 PO4 A 502 K K A 504 1555 1555 2.78 LINK O4 PO4 A 502 K K A 504 1555 1555 2.98 LINK K K A 504 O HOH A 631 1555 1555 2.96 CISPEP 1 PRO A 146 PRO A 147 0 1.69 SITE 1 AC1 13 SER A 22 ARG A 26 THR A 96 SER A 167 SITE 2 AC1 13 ALA A 168 GLN A 169 ARG A 194 ASP A 315 SITE 3 AC1 13 LYS A 342 PO4 A 502 HOH A 603 HOH A 610 SITE 4 AC1 13 HOH A 625 SITE 1 AC2 11 LYS A 21 ASN A 93 SER A 94 GLY A 95 SITE 2 AC2 11 THR A 96 ARG A 123 GLN A 169 GLU A 343 SITE 3 AC2 11 S3P A 501 K A 504 HOH A 605 SITE 1 AC3 3 PRO A 124 LYS A 126 ARG A 127 SITE 1 AC4 5 ASP A 48 ASN A 93 GLU A 343 PO4 A 502 SITE 2 AC4 5 HOH A 631 SITE 1 AC5 3 GLU A 14 CYS A 255 ASP A 292 CRYST1 94.795 94.795 233.668 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010549 0.006091 0.000000 0.00000 SCALE2 0.000000 0.012181 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004280 0.00000